Disease associated variation - GWASdb |
Chr | Pos | SNP ID(dbSNP 142) | Ref | Alt | Ori SNP ID | P-value | Drug Name | Drug Anno | GWAS Trait | HPO ID | DO ID | AA | Type | Trait or Drug |
4 | 186581859 | rs4241809 | C | T | rs4241809 | 1.10E-06 | TESTOSTERONE | LIN-28 PROTEIN, HUMAN|BIOLOGICAL MARKERS|RNA-BINDING PROTEINS | Digit length ratio | HPOID:0000818 | DOID:12849|DOID:1094|DOID:15|DOID:9970|DOID:9352|DOID:1287 | T | intron | GWASdb_drug |
4 | 186716984 | rs10021308 | G | A | rs10021308 | 1 | ETOPOSIDE | XANTHENES|ANTINEOPLASTIC AGENTS, PHYTOGENIC|RESAZURIN|OXAZINES | Drug response to Etoposide | NA | NA | A | intron | GWASdb_drug |
4 | 186522953 | rs6818789 | C | T | rs6818789 | 6.91E-04 | | | Alzheimer's disease | HPOID:0002511 | DOID:10652 | T | intron | GWASdb_trait |
4 | 186526185 | rs2101307 | T | C | rs2101307 | 1.00E-04 | | | Information processing speed | HPOID:0100753|HPOID:0000716 | DOID:1561 | G | intron | GWASdb_trait |
4 | 186529468 | rs12503636 | G | A | rs12503636 | 1.07E-05 | | | Cognitive test performance | HPOID:0100543 | DOID:1561 | G | intron | GWASdb_trait |
4 | 186529468 | rs12503636 | G | A | rs12503636 | 2.75E-04 | | | Lung function (forced expiratory volume in 1 second to forced vital capacity ratio) | HPOID:0002088 | DOID:850 | G | intron | GWASdb_trait |
4 | 186535247 | rs12502295 | A | G | rs12502295 | 6.59E-06 | | | Coronary heart disease | HPOID:0001677 | DOID:3393 | A | intron | GWASdb_trait |
4 | 186537232 | rs13144235 | C | T | rs13144235 | 2.42E-06 | | | Coronary heart disease | HPOID:0001677 | DOID:3393 | C | intron | GWASdb_trait |
4 | 186551624 | rs1471794 | T | G | rs1471794 | 8.36E-04 | | | Alzheimer's disease | HPOID:0002511 | DOID:10652 | T | intron | GWASdb_trait |
4 | 186559109 | rs2306707 | T | C | rs2306707 | 9.78E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | T | intron | GWASdb_trait |
4 | 186562877 | rs3749579 | G | A | rs3749579 | 9.63E-04 | | | Alzheimer's disease | HPOID:0002511 | DOID:10652 | T | intron | GWASdb_trait |
4 | 186570855 | rs7663827 | C | A | rs7663827 | 4.03E-05 | | | Odorant perception | HPOID:0000366 | DOID:0050155 | A | intron | GWASdb_trait |
4 | 186571441 | rs6821894 | C | T | rs6821894 | 9.20E-05 | | | Multiple sclerosis | HPOID:0000096|HPOID:0001967|HPOID:0009741|HPOID:0008664|HPOID:0001150|HPOID:0005450|HPOID:0005652|HPOID:0005686|HPOID:0005789|HPOID:0100923|HPOID:0100925|HPOID:0006623|HPOID:0100861|HPOID:0002694|HPOID:0004979|HPOID:0003881|HPOID:0003991|HPOID:0003854|HPOID:0003933|HPOID:0004030|HPOID:0100899|HPOID:0002634 | DOID:2377 | T | intron | GWASdb_trait |
4 | 186581859 | rs4241809 | C | T | rs4241809 | 1.10E-06 | | | Digit length ratio | HPOID:0000818 | DOID:12849|DOID:1094|DOID:15|DOID:9970|DOID:9352|DOID:1287 | T | intron | GWASdb_trait |
4 | 186610123 | rs13150700 | T | C | rs13150700 | 0.000277 | | | Schizophrenia | HPOID:0100753 | DOID:5419 | T | intron | GWASdb_trait |
4 | 186612675 | rs4376189 | G | A | rs4376189 | 2.00E-06 | | | Visceral adipose tissue/subcutaneous adipose tissue ratio | HPOID:0009124 | DOID:9970 | A | intron | GWASdb_trait |
4 | 186636805 | rs6825669 | C | T | rs6825669 | 5.60E-06 | | | Urinary metabolites | HPOID:0000079 | DOID:557 | C | intron | GWASdb_trait |
4 | 186636931 | rs6826210 | G | A | rs6826210 | 9.30E-06 | | | Urinary metabolites | HPOID:0000079 | DOID:557 | A | intron | GWASdb_trait |
4 | 186650131 | rs10014995 | C | A | rs10014995 | 1.31E-04 | | | Telomere length | HPOID:0000118 | NA | C | intron | GWASdb_trait |
4 | 186658094 | rs2276911 | C | T | rs2276911 | 3.22E-04 | | | Amyotrophic Lateral Sclerosis | HPOID:0007354 | DOID:332 | C | intron | GWASdb_trait |
4 | 186671479 | rs2173479 | T | C | rs2173479 | 2.63E-04 | | | IgE levels | HPOID:0010701 | DOID:6024 | G | intron | GWASdb_trait |
4 | 186672603 | rs11132344 | A | T | rs11132344 | 8.58E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | A | intron | GWASdb_trait |
4 | 186672603 | rs11132344 | A | T | rs11132344 | 1.20E-05 | | | Urinary metabolites | HPOID:0000079 | DOID:557 | A | intron | GWASdb_trait |
4 | 186692629 | rs7655720 | C | T | rs7655720 | 7.49E-04 | | | Myocardial Infarction | HPOID:0001658 | DOID:5844 | T | intron | GWASdb_trait |
4 | 186695208 | rs4487396 | C | T | rs4487396 | 2.76E-05 | | | Adverse response to chemotherapy (neutropenia/leucopenia) (epirubicin) | HPOID:0001875|HPOID:0001882 | DOID:1227 | C | intron | GWASdb_trait |
4 | 186716984 | rs10021308 | G | A | rs10021308 | 1 | | | Drug response to Etoposide | NA | NA | A | intron | GWASdb_trait |
4 | 186725449 | rs11132350 | G | T | rs11132350 | 3.09E-05 | | | Diabetes Mellitus | HPOID:0000819 | DOID:9351 | T | intron | GWASdb_trait |
4 | 186732566 | rs1566347 | T | C | rs1566347 | 9.15E-07 | | | Osteoarthritis | HPOID:0002758 | DOID:8398 | C | intron | GWASdb_trait |
4 | 186743257 | rs12504307 | C | G | rs12504307 | 4.35E-05 | | | Coronary heart disease | HPOID:0001677 | DOID:3393 | C | intron | GWASdb_trait |
4 | 186759155 | rs1499012 | G | A | rs1499012 | 9.12E-04 | | | Coronary heart disease | HPOID:0001677 | DOID:3393 | T | intron | GWASdb_trait |
4 | 186776769 | rs1027524 | A | C | rs1027524 | 9.32E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | G | intron | GWASdb_trait |
4 | 186790909 | rs11940126 | G | A | rs11940126 | 0.000057 | | | Otitis media (children 3 years old or younger) | HPOID:0000388 | DOID:10754 | G | intron | GWASdb_trait |
4 | 186808581 | rs13110782 | G | A | rs13110782 | 8.48E-04 | | | Suicide attempts in bipolar disorder | HPOID:0007302 | DOID:3312 | A | intron | GWASdb_trait |
4 | 186809714 | rs4862585 | C | T | rs4862585 | 5.90E-05 | | | Asthma | HPOID:0002099 | DOID:2841 | T | intron | GWASdb_trait |
4 | 186838212 | rs200740524 | C | CT | rs7672034 | 4.12E-05 | | | Bladder cancer | HPOID:0002862 | DOID:4007 | T | intron | GWASdb_trait |
4 | 186838212 | rs7672034 | C | T | rs7672034 | 4.12E-05 | | | Bladder cancer | HPOID:0002862 | DOID:4007 | T | intron | GWASdb_trait |
4 | 186853014 | rs4862600 | C | T | rs4862600 | 1.00E-05 | | | Urinary metabolites | HPOID:0000079 | DOID:557 | C | intron | GWASdb_trait |