SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs1374529 | snp | C/G | 0 | 0 | intron-variant | INTS12 | GRCh38.p7 | 4:105697412 | TCTCTTCCCCCCTCA[C/G]AGGTAACCACTATTC | 57117 |
rs3213950 | snp | C/T | 0.00546505 | 0.0519871 | utr-variant-5-prime, nc-transcript-variant | INTS12 | GRCh38.p7 | 4:105700012 | AGCAGCCATTGCAAA[C/T]GCCTGAAGGAAAAAA | 57117 |
rs3756260 | snp | C/G | 0.46974 | 0.119223 | upstream-variant-2KB, utr-variant-5-prime, nc-transcript-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105708873 | CGTTTTTCTCCTGGC[C/G]TCTGTGGAGGCGAGT | 57117 |
rs3796924 | snp | C/G | 0.000399281 | 0.0141238 | intron-variant | INTS12 | GRCh38.p7 | 4:105688603 | ATCTTATCCTTCATT[C/G]CAAAACCATGTTACG | 57117 |
rs3796925 | snp | A/G | 0.00796804 | 0.0626141 | intron-variant | INTS12 | GRCh38.p7 | 4:105701651 | CTTTTTTTTCTTTAA[A/G]TTCCACTCCTGTGAC | 57117 |
rs4434257 | snp | A/T | 0.100231 | 0.200173 | intron-variant | INTS12 | GRCh38.p7 | 4:105698220 | CCTTCCTCATTAATG[A/T]AAATGAATATCAACC | 57117 |
rs4490460 | snp | C/T | 0.245631 | 0.249962 | intron-variant | INTS12 | GRCh38.p7 | 4:105697912 | aaaattagccaagca[C/T]ggtggcatgcacctg | 57117 |
rs4699196 | snp | C/T | 0.463666 | 0.129795 | upstream-variant-2KB, intron-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105709792 | TGTATTTCTATTTTA[C/T]CTAAGCTTATCTGTA | 57117 |
rs5860807 | in-del | -/T | 0.307176 | 0.243374 | intron-variant | INTS12 | GRCh38.p7 | 4:105698554 | AAAACAATTTTTTTT[-/T]CTTTAGTAATAATAG | 57117 |
rs6820671 | snp | A/G | 0.345925 | 0.230864 | intron-variant | INTS12 | GRCh38.p7 | 4:105692664 | TATATAGAATGCCTT[A/G]ATTAAATTTGGCTAT | 57117 |
rs6850604 | snp | G/T | 0.0566069 | 0.158427 | intron-variant, upstream-variant-2KB | INTS12, GSTCD | GRCh38.p7 | 4:105707223 | ACTGACAGCTGCTGT[G/T]CCCCTCTCCATTCCA | 57117 |
rs7659526 | snp | C/T | 0.347694 | 0.230122 | intron-variant | INTS12 | GRCh38.p7 | 4:105700486 | AATGGTGAAAAGGTA[C/T]ATTAAGTGATTAGCT | 57117 |
rs10008158 | snp | A/G | 0 | 0 | synonymous-codon, nc-transcript-variant | INTS12 | GRCh38.p7 | 4:105683066 | AGTGGGCGTAGTGCT[A/G]TTATTGGAACCTATT | 57117 |
rs10016392 | snp | C/T | 0.000399281 | 0.0141238 | intron-variant | INTS12 | GRCh38.p7 | 4:105701606 | AAACCTGCCATTCCC[C/T]CAGCATATACAAGGG | 57117 |
rs10516523 | snp | G/T | 0.46974 | 0.119223 | intron-variant | INTS12 | GRCh38.p7 | 4:105704106 | CTTTTATAGCAAAAC[G/T]TTCTCAGAAATCATA | 57117 |
rs10615792 | in-del | -/AT | 0.223225 | 0.248562 | intron-variant | INTS12 | GRCh38.p7 | 4:105690459 | ATAGATTTCAGAGAC[-/AT]ATAAGAGGTAGAATT | 57117 |
rs10672030 | in-del | -/T | 0 | 0 | upstream-variant-2KB, intron-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105710233 | TTTTTTTTTTTTTTT[-/T]GAGCTGGAGTCCTGC | 57117 |
rs11726569 | snp | A/G | 0.0614824 | 0.164198 | intron-variant | INTS12 | GRCh38.p7 | 4:105685451 | CTATATGACAAATCA[A/G]TAATGGATATGCCTT | 57117 |
rs11727189 | snp | G/T | 0.0614824 | 0.164198 | intron-variant | INTS12 | GRCh38.p7 | 4:105697983 | tgaacctgggaggga[G/T]agagcgcagtgagcc | 57117 |
rs11727735 | snp | A/G | 0.0486741 | 0.148216 | upstream-variant-2KB, intron-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105710713 | TGTGAAAATTCAGTA[A/G]TTTTATTTCATACTT | 57117 |
rs11728044 | snp | C/G | 0.0622301 | 0.165053 | intron-variant | INTS12 | GRCh38.p7 | 4:105683629 | TAGTGCTTTAACATA[C/G]TTTTTACCCAACAAA | 57117 |
rs11940951 | snp | A/G | 0 | 0 | intron-variant, upstream-variant-2KB | INTS12, GSTCD | GRCh38.p7 | 4:105707034 | AAATTTCTTGGCCTA[A/G]CATTTAAGAAGATTC | 57117 |
rs11941690 | snp | A/C | 0.471768 | 0.115407 | intron-variant | INTS12 | GRCh38.p7 | 4:105690103 | AGCTGAGAAGCAGAA[A/C]ATATGGGAACATGAA | 57117 |
rs12374256 | snp | A/G | 0.0629771 | 0.165899 | intron-variant | INTS12 | GRCh38.p7 | 4:105696204 | ttgacatatgtatac[A/G]tctgtgacaccatca | 57117 |
rs12507921 | snp | A/G | 0 | 0 | intron-variant | INTS12 | GRCh38.p7 | 4:105695025 | tgcctcctgggctca[A/G]gcaatcctcccaccc | 57117 |
rs13111824 | snp | G/T | | | upstream-variant-2KB, intron-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105710493 | ctcggcttcccaaag[G/T]ggtgggattacaggc | 57117 |
rs13132641 | snp | A/T | 0.0131051 | 0.0798799 | intron-variant | INTS12 | GRCh38.p7 | 4:105684775 | GTTATGAAAGACCTA[A/T]TTTTTTTTCCTTTTC | 57117 |
rs13142949 | snp | C/T | | | intron-variant | INTS12 | GRCh38.p7 | 4:105702131 | atttatttctatttc[C/T]ttttttttttttttt | 57117 |
rs17036109 | snp | A/G | 0.00953873 | 0.0683987 | intron-variant | INTS12 | GRCh38.p7 | 4:105684085 | ACAGTGACATTTTGG[A/G]TAGGACTGATCTCAT | 57117 |
rs17036120 | snp | C/G | 0.0614824 | 0.164198 | intron-variant | INTS12 | GRCh38.p7 | 4:105700351 | CAGTACATAGAACTT[C/G]ATGGGTTTACGTCAA | 57117 |
rs17036123 | snp | C/T | 0.0622301 | 0.165053 | intron-variant | INTS12 | GRCh38.p7 | 4:105701033 | TGCAGCACACTTGCA[C/T]TGCTATAGTTAGGGA | 57117 |
rs17036125 | snp | A/T | 0.0614824 | 0.164198 | intron-variant | INTS12 | GRCh38.p7 | 4:105702517 | TATAATTGATCTTTA[A/T]CCTCAAGGAGCTTTA | 57117 |
rs17036129 | snp | C/T | 0.0486741 | 0.148216 | intron-variant | INTS12 | GRCh38.p7 | 4:105703372 | AATTCTTAGGTGATG[C/T]TGGGAATTAGCTGTG | 57117 |
rs17036133 | snp | A/C | 0.0248432 | 0.108648 | intron-variant | INTS12 | GRCh38.p7 | 4:105703576 | TCCCTACTTTATAGA[A/C]ATCCACCCTGCTAGC | 57117 |
rs17262443 | snp | C/T | 0.110167 | 0.207236 | intron-variant | INTS12 | GRCh38.p7 | 4:105693649 | AGATCTGTAGAAGAA[C/T]TGCAATGAATTTATT | 57117 |
rs17262457 | snp | C/T | 0.109461 | 0.206758 | intron-variant | INTS12 | GRCh38.p7 | 4:105697205 | ATAGCTTTGCTGATA[C/T]AGATAACTTGTTATT | 57117 |
rs17262764 | snp | A/G | 0.46974 | 0.119223 | intron-variant, upstream-variant-2KB | INTS12, GSTCD | GRCh38.p7 | 4:105707852 | TCTGTGATCTCTCCA[A/G]TCTAAATTGGGCATT | 57117 |
rs28391170 | snp | A/C | 0.342134 | 0.232404 | intron-variant, upstream-variant-2KB, utr-variant-5-prime | INTS12, GSTCD | GRCh38.p7 | 4:105708089 | CTTCCAATAAACATT[A/C]TTTTAAAGATGCTGC | 57117 |
rs28403197 | snp | A/G | 0.171704 | 0.237423 | intron-variant, upstream-variant-2KB, utr-variant-5-prime | INTS12, GSTCD | GRCh38.p7 | 4:105708410 | TGTCCCTAGACCTAG[A/G]AATATGCTCGGTCCG | 57117 |
rs28414565 | snp | A/C | 0.172351 | 0.237636 | intron-variant | INTS12 | GRCh38.p7 | 4:105683672 | TTAGTTAAACATCTA[A/C]TTCTTTTAGACTTTT | 57117 |
rs28450989 | snp | C/G | 0.328148 | 0.237472 | upstream-variant-2KB, utr-variant-5-prime, nc-transcript-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105708850 | TATTTTCCACATAAG[C/G]TGGCTGTCGTTTTTC | 57117 |
rs28628106 | snp | C/T | 0.46974 | 0.119223 | intron-variant | INTS12 | GRCh38.p7 | 4:105686084 | TTTCTTTTTTTGAGT[C/T]GCAGTTTCGCTCTTG | 57117 |
rs28642176 | snp | A/C | 0.171704 | 0.237423 | intron-variant | INTS12 | GRCh38.p7 | 4:105705027 | ATCACTTCTCACAAT[A/C]CAAAGGTTCAAGAAT | 57117 |
rs34072732 | snp | A/G | 0.0978298 | 0.198354 | synonymous-codon, nc-transcript-variant | INTS12 | GRCh38.p7 | 4:105683207 | CAATTTTGCTGTTGA[A/G]GGACCAGCAGAGGAA | 57117 |
rs34166034 | in-del | -/C | | | intron-variant, utr-variant-5-prime | INTS12 | GRCh38.p7 | 4:105702893 | TATCTTACCTTTACT[-/C]CCCCTTTTCTGTTGC | 57117 |
rs34234581 | snp | C/T | 0.00192581 | 0.0309709 | synonymous-codon, nc-transcript-variant, downstream-variant-500B | INTS12, ARHGEF38 | GRCh38.p7 | 4:105682778 | CTTCTTGACCATCTG[C/T]AATCGCTTCATAGCA | 57117 |
rs34535300 | in-del | -/C | | | intron-variant | INTS12 | GRCh38.p7 | 4:105686102 | GTTTCGCTCTTGTCA[-/C]CCCAGGCTGGAGTGC | 57117 |
rs34567094 | snp | C/T | 0.0499671 | 0.149956 | missense, nc-transcript-variant | INTS12 | GRCh38.p7 | 4:105683155 | GGTTAGCTGACGAAG[C/T]AGCAGGTTTCCCAGT | 57117 |
rs34938249 | in-del | -/G | | | intron-variant | INTS12 | GRCh38.p7 | 4:105685801 | AGGCCAAGATATTAA[-/G]GAAATAATGTAGTAT | 57117 |
rs34969827 | in-del | -/G | | | frameshift-variant, nc-transcript-variant, downstream-variant-500B | INTS12, ARHGEF38 | GRCh38.p7 | 4:105682952 | GGAACTAAACTACTT[-/G]GGACTAGGAAGACCT | 57117 |
rs34994709 | in-del | -/T | | | intron-variant, upstream-variant-2KB | INTS12, GSTCD | GRCh38.p7 | 4:105707316 | TTCTCCCTTGAAGCA[-/T]TTTTTTTTTTTTTTT | 57117 |
rs35236206 | in-del | -/C | | | intron-variant | INTS12 | GRCh38.p7 | 4:105697699 | AAAGTCTGTTGATCA[-/C]CTGGTGTAGACTTAG | 57117 |
rs35370743 | snp | A/G | 0.0904758 | 0.192489 | synonymous-codon, nc-transcript-variant, downstream-variant-500B | INTS12, ARHGEF38 | GRCh38.p7 | 4:105683033 | CAAGGTTAGAGGTGG[A/G]GGTGGTTTTAAAGGT | 57117 |
rs35485586 | in-del | -/T | | | intron-variant | INTS12 | GRCh38.p7 | 4:105698885 | TGTTCTATTTTCTCC[-/T]TTCTCAGTTTGGGAT | 57117 |
rs35650037 | snp | G/T | | | upstream-variant-2KB, intron-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105710496 | GGCTTCCCAAAGGGG[G/T]GGGATTACAGGCGTG | 57117 |
rs35695511 | snp | A/C/G | 0.00382332 | 0.0435557 | synonymous-codon, nc-transcript-variant | INTS12 | GRCh38.p7 | 4:105692054 | CTTGTCTGTCACCTG[A/C/G]GGTTTATGACAATCT | 57117 |
rs35859278 | in-del | -/T | | | intron-variant | INTS12 | GRCh38.p7 | 4:105698892 | TTTTCTCCTTCTCAG[-/T]TTTGGGATCTAAGTC | 57117 |
rs36020924 | in-del | -/T | | | intron-variant | INTS12 | GRCh38.p7 | 4:105698840 | GATCCTCTCTTGAGC[-/T]TTCAGATTCTGGTTA | 57117 |
rs36071022 | in-del | -/C | | | intron-variant | INTS12 | GRCh38.p7 | 4:105684783 | GACCTAATTTTTTTT[-/C]CCTTTTCTTGCTATT | 57117 |
rs56843185 | snp | A/G | 0.108755 | 0.206276 | upstream-variant-2KB, intron-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105710152 | ATTTCTTTTTATTTT[A/G]TATACTTTGCACTTC | 57117 |
rs57389075 | in-del | -/TT | | | intron-variant | INTS12 | GRCh38.p7 | 4:105701250 | TTTTTTTTTTTTTTT[-/TT]AAGTTCCCAGGAAGG | 57117 |
rs57790298 | in-del | -/TT | | | intron-variant, upstream-variant-2KB | INTS12, GSTCD | GRCh38.p7 | 4:105707331 | TTTTTTTTTTTTTTT[-/TT]GGCACAAGTGTTATG | 57117 |
rs57956021 | snp | A/G | | | intron-variant | INTS12 | GRCh38.p7 | 4:105689362 | CCAATGCACATATGA[A/G]AATCTCACTCAAAGC | 57117 |
rs59677702 | snp | G/T | 0.000798403 | 0.0199641 | intron-variant | INTS12 | GRCh38.p7 | 4:105685694 | TTCTTCCATATTTAG[G/T]GCTATGCTTAATATT | 57117 |
rs61732560 | snp | A/G | 0.00072678 | 0.0190489 | synonymous-codon, nc-transcript-variant | INTS12 | GRCh38.p7 | 4:105693313 | CCTACAAACAACGCA[A/G]GCCAATCCCATCTCC | 57117 |
rs62320293 | snp | C/T | 0.5 | 0 | utr-variant-3-prime, nc-transcript-variant, downstream-variant-500B | INTS12, ARHGEF38 | GRCh38.p7 | 4:105682729 | AAAAACCTACTTGGC[C/T]ACATTACTTCTTGAG | 57117 |
rs62320294 | snp | C/G/T | 1.6476e-05 | 0.00287014 | missense, nc-transcript-variant | INTS12 | GRCh38.p7 | 4:105683158 | TAGCTGACGAAGTAG[C/G/T]AGGTTTCCCAGTATT | 57117 |
rs62320295 | snp | A/G/T | 6.87924e-05 | 0.00586442 | missense, synonymous-codon, nc-transcript-variant | INTS12 | GRCh38.p7 | 4:105683279 | TACTGACGAGGAAAC[A/G/T]CTGGCACTAGAAGAA | 57117 |
rs62320296 | snp | C/T | 0.0372196 | 0.131242 | intron-variant | INTS12 | GRCh38.p7 | 4:105696093 | CGGCCTCAAATGATC[C/T]GCCCACCTCGGCCTC | 57117 |
rs62320297 | snp | C/T | 0.202035 | 0.245356 | intron-variant, upstream-variant-2KB | INTS12, GSTCD | GRCh38.p7 | 4:105706791 | TCCTGTGGATTCTGA[C/T]GGCAATATTTTTCAC | 57117 |
rs70941208 | in-del | -/A | 0 | 0 | intron-variant, upstream-variant-2KB | INTS12, GSTCD | GRCh38.p7 | 4:105706971 | AAATAAAAAAAAAAA[-/A]TTCTTGCTGAGAAGT | 57117 |
rs70941210 | in-del | -/T | 0.375 | 0.216506 | upstream-variant-2KB, intron-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105710399 | TTTTTTTTTTTTTTT[-/T]CAGTCGAGGAGGGGT | 57117 |
rs71586112 | in-del | -/A | 0.5 | 0 | intron-variant, upstream-variant-2KB | INTS12, GSTCD | GRCh38.p7 | 4:105706960 | CTTTTTCATTAAAAT[-/A]AAAAAAAAAAATTCT | 57117 |
rs72671808 | snp | A/C | 0.0618563 | 0.164627 | intron-variant | INTS12 | GRCh38.p7 | 4:105684563 | ATAGAGTTCTGAGAT[A/C]TTCGATTTATAAGAG | 57117 |
rs72671809 | snp | A/C | 0.0622301 | 0.165053 | intron-variant | INTS12 | GRCh38.p7 | 4:105690380 | GAGGCAAGGAGATTT[A/C]TTAAGTGGCTATTGC | 57117 |
rs72671810 | snp | C/T | 0.0486741 | 0.148216 | intron-variant | INTS12 | GRCh38.p7 | 4:105692596 | AACAAACCCCAACAC[C/T]TGGCATGCACAAAAG | 57117 |
rs72671811 | snp | C/T | 0.0614824 | 0.164198 | intron-variant | INTS12 | GRCh38.p7 | 4:105694446 | TTCTCACGTCTCAGC[C/T]TCCTGAGGTGCTGGA | 57117 |
rs72671812 | snp | A/G | 0.0189856 | 0.0955633 | intron-variant | INTS12 | GRCh38.p7 | 4:105696133 | TGGGATTAAAGACGT[A/G]TACCACCACACCTGG | 57117 |
rs72671813 | snp | A/G | | | intron-variant | INTS12 | GRCh38.p7 | 4:105696608 | TTTATCAATTTACCT[A/G]TTGATGGATATTTGG | 57117 |
rs72671815 | snp | A/G | 0.0622301 | 0.165053 | intron-variant | INTS12 | GRCh38.p7 | 4:105697062 | GTTTGTTTTATTACT[A/G]AGTTAAAAGAGTTCT | 57117 |
rs72671820 | snp | C/T | 0.0934081 | 0.194882 | intron-variant | INTS12 | GRCh38.p7 | 4:105699826 | TTACAAAACTCTCTC[C/T]AAGCTTTTTATTCAT | 57117 |
rs72671824 | snp | A/G | 0.0622301 | 0.165053 | intron-variant | INTS12 | GRCh38.p7 | 4:105702066 | TAACATGGCCCTTTG[A/G]CCCAGTGGTCCCCAT | 57117 |
rs72671826 | snp | C/T | 0.0486741 | 0.148216 | intron-variant | INTS12 | GRCh38.p7 | 4:105703345 | GTGGTAGTAGTAGTA[C/T]TGATAGGAGTGAATT | 57117 |
rs72671828 | snp | C/T | 0.0618563 | 0.164627 | intron-variant | INTS12 | GRCh38.p7 | 4:105703643 | ACTGGGAGGAATATA[C/T]ATACATTCTATCTTC | 57117 |
rs72671835 | snp | C/T | 0.0614824 | 0.164198 | upstream-variant-2KB, intron-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105710199 | AATTTAAACACAGCT[C/T]AAACTTGAGCTTCTG | 57117 |
rs72969245 | snp | A/G | 0.0134861 | 0.0810011 | intron-variant | INTS12 | GRCh38.p7 | 4:105683892 | AAATTTTGAGCAACA[A/G]TTACAGGAGTACAAA | 57117 |
rs72969249 | snp | A/G | 0.0640965 | 0.167152 | intron-variant | INTS12 | GRCh38.p7 | 4:105691839 | TAATCACATGTACAT[A/G]CTATACATATAAATA | 57117 |
rs72969253 | snp | A/T | 0.0566069 | 0.158427 | intron-variant | INTS12 | GRCh38.p7 | 4:105704917 | CTAGCATCATCTATT[A/T]TCTGGCCCACTGCAA | 57117 |
rs72969258 | snp | C/T | 0.0134861 | 0.0810011 | upstream-variant-2KB, intron-variant | GSTCD, INTS12 | GRCh38.p7 | 4:105710531 | ACCGCGCCCGGCCTG[C/T]TTTTGTTTTTTTAAA | 57117 |
rs73837096 | snp | A/C | 0.109461 | 0.206758 | intron-variant | INTS12 | GRCh38.p7 | 4:105685412 | AACTGGTTATTCTTA[A/C]TTCTATTCCAATTCA | 57117 |
rs73837101 | snp | C/T | 0.0138799 | 0.0821421 | intron-variant | INTS12 | GRCh38.p7 | 4:105700361 | AACTTGATGGGTTTA[C/T]GTCAAGTTTACTCTG | 57117 |
rs73837102 | snp | C/T | 0.5 | 0 | intron-variant | INTS12 | GRCh38.p7 | 4:105700820 | TACATCAAAGGCTTA[C/T]GAAATTCCACAATAC | 57117 |
rs73839003 | snp | A/C | 0.0494327 | 0.149241 | intron-variant | INTS12 | GRCh38.p7 | 4:105701473 | ATTATTATATACATC[A/C]CCTCTACATAATGAT | 57117 |
rs73839004 | snp | A/G | 0.109814 | 0.206997 | intron-variant | INTS12 | GRCh38.p7 | 4:105704479 | AACTCTGGGAGTAGG[A/G]TCTAGAAATCTGTGT | 57117 |
rs73839006 | snp | C/T | 0.108755 | 0.206276 | intron-variant | INTS12 | GRCh38.p7 | 4:105706681 | TCCTGCTCTTACTTT[C/T]AATAAATGACACAAC | 57117 |
rs74317794 | snp | A/C | | | intron-variant | INTS12 | GRCh38.p7 | 4:105683981 | TCATGATTTTAGTTT[A/C]ACAATTTGCCCATGA | 57117 |
rs74464047 | snp | C/T | 0.108755 | 0.206276 | intron-variant | INTS12 | GRCh38.p7 | 4:105698156 | AGCAAAAAAGTTGTT[C/T]TAGTTGTTGACGGAT | 57117 |
rs74497593 | snp | C/T | 0.0622301 | 0.165053 | intron-variant | INTS12 | GRCh38.p7 | 4:105695057 | CCACCCGCCCACAAA[C/T]AGCTGGGACTACAGG | 57117 |
rs74516377 | snp | C/G/T | | | intron-variant | INTS12 | GRCh38.p7 | 4:105691493 | GAGGACAATGAGAAG[C/G/T]AAAGACTAAGCAACA | 57117 |
rs74673939 | snp | C/T | 0.0193772 | 0.0965046 | intron-variant | INTS12 | GRCh38.p7 | 4:105689499 | CTTTTGGTATTTCCC[C/T]ACATTTGCTCTTGGT | 57117 |