DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
TRIM15 | hsa-miR-1274b | beg:100 | end:118 | pic:3' ACCGCGGGCTTGTCCCT 5'& |||| ||||||||. &5' -GGCGAGAGAACAGGGG 3' |
TRIM15 | hsa-miR-2117 | beg:100 | end:115 | pic:3' GACAGGAACCGTTTCTCTTGT 5'& ||| .|||||||| &5' --------GGC-GAGAGAACA 3' |
TRIM15 | hsa-miR-920 | beg:160 | end:177 | pic:3' ATGACGAAGGTGTCGAGGGG 5'& || || ||||||||. &5' ----GC--CCTCAGCTCCCT 3' |
TRIM15 | bkv-miR-B1-5p | beg:205 | end:225 | pic:3' TACGAGAAGGGTTCA-GAGTCTA 5'& || ||||.| |||||| &5' --GC-CTTCTCTGTACCTCAGA- 3' |
TRIM15 | hsv1-miR-H8star | beg:66 | end:86 | pic:3' ATATATGTCCCTGGCCCCCG 5'& .|.|.|.| |||||||| &5' -GTGTGCGGC--CCGGGGGC 3' |
TRIM15 | hiv1-miR-H1 | beg:177 | end:196 | pic:3' CGGGTCCGTGCGGAGGGACC 5'& |.|| | ||||||||| &5' GTCCT-GA--GCCTCCCTG- 3' |
TRIM15 | hsa-miR-4270 | beg:185 | end:207 | pic:3' CGGGAGGGG-ACTGAGGGACT 5'& ||||||. |||| |.|||. &5' --CCTCCCTGTGACGCTCTGG 3' |
TRIM15 | hiv1-miR-H1 | beg:73 | end:92 | pic:3' CGGGTCCGTGCGGAGGGACC 5'& ||||.|| | ||||||| &5' GCCCGGG---GGCTCCCTG- 3' |
TRIM15 | hsa-miR-24 | beg:171 | end:190 | pic:3' GACAAGGACGACTTGACTCGGT 5'& |||| | ||||||| &5' -----CCTGACGTCCTGAGCC- 3' |
TRIM15 | ebv-miR-BART18-5p | beg:104 | end:125 | pic:3' ACATATC-CTTCACGCTTGAACT 5'& || ||| | |.|||||| &5' -----AGAGAACAGGGGACTTGA 3' |
TRIM15 | hsa-miR-4273 | beg:104 | end:115 | pic:3' GACAGGTAGTCTCTTGTG 5'& |||||||| &5' ---------AGAGAACA- 3' |
TRIM15 | hsa-miR-340star | beg:22 | end:36 | pic:3' CGATATTTCATTGACTCTGCCT 5'& |.| ||||||| &5' ----------AGCGGAGACGG- 3' |
TRIM15 | hsa-miR-744star | beg:247 | end:267 | pic:3' TCCAACTCCAATCACCGTTGTC 5'& || | ||| |||||||| &5' ----TGTGCCTAG-GGCAACAG 3' |
TRIM15 | hsa-let-7f | beg:200 | end:223 | pic:3' TTGATATGTT-AGATGATGGAGT 5'& ||. | |||. ||||||| &5' --CTGGCCTTCTCTG-TACCTCA 3' |
TRIM15 | hsa-miR-1203 | beg:189 | end:207 | pic:3' CTCGACGTAGGAC----CGAGGCCC 5'& |||| ||||.|| &5' ---------CCTGTGACGCTCTGG- 3' |
TRIM15 | hsa-miR-1203 | beg:233 | end:247 | pic:3' CTCGACGTAGGACCGAGGCCC 5'& || | ||||.||| &5' ------CAGAC-GGCTTCGG- 3' |
TRIM15 | hsa-miR-1225-3p | beg:66 | end:88 | pic:3' GACCCCCGCCGTGTCCCCGAGT 5'& | | ||||| |.||||||| &5' --GTGTGCGGCCCGGGGGCTC- 3' |
TRIM15 | hsa-miR-1225-5p | beg:74 | end:99 | pic:3' GGGGGGTGACCCGG----CATGGGTG 5'& |||. ||||. ||.|||.| &5' ---CCCGG-GGGCTCCCTGTGCCCGC 3' |
TRIM15 | hsa-miR-1249 | beg:1 | end:21 | pic:3' ACTTCTTCCCC-C-C-CTTCCCGCA 5'& |||| | | |||||||| &5' -------GGGGCGCGCGAAGGGCG- 3' |
TRIM15 | hsa-miR-125a-5p | beg:281 | end:297 | pic:3' AGTGTCCAATTTCCC-AGAGTCCCT 5'& ||| |.||.|||| &5' ------------GGGCTTTCGGGGA 3' |
TRIM15 | hsa-miR-125b | beg:281 | end:297 | pic:3' AGTGTTCAATCCC-AGAGTCCCT 5'& ||| |.||.|||| &5' ----------GGGCTTTCGGGGA 3' |
TRIM15 | hsa-miR-1266 | beg:170 | end:188 | pic:3' TCGGGACAAGATGTCGGGACTCC 5'& ||||| || |.|||||| &5' --CCCTG----AC-GTCCTGAG- 3' |
TRIM15 | hsa-miR-1274a | beg:100 | end:118 | pic:3' ACCGCGGACTTGTCCCTG 5'& |||| ||||||||. &5' -GGCGAGAGAACAGGGG- 3' |
TRIM15 | hsa-miR-1290 | beg:169 | end:193 | pic:3' AGGGACT--AGG-TTTTTAGGT 5'& ||||||| ||| .|. ||| &5' TCCCTGACGTCCTGAGCCTCC- 3' |
TRIM15 | hsa-miR-1304 | beg:206 | end:225 | pic:3' GTGTAGAGTGACATCGGAGTTT 5'& .|| ||||| |||||.| &5' -----TTCTCTGTA-CCTCAGA 3' |
TRIM15 | hsa-miR-1306 | beg:267 | end:285 | pic:3' GTGGTGGTCTCGGTTGCA 5'& ||| .||||||.|| &5' -ACCTA-GGAGCCAGCG- 3' |
TRIM15 | hsa-miR-1321 | beg:175 | end:196 | pic:3' TAGTGTAAG---TGGAGGGAC 5'& ||.| .|||||||| &5' ---ACGTCCTGAGCCTCCCTG 3' |
TRIM15 | hsa-miR-142-5p | beg:134 | end:154 | pic:3' TCATCACGAAAGATGAAATAC 5'& | || |||.|||||||| &5' -GCGGTTGTTTTTACTTTAT- 3' |
TRIM15 | hsa-miR-182star | beg:220 | end:236 | pic:3' ATCAACCGTTCAGATCTTGGT 5'& .||| ||||||| &5' --------GAGTGCAGAACCA 3' |
TRIM15 | hsa-miR-193bstar | beg:151 | end:178 | pic:3' AGTAGAG--CGGGAGTTTTGGGGC 5'& |.||||. |||||||. |||.| &5' TTATCTTAGGCCCTCAGCTCCCTG 3' |
TRIM15 | hsa-miR-202 | beg:204 | end:222 | pic:3' AAGGGTACGGGATATGGAGA 5'& ||. |.||.|||||| &5' --CCTT--CTCTGTACCTC- 3' |
TRIM15 | hsa-miR-2052 | beg:330 | end:346 | pic:3' TGTAATGACAATAGTTTTGT 5'& |||||| ||||||.| &5' -----ACTGTT-TCAAAATA 3' |
TRIM15 | hsa-miR-20astar | beg:216 | end:231 | pic:3' GAAATTCACGAGTATTACGTCA 5'& |||| |.||||| &5' ---------CTCAGAGTGCAG- 3' |
TRIM15 | hsa-miR-218-1star | beg:218 | end:236 | pic:3' GGTACCACGAACTGCCTTGGTA 5'& || |||| |||||| &5' -CAGAGTGCA-----GAACCA- 3' |
TRIM15 | hsa-miR-220c | beg:177 | end:198 | pic:3' TCAGAAGTGTTGTCGGGACACA 5'& ||| |.| ||||||| &5' -GTCCTG--AGCCTCCCTGTG- 3' |
TRIM15 | hsa-miR-222 | beg:267 | end:289 | pic:3' TGGGTCATCGGTCTACATCGA 5'& |||.|| |||||| .||| &5' ACCTAGGAGCCAGCG--GGCT 3' |
TRIM15 | hsa-miR-26bstar | beg:96 | end:116 | pic:3' CTCGGTTCATTACCTCTTGTCC 5'& |. |.| | ||||||||| &5' --GTGAGGCGA--GAGAACAGG 3' |
TRIM15 | hsa-miR-27b | beg:177 | end:199 | pic:3' CGTCTTGAATCGGT--GACACTT 5'& | || |||| |||||| &5' ---GTCCTGAGCCTCCCTGTGA- 3' |
TRIM15 | hsa-miR-29b-2star | beg:180 | end:203 | pic:3' GATTCGGTGGTACACTTTGGTC 5'& ||.|||| || ||||| .|. &5' CTGAGCCTCCCTGTGACGCT-- 3' |
TRIM15 | hsa-miR-3121 | beg:135 | end:157 | pic:3' ACAGGAAACGGATGAGATAAAT 5'& ||. ||| .||||.|||||| &5' -GTTGTTT--TTACTTTATTTA 3' |
TRIM15 | hsa-miR-3127 | beg:163 | end:187 | pic:3' GAAGGGTA-AGGTGTT-CGGGACTA 5'& |.|| ||| ..| |.||||| &5' ---CTCAGCTCCCTGACGTCCTGA- 3' |
TRIM15 | hsa-miR-3160 | beg:154 | end:174 | pic:3' ACCCGAAAG-ATCA--GAGTCGAGA 5'& || ||| |||||||| &5' -------TCTTAGGCCCTCAGCTC- 3' |
TRIM15 | hsa-miR-3162 | beg:168 | end:196 | pic:3' GAGGG---GTGGGAAGATGAGGGATT 5'& ||||| | ||| ||||||. &5' CTCCCTGACGTCCTGAGCCTCCCTG- 3' |
TRIM15 | hsa-miR-3162 | beg:71 | end:92 | pic:3' GAGGGGTGGGAAGATGAGGGATT 5'& | .||| .||||||. &5' ----CGGCCCGGGGGCTCCCTG- 3' |
TRIM15 | hsa-miR-3180-3p | beg:38 | end:63 | pic:3' CCGGAGGCCT----TCGAGGCGGGGT 5'& .||||||. ||||||||||| &5' --TCTCCGGGATCCAGCTCCGCCCC- 3' |
TRIM15 | hsa-miR-3181 | beg:71 | end:88 | pic:3' GGCCGCGGCTCCCGGGCTA 5'& |||| |||.||||.| &5' -CGGC-CCGGGGGCTC--- 3' |
TRIM15 | hsa-miR-3190-5p | beg:198 | end:223 | pic:3' AGAGACCGGCAGATGGAA-GGTGT 5'& |||||||| ||| |. || || &5' -CTCTGGCCTTCT-CTGTACCTCA 3' |
TRIM15 | hsa-miR-324-3p | beg:276 | end:296 | pic:3' GGTCGTCGTGGA--CCCCGTCA 5'& |||||.| .|.| |||| &5' CCAGCGG-GCTTTCGGGG---- 3' |
TRIM15 | hsa-miR-326 | beg:60 | end:82 | pic:3' GACC--TCCTTC-CCGGGTCTCC 5'& |||| || | |||||.|.| &5' CTGGCCAGTGTGCGGCCCGGGG- 3' |
TRIM15 | hsa-miR-330-5p | beg:62 | end:82 | pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& ||| |. . | |||||.|.| &5' GCC-AGTGTGC-GGCCCGGGG- 3' |
TRIM15 | hsa-miR-331-3p | beg:65 | end:86 | pic:3' AAGATCCTAT-CCGGGTCCCCG 5'& || |. |||||.||||| &5' ----AGTGTGCGGCCCGGGGGC 3' |
TRIM15 | hsa-miR-4253 | beg:83 | end:97 | pic:3' TGGGGGACCTGTACGGGA 5'& .|.||||| ||||| &5' GCTCCCTG----TGCCC- 3' |
TRIM15 | hsa-miR-425star | beg:159 | end:187 | pic:3' CCCGCCTGT------GCTGTAAGGGCTA 5'& ||| || .|||. |||.|| &5' -GGCCCTCAGCTCCCTGACG-TCCTGA- 3' |
TRIM15 | hsa-miR-4261 | beg:79 | end:97 | pic:3' ACCC-AGGGACAAAGGA 5'& ||| ||||||| || &5' -GGGCTCCCTGTGCCC- 3' |
TRIM15 | hsa-miR-4270 | beg:68 | end:92 | pic:3' CGGGAGGGGA--CTGAGGGACT 5'& |. | ||| |.||||||| &5' GTGCGGCCCGGGGGCTCCCTG- 3' |
TRIM15 | hsa-miR-4273 | beg:210 | end:230 | pic:3' GACA-GGTAGTCTCTTGTG 5'& |||| || |||||| .|| &5' CTGTACC-TCAGAGTGCA- 3' |
TRIM15 | hsa-miR-4281 | beg:179 | end:202 | pic:3' GGGG---GGAGGGGCCCTGGG 5'& ||. ||||||.| ||| | &5' -CCTGAGCCTCCCTGTGACGC 3' |
TRIM15 | hsa-miR-4283 | beg:174 | end:192 | pic:3' TTTG-AGCGACTCGGGGT 5'& .|| || |||||||.| &5' -GACGTC-CTGAGCCTC- 3' |
TRIM15 | hsa-miR-4294 | beg:74 | end:90 | pic:3' GGGACGACATCTGAGGG 5'& ||| .|.||||| &5' CCCGG----GGGCTCCC 3' |
TRIM15 | hsa-miR-4296 | beg:174 | end:193 | pic:3' ACT-C-GGACTCGGGTGTA 5'& || | |||||||| | &5' -GACGTCCTGAGCCTCC-- 3' |
TRIM15 | hsa-miR-4300 | beg:72 | end:90 | pic:3' CTTCATCAGG---TCGAGGGT 5'& | | || .|||||| &5' ---GCGGCCCGGGGGCTCCC- 3' |
TRIM15 | hsa-miR-4302 | beg:178 | end:196 | pic:3' GAGCGACTCGGTGTGACC 5'& || ||||||| | ||| &5' -TC-CTGAGCCTCCCTG- 3' |
TRIM15 | hsa-miR-4307 | beg:291 | end:315 | pic:3' CCTTTG---TCCTTTTTTGTAA 5'& ||||| || ||||.|||| &5' GGAAAAAAAAGAAAAAGACAT- 3' |
TRIM15 | hsa-miR-4309 | beg:42 | end:58 | pic:3' ACCTTAGGATCTGAGGTC 5'& ||.|||| || |||| &5' -GGGATCC-AG-CTCC-- 3' |
TRIM15 | hsa-miR-4319 | beg:282 | end:297 | pic:3' CACCGAAACGAGTCCCT 5'& ||||| ||.|||| &5' --GGCTT---TCGGGGA 3' |
TRIM15 | hsa-miR-4320 | beg:34 | end:52 | pic:3' TCCTTCGAT--GTCTTAGGG 5'& .||| |.|.|||| &5' ----GGCTCTCCGGGATCC- 3' |
TRIM15 | hsa-miR-4322 | beg:171 | end:193 | pic:3' GGGGTGCGCGACTCGGGTGTC 5'& ||. |||. ||||||| | &5' CCTGACGTCCTGAGCCTCC-- 3' |
TRIM15 | hsa-miR-507 | beg:213 | end:233 | pic:3' AAGTGAGGTTTTCCACGTTTT 5'& .|| ||.| |||||.|| &5' --TACCTCAGA--GTGCAGAA 3' |
TRIM15 | hsa-miR-511 | beg:292 | end:315 | pic:3' ACTGACGTCTCGTTTTCTGTG 5'& || || ||||||||. &5' -GAAAAAAAAGAAAAAGACAT 3' |
TRIM15 | hsa-miR-513a-5p | beg:173 | end:199 | pic:3' TACTG-------TGGAGGGACACTT 5'& |||| .||||||||||| &5' -TGACGTCCTGAGCCTCCCTGTGA- 3' |
TRIM15 | hsa-miR-544 | beg:216 | end:233 | pic:3' CTTGAACGATTTTTACGTCTTA 5'& || |.|.||||||| &5' -------CTCAGAGTGCAGAA- 3' |
TRIM15 | hsa-miR-548j | beg:134 | end:152 | pic:3' TGGTTTCTGGCGTTAATGAAAA 5'& | .|. ||||||| &5' ------GGTTGTTTTTACTTT- 3' |
TRIM15 | hsa-miR-559 | beg:134 | end:153 | pic:3' AAAACC-ACGTATAAATGAAAT 5'& || ||. ||||||||| &5' ----GGTTGTT--TTTACTTTA 3' |
TRIM15 | hsa-miR-564 | beg:75 | end:96 | pic:3' CGGACGACTGT--GGCACGGA 5'& ||| | |.| |.||||| &5' GCCCGGGGGCTCCCTGTGCC- 3' |
TRIM15 | hsa-miR-564 | beg:239 | end:257 | pic:3' CGGACGACTGTGGCACGGA 5'& ||| .|.|||||| &5' ----GCTTCGGCTGTGCCT 3' |
TRIM15 | hsa-miR-571 | beg:35 | end:57 | pic:3' GAGTGAGTCTACC--GGTTGAGT 5'& .||| || |||.||| &5' ---GCTCTCCGGGATCCAGCTC- 3' |
TRIM15 | hsa-miR-615-5p | beg:68 | end:90 | pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& .| || || ||||||.|.||| &5' -GTGCG-GC-CCGGGGGCTCCC 3' |
TRIM15 | hsa-miR-626 | beg:233 | end:245 | pic:3' TTCTGTAAAAGTCTGTCGA 5'& |||||.||| &5' ----------CAGACGGCT 3' |
TRIM15 | hsa-miR-627 | beg:145 | end:170 | pic:3' AGGAG-AAA-AGAATCTCTGAGTG 5'& |.|. ||| ||||||. |||| &5' -CTTTATTTATCTTAGGCCCTCA- 3' |
TRIM15 | hsa-miR-647 | beg:255 | end:270 | pic:3' CTTCCTTCACTCAC-GTCGGTG 5'& |.| |||||| &5' ---------GGGCAACAGCCA- 3' |
TRIM15 | hsa-miR-649 | beg:120 | end:141 | pic:3' CTGAGAACTTGTTGTGTCCAAA 5'& || ||| |||||.| |||| &5' GAGTCTCGAACAGC---GGTT- 3' |
TRIM15 | hsa-miR-659 | beg:255 | end:283 | pic:3' ACCCC----TGGGAGGGA-CTTGGTTC 5'& ||| .|| ||. ||.|||. &5' -GGGCAACAGCCAACCTAGGAGCCAG- 3' |
TRIM15 | hsa-miR-892b | beg:52 | end:72 | pic:3' AGATGGGTCTTTCCTCGGTCAC 5'& || ||| .||||||| &5' TCCGCCCCT-----GGCCAGTG 3' |
TRIM15 | hsa-miR-920 | beg:69 | end:91 | pic:3' ATGACGAAGG--TGTCGAGGGG 5'& ||| || . .||||||. &5' ---TGCGGCCCGGGGGCTCCCT 3' |
TRIM15 | hsa-miR-939 | beg:74 | end:91 | pic:3' GTGGGGGTCTCGGAGTCGAGGGGT 5'& |||.|.| ||||||. &5' ----CCCGGGG-----GCTCCCT- 3' |
TRIM15 | hsa-miR-939 | beg:154 | end:177 | pic:3' GTGGGGGTCTCGGAGTCGAGGGGT 5'& .|..|| |||||||||||. &5' ---TCTTAGGCCCTCAGCTCCCT- 3' |
TRIM15 | hsv1-miR-H14-5p | beg:58 | end:78 | pic:3' GGACTCGGTCCCTGCTCACGCTGA 5'& |||| ||||| |||||.| &5' CCTG-GCCAGT-----GTGCGGC- 3' |
TRIM15 | hsv1-miR-H5-5p | beg:174 | end:195 | pic:3' CATCTCTAC-GGGCTTGGGGGGG 5'& || | ||.||.||.|||. &5' -----GACGTCCTGAGCCTCCCT 3' |
TRIM15 | hsv2-miR-H5 | beg:177 | end:195 | pic:3' CCAGTCCACCGGGCTCGGGGGGG 5'& | ||.|||||.|||. &5' --------GTCCTGAGCCTCCCT 3' |
TRIM15 | kshv-miR-K12-8 | beg:239 | end:259 | pic:3' ACGAGAGAGTCAGCGCGGATC 5'& ||| ||.| .|.|||||| &5' -GCT---TCGGCTGTGCCTAG 3' |