SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs587507 | snp | A/G | 0.0452528 | 0.143452 | intron-variant, upstream-variant-2KB, nc-transcript-variant | TLE3, MIR629, LOC105370877 | GRCh38.p7 | 15:70080397 | TGGTTCAAAGCAGGC[A/G]CTTTGTTGGTGGAAA | 7090 |
rs587524 | snp | C/T | 0.0490535 | 0.14873 | intron-variant, upstream-variant-2KB, nc-transcript-variant | TLE3, MIR629, LOC105370877 | GRCh38.p7 | 15:70080407 | CAGGCGCTTTGTTGG[C/T]GGAAAAACATTGTTC | 7090 |
rs591181 | snp | A/G | 0.040671 | 0.13668 | intron-variant | TLE3 | GRCh38.p7 | 15:70065857 | GGTGCAGGGAAGCCA[A/G]TGCCATCCGCATCCC | 7090 |
rs592138 | snp | C/T | 0.0513262 | 0.151752 | intron-variant | TLE3 | GRCh38.p7 | 15:70065633 | GTTGGGATGCCAAAG[C/T]TGAGTCCTTGTTACT | 7090 |
rs593011 | snp | A/G | 0.0444908 | 0.142359 | intron-variant | TLE3 | GRCh38.p7 | 15:70065452 | AAGGTTTGTTAGCTG[A/G]CTGCCTGTAAGTGGG | 7090 |
rs594848 | snp | A/G | 0 | 0 | intron-variant | TLE3 | GRCh38.p7 | 15:70094335 | ACAAGCTCAAATGCT[A/G]AAAGCTCAACATGTC | 7090 |
rs600344 | snp | A/G | 0 | 0 | intron-variant, nc-transcript-variant | TLE3, LOC105370877 | GRCh38.p7 | 15:70088645 | TGCTCTCTTAAACCA[A/G]ACTGTCAATGGCATG | 7090 |
rs601706 | snp | A/G | 0.0663309 | 0.169604 | intron-variant, upstream-variant-2KB | TLE3, LOC105370877 | GRCh38.p7 | 15:70088951 | GCCATGCAGGGATGC[A/G]GGGAGCCACCGGGTG | 7090 |
rs604684 | snp | A/G | 0 | 0 | upstream-variant-2KB | TLE3 | GRCh38.p7 | 15:70099828 | CAAGCGGGAGGCTCA[A/G]AAGCCTCGGCATTTG | 7090 |
rs614155 | snp | C/T | 0 | 0 | intron-variant, upstream-variant-2KB | TLE3, LOC105370877 | GRCh38.p7 | 15:70089439 | CCAACCCCCTCATTT[C/T]ACTGATGAAGAAACT | 7090 |
rs616487 | snp | A/G | 0.0494327 | 0.149241 | intron-variant, synonymous-codon | TLE3 | GRCh38.p7 | 15:70050315 | GGGCAGAGGAGGGCA[A/G]TTGTTGCCGAGAGAA | 7090 |
rs618468 | snp | A/C | 0.378962 | 0.21417 | intron-variant, nc-transcript-variant | TLE3, LOC105370877 | GRCh38.p7 | 15:70084831 | AATTGTCAAGGCCTC[A/C]GACATAGAGGACAAG | 7090 |
rs623552 | snp | C/T | 0.0107246 | 0.0724382 | intron-variant | TLE3 | GRCh38.p7 | 15:70069810 | GGGGTCAGGTGGGGC[C/T]TTGCCCACTGGCCCC | 7090 |
rs627162 | snp | A/G | | | intron-variant | TLE3 | GRCh38.p7 | 15:70053733 | AGTCATCTCACACGT[A/G]GCTTCCCCAGGGCCT | 7090 |
rs629670 | snp | G/T | 0 | 0 | intron-variant, upstream-variant-2KB | TLE3, LOC105370877 | GRCh38.p7 | 15:70089470 | GGATGCTGGGCCATA[G/T]GAGGAAGCCTGCATA | 7090 |
rs630603 | snp | C/T | 0.124491 | 0.216211 | intron-variant | TLE3 | GRCh38.p7 | 15:70067314 | CATCTTTCTTCTCAA[C/T]TAGTGCAAGAGAAGA | 7090 |
rs631864 | snp | A/G | 0.495671 | 0.0463237 | intron-variant, nc-transcript-variant | TLE3, LOC105370877 | GRCh38.p7 | 15:70084102 | TCTGTAAAATGAGAG[A/G]TCAAATGGTGTGGCT | 7090 |
rs642306 | snp | C/T | 0.0376037 | 0.131863 | intron-variant | TLE3 | GRCh38.p7 | 15:70077194 | AACAGTTTCCACCAG[C/T]ATCCTATGTAAACTT | 7090 |
rs643903 | snp | C/G | 0.125182 | 0.216612 | intron-variant | TLE3 | GRCh38.p7 | 15:70068021 | TCTTAGCTGGGAGGG[C/G]TTGGATCTCCGCATT | 7090 |
rs658219 | snp | A/C | 0.0414109 | 0.137806 | intron-variant | TLE3 | GRCh38.p7 | 15:70074611 | CACACCCTCTTCCCT[A/C]CAGCACCAGCAGCAG | 7090 |
rs658279 | snp | C/T | 0.0663309 | 0.169604 | intron-variant | TLE3 | GRCh38.p7 | 15:70091278 | GTCCACTTTCAAAAA[C/T]GTCAGTGCTCACCAA | 7090 |
rs658939 | snp | C/T | 0.02016 | 0.0983543 | utr-variant-3-prime | TLE3 | GRCh38.p7 | 15:70049134 | AAGTTCAAAGGAACT[C/T]CCTCTCCAGCTCTTC | 7090 |
rs661046 | snp | G/T | 0.296619 | 0.245615 | intron-variant, nc-transcript-variant | TLE3, LOC105370877 | GRCh38.p7 | 15:70086908 | AACTGTCCATAGTGT[G/T]AGATGAAAAGAAAAA | 7090 |
rs661936 | snp | C/T | 0.00199481 | 0.0315187 | intron-variant | TLE3 | GRCh38.p7 | 15:70054964 | GAGAGCCCCAGGGCC[C/T]GGCTCAGCATCGTAT | 7090 |
rs663517 | snp | A/G | 0.113685 | 0.209567 | utr-variant-3-prime | TLE3 | GRCh38.p7 | 15:70048786 | TGGCACACTGTGGAT[A/G]TTTCTTGCAGATTGC | 7090 |
rs671748 | snp | C/T | 0.131723 | 0.220251 | intron-variant, downstream-variant-500B | TLE3, MIR629, LOC105370877 | GRCh38.p7 | 15:70079163 | CACCCCTCCACCCTC[C/T]TAAAGTAGTTCCTGC | 7090 |
rs675683 | snp | C/T | 0.125528 | 0.21681 | intron-variant | TLE3 | GRCh38.p7 | 15:70072002 | CAGCCGAGTCGTGCT[C/T]GCACTGGGGAGCCGT | 7090 |
rs685656 | snp | G/T | 0.125182 | 0.216612 | intron-variant | TLE3 | GRCh38.p7 | 15:70066546 | TCAGAGGGAACCCCA[G/T]GACTCTGCGGTTTTT | 7090 |
rs975210 | snp | C/T | 0.260227 | 0.249791 | intron-variant | TLE3 | GRCh38.p7 | 15:70072013 | GGAATTACGGACAGC[C/T]GAGTCGTGCTCGCAC | 7090 |
rs1057515 | snp | C/T | 0 | 0 | utr-variant-3-prime | TLE3 | GRCh38.p7 | 15:70049187 | CTCAGCCTGGTCTTT[C/T]TCTTTGGTGCACACT | 7090 |
rs1057516 | snp | C/T | 0 | 0 | utr-variant-3-prime | TLE3 | GRCh38.p7 | 15:70049185 | CAGCCTGGTCTTTCT[C/T]TTTGGTGCACACTTA | 7090 |
rs1057864 | snp | C/T | 3.31356e-05 | 0.00407022 | missense | TLE3 | GRCh38.p7 | 15:70060558 | CCAAGAAGCGGAAGG[C/T]GGAGGAGAAGGACAG | 7090 |
rs1057865 | snp | A/G | 0.492793 | 0.0595955 | synonymous-codon, utr-variant-3-prime | TLE3 | GRCh38.p7 | 15:70053287 | GGGCCTGGACAACAC[A/G]GTGCGCTCCTGGGAC | 7090 |
rs1057866 | snp | C/G | 0 | 0 | missense | TLE3 | GRCh38.p7 | 15:70052434 | CACCACACCAAGCCT[C/G]ACAAGTACCAGCTGC | 7090 |
rs1064360 | snp | G/T | 0 | 0 | synonymous-codon | TLE3 | GRCh38.p7 | 15:70058202 | CAGCACGACCCCAGG[G/T]CTCAGGTCGATGCCG | 7090 |
rs1566537 | snp | A/C | 0.182614 | 0.240747 | intron-variant | TLE3 | GRCh38.p7 | 15:70066516 | TTAAATGCATGCATT[A/C]TTTATCTCAGGCTTG | 7090 |
rs1566538 | snp | A/C | 0.48955 | 0.071525 | intron-variant | TLE3 | GRCh38.p7 | 15:70063533 | AGCAGCTTCCTTGCG[A/C]AGCTCTCTCCAATCC | 7090 |
rs1566539 | snp | A/G | 0.436976 | 0.165952 | intron-variant | TLE3 | GRCh38.p7 | 15:70063424 | GTGGCCTCTTGACCC[A/G]CCTACATGCTCAGAA | 7090 |
rs1878884 | snp | C/T | 0.274661 | 0.248781 | intron-variant | TLE3 | GRCh38.p7 | 15:70066592 | TTTTTAAGCTCACAG[C/T]CCTGGCAGTGTTTGC | 7090 |
rs2133977 | snp | A/G | 0.370826 | 0.218863 | synonymous-codon | TLE3 | GRCh38.p7 | 15:70059449 | GCAGGACAGTGATGG[A/G]GACAAGAGTGATGAT | 7090 |
rs2133978 | snp | A/G | 0.461037 | 0.134028 | intron-variant | TLE3 | GRCh38.p7 | 15:70056972 | TGGGGTCAGGAAATC[A/G]AGACCAGCCTGGCCA | 7090 |
rs2173833 | snp | A/G | 0.45198 | 0.147323 | intron-variant | TLE3 | GRCh38.p7 | 15:70056800 | CGCTCCAGCTTGGGC[A/G]GCAGAGCGAGACTCC | 7090 |
rs2228176 | snp | C/G | 0.396939 | 0.203206 | synonymous-codon | TLE3 | GRCh38.p7 | 15:70060629 | CTCTGTGTCACCCTC[C/G]GAAAGCCTCCGGGCC | 7090 |
rs2228178 | snp | A/G | 0.489773 | 0.0707741 | synonymous-codon, intron-variant | TLE3 | GRCh38.p7 | 15:70054584 | CTGGGACCTGGCCTC[A/G]CCCACGCCCCGCATC | 7090 |
rs2270867 | snp | A/G | 0.113685 | 0.209567 | intron-variant | TLE3 | GRCh38.p7 | 15:70064399 | TGCTGGGAGGAGGTG[A/G]GACTCGGGGCTCCCA | 7090 |
rs2270869 | snp | C/G | 0.0111196 | 0.0737302 | intron-variant | TLE3 | GRCh38.p7 | 15:70059698 | TGTCAGTGCGGCTGC[C/G]CAGTGGGTACAGGAG | 7090 |
rs2270870 | snp | C/T | 0.449853 | 0.150196 | intron-variant | TLE3 | GRCh38.p7 | 15:70059636 | GCCTCACGGGGAGAC[C/T]GTGTTGAGCTGGAGT | 7090 |
rs2270871 | snp | C/G | 0.452227 | 0.146984 | intron-variant | TLE3 | GRCh38.p7 | 15:70056184 | TTTGCCCTGGTGCAC[C/G]TCCCTTTGGAAAGGT | 7090 |
rs2279782 | snp | C/T | 0.47614 | 0.106587 | intron-variant | TLE3 | GRCh38.p7 | 15:70051721 | AATCTTTTGAGGCAG[C/T]GTTATCACTGCAATG | 7090 |
rs2291981 | snp | A/G | 0.068603 | 0.172032 | synonymous-codon | TLE3 | GRCh38.p7 | 15:70058268 | ATCCTCCACCCCTGG[A/G]CTCAAGTCCAACACA | 7090 |
rs2291982 | snp | C/G | 0.597909 | 0.139706 | intron-variant | TLE3 | GRCh38.p7 | 15:70058118 | GGGTTAATCTGATTG[C/G]GGGGAGGGGGTCTGC | 7090 |
rs2291983 | snp | C/T | 0.154993 | 0.231244 | upstream-variant-2KB | TLE3 | GRCh38.p7 | 15:70097976 | AATGGGAGCGCGGGG[C/T]CCCCACGTGGGGCTG | 7090 |
rs2291984 | snp | A/G | 0.332568 | 0.235971 | upstream-variant-2KB | TLE3 | GRCh38.p7 | 15:70098220 | CTTTTTTTTCCCACG[A/G]TCTACTAGCAAATAA | 7090 |
rs2291985 | snp | C/G | 0.0763656 | 0.179864 | intron-variant | TLE3 | GRCh38.p7 | 15:70076201 | ACATTTCAGTGACTT[C/G]ATTTATTTGCCTGAG | 7090 |
rs2291986 | snp | A/G | 0.356386 | 0.226234 | intron-variant | TLE3 | GRCh38.p7 | 15:70076093 | CCTGTCACAAGAGGT[A/G]AGACCTTCTTTTATT | 7090 |
rs2291987 | snp | A/C | 0.117886 | 0.21224 | intron-variant | TLE3 | GRCh38.p7 | 15:70075760 | CCAGCCCAAAGTGGA[A/C]CTCAGTTCCTGGTAC | 7090 |
rs2651499 | snp | C/T | 0.216048 | 0.247684 | intron-variant, nc-transcript-variant | TLE3, LOC105370877 | GRCh38.p7 | 15:70088148 | AGCTCTGCAGCCCAC[C/T]GATTGTGCAACATCC | 7090 |
rs2927403 | snp | A/G | | | intron-variant, nc-transcript-variant | TLE3, LOC105370877 | GRCh38.p7 | 15:70087594 | GGCTCGTGTGTCTTA[A/G]GTGGTTCCTTCCATC | 7090 |
rs2937278 | snp | C/T | 0.067446 | 0.170804 | intron-variant | TLE3 | GRCh38.p7 | 15:70053508 | CGCATGGTCCCTTAG[C/T]GAGCTTGCAGCAAAG | 7090 |
rs2937279 | snp | G/T | 0.106474 | 0.205372 | intron-variant, downstream-variant-500B | TLE3, MIR629, LOC105370877 | GRCh38.p7 | 15:70079301 | AGGCCCATGTTCGAC[G/T]AAGAGAGGCCTCTCT | 7090 |
rs2937280 | snp | A/T | 0.0659589 | 0.169201 | intron-variant, upstream-variant-2KB | TLE3 | GRCh38.p7 | 15:70095946 | CGACCTAGACCCTCA[A/T]TCGGGGACCCCACGG | 7090 |
rs3195776 | snp | C/G | 0.316726 | 0.240931 | utr-variant-3-prime | TLE3 | GRCh38.p7 | 15:70048827 | AGCAGTGGGGGTTGG[C/G]GGGTGGGAGAGGGGG | 7090 |
rs3215108 | in-del | -/C | 0.444267 | 0.157354 | intron-variant | TLE3 | GRCh38.p7 | 15:70050376 | CTTTAAAGCCTCCCC[-/C]ACCTCCTCTTCACCG | 7090 |
rs3743309 | snp | A/G | 0.398174 | 0.201356 | utr-variant-3-prime | TLE3 | GRCh38.p7 | 15:70048172 | GACTGGCAAACTGGG[A/G]GGAGAGGCAATTAAG | 7090 |
rs3743310 | snp | A/G | 0.464309 | 0.12873 | intron-variant | TLE3 | GRCh38.p7 | 15:70052277 | TCCAGGGCCTAGCTT[A/G]TTCTATAAGCTTTGG | 7090 |
rs3743312 | snp | A/G | 0.358728 | 0.225118 | intron-variant | TLE3 | GRCh38.p7 | 15:70053532 | AGCAAAGCTAGCCCC[A/G]GCCTCTTTCCAGTTC | 7090 |
rs3784660 | snp | A/G | 0.110519 | 0.207473 | intron-variant | TLE3 | GRCh38.p7 | 15:70050714 | CTGGGTCCAGAAAGC[A/G]GCATGTTGGCTGAGG | 7090 |
rs3784661 | snp | A/C | 0.119281 | 0.213102 | intron-variant | TLE3 | GRCh38.p7 | 15:70066469 | AACTCCCTGCACCCC[A/C]GTTTCACAAATAATT | 7090 |
rs3784663 | snp | C/T | 0.118235 | 0.212457 | intron-variant | TLE3 | GRCh38.p7 | 15:70070403 | ATGATTTGGGTTGAA[C/T]GTAGTGAAGTTGTCT | 7090 |
rs3784664 | snp | A/G | 0.439502 | 0.163061 | intron-variant | TLE3 | GRCh38.p7 | 15:70070863 | GAGTGAATACCTTAG[A/G]TATGGCTTCAAAATA | 7090 |
rs3784665 | snp | A/G | 0.306431 | 0.243548 | intron-variant | TLE3 | GRCh38.p7 | 15:70070993 | TTAATTTCCAAGGGA[A/G]TGAAGACCAAATTGT | 7090 |
rs3784666 | snp | A/C | 0.118235 | 0.212457 | intron-variant | TLE3 | GRCh38.p7 | 15:70071080 | GATATAGCAATGTAA[A/C]AAGAGGGTTCCAGAA | 7090 |
rs3817044 | snp | A/G | 0 | 0 | intron-variant | TLE3 | GRCh38.p7 | 15:70075697 | GTCATGTCACTTTCT[A/G]CGCCTACCTTCCAAG | 7090 |
rs3817045 | snp | C/T | 0.397813 | 0.201621 | intron-variant | TLE3 | GRCh38.p7 | 15:70056129 | GGCTGGTTGCAACCC[C/T]AGGAAACTGTAGCCA | 7090 |
rs3825968 | snp | A/C | 0.419262 | 0.183984 | intron-variant | TLE3 | GRCh38.p7 | 15:70060736 | TAAGTGCAGGTGACA[A/C]GGAGGTCAGGGGAGG | 7090 |
rs3825969 | snp | A/G | 0.118235 | 0.212457 | intron-variant | TLE3 | GRCh38.p7 | 15:70070309 | GGGAAGATCTTGCTT[A/G]CAGAGTACGTGTAAT | 7090 |
rs3830411 | in-del | -/GCA | 0.34437 | 0.231505 | intron-variant | TLE3 | GRCh38.p7 | 15:70076232 | TGGGGGGAGTTTGCA[-/GCA]TTTCCACTTGCCTAT | 7090 |
rs3833024 | in-del | -/G | | | intron-variant | TLE3 | GRCh38.p7 | 15:70053605 | AGTCCCCTGGGAAAT[-/G]GGGGGGGGGAGGTGA | 7090 |
rs3837730 | in-del | -/AG | | | intron-variant | TLE3 | GRCh38.p7 | 15:70050778 | GCAAGAGAGAGAGAG[-/AG]GAAGAAAGTGTGTGG | 7090 |
rs3842342 | in-del | -/C | 0.131038 | 0.219882 | intron-variant | TLE3 | GRCh38.p7 | 15:70062920 | TAAACAGCCCAGCTC[-/C]TTGGGGGTTCCCAGG | 7090 |
rs4777224 | snp | A/C | 0.463126 | 0.13068 | intron-variant, downstream-variant-500B | TLE3 | GRCh38.p7 | 15:70052740 | GTCTCTGAGACTTTC[A/C]TCTTTCCTTAAGAAA | 7090 |
rs4777225 | snp | G/T | 0.462582 | 0.131564 | intron-variant, downstream-variant-500B | TLE3 | GRCh38.p7 | 15:70053017 | AATCGAATTTCCACA[G/T]TTGGGCCAAATGTGT | 7090 |
rs4777226 | snp | A/G | 0.462582 | 0.131564 | intron-variant, downstream-variant-500B | TLE3 | GRCh38.p7 | 15:70053021 | GAATTTCCACAGTTG[A/G]GCCAAATGTGTCCAA | 7090 |
rs4777227 | snp | A/C | 0.359545 | 0.224722 | intron-variant | TLE3 | GRCh38.p7 | 15:70055023 | TACACCAGCTGGAGG[A/C]GGCGCAGCAGCCCTG | 7090 |
rs4777228 | snp | A/G | 0.458775 | 0.137524 | intron-variant | TLE3 | GRCh38.p7 | 15:70059859 | TGGTCATTCCCACCC[A/G]TCTGTGTGGGATAGT | 7090 |
rs4777229 | snp | A/G | 0.12932 | 0.218944 | intron-variant | TLE3 | GRCh38.p7 | 15:70059872 | CCATCTGTGTGGGAT[A/G]GTAACTTGCCTCCTC | 7090 |
rs4777230 | snp | C/T | 0.178465 | 0.239547 | intron-variant | TLE3 | GRCh38.p7 | 15:70073423 | GCCTTCAGTTCCACC[C/T]TGAAATAGTGACTTC | 7090 |
rs5813573 | in-del | -/C | | | frameshift-variant, intron-variant | TLE3 | GRCh38.p7 | 15:70066198 | GGCATGGGAGAGGTG[-/C]TGCGCCTGGAGCTGC | 7090 |
rs6494841 | snp | A/G | 0.475789 | 0.107327 | intron-variant | TLE3 | GRCh38.p7 | 15:70053953 | CTGCCTTTGCGCTGC[A/G]GCACAGTCAGAGGAA | 7090 |
rs6494842 | snp | C/T | 0.25801 | 0.249872 | intron-variant, upstream-variant-2KB | TLE3, LOC105370877 | GRCh38.p7 | 15:70089673 | CCTACAAAAATGAGA[C/T]GAGGAATGAGTGCCA | 7090 |
rs6494843 | snp | A/T | 0.470327 | 0.118136 | upstream-variant-2KB | TLE3 | GRCh38.p7 | 15:70099299 | TTTTGCATCTTAATG[A/T]GGAGCTGAGAGCTAG | 7090 |
rs6494844 | snp | A/G | 0.46865 | 0.121211 | upstream-variant-2KB | TLE3 | GRCh38.p7 | 15:70099538 | GCAGCATTCATTAGA[A/G]ACAAAATGGCTCCTC | 7090 |
rs7162247 | snp | G/T | 0.00835141 | 0.0640778 | intron-variant | TLE3 | GRCh38.p7 | 15:70055388 | ATCTGCACTGCCCCC[G/T]ACTGGCTGCCCTGCC | 7090 |
rs7162712 | snp | C/T | 0.499154 | 0.0205497 | intron-variant | TLE3 | GRCh38.p7 | 15:70070221 | AAATAGGACAACGAA[C/T]ATGTACTCCACACAA | 7090 |
rs7163010 | snp | G/T | 0.43978 | 0.162738 | intron-variant | TLE3 | GRCh38.p7 | 15:70070200 | GAACATTTCCTGCCA[G/T]AGCACAAATAGGACA | 7090 |
rs7167790 | snp | C/T | 0.362104 | 0.223456 | intron-variant, downstream-variant-500B | TLE3 | GRCh38.p7 | 15:70052942 | AGGAGGGTGCTACTA[C/T]TATTTCCATCTTGTG | 7090 |
rs7168140 | snp | A/G | | | intron-variant | TLE3 | GRCh38.p7 | 15:70070567 | CTTTCACATCACTCA[A/G]TGGGCACCATAGCTC | 7090 |
rs7168144 | snp | A/G | 0.000399281 | 0.0141238 | intron-variant | TLE3 | GRCh38.p7 | 15:70070571 | CACATCACTCAGTGG[A/G]CACCATAGCTCCACA | 7090 |
rs7168833 | snp | A/C | 0.00716266 | 0.059414 | intron-variant | TLE3 | GRCh38.p7 | 15:70056766 | CTAACTCttcttttt[A/C]tttttatttttttga | 7090 |
rs7169512 | snp | G/T | 0.0626037 | 0.165477 | utr-variant-3-prime | TLE3 | GRCh38.p7 | 15:70049592 | ACACTCAGAGTTTCC[G/T]GTGGGAAGGGGCCTC | 7090 |