SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs740561 | snp | C/T | 0.299664 | 0.245017 | intron-variant | NACC1 | GRCh38.p7 | 19:13128326 | TCTAGACTGCCAGCC[C/T]CCAGCACTCTGAAAT | 112939 |
rs1006397 | snp | A/G | 0.235564 | 0.249583 | intron-variant | NACC1 | GRCh38.p7 | 19:13121584 | TCTCTCCAAACCCCC[A/G]GGCCTCCAGGCAGAC | 112939 |
rs2024133 | snp | A/G | 0.498481 | 0.027514 | intron-variant | NACC1 | GRCh38.p7 | 19:13124073 | AGTCATTCAGGGAAA[A/G]AGATAACGAATTAAA | 112939 |
rs2159214 | snp | A/G | 0.491577 | 0.0643472 | intron-variant | NACC1 | GRCh38.p7 | 19:13121181 | GATCTGAATAATAAT[A/G]TTAGCTAAGGGGTGG | 112939 |
rs2286436 | snp | A/T | 0.243633 | 0.249919 | upstream-variant-2KB, utr-variant-5-prime, nc-transcript-variant | TRMT1, NACC1 | GRCh38.p7 | 19:13116812 | CGGGATCAAAATGAA[A/T]GCCATAAAGGAAGCG | 112939 |
rs2302159 | snp | A/G | 0.176861 | 0.239062 | intron-variant, utr-variant-5-prime, upstream-variant-2KB | TRMT1, NACC1 | GRCh38.p7 | 19:13116540 | AAAACCTGCGGCCTC[A/G]GTAAGCTGATATCCC | 112939 |
rs2304096 | snp | A/C | 0.16846 | 0.236329 | downstream-variant-500B | NACC1 | GRCh38.p7 | 19:13141168 | CCTCCCTGGGCCCCC[A/C]AGTAACGAGCATGCG | 112939 |
rs2418873 | snp | C/T | | | intron-variant | NACC1 | GRCh38.p7 | 19:13127524 | ggtgaaaccccatct[C/T]tactaaaaatagaaa | 112939 |
rs4302161 | snp | A/G | 0.402806 | 0.197864 | upstream-variant-2KB, intron-variant | TRMT1, NACC1 | GRCh38.p7 | 19:13117881 | tatagtgtgtctgta[A/G]cagttctcactaaaa | 112939 |
rs4926117 | snp | A/G | 0.236434 | 0.249632 | intron-variant | NACC1 | GRCh38.p7 | 19:13130130 | GACCCAGGCTGAAAT[A/G]TAGTGGCACAATCAT | 112939 |
rs4926197 | snp | C/T | 0.29432 | 0.24604 | intron-variant | NACC1 | GRCh38.p7 | 19:13121065 | GATAATTTCACATAC[C/T]TCTGTGTTTACAAAG | 112939 |
rs4926198 | snp | C/T | 0.294832 | 0.245947 | intron-variant | NACC1 | GRCh38.p7 | 19:13121104 | GCAAAGTGAAGTCAT[C/T]ATGAGCCATGAGGGG | 112939 |
rs4926209 | snp | G/T | 0.235273 | 0.249566 | intron-variant | NACC1 | GRCh38.p7 | 19:13130816 | gctgggattacaggc[G/T]tgagccaccgcgcct | 112939 |
rs4926210 | snp | A/G | 0.490673 | 0.0676508 | intron-variant | NACC1 | GRCh38.p7 | 19:13131211 | CACAAAGGAGGATGC[A/G]GTTCATCAGGATGGG | 112939 |
rs7245475 | snp | C/T | 0 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13123625 | CCTGAGGTGGAGGTC[C/T]TCAGACAGGCAGAAG | 112939 |
rs7247596 | snp | A/G | | | intron-variant | NACC1 | GRCh38.p7 | 19:13121156 | GCCGGAAGTGTTCCC[A/G]GAGAGCTAAGATCTG | 112939 |
rs7249150 | snp | A/C | 0.0715223 | 0.175059 | intron-variant | NACC1 | GRCh38.p7 | 19:13121339 | TGGGGGGATGACCCT[A/C]CTGTGGAGACAGAGA | 112939 |
rs7256436 | snp | A/G | 0.0741063 | 0.177655 | intron-variant | NACC1 | GRCh38.p7 | 19:13123308 | AAGGGTGGGCTTATG[A/G]TTGGAGTTGGTGGGG | 112939 |
rs7259253 | snp | A/G | 0.459914 | 0.13578 | intron-variant | NACC1 | GRCh38.p7 | 19:13126688 | CTACCCACCTTGGCA[A/G]CTGTCAAAGGAGGTC | 112939 |
rs8103456 | snp | C/G | | | intron-variant | NACC1 | GRCh38.p7 | 19:13127853 | ccctgtctccaaaag[C/G]aaaaGAGTAGAGAAA | 112939 |
rs8105087 | snp | A/T | 0.440471 | 0.161928 | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13139526 | TATGTGTGGAGTGTG[A/T]GTGTGTGTTTCCATG | 112939 |
rs8107842 | snp | G/T | 0.233818 | 0.249476 | intron-variant | NACC1 | GRCh38.p7 | 19:13126256 | caccatgttagccag[G/T]atggtctctatctcc | 112939 |
rs8109318 | snp | A/G | 0.233818 | 0.249476 | intron-variant | NACC1 | GRCh38.p7 | 19:13122780 | TCCCATGAAATGTGC[A/G]AGGTCTGGGAGATGG | 112939 |
rs8111717 | snp | G/T | 0.460925 | 0.134204 | upstream-variant-2KB, intron-variant | TRMT1, NACC1 | GRCh38.p7 | 19:13118687 | TGGACCGCTCCCCCG[G/T]CTCCCAGCGAGGGAG | 112939 |
rs8112067 | snp | A/G | 0.421897 | 0.181525 | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13138430 | GCCTCCCGCGGGGCC[A/G]CACACTTCCCCTCCC | 112939 |
rs10401864 | snp | C/G/T | | | intron-variant | NACC1 | GRCh38.p7 | 19:13123921 | gaaatggCAGGCAGG[C/G/T]TCATTTCTTCCTCAG | 112939 |
rs10401962 | snp | C/T | 0.0726307 | 0.176182 | utr-variant-5-prime, upstream-variant-2KB, nc-transcript-variant | TRMT1, NACC1 | GRCh38.p7 | 19:13116717 | GAATTAGGACCTGGG[C/T]GCCGCCATGTTGGCA | 112939 |
rs10405911 | snp | A/G | | | intron-variant | NACC1 | GRCh38.p7 | 19:13127594 | tactcaggaggctga[A/G]acaggagaatcgctt | 112939 |
rs10406576 | snp | A/G | 0.00386846 | 0.0438094 | intron-variant | NACC1 | GRCh38.p7 | 19:13127898 | CAGGGAGAGTATGAA[A/G]AGCTATGGCTGTCCC | 112939 |
rs10408126 | snp | C/T | 0.0134861 | 0.0810011 | intron-variant | NACC1 | GRCh38.p7 | 19:13135154 | TTTGCCGCCTGACCC[C/T]GTCCCTCCGTCTCTG | 112939 |
rs10408277 | snp | C/T | 0.0547245 | 0.156101 | intron-variant | NACC1 | GRCh38.p7 | 19:13124454 | gctgtattgcccagg[C/T]tggtctcaaactcct | 112939 |
rs10420429 | snp | C/T | 0 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13122862 | GGCCAGGGGATACGA[C/T]TAACAGCAGCTGGCA | 112939 |
rs10420597 | snp | C/T | 0.0718919 | 0.175435 | intron-variant | NACC1 | GRCh38.p7 | 19:13122900 | GCACCGACTACGGGG[C/T]GAGCGCCGATCGGCC | 112939 |
rs11667585 | snp | G/T | 0 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13127556 | attagccaggcatgg[G/T]ggtggttacctttaa | 112939 |
rs11670420 | snp | A/G | | | intron-variant | NACC1 | GRCh38.p7 | 19:13127601 | gaggctgagacagga[A/G]aatcgcttgaacgat | 112939 |
rs11670425 | snp | A/G | | | intron-variant | NACC1 | GRCh38.p7 | 19:13127633 | cttgcagtgagccga[A/G]atcccaccactgcac | 112939 |
rs12981904 | snp | C/T | 0.452719 | 0.146304 | intron-variant | NACC1 | GRCh38.p7 | 19:13138042 | CGTGGCCTCACTCGT[C/T]TCCCCTTTGAGAGGG | 112939 |
rs12982296 | snp | C/T | 0.0130921 | 0.0798413 | intron-variant | NACC1 | GRCh38.p7 | 19:13131526 | ATGGTGCCTGTTTCT[C/T]CTGCCTCTTCATGCA | 112939 |
rs16995252 | snp | A/G | 0.0807149 | 0.183963 | intron-variant | NACC1 | GRCh38.p7 | 19:13132490 | TCTTTTGAATTTTGA[A/G]CCTGGTGAATGAATT | 112939 |
rs28587443 | snp | C/G | 0.0715223 | 0.175059 | intron-variant | NACC1 | GRCh38.p7 | 19:13129702 | GCTCCAAAGCCCTGG[C/G]TGCTGTGGTGCTGGG | 112939 |
rs28609273 | snp | A/G | 0.0718919 | 0.175435 | intron-variant | NACC1 | GRCh38.p7 | 19:13129327 | TAGGGACCTGCCAGC[A/G]AGAGACCCGTTTCCT | 112939 |
rs28707682 | snp | A/G | 0.422473 | 0.180978 | intron-variant, upstream-variant-2KB | TRMT1, NACC1 | GRCh38.p7 | 19:13114915 | TTTGCCAACTCTTGC[A/G]AAGGTCACCAATTTT | 112939 |
rs34010451 | in-del | -/T | 0.5 | 0 | upstream-variant-2KB, intron-variant, utr-variant-5-prime, nc-transcript-variant | TRMT1, NACC1 | GRCh38.p7 | 19:13117563 | TTCTTTCTTTCTTTC[-/T]TTTTTTTTTTTTTTT | 112939 |
rs34011927 | in-del | -/A | | | intron-variant | NACC1 | GRCh38.p7 | 19:13121734 | AGCCACCGGGGCTGG[-/A]AAACATGAGTCAGTG | 112939 |
rs34106415 | in-del | -/A | 0 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13129923 | TTAAAAAAAAAAAAA[-/A]TTACCTGTGGCCGGT | 112939 |
rs34143175 | snp | G/T | 0.125528 | 0.21681 | intron-variant | NACC1 | GRCh38.p7 | 19:13123224 | TTCCCTCCACCCTTG[G/T]TTGCCGCCACTGCTG | 112939 |
rs34458578 | snp | G/T | 0 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13137994 | ACTCAGTCCGGTGTA[G/T]GGTTGGGTGCACGTA | 112939 |
rs34473889 | in-del | -/G | | | intron-variant | NACC1 | GRCh38.p7 | 19:13137774 | GCCGAAGGGAAGCCA[-/G]GGGAGCCTGTGTCAG | 112939 |
rs34481537 | in-del | -/T | | | intron-variant | NACC1 | GRCh38.p7 | 19:13132550 | TCCACATGACCTCAG[-/T]TTTTCCAGCTTTGCA | 112939 |
rs34580644 | in-del | -/A | | | intron-variant | NACC1 | GRCh38.p7 | 19:13119963 | AGTGGCTGAACTGGG[-/A]ATTGTCTGACCCTCA | 112939 |
rs34588092 | in-del | -/A | 0.309401 | 0.24284 | intron-variant | NACC1 | GRCh38.p7 | 19:13129916 | TGAGACCCTGTCTTT[-/A]AAAAAAAAAAAAATT | 112939 |
rs34652828 | in-del | -/A | 0 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13132430 | GCAAGACTCTGTCTT[-/A]AAAAAAAAAAAAAAA | 112939 |
rs34994045 | in-del | -/G | | | intron-variant | NACC1 | GRCh38.p7 | 19:13131993 | GCCTCCCGAGTAGCT[-/G]GGGATTACAGGCACC | 112939 |
rs35415128 | in-del | -/C | | | intron-variant | NACC1 | GRCh38.p7 | 19:13124537 | GAGTCACCGCCCCCC[-/C]ACTGAACAGTTTGTT | 112939 |
rs35471906 | in-del | -/G | | | intron-variant | NACC1 | GRCh38.p7 | 19:13125624 | GGGTTTCACTGTGTT[-/G]GCCCAGGCTGATCTC | 112939 |
rs35550541 | in-del | -/G | 0.13446 | 0.221699 | intron-variant | NACC1 | GRCh38.p7 | 19:13122577 | ATAGGCCAGGGATGC[-/G]GTTCAACATCAGACA | 112939 |
rs35645487 | in-del | -/C | | | upstream-variant-2KB, intron-variant, splice-donor-variant | TRMT1, NACC1 | GRCh38.p7 | 19:13117487 | AAATCCTGGCACCTA[-/C]CCATCACTTCCTTGC | 112939 |
rs36083263 | snp | A/G | 0.234401 | 0.249513 | intron-variant | NACC1 | GRCh38.p7 | 19:13122685 | TATCATGAGGTTTGC[A/G]GGAGAGGTTGGCGTC | 112939 |
rs45536538 | snp | C/G | | | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13138996 | GCACAACCGACCTCA[C/G]GTGGCCGGCAGTGGC | 112939 |
rs45554531 | snp | C/T | 0.0149953 | 0.0852807 | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13138409 | AGCCCTGCAGTAACC[C/T]GCCCAGCCTCCCGCG | 112939 |
rs55793294 | snp | C/T | | | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13139867 | CTATGCAGGGTGTCA[C/T]TTCACCATCCACATC | 112939 |
rs55820473 | snp | C/T | | | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13140195 | AACCTTAGCCCCCAG[C/T]CGGCCTGAGTGGGGG | 112939 |
rs57065176 | in-del | -/CT | | | intron-variant | NACC1 | GRCh38.p7 | 19:13130530 | ATACACCTCTTTTTT[-/CT]TTTCTTTTTTTTTTT | 112939 |
rs57439363 | snp | A/G | 0.0178098 | 0.0926698 | intron-variant | NACC1 | GRCh38.p7 | 19:13125403 | CTGAATCAACTCCCG[A/G]AGGCCCCACTTTTTT | 112939 |
rs58127603 | snp | C/G | 0.179744 | 0.239925 | upstream-variant-2KB, intron-variant | TRMT1, NACC1 | GRCh38.p7 | 19:13117223 | TCGGTAAAGTTCTAA[C/G]CAGTGTATGAAGGCA | 112939 |
rs58467598 | snp | A/G | 0.00279162 | 0.0372561 | intron-variant | NACC1 | GRCh38.p7 | 19:13138066 | GAGAGGGAGTCGCAG[A/G]TGCTGTAGGGGAGCT | 112939 |
rs58813819 | in-del | -/CACACACA | | | downstream-variant-500B | NACC1 | GRCh38.p7 | 19:13141327 | ACACACACACACACA[-/CACACACA]ATTTTTTTTTCTTTT | 112939 |
rs59064237 | snp | C/T | 0.171704 | 0.237423 | intron-variant | NACC1 | GRCh38.p7 | 19:13122183 | CCTCCAGCCTTCTCA[C/T]GTGCTGCCTCCTTGG | 112939 |
rs59958429 | in-del | -/A | | | intron-variant | NACC1 | GRCh38.p7 | 19:13127353 | AAAAAAAAAAAAAAA[-/A]GCATACATATACATA | 112939 |
rs60051691 | snp | C/G | 0.00993419 | 0.0697739 | intron-variant | NACC1 | GRCh38.p7 | 19:13121585 | TCTGCCTGGAGGCCC[C/G]GGGGTTTGGAGAGAG | 112939 |
rs61678219 | snp | C/T | 0.046775 | 0.145601 | intron-variant | NACC1 | GRCh38.p7 | 19:13130923 | AGGACCCCACCTGTC[C/T]CATACCCTTCCTGGC | 112939 |
rs62109911 | snp | A/G | 0.245631 | 0.249962 | intron-variant | NACC1 | GRCh38.p7 | 19:13123331 | TGGTGGGGAGGGAGC[A/G]GGCAGGCTGCGAGCT | 112939 |
rs62109912 | snp | A/G | 0.5 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13126331 | GCTGGGGTTACAGGC[A/G]TGAGTCACCGTGCCC | 112939 |
rs62109925 | snp | A/G | 0.170408 | 0.236992 | intron-variant | NACC1 | GRCh38.p7 | 19:13129843 | CCTCCTATTATCCCC[A/G]TAACCTTTCAGTCTC | 112939 |
rs62109926 | snp | A/G | 0.00358779 | 0.0422022 | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13139464 | CTTGGAAGGCAGGGC[A/G]GTGTTGGGGGGCTGG | 112939 |
rs71168654 | in-del | -/A/T | | | upstream-variant-2KB, intron-variant | TRMT1, NACC1 | GRCh38.p7 | 19:13117579 | TTTTTTTTTTTTTTT[-/A/T]GAGACGGAGTCTCGC | 112939 |
rs71168659 | in-del | -/T | 0.25912 | 0.249834 | intron-variant | NACC1 | GRCh38.p7 | 19:13127694 | GCTAATTTTTTTTTT[-/T]CTTTTTTTTTTTGAG | 112939 |
rs71168661 | in-del | -/C | 0.499759 | 0.0109798 | intron-variant | NACC1 | GRCh38.p7 | 19:13132167 | TGGCCTCCCAAAGTG[-/C]TAGGATTACAGGCAT | 112939 |
rs71168663 | in-del | -/A | | | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13139823 | GGGGAGTTAAAAAAG[-/A]AAAAAAAACTGCCTT | 112939 |
rs71168664 | in-del | -/CTG | 0 | 0 | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13140393 | GAAGTGGGGGAGCAC[-/CTG]CTTCCTTTCAGGGGT | 112939 |
rs73006862 | snp | C/T | 0.0513262 | 0.151752 | intron-variant | NACC1 | GRCh38.p7 | 19:13128000 | CCCAGGCAGTGTCAC[C/T]TGGGGCCAAGGTAGT | 112939 |
rs73507391 | snp | C/G | 0.000606694 | 0.0174063 | intron-variant, upstream-variant-2KB | TRMT1, NACC1 | GRCh38.p7 | 19:13115846 | AATCTCCAAAATATC[C/G]TCCCTGAAATCCCTG | 112939 |
rs73507394 | snp | C/G | 0.00279162 | 0.0372561 | intron-variant | NACC1 | GRCh38.p7 | 19:13121715 | TGCTTTTGGGATGGT[C/G]GTGAGCCACCGGGGC | 112939 |
rs73507400 | snp | C/T | 0.0818113 | 0.184966 | intron-variant | NACC1 | GRCh38.p7 | 19:13128431 | CCGTTATGACCTCAA[C/T]TAACCTTAATTAGCT | 112939 |
rs73509404 | snp | C/T | 0.030278 | 0.119257 | intron-variant | NACC1 | GRCh38.p7 | 19:13128912 | AAGGTCCCAGCTGCC[C/T]TGTGGCCTCCTGCCC | 112939 |
rs73509405 | snp | G/T | 0.0818113 | 0.184966 | intron-variant | NACC1 | GRCh38.p7 | 19:13128992 | ATGATTCTCATATGG[G/T]TTTCTGCCCTTGGGG | 112939 |
rs74180202 | snp | A/G | 0.232359 | 0.249377 | utr-variant-3-prime | NACC1 | GRCh38.p7 | 19:13140346 | GCGGCTGGGCCTGAC[A/G]GAGGCCGAGGGGCAG | 112939 |
rs74181691 | snp | A/G | 0.000798403 | 0.0199641 | intron-variant | NACC1 | GRCh38.p7 | 19:13123808 | ATTTTTGCCTGATTC[A/G]GGAGCCAGACGGCCT | 112939 |
rs74363183 | snp | C/T | 0.0158469 | 0.0875917 | intron-variant | NACC1 | GRCh38.p7 | 19:13121725 | ATGGTGGTGAGCCAC[C/T]GGGGCTGGAAAACAT | 112939 |
rs74401596 | snp | C/T | 0.00057019 | 0.0168751 | intron-variant, upstream-variant-2KB | TRMT1, NACC1 | GRCh38.p7 | 19:13115238 | GAATTTGACCCCAGG[C/T]AGGCTTGTCCCAGAG | 112939 |
rs74437885 | snp | A/C | 0.13259 | 0.220715 | intron-variant, upstream-variant-2KB | TRMT1, NACC1 | GRCh38.p7 | 19:13116086 | CTAGCTCATACCCCG[A/C]CCCCGCCATCCACAC | 112939 |
rs74569397 | snp | C/T | 0.0818113 | 0.184966 | intron-variant | NACC1 | GRCh38.p7 | 19:13128484 | ACAGGCACATTGGGG[C/T]TCAGAGTTTCAATCT | 112939 |
rs74636776 | snp | G/T | 0.5 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13136854 | CAGAGTGAGACTTCA[G/T]CTCTTAAAAAAAGAA | 112939 |
rs75383940 | snp | G/T | 0.0166325 | 0.0896639 | intron-variant | NACC1 | GRCh38.p7 | 19:13119624 | CCAACTCCTTGAGCC[G/T]GAGTTCTGTGTGCCA | 112939 |
rs75445606 | snp | A/G | 0.046775 | 0.145601 | intron-variant | NACC1 | GRCh38.p7 | 19:13133845 | ACCGTTTGAGGAACC[A/G]TCAGACTGTTCTCCA | 112939 |
rs75551089 | snp | A/G | 0.000399281 | 0.0141238 | intron-variant, upstream-variant-2KB | TRMT1, NACC1 | GRCh38.p7 | 19:13114988 | TGCCTGACACATAGC[A/G]GACACTGGATATACT | 112939 |
rs75577014 | snp | C/G | 0.5 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13125077 | GAGGTGAGAGGATAA[C/G]TTGAGCCCAGGAGTT | 112939 |
rs75657525 | snp | A/G | 0.0376037 | 0.131863 | intron-variant | NACC1 | GRCh38.p7 | 19:13119647 | GTGTGCCATCTCCCT[A/G]GGGGTGAAGAATTAG | 112939 |
rs76109669 | snp | G/T | 0.5 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13127461 | CAGCACTTTGGGAGG[G/T]GGGCGGATCACTTGA | 112939 |
rs76343576 | snp | C/G | 0.5 | 0 | intron-variant | NACC1 | GRCh38.p7 | 19:13122420 | CTCCTCTGATAAGGA[C/G]TGACAAGTGGGCACA | 112939 |