PSEN2
Disease associated variation - ClinVar
Allele IDTypeNameRS#dbSNPPhenotype IDsChromosomeStartStopReferenceAlternate
23884single nucleotide variantNM_000447.2(PSEN2):c.422A>T (p.Asn141Ile)63750215MedGen:C1847200,OMIM:606889;MedGen:CN2218091227073304227073304AT
23884single nucleotide variantNM_000447.2(PSEN2):c.422A>T (p.Asn141Ile)63750215MedGen:C1847200,OMIM:606889;MedGen:CN2218091226885603226885603AT
23885single nucleotide variantNM_000447.2(PSEN2):c.715A>G (p.Met239Val)28936379MedGen:C1847200,OMIM:606889;MedGen:CN2218091227076678227076678AG
23885single nucleotide variantNM_000447.2(PSEN2):c.715A>G (p.Met239Val)28936379MedGen:C1847200,OMIM:606889;MedGen:CN2218091226888977226888977AG
23886single nucleotide variantNM_000447.2(PSEN2):c.1316A>C (p.Asp439Ala)63750110MedGen:C1847200,OMIM:606889;MedGen:C0002395,OMIM:104300,SNOMED CT:C0002395;MedGen:CN2218091227083249227083249AC
23886single nucleotide variantNM_000447.2(PSEN2):c.1316A>C (p.Asp439Ala)63750110MedGen:C1847200,OMIM:606889;MedGen:C0002395,OMIM:104300,SNOMED CT:C0002395;MedGen:CN2218091226895548226895548AC
23887single nucleotide variantNM_000447.2(PSEN2):c.1289C>T (p.Thr430Met)63750666MedGen:C1847200,OMIM:606889;MedGen:CN2218091227083222227083222CT
23887single nucleotide variantNM_000447.2(PSEN2):c.1289C>T (p.Thr430Met)63750666MedGen:C1847200,OMIM:606889;MedGen:CN2218091226895521226895521CT
23888single nucleotide variantNM_000447.2(PSEN2):c.364A>C (p.Thr122Pro)63749851MedGen:C1847200,OMIM:606889;MedGen:CN2218091227073246227073246AC
23888single nucleotide variantNM_000447.2(PSEN2):c.364A>C (p.Thr122Pro)63749851MedGen:C1847200,OMIM:606889;MedGen:CN2218091226885545226885545AC
23889single nucleotide variantNM_000447.2(PSEN2):c.717G>A (p.Met239Ile)63749884MedGen:C1847200,OMIM:606889;MedGen:CN2218091227076680227076680GA
23889single nucleotide variantNM_000447.2(PSEN2):c.717G>A (p.Met239Ile)63749884MedGen:C1847200,OMIM:606889;MedGen:CN2218091226888979226888979GA
23890single nucleotide variantNM_000447.2(PSEN2):c.365C>G (p.Thr122Arg)28936380MedGen:C1847200,OMIM:606889;MedGen:CN2218091227073247227073247CG
23890single nucleotide variantNM_000447.2(PSEN2):c.365C>G (p.Thr122Arg)28936380MedGen:C1847200,OMIM:606889;MedGen:CN2218091226885546226885546CG
23891single nucleotide variantNM_000447.2(PSEN2):c.389C>T (p.Ser130Leu)63750197MedGen:C1847200,OMIM:606889;MedGen:C0002395,OMIM:104300,SNOMED CT:C0002395;MedGen:C3150958,OMIM:613697;MedGen:CN2218091227073271227073271CT
23891single nucleotide variantNM_000447.2(PSEN2):c.389C>T (p.Ser130Leu)63750197MedGen:C1847200,OMIM:606889;MedGen:C0002395,OMIM:104300,SNOMED CT:C0002395;MedGen:C3150958,OMIM:613697;MedGen:CN2218091226885570226885570CT
23892single nucleotide variantNM_000447.2(PSEN2):c.254C>T (p.Ala85Val)63750048MedGen:C1847200,OMIM:606889;MedGen:CN2218091227071518227071518CT
23892single nucleotide variantNM_000447.2(PSEN2):c.254C>T (p.Ala85Val)63750048MedGen:C1847200,OMIM:606889;MedGen:CN2218091226883817226883817CT
103887single nucleotide variantNM_000447.2(PSEN2):c.185G>A (p.Arg62His)58973334MedGen:C0002395,OMIM:104300,SNOMED CT:C0002395;MedGen:CN239310;MedGen:CN043596;MedGen:CN2218091227071449227071449GA
103887single nucleotide variantNM_000447.2(PSEN2):c.185G>A (p.Arg62His)58973334MedGen:C0002395,OMIM:104300,SNOMED CT:C0002395;MedGen:CN239310;MedGen:CN043596;MedGen:CN2218091226883748226883748GA
103888single nucleotide variantNM_000447.2(PSEN2):c.442G>A (p.Val148Ile)63750812MedGen:CN2218091227073324227073324GA
103888single nucleotide variantNM_000447.2(PSEN2):c.442G>A (p.Val148Ile)63750812MedGen:CN2218091226885623226885623GA
103889single nucleotide variantNM_000447.2(PSEN2):c.683A>T (p.Gln228Leu)63750880MedGen:CN2218091227076646227076646AT
103889single nucleotide variantNM_000447.2(PSEN2):c.683A>T (p.Gln228Leu)63750880MedGen:CN2218091226888945226888945AT
103890single nucleotide variantNM_000447.2(PSEN2):c.1001C>G (p.Pro334Arg)63750207MedGen:CN2218091227079474227079474CG
103890single nucleotide variantNM_000447.2(PSEN2):c.1001C>G (p.Pro334Arg)63750207MedGen:CN2218091226891773226891773CG
178440single nucleotide variantNM_000447.2(PSEN2):c.149A>G (p.Gln50Arg)143501870MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:C00071931227071413227071413AG
178440single nucleotide variantNM_000447.2(PSEN2):c.149A>G (p.Gln50Arg)143501870MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:C00071931226883712226883712AG
189385single nucleotide variantNM_000447.2(PSEN2):c.25A>G (p.Ser9Gly)786205285MedGen:CN2218091226881932226881932AG
189385single nucleotide variantNM_000447.2(PSEN2):c.25A>G (p.Ser9Gly)786205285MedGen:CN2218091227069633227069633AG
189386single nucleotide variantNM_000447.2(PSEN2):c.49C>T (p.Arg17Trp)199644116MedGen:CN2218091227069657227069657CT
189386single nucleotide variantNM_000447.2(PSEN2):c.49C>T (p.Arg17Trp)199644116MedGen:CN2218091226881956226881956CT
189387single nucleotide variantNM_000447.2(PSEN2):c.166G>A (p.Gly56Ser)188598190MedGen:CN2218091227071430227071430GA
189387single nucleotide variantNM_000447.2(PSEN2):c.166G>A (p.Gly56Ser)188598190MedGen:CN2218091226883729226883729GA
189388single nucleotide variantNM_000447.2(PSEN2):c.205C>G (p.Pro69Ala)202133351MedGen:CN2218091226883768226883768CG
189388single nucleotide variantNM_000447.2(PSEN2):c.205C>G (p.Pro69Ala)202133351MedGen:CN2218091227071469227071469CG
189389single nucleotide variantNM_000447.2(PSEN2):c.208G>A (p.Gly70Arg)139972151MedGen:CN2218091227071472227071472GA
189389single nucleotide variantNM_000447.2(PSEN2):c.208G>A (p.Gly70Arg)139972151MedGen:CN2218091226883771226883771GA
189390single nucleotide variantNM_000447.2(PSEN2):c.211C>T (p.Arg71Trp)140501902MedGen:CN1693741227071475227071475CT
189390single nucleotide variantNM_000447.2(PSEN2):c.211C>T (p.Arg71Trp)140501902MedGen:CN1693741226883774226883774CT
189391single nucleotide variantNM_000447.2(PSEN2):c.710C>T (p.Ala237Val)200670135MedGen:CN2218091227076673227076673CT
189391single nucleotide variantNM_000447.2(PSEN2):c.710C>T (p.Ala237Val)200670135MedGen:CN2218091226888972226888972CT
189392single nucleotide variantNM_000447.2(PSEN2):c.1139C>A (p.Thr380Lys)143912759MedGen:CN2218091227081774227081774CA
189392single nucleotide variantNM_000447.2(PSEN2):c.1139C>A (p.Thr380Lys)143912759MedGen:CN2218091226894073226894073CA
249746single nucleotide variantNM_000447.2(PSEN2):c.69T>C (p.Ala23=)11405MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741226881976226881976TC
249746single nucleotide variantNM_000447.2(PSEN2):c.69T>C (p.Ala23=)11405MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741227069677227069677TC
249747single nucleotide variantNM_000447.2(PSEN2):c.129C>T (p.Asn43=)6759MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741226882036226882036CT
249747single nucleotide variantNM_000447.2(PSEN2):c.129C>T (p.Asn43=)6759MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741227069737227069737CT
249748single nucleotide variantNM_000447.2(PSEN2):c.261C>T (p.His87=)1046240MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741226883824226883824CT
249748single nucleotide variantNM_000447.2(PSEN2):c.261C>T (p.His87=)1046240MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741227071525227071525CT
249749single nucleotide variantNM_000447.2(PSEN2):c.366G>A (p.Thr122=)148996705MedGen:CN1693741226885547226885547GA
249749single nucleotide variantNM_000447.2(PSEN2):c.366G>A (p.Thr122=)148996705MedGen:CN1693741227073248227073248GA
249750single nucleotide variantNM_000447.2(PSEN2):c.441C>T (p.Ser147=)114334281MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741226885622226885622CT
249750single nucleotide variantNM_000447.2(PSEN2):c.441C>T (p.Ser147=)114334281MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741227073323227073323CT
249751single nucleotide variantNM_000447.2(PSEN2):c.708T>C (p.Ser236=)61730652MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741226888970226888970TC
249751single nucleotide variantNM_000447.2(PSEN2):c.708T>C (p.Ser236=)61730652MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741227076671227076671TC
249752single nucleotide variantNM_000447.2(PSEN2):c.756G>C (p.Ala252=)147702142MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741226889018226889018GC
249752single nucleotide variantNM_000447.2(PSEN2):c.756G>C (p.Ala252=)147702142MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741227076719227076719GC
249753single nucleotide variantNM_000447.2(PSEN2):c.903G>T (p.Thr301=)6426553MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741226891294226891294GT
249753single nucleotide variantNM_000447.2(PSEN2):c.903G>T (p.Thr301=)6426553MedGen:CN239310;MedGen:CN043596;MedGen:CN1693741227078995227078995GT
279384single nucleotide variantNM_000447.2(PSEN2):c.-144A>G886046061MedGen:CN239310;MedGen:CN0435961226875427226875427AG
279384single nucleotide variantNM_000447.2(PSEN2):c.-144A>G886046061MedGen:CN239310;MedGen:CN0435961227063128227063128AG
279385single nucleotide variantNM_000447.2(PSEN2):c.38T>C (p.Val13Ala)766853710MedGen:CN239310;MedGen:CN0435961226881945226881945TC
279385single nucleotide variantNM_000447.2(PSEN2):c.38T>C (p.Val13Ala)766853710MedGen:CN239310;MedGen:CN0435961227069646227069646TC
279389single nucleotide variantNM_000447.2(PSEN2):c.222C>G (p.Gly74=)773522773MedGen:CN239310;MedGen:CN0435961226883785226883785CG
279389single nucleotide variantNM_000447.2(PSEN2):c.222C>G (p.Gly74=)773522773MedGen:CN239310;MedGen:CN0435961227071486227071486CG
279393single nucleotide variantNM_000447.2(PSEN2):c.954C>T (p.Pro318=)199587016MedGen:CN239310;MedGen:CN0435961226891345226891345CT
279393single nucleotide variantNM_000447.2(PSEN2):c.954C>T (p.Pro318=)199587016MedGen:CN239310;MedGen:CN0435961227079046227079046CT
279394single nucleotide variantNM_000447.2(PSEN2):c.*306G>A145129440MedGen:CN239310;MedGen:CN0435961226895885226895885GA
279394single nucleotide variantNM_000447.2(PSEN2):c.*306G>A145129440MedGen:CN239310;MedGen:CN0435961227083586227083586GA
279399single nucleotide variantNM_000447.2(PSEN2):c.*405G>T116807339MedGen:CN239310;MedGen:CN0435961226895984226895984GT
279399single nucleotide variantNM_000447.2(PSEN2):c.*405G>T116807339MedGen:CN239310;MedGen:CN0435961227083685227083685GT
279627single nucleotide variantNM_000447.2(PSEN2):c.-43C>T7961MedGen:CN239310;MedGen:CN0435961226875528226875528CT
279627single nucleotide variantNM_000447.2(PSEN2):c.-43C>T7961MedGen:CN239310;MedGen:CN0435961227063229227063229CT
279635single nucleotide variantNM_000447.2(PSEN2):c.690C>G (p.Ala230=)145010538MedGen:CN239310;MedGen:CN0435961226888952226888952CG
279635single nucleotide variantNM_000447.2(PSEN2):c.690C>G (p.Ala230=)145010538MedGen:CN239310;MedGen:CN0435961227076653227076653CG
279636single nucleotide variantNM_000447.2(PSEN2):c.937G>A (p.Gly313Ser)756225509MedGen:CN239310;MedGen:CN0435961226891328226891328GA
279636single nucleotide variantNM_000447.2(PSEN2):c.937G>A (p.Gly313Ser)756225509MedGen:CN239310;MedGen:CN0435961227079029227079029GA
279637single nucleotide variantNM_000447.2(PSEN2):c.1077C>T (p.Gly359=)753503617MedGen:CN239310;MedGen:CN0435961226894011226894011CT
279637single nucleotide variantNM_000447.2(PSEN2):c.1077C>T (p.Gly359=)753503617MedGen:CN239310;MedGen:CN0435961227081712227081712CT
279638single nucleotide variantNM_000447.2(PSEN2):c.*103C>T571670427MedGen:CN239310;MedGen:CN0435961226895682226895682CT
279638single nucleotide variantNM_000447.2(PSEN2):c.*103C>T571670427MedGen:CN239310;MedGen:CN0435961227083383227083383CT
279639single nucleotide variantNM_000447.2(PSEN2):c.*120G>A143059995MedGen:CN239310;MedGen:CN0435961226895699226895699GA
279639single nucleotide variantNM_000447.2(PSEN2):c.*120G>A143059995MedGen:CN239310;MedGen:CN0435961227083400227083400GA
279642single nucleotide variantNM_000447.2(PSEN2):c.*132T>C186288674MedGen:CN239310;MedGen:CN0435961226895711226895711TC
279642single nucleotide variantNM_000447.2(PSEN2):c.*132T>C186288674MedGen:CN239310;MedGen:CN0435961227083412227083412TC
280901single nucleotide variantNM_000447.2(PSEN2):c.-356A>G12758915MedGen:CN239310;MedGen:CN0435961226870643226870643AG
280901single nucleotide variantNM_000447.2(PSEN2):c.-356A>G12758915MedGen:CN239310;MedGen:CN0435961227058344227058344AG
280903single nucleotide variantNM_000447.2(PSEN2):c.-338A>G6665033MedGen:CN239310;MedGen:CN0435961226871273226871273AG
280903single nucleotide variantNM_000447.2(PSEN2):c.-338A>G6665033MedGen:CN239310;MedGen:CN0435961227058974227058974AG
280906single nucleotide variantNM_000447.2(PSEN2):c.-275C>T1295645MedGen:CN239310;MedGen:CN0435961226871336226871336CT
280906single nucleotide variantNM_000447.2(PSEN2):c.-275C>T1295645MedGen:CN239310;MedGen:CN0435961227059037227059037CT
280914single nucleotide variantNM_000447.2(PSEN2):c.861C>T (p.Pro287=)75733498MedGen:CN239310;MedGen:CN0435961226890108226890108CT
280914single nucleotide variantNM_000447.2(PSEN2):c.861C>T (p.Pro287=)75733498MedGen:CN239310;MedGen:CN0435961227077809227077809CT
280915single nucleotide variantNM_000447.2(PSEN2):c.*72T>C886046062MedGen:CN239310;MedGen:CN0435961226895651226895651TC
280915single nucleotide variantNM_000447.2(PSEN2):c.*72T>C886046062MedGen:CN239310;MedGen:CN0435961227083352227083352TC
280916single nucleotide variantNM_000447.2(PSEN2):c.*487G>C7962MedGen:CN239310;MedGen:CN0435961226896066226896066GC
280916single nucleotide variantNM_000447.2(PSEN2):c.*487G>C7962MedGen:CN239310;MedGen:CN0435961227083767227083767GC
281045single nucleotide variantNM_000447.2(PSEN2):c.-400C>T186308126MedGen:CN239310;MedGen:CN0435961226870599226870599CT
281045single nucleotide variantNM_000447.2(PSEN2):c.-400C>T186308126MedGen:CN239310;MedGen:CN0435961227058300227058300CT
281046single nucleotide variantNM_000447.2(PSEN2):c.-278C>T199532840MedGen:CN239310;MedGen:CN0435961226871333226871333CT
281046single nucleotide variantNM_000447.2(PSEN2):c.-278C>T199532840MedGen:CN239310;MedGen:CN0435961227059034227059034CT
281047single nucleotide variantNM_000447.2(PSEN2):c.-82T>C200607063MedGen:CN239310;MedGen:CN0435961226875489226875489TC
281047single nucleotide variantNM_000447.2(PSEN2):c.-82T>C200607063MedGen:CN239310;MedGen:CN0435961227063190227063190TC
281053single nucleotide variantNM_000447.2(PSEN2):c.336C>T (p.Tyr112=)200610057MedGen:CN239310;MedGen:CN0435961226883899226883899CT
281053single nucleotide variantNM_000447.2(PSEN2):c.336C>T (p.Tyr112=)200610057MedGen:CN239310;MedGen:CN0435961227071600227071600CT
281056single nucleotide variantNM_000447.2(PSEN2):c.410A>G (p.Asn137Ser)749301595MedGen:CN239310;MedGen:CN0435961226885591226885591AG
281056single nucleotide variantNM_000447.2(PSEN2):c.410A>G (p.Asn137Ser)749301595MedGen:CN239310;MedGen:CN0435961227073292227073292AG
281057single nucleotide variantNM_000447.2(PSEN2):c.*20G>A201399057MedGen:CN239310;MedGen:CN0435961226895599226895599GA
281057single nucleotide variantNM_000447.2(PSEN2):c.*20G>A201399057MedGen:CN239310;MedGen:CN0435961227083300227083300GA
281058single nucleotide variantNM_000447.2(PSEN2):c.*270C>T8383MedGen:CN239310;MedGen:CN0435961226895849226895849CT
281058single nucleotide variantNM_000447.2(PSEN2):c.*270C>T8383MedGen:CN239310;MedGen:CN0435961227083550227083550CT
281061single nucleotide variantNM_000447.2(PSEN2):c.*377C>T202160009MedGen:CN239310;MedGen:CN0435961226895956226895956CT
281061single nucleotide variantNM_000447.2(PSEN2):c.*377C>T202160009MedGen:CN239310;MedGen:CN0435961227083657227083657CT
353095single nucleotide variantNM_000447.2(PSEN2):c.*536G>A16846619MedGen:CN239310;MedGen:CN0435961227083816227083816GA
353095single nucleotide variantNM_000447.2(PSEN2):c.*536G>A16846619MedGen:CN239310;MedGen:CN0435961226896115226896115GA
Disease associated variation - GWAS Central
Study NameSource Marker AccessionChromosomeMarker StartMarker StopAllelesGene SectionP-value-log(p-value)
GWAS of prostate cancerrs12956401227070378227070378intronic0.6138880.211910855925321
GWAS of prostate cancerrs28022681227084660227084660downstream0.3524150.452945614792939
GWAS of prostate cancerrs20734891227063671227063671intronic0.1111160.954223400902506
Disease associated variation - OMIM
Ensembl_gene_ID Approved Gene Symbol MIM Number
ENSG00000143801.16 PSEN2 600759