SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs892752 | snp | C/T | 0.0923359 | 0.194016 | intron-variant | TRIM4 | GRCh38.p7 | 7:99899044 | cttgaatggccccca[C/T]attcttatcacgtca | 89122 |
rs1048705 | snp | A/T | 0.487684 | 0.0775019 | utr-variant-3-prime | TRIM4 | GRCh38.p7 | 7:99891317 | CAGTGAGATGGAAAG[A/T]CAAATCCTATTTGTA | 89122 |
rs1138665 | snp | A/T | 0 | 0 | intron-variant | TRIM4 | GRCh38.p7 | 7:99896239 | ggaccatagggtcat[A/T]gttagggtatgcttg | 89122 |
rs1865472 | snp | A/T | 0.436265 | 0.166749 | intron-variant | TRIM4 | GRCh38.p7 | 7:99913940 | gtcttcattttatag[A/T]taaggaagccttgat | 89122 |
rs2247761 | snp | C/T | 0.491465 | 0.0647671 | synonymous-codon | TRIM4 | GRCh38.p7 | 7:99903288 | GGATGTGAACTATTC[C/T]CTTGAAGCTGTAAAG | 89122 |
rs2247762 | snp | A/G | 0.484539 | 0.0865542 | synonymous-codon | TRIM4 | GRCh38.p7 | 7:99903276 | TTCTCTTGAAGCTGT[A/G]AAGGTGAAGACAGTG | 89122 |
rs2527909 | snp | A/C | 0.487684 | 0.0775019 | intron-variant | TRIM4 | GRCh38.p7 | 7:99914601 | gggaaaggtggcatg[A/C]gatgtgaaacgagat | 89122 |
rs2527911 | snp | C/T | 0.483636 | 0.0889627 | intron-variant | TRIM4 | GRCh38.p7 | 7:99906002 | gtgtgccaccacacc[C/T]ggctaatttttctat | 89122 |
rs2527912 | snp | A/C | 0.436408 | 0.16659 | intron-variant | TRIM4 | GRCh38.p7 | 7:99902419 | tctctactaaaatac[A/C]aaaattagctgagca | 89122 |
rs2527913 | snp | A/T | 0.487621 | 0.0776941 | intron-variant | TRIM4 | GRCh38.p7 | 7:99902249 | aaaaaacaaacaaac[A/T]aaaaagaaCCATGTT | 89122 |
rs2527914 | snp | C/T | 0.483345 | 0.0897213 | intron-variant | TRIM4 | GRCh38.p7 | 7:99900522 | GAAATGGTAATGACA[C/T]GAATAAATATATATT | 89122 |
rs2527915 | snp | G/T | 0.487621 | 0.0776941 | intron-variant | TRIM4 | GRCh38.p7 | 7:99900395 | attttgggtgttttt[G/T]tgagggtgattttgg | 89122 |
rs2527916 | snp | A/T | 0.499587 | 0.0143711 | intron-variant | TRIM4 | GRCh38.p7 | 7:99900334 | tgtagactgcccttc[A/T]taatgtgggtgggcc | 89122 |
rs2527918 | snp | A/C | 0.450105 | 0.149859 | intron-variant | TRIM4 | GRCh38.p7 | 7:99897849 | CATTCTGAGAGCACC[A/C]CCCCTGGCAGTGGCC | 89122 |
rs2527919 | snp | A/G | 0.487621 | 0.0776941 | intron-variant | TRIM4 | GRCh38.p7 | 7:99896890 | CAGTCAGGACTGGCC[A/G]GCCAACTGCAGCTGC | 89122 |
rs2527920 | snp | C/G | 0.449853 | 0.150196 | intron-variant | TRIM4 | GRCh38.p7 | 7:99896257 | tgaacccacattcta[C/G]ttggaccatagggtc | 89122 |
rs2527921 | snp | C/G | 0.487621 | 0.0776941 | intron-variant | TRIM4 | GRCh38.p7 | 7:99895647 | tcacaattacgtttg[C/G]agttttcagtacctt | 89122 |
rs2527922 | snp | C/T | 0.487621 | 0.0776941 | intron-variant | TRIM4 | GRCh38.p7 | 7:99895133 | tccaccttaagacac[C/T]agagaaagaggagca | 89122 |
rs2571994 | snp | G/T | 0.488545 | 0.074807 | | | GRCh38.p7 | 7:99920648 | ATTATAGGAAAGGCA[G/T]TATTTGATATTGGGA | 89122 |
rs2571995 | snp | C/G | 0.43655 | 0.16643 | | | GRCh38.p7 | 7:99920468 | GTTTCAGCCAATCAC[C/G]GCCGAGCTTCAGCAA | 89122 |
rs2571996 | snp | A/G | 0.483418 | 0.0895317 | | | GRCh38.p7 | 7:99917477 | ccaccttggcctccc[A/G]aagtgctgggattac | 89122 |
rs2571997 | snp | G/T | 0.487684 | 0.0775019 | | | GRCh38.p7 | 7:99916794 | GGAATGATATGATCG[G/T]TTTTTTTGTTTTAGA | 89122 |
rs2571998 | snp | C/T | 0.487621 | 0.0776941 | | | GRCh38.p7 | 7:99913749 | GTTTTCATATACGTA[C/T]AATTTTCTGGTGCTA | 89122 |
rs2571999 | snp | A/T | 0.487558 | 0.0778863 | | | GRCh38.p7 | 7:99913227 | CCAGTTTAGATTCCA[A/T]CTGTGGCCAGATTGA | 89122 |
rs2572000 | snp | A/G | 0.436123 | 0.166908 | | | GRCh38.p7 | 7:99911701 | ggtagcatttcattc[A/G]cctgctaatgttgtg | 89122 |
rs2572001 | snp | A/C | 0.297521 | 0.245442 | | | GRCh38.p7 | 7:99909730 | AAAAAAAAAAAAAAA[A/C]CAAAAAGAAAAAAGA | 89122 |
rs2572002 | snp | C/T | 0.437118 | 0.165792 | | | GRCh38.p7 | 7:99907431 | GCAAAGTTAGGGAAA[C/T]GATTAAAAAAGATGA | 89122 |
rs2572003 | snp | A/T | 0.487621 | 0.0776941 | | | GRCh38.p7 | 7:99903690 | TGTGACATGAGCAAA[A/T]GCAACCGTCAGAAAA | 89122 |
rs2572004 | snp | G/T | 0.00874735 | 0.0655527 | | | GRCh38.p7 | 7:99902889 | AAATTCAGAGGAAGG[G/T]CTCTGTTGGGGGCGA | 89122 |
rs2572005 | snp | C/T | 0.487621 | 0.0776941 | | | GRCh38.p7 | 7:99896407 | aacctccatttaacc[C/T]gaatcaaagggcctt | 89122 |
rs2572006 | snp | C/T | 0.487558 | 0.0778863 | | | GRCh38.p7 | 7:99896188 | tctgccatacGatac[C/T]ataaaccttaaacca | 89122 |
rs2572007 | snp | G/T | 0.165289 | 0.235211 | | | GRCh38.p7 | 7:99894673 | ttttctttttttttt[G/T]gggggggggatggag | 89122 |
rs2572008 | snp | A/T | 0.487746 | 0.0773096 | | | GRCh38.p7 | 7:99893333 | CCAAATTTTAGGCTG[A/T]TTGTGAAAACTTGGG | 89122 |
rs2572009 | snp | C/T | 0.483563 | 0.0891524 | | | GRCh38.p7 | 7:99891382 | AACGCTTGTTAAATA[C/T]CTTTTGCTAGCCTCT | 89122 |
rs2572010 | snp | A/G | 0.488606 | 0.0746142 | | | GRCh38.p7 | 7:99890920 | TCTCCCAGATTTTCA[A/G]TAAAGACTTTCAGGC | 89122 |
rs2897031 | snp | A/G | 0.0584853 | 0.160693 | intron-variant | TRIM4 | GRCh38.p7 | 7:99898554 | TCGTCTTCACCTGCC[A/G]GACACATTCTGTCCC | 89122 |
rs3220811 | microsatellite | (CA)22/23/24/25/26 | 0.593066 | 0.127205 | intron-variant | TRIM4 | GRCh38.p7 | 7:99909127 | ACAGATGAATGGATG[(CA)22/23/24/25/26]CTCCTAAAGATTTGG | 89122 |
rs4727439 | snp | A/C | 0.450105 | 0.149859 | intron-variant | TRIM4 | GRCh38.p7 | 7:99912611 | TTTGTTTGCAATTGA[A/C]TTTTAAAAGCATCAA | 89122 |
rs6957718 | snp | A/T | 0.281841 | 0.247964 | intron-variant | TRIM4 | GRCh38.p7 | 7:99892878 | CCACTGCTGCCCAAC[A/T]GATCCTCAGCCAGGC | 89122 |
rs7781442 | snp | A/G | 0.434976 | 0.168179 | intron-variant | TRIM4 | GRCh38.p7 | 7:99907600 | TATGTACTTGCAACT[A/G]CATTGCTTAAGCATG | 89122 |
rs7787525 | snp | A/G | 0.281841 | 0.247964 | intron-variant | TRIM4 | GRCh38.p7 | 7:99896037 | ttattagtatgatta[A/G]atttgtgtctattat | 89122 |
rs7801568 | snp | A/G | 0.0551013 | 0.156571 | intron-variant | TRIM4 | GRCh38.p7 | 7:99904488 | gaaaataaaatgaat[A/G]ctaggtaaaaactga | 89122 |
rs7809747 | snp | C/G | 0.483418 | 0.0895317 | intron-variant, upstream-variant-2KB | TRIM4, LOC101927610 | GRCh38.p7 | 7:99918359 | atcacttgaggtcag[C/G]agttcgagaccagcc | 89122 |
rs9690545 | snp | C/T | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99914807 | CTTTTTCtttttttc[C/T]ttttttctttttttt | 89122 |
rs10236432 | snp | C/T | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99914808 | tttttctttttttct[C/T]tttttcttttttttt | 89122 |
rs10245980 | snp | A/G | 0 | 0 | intron-variant | TRIM4 | GRCh38.p7 | 7:99896657 | cagcaggaggttgga[A/G]aaaattccacgagtg | 89122 |
rs10246091 | snp | A/G | 0 | 0 | intron-variant | TRIM4 | GRCh38.p7 | 7:99896749 | atgtggggcccaata[A/G]ccactatccttgatg | 89122 |
rs10271594 | snp | C/T | 0 | 0 | intron-variant | TRIM4 | GRCh38.p7 | 7:99912986 | TTCAATTATAACTGC[C/T]GCTTTGTGGTCACTG | 89122 |
rs10464605 | snp | A/C | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99913234 | GGCCACAGTTGGAAT[A/C]TAAACTGGGAGGTGA | 89122 |
rs10808114 | snp | A/T | 0.487621 | 0.0776941 | intron-variant | TRIM4 | GRCh38.p7 | 7:99900876 | AAGATTTTCTTTTTA[A/T]CACTGGTTTCCAGCA | 89122 |
rs11539679 | snp | C/T | | | missense, upstream-variant-2KB | TRIM4, LOC101927610 | GRCh38.p7 | 7:99919151 | TGGGCCCCGTGCCCC[C/T]GGGCCTGTGCGGCCG | 89122 |
rs11539682 | snp | C/T | | | utr-variant-3-prime | TRIM4 | GRCh38.p7 | 7:99890979 | ACTTTAATTTTTATA[C/T]TTTTTGCATCTTACA | 89122 |
rs11980179 | snp | C/T | 0.283158 | 0.247791 | intron-variant | TRIM4 | GRCh38.p7 | 7:99905919 | cgaagccaaggcagg[C/T]ggatcactcgaggtc | 89122 |
rs12536945 | snp | C/T | 0.0248432 | 0.108648 | intron-variant | TRIM4 | GRCh38.p7 | 7:99895849 | TACTAATATACCCAC[C/T]CCAGATCTATtaaca | 89122 |
rs12537676 | snp | C/T | 0.0356815 | 0.128715 | intron-variant | TRIM4 | GRCh38.p7 | 7:99896972 | acttacaagatgagc[C/T]gcaactagggagata | 89122 |
rs12666007 | snp | A/G | 0.000798403 | 0.0199641 | utr-variant-3-prime | TRIM4 | GRCh38.p7 | 7:99891346 | TGAGTTGTGATGAGA[A/G]TCATATGCAACAGCA | 89122 |
rs12667341 | snp | C/T | | | intron-variant, upstream-variant-2KB | TRIM4, LOC101927610 | GRCh38.p7 | 7:99918188 | tagccatacaagcac[C/T]tgaaacgtggatatt | 89122 |
rs12670351 | snp | C/G | 0.0209421 | 0.100162 | intron-variant | TRIM4 | GRCh38.p7 | 7:99898532 | gggctggtagatgca[C/G]ctggggtcgtcttca | 89122 |
rs13232037 | snp | C/T | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99906699 | TTTAAAaaaaaacag[C/T]tgggggcggtggctc | 89122 |
rs13232044 | snp | C/G | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99906706 | aaaaacagctggggg[C/G]ggtggctcacacctg | 89122 |
rs13235389 | snp | A/C | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99907232 | aagtgattctcctgc[A/C]tcagcctcccaagta | 89122 |
rs13246364 | snp | G/T | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99906700 | TTAAAaaaaaacagc[G/T]gggggcggtggctca | 89122 |
rs13310326 | snp | C/T | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99893370 | ATTAACAAATTCTCA[C/T]GTTGAATCAAAACTA | 89122 |
rs17277546 | snp | A/G | 0.0333695 | 0.124785 | utr-variant-3-prime | TRIM4 | GRCh38.p7 | 7:99891948 | TCCCAAAAGCGTCTT[A/G]GAAAATTTCCTGTCC | 89122 |
rs28360802 | snp | C/T | 0.00358779 | 0.0422022 | intron-variant | TRIM4 | GRCh38.p7 | 7:99894430 | CAATGCTTTGGGAGG[C/T]CAAGGCAGTGGATTA | 89122 |
rs28477519 | snp | A/G | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99906427 | AAACTCCTGAGCTCA[A/G]GAGATCCTCCCATCT | 89122 |
rs28548943 | snp | G/T | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99909728 | CTTCTTTTTTCTTTT[G/T]GTTTTTTTTTTTTTT | 89122 |
rs28847643 | snp | A/T | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99905036 | ACGCTGTCTAAAAAA[A/T]AAAAAATAAAAATTA | 89122 |
rs33998596 | snp | C/G | 0.113619 | 0.209524 | missense | TRIM4 | GRCh38.p7 | 7:99892245 | ACACCTTTTCTTGTT[C/G]TTCTGTCTCACGCCT | 89122 |
rs34083877 | in-del | -/G | | | utr-variant-3-prime | TRIM4 | GRCh38.p7 | 7:99891828 | ACGGCAACAAAAACT[-/G]CTGTTTCTTCTACCT | 89122 |
rs34275396 | in-del | -/A | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99905239 | GCAACTGGAACTCTT[-/A]ATTTTACACACTGGT | 89122 |
rs34277597 | snp | A/T | 0.486398 | 0.0813386 | intron-variant | TRIM4 | GRCh38.p7 | 7:99912544 | ATTAAAAAAAAAAAA[A/T]AATACCATAAACAAA | 89122 |
rs34293437 | snp | A/G | 0 | 0 | intron-variant | TRIM4 | GRCh38.p7 | 7:99911819 | AAACATGTACCCATA[A/G]ATAGACCTGTACAAG | 89122 |
rs34360797 | in-del | -/T | 0.450357 | 0.149522 | intron-variant | TRIM4 | GRCh38.p7 | 7:99900709 | TGTTTTTGAAGGATA[-/T]TTTTTTGCCAGTTCT | 89122 |
rs34395561 | snp | C/G | 0.0240643 | 0.107019 | intron-variant | TRIM4 | GRCh38.p7 | 7:99908525 | ACATTCAGCTCTAAA[C/G]ACAAGAGAGAGTTCA | 89122 |
rs34402397 | snp | C/T | 0.00143823 | 0.0267777 | synonymous-codon | TRIM4 | GRCh38.p7 | 7:99892700 | TCCCAAACTCGTCTT[C/T]TCCCAGGAAGGGAGA | 89122 |
rs34698695 | in-del | -/C | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99916154 | TTTAAGGGCTATGTT[-/C]CCCCTTTCATACCCA | 89122 |
rs34914690 | in-del | -/A | 0.495407 | 0.0477027 | intron-variant | TRIM4 | GRCh38.p7 | 7:99912531 | ATTAAAAAAAAAAAA[-/A]TAATACCATAAACAA | 89122 |
rs34997124 | in-del | -/C | | | upstream-variant-2KB, nc-transcript-variant | TRIM4, LOC101927610 | GRCh38.p7 | 7:99921463 | AGTAGCACCTAGTGT[-/C]CCCTGCACCACCGTT | 89122 |
rs35432946 | snp | C/T | 0.113882 | 0.209695 | missense | TRIM4 | GRCh38.p7 | 7:99892567 | AGATTTCAGCACTTA[C/T]CCTGTGTTCTGGGAA | 89122 |
rs35520899 | in-del | -/A | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99916284 | GTTTCCCAAGCTTCT[-/A]CTTTGTGCCTTTTTT | 89122 |
rs35926610 | in-del | -/A | | | upstream-variant-2KB, intron-variant | TRIM4, LOC101927610 | GRCh38.p7 | 7:99920281 | GCAGCACTCAGAACC[-/A]AAAAGAGGTTCAGAG | 89122 |
rs35959826 | in-del | -/C | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99901828 | CTGATCAGAACTCTG[-/C]CCAAACAACTAGGAA | 89122 |
rs35997738 | in-del | -/A | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99895932 | TGTTTCTTTTCCAGT[-/A]AAAAATTGGGTCTTA | 89122 |
rs36063762 | in-del | -/G | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99911571 | TAACAATTACTAATA[-/G]GGTATAACTTTTCAT | 89122 |
rs41280953 | snp | A/G | 0.0923359 | 0.194016 | intron-variant | TRIM4 | GRCh38.p7 | 7:99902974 | GAGTGCTGTGTGTCT[A/G]TCTCTCCAATGTGCT | 89122 |
rs56337108 | snp | C/T | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99897913 | CCTTTCTTGTACCCA[C/T]TAAACATCTCACCTG | 89122 |
rs56337765 | snp | C/G | 0.00557542 | 0.0525036 | intron-variant | TRIM4 | GRCh38.p7 | 7:99893172 | CTGGGGAGGCTGAGG[C/G]AGAAGAATCACTTAA | 89122 |
rs57028043 | snp | A/G | 0.0337553 | 0.125452 | intron-variant | TRIM4 | GRCh38.p7 | 7:99898208 | TCCACCTAGTATGGG[A/G]GCAGGTTAGTGCTAC | 89122 |
rs57128906 | snp | A/T | 0.0391387 | 0.134304 | intron-variant | TRIM4 | GRCh38.p7 | 7:99904351 | AAATACCTGACCAAC[A/T]CTCCTCAAAACTTTC | 89122 |
rs57799977 | in-del | -/TAAA/TAAATAAA | | | intron-variant | TRIM4 | GRCh38.p7 | 7:99913697 | AAATAAATAAATAAA[-/TAAA/TAAATAAA]AATAATAATTTTTTT | 89122 |
rs57960671 | in-del | -/TGTGTG/TGTGTGTG | 0 | 0 | intron-variant | TRIM4 | GRCh38.p7 | 7:99909158 | GTGTGTGTGTGTGTG[-/TGTGTG/TGTGTGTG]CGTGTGTGTGTGCAT | 89122 |
rs58242927 | in-del | -/T | 0 | 0 | intron-variant | TRIM4 | GRCh38.p7 | 7:99909750 | TTTTTTTTTTTTTTT[-/T]GAGACAAAGTCTCAC | 89122 |
rs58730747 | snp | C/T | 0.0391387 | 0.134304 | intron-variant | TRIM4 | GRCh38.p7 | 7:99914405 | AAGCAATCCTCCTGC[C/T]TCAGCCTCCCAAAGT | 89122 |
rs58750403 | snp | C/T | 0.0333695 | 0.124785 | intron-variant | TRIM4 | GRCh38.p7 | 7:99908282 | ATTGTTTAATAATTA[C/T]AAATGTACACATAAG | 89122 |
rs59409421 | in-del | -/A | 0.5 | 0 | intron-variant, upstream-variant-2KB | TRIM4, LOC101927610 | GRCh38.p7 | 7:99918574 | GAAAAAAAAAAAAAA[-/A]TCTCATTGATAATTT | 89122 |
rs59996356 | snp | C/T | 0.0629771 | 0.165899 | intron-variant | TRIM4 | GRCh38.p7 | 7:99896882 | AAGCTGTGGCAGCTG[C/T]AGTTGGCCGGCCAGT | 89122 |
rs60305755 | snp | A/T | 0.0391387 | 0.134304 | utr-variant-3-prime | TRIM4 | GRCh38.p7 | 7:99890994 | CTTTTTGCATCTTAC[A/T]AACTTTCTACAATAA | 89122 |
rs61742750 | snp | G/T | 0.00972114 | 0.0690367 | missense | TRIM4 | GRCh38.p7 | 7:99903241 | CGCTTTAGCATTTCC[G/T]TCATCAATGGTATCT | 89122 |
rs66953435 | snp | G/T | 0.0240643 | 0.107019 | intron-variant | TRIM4 | GRCh38.p7 | 7:99909177 | GTGTGTGTGCATCCA[G/T]TCATCTGTTTCTTTC | 89122 |