DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome SNRNP25 3'UTR f511c38b72 BA101929 NM_024571 chr16:47144-47662:+ SNRNP25 3'UTR 537d44f48c BA101930 NM_024571 chr16:46361-47660:+ SNRNP25 3'UTR 29c31b1cb1 BA101931 NM_024571 chr16:47144-47453:+ SNRNP25 3'UTR df93505366 BA101932 NM_024571 chr16:47278-47453:+ SNRNP25 3'UTR 39e16342e2 BA101933 NM_024571 chr16:47278-47660:+ SNRNP25 5'UTR f511c38b72 CA160639 NM_024571 chr16:43829-43989:+ SNRNP25 5'UTR 537d44f48c CA160640 NM_024571 chr16:43010-43989:+ SNRNP25 5'UTR 29c31b1cb1 CA160641 NM_024571 chr16:43010-43989:+ SNRNP25 5'UTR df93505366 CA160642 NM_024571 chr16:46095-46457:+ SNRNP25 5'UTR 39e16342e2 CA160643 NM_024571 chr16:46095-46457:+

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT713308 hsa-miR-6882-3p Homo sapiens SNRNP25 79622 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157 MIRT713309 hsa-miR-4252 Homo sapiens SNRNP25 79622 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157 MIRT713310 hsa-miR-3670 Homo sapiens SNRNP25 79622 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157 MIRT713311 hsa-miR-4677-3p Homo sapiens SNRNP25 79622 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157 MIRT713312 hsa-miR-665 Homo sapiens SNRNP25 79622 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004487 hsa-let-7f-2* 79622 SNRNP25 ccuuucugucaucUGACAUAUc |||||||| cacggccuggcccACUGUAUAa 2 10 259 280 [hg19:16:107402-107423:+] 0.5099 145 7 -10.63 -0.7083 MIMAT0004487 hsa-let-7f-2* 79622 SNRNP25 ccuuucugucaucUGACAUAUc |||||||| cacggccuggcccACUGUAUAa 2 10 509 530 [hg19:16:107402-107423:+] 0.5099 145 7 -10.63 -0.6523 MIMAT0004509 hsa-miR-93* 79622 SNRNP25 gcccUUCACGAUCGAG-UCGUCa | |||| ||||| ||||| agauACGUGC-AGCUCAAGCAGg 2 19 65 86 [hg19:16:105830-105851:+] 0.6564 132 0 -21.53 -0.3137 MIMAT0009196 hsa-miR-103-2* 79622 SNRNP25 guuCCGUCGUGACAUUUCUUCGa || || || | |||||||| cacGGAAG-ACAG-AAAGAAGCu 2 21 166 186 [hg19:16:106587-106607:+] 0.7506 156 7 -15.99 -0.7256 MIMAT0000251 hsa-miR-147 79622 SNRNP25 cgucuucguaaaGGUGUGUg ||||||| ccacuccccaaaCCACACAa 2 9 445 464 [hg19:16:107588-107607:+] 0.5286 140 7 -12.57 -0.9159 MIMAT0000251 hsa-miR-147 79622 SNRNP25 cgucuucguaaaGGUGUGUg ||||||| ccacuccccaaaCCACACAa 2 9 695 714 [hg19:16:107588-107607:+] 0.5286 140 7 -12.57 -0.8650 MIMAT0004671 hsa-miR-194* 79622 SNRNP25 gucuauUGUC-GUCGGGGUGACc ||:| | | ||||||| agacccACGGCCUGGCCCACUGu 2 17 254 276 [hg19:16:107397-107419:+] 0.5099 151 7 -21.79 -0.3818 MIMAT0004671 hsa-miR-194* 79622 SNRNP25 gucuauUGUC-GUCGGGGUGACc ||:| | | ||||||| agacccACGGCCUGGCCCACUGu 2 17 504 526 [hg19:16:107397-107419:+] 0.5099 151 7 -21.79 -0.3384 MIMAT0000690 hsa-miR-296-5p 79622 SNRNP25 ugUCCUAACU-CCCCCCCGGGa || || | |||||||| ucAGCAUAAACCUGGGGGCCCu 2 20 138 159 [hg19:16:107281-107302:+] 0.5022 146 7 -24.15 -0.2134 MIMAT0000690 hsa-miR-296-5p 79622 SNRNP25 ugUCCUAACU-CCCCCCCGGGa || || | |||||||| ucAGCAUAAACCUGGGGGCCCu 2 20 388 409 [hg19:16:107281-107302:+] 0.5022 146 7 -24.15 -0.1828 MIMAT0004690 hsa-miR-379* 79622 SNRNP25 ucaaucaccUGGUACAAU-GUAu ||::||||| ||| aaccacacaACUGUGUUACCAUg 2 14 455 477 [hg19:16:107598-107620:+] 0.5286 121 0 -10.84 -0.4587 MIMAT0004690 hsa-miR-379* 79622 SNRNP25 ucaaucaccUGGUACAAU-GUAu ||::||||| ||| aaccacacaACUGUGUUACCAUg 2 14 705 727 [hg19:16:107598-107620:+] 0.5286 121 0 -10.84 -0.4102 MIMAT0004757 hsa-miR-431* 79622 SNRNP25 ucuuCGGGACGUUCUG-CUGGAc | |||| |||| ||||| acuuGGCCUG--AGACUGACCUc 2 19 202 222 [hg19:16:107345-107365:+] 0.4782 123 0 -19.26 -0.1493 MIMAT0004757 hsa-miR-431* 79622 SNRNP25 ucuuCGGGACGUUCUG-CUGGAc | |||| |||| ||||| acuuGGCCUG--AGACUGACCUc 2 19 452 472 [hg19:16:107345-107365:+] 0.4782 123 0 -19.26 -0.1281 MIMAT0002815 hsa-miR-432* 79622 SNRNP25 ucUGUACCUCCU-CGGUAGGUc || || || | |||||||| ggACCUGAAGAAGGCCAUCCAg 2 20 43 64 [hg19:16:105808-105829:+] 0.6564 162 7 -24.62 -0.2637 MIMAT0002822 hsa-miR-512-5p 79622 SNRNP25 cuUUCACGGGAG------UUCCGACUCac |:|| :|||: || |||||| cgAGGUUUCCUUCAUCAAAAAGCUGAGgc 3 22 214 242 [hg19:16:107107-107135:+] 0.7713 128 0 -19.30 -0.1315 MIMAT0002847 hsa-miR-518c* 79622 SNRNP25 guCUUUCACGAAGGGAG-GUCUCu ||:| ||| || || ||||| cuGAGAUUGC-CCCAUCACAGAGg 2 22 343 365 [hg19:16:107486-107508:+] 0.5224 127 0 -20.87 -0.5196 MIMAT0002847 hsa-miR-518c* 79622 SNRNP25 gucuuucacgaaGGGAGGUCUCu || ||||||| accugaagaaggCCAUCCAGAGa 2 12 45 67 [hg19:16:105810-105832:+] 0.6564 147 7 -21.39 -0.6874 MIMAT0002847 hsa-miR-518c* 79622 SNRNP25 guCUUUCACGAAGGGAG-GUCUCu ||:| ||| || || ||||| cuGAGAUUGC-CCCAUCACAGAGg 2 22 593 615 [hg19:16:107486-107508:+] 0.5224 127 0 -20.87 -0.4679 MIMAT0002859 hsa-miR-516b 79622 SNRNP25 uuucacgaagaaUGGAGGUCUa :|||||||| aggcaaaagugaGCCUCCAGAc 2 11 239 260 [hg19:16:107132-107153:+] 0.5571 146 7 -20.81 -0.1106 MIMAT0002873 hsa-miR-502-5p 79622 SNRNP25 aucgUGGGUCUAUCGUUCCUa |:|: | |||||||| caugAUCUCCACAGCAAGGAg 2 18 474 494 [hg19:16:107617-107637:+] 0.5286 153 7 -15.79 -0.3055 MIMAT0002873 hsa-miR-502-5p 79622 SNRNP25 aucgUGGGUCUAUCGUUCCUa |:|: | |||||||| caugAUCUCCACAGCAAGGAg 2 18 724 744 [hg19:16:107617-107637:+] 0.5286 153 7 -15.79 -0.2684 MIMAT0003216 hsa-miR-553 79622 SNRNP25 uuuUGUUUUAGAGUGG-CAAAa |:||||| ||| |||| uguAUAAAAU-AAACCUGUUUg 2 19 274 294 [hg19:16:107417-107437:+] 0.5273 120 0 -10.55 -0.9374 MIMAT0003216 hsa-miR-553 79622 SNRNP25 uuuUGUUUUAGAGUGG-CAAAa |:||||| ||| |||| uguAUAAAAU-AAACCUGUUUg 2 19 524 544 [hg19:16:107417-107437:+] 0.5273 120 0 -10.55 -0.8877 MIMAT0003217 hsa-miR-554 79622 SNRNP25 ugaccgacucAGUCCUGAUCg |||||||||| cugggggcccUCAGGACUAGg 2 12 149 169 [hg19:16:107292-107312:+] 0.4830 155 7 -24.58 -0.1437 MIMAT0003217 hsa-miR-554 79622 SNRNP25 ugaccgacucAGUCCUGAUCg |||||||||| cugggggcccUCAGGACUAGg 2 12 399 419 [hg19:16:107292-107312:+] 0.4830 155 7 -24.58 -0.1222 MIMAT0003222 hsa-miR-558 79622 SNRNP25 uaaaaCCAUGU-CGUCGAGu | |||: ||||||| ccagaGAUACGUGCAGCUCa 2 15 61 80 [hg19:16:105826-105845:+] 0.6564 149 7 -17.53 -0.8015 MIMAT0003248 hsa-miR-583 79622 SNRNP25 cauuacccuGGAAGGAGAAAc | | ||||||| ucgaaucauCGUGCCUCUUUc 2 13 66 86 [hg19:16:107209-107229:+] 0.4359 144 7 -11.54 -0.1228 MIMAT0003248 hsa-miR-583 79622 SNRNP25 cauuacccuGGAAGGAGAAAc | | ||||||| ucgaaucauCGUGCCUCUUUc 2 13 316 336 [hg19:16:107209-107229:+] 0.4359 144 7 -11.54 -0.1038 MIMAT0003279 hsa-miR-611 79622 SNRNP25 cagucuggggcUCCCCAGGAGCg | ||||||||| ucccagcaggaAUGGGUCCUCGa 2 13 47 69 [hg19:16:107190-107212:+] 0.4643 152 7 -26.64 -0.3224 MIMAT0003279 hsa-miR-611 79622 SNRNP25 cagucuggggcUCCCCAGGAGCg | ||||||||| ucccagcaggaAUGGGUCCUCGa 2 13 297 319 [hg19:16:107190-107212:+] 0.4643 152 7 -26.64 -0.2812 MIMAT0003279 hsa-miR-611 79622 SNRNP25 caGUC-UGGGGCUCCCCAGGA-GCg ||| || :| : |||||| || uuCAGCACAUCAGCUGGUCCUACGu 2 22 102 126 [hg19:16:105867-105882,106539-106547:+] 0.7035 120 0 -22.21 -0.2042 MIMAT0003282 hsa-miR-614 79622 SNRNP25 gguGGACCGU-UCUUGUCC-GCAAg :|| || |||| ||| |||| gccUCUUUCACAGAA-AGGACGUUg 2 21 78 101 [hg19:16:107221-107244:+] 0.4021 121 0 -15.76 -0.1010 MIMAT0003289 hsa-miR-620 79622 SNRNP25 uaAAGAUAUAGAUAGAGGUa | :|| : ||||||| ugUGUUACCAUGAUCUCCAc 2 19 466 485 [hg19:16:107609-107628:+] 0.5286 142 7 -9.95 -0.2850 MIMAT0003289 hsa-miR-620 79622 SNRNP25 uaAAGAUAUAGAUAGAGGUa | :|| : ||||||| ugUGUUACCAUGAUCUCCAc 2 19 716 735 [hg19:16:107609-107628:+] 0.5286 142 7 -9.95 -0.2498 MIMAT0004809 hsa-miR-628-5p 79622 SNRNP25 ggagaUCAUUUAUACAGUCGUa ||||| |||||||| ccaacAGUAA--CUGUCAGCAu 2 18 125 144 [hg19:16:107268-107287:+] 0.4353 154 7 -17.35 -0.2647 MIMAT0004809 hsa-miR-628-5p 79622 SNRNP25 ggagaUCAUUUAUACAGUCGUa ||||| |||||||| ccaacAGUAA--CUGUCAGCAu 2 18 375 394 [hg19:16:107268-107287:+] 0.4353 154 7 -17.35 -0.2278 MIMAT0003314 hsa-miR-644 79622 SNRNP25 cgAGAUUCU--UUCGGUGUGa || |||| : ||||||| agUCCAAGAUGGCGCCACACc 2 18 404 424 [hg19:16:107547-107567:+] 0.5224 152 7 -15.89 -0.1647 MIMAT0003314 hsa-miR-644 79622 SNRNP25 cgagauucUUUCGGUGUGa :|:||||||| aaagccuuGAGGCCACACc 2 12 428 446 [hg19:16:107571-107589:+] 0.5255 147 7 -17.82 -0.1747 MIMAT0003314 hsa-miR-644 79622 SNRNP25 cgAGAUUCU--UUCGGUGUGa || |||| : ||||||| agUCCAAGAUGGCGCCACACc 2 18 654 674 [hg19:16:107547-107567:+] 0.5224 152 7 -15.89 -0.1424 MIMAT0003314 hsa-miR-644 79622 SNRNP25 cgagauucUUUCGGUGUGa :|:||||||| aaagccuuGAGGCCACACc 2 12 678 696 [hg19:16:107571-107589:+] 0.5255 147 7 -17.82 -0.1512 MIMAT0003319 hsa-miR-649 79622 SNRNP25 cugAGAACUU-GUUGUG-UCCAAa || ||| |:| || ||||| gcaUCCGGAAUCGAGACGAGGUUu 2 20 198 221 [hg19:16:107091-107114:+] 0.7713 122 0 -15.86 -0.7187 MIMAT0003324 hsa-miR-661 79622 SNRNP25 ugCGCGUCCGGUCUCUGGGUCCGu |:| |||| | ||||||| uuGUGGUGGCCUCA-CCCCAGGCa 2 23 99 121 [hg19:16:107242-107264:+] 0.3684 152 7 -29.46 -0.1188 MIMAT0003324 hsa-miR-661 79622 SNRNP25 ugcGCGUCCGGUCUCUGGGU-CCGu | || | | ||||||| ||| aguCACAUGGC--AGACCCACGGCc 2 22 243 265 [hg19:16:107386-107408:+] 0.5099 122 0 -22.39 -0.1823 MIMAT0003324 hsa-miR-661 79622 SNRNP25 ugCGCGUCCGGUCUCUGGGUCCGu |:| |||| | ||||||| uuGUGGUGGCCUCA-CCCCAGGCa 2 23 349 371 [hg19:16:107242-107264:+] 0.3684 152 7 -29.46 -0.1004 MIMAT0003324 hsa-miR-661 79622 SNRNP25 ugcGCGUCCGGUCUCUGGGU-CCGu | || | | ||||||| ||| aguCACAUGGC--AGACCCACGGCc 2 22 493 515 [hg19:16:107386-107408:+] 0.5099 122 0 -22.39 -0.1579 MIMAT0004813 hsa-miR-411* 79622 SNRNP25 ccaaucaccUGGCACAAU-GUAu ||:|||||| ||| aaccacacaACUGUGUUACCAUg 2 14 455 477 [hg19:16:107598-107620:+] 0.5286 125 0 -15.02 -0.4587 MIMAT0004813 hsa-miR-411* 79622 SNRNP25 ccaaucaccUGGCACAAU-GUAu ||:|||||| ||| aaccacacaACUGUGUUACCAUg 2 14 705 727 [hg19:16:107598-107620:+] 0.5286 125 0 -15.02 -0.4102 MIMAT0004984 hsa-miR-941 79622 SNRNP25 cguguaCACGUGUGUCGGC-CCAc ||| ::|||||| ||| -----cGUGGUUGCAGCCGUGGUu 2 18 1 19 [hg19:16:105766-105784:+] 0.6182 125 0 -19.97 -0.1657 MIMAT0005586 hsa-miR-1231 79622 SNRNP25 cgUCGACAGGCGGGUCUGUg || || | :||||||| aaAG-UGAGCCUCCAGACAg 2 19 244 262 [hg19:16:107137-107155:+] 0.5571 148 7 -18.46 -0.2349 MIMAT0005924 hsa-miR-1270 79622 SNRNP25 ugUGUCGAGAAGGUA-UAGAGGUc || |: :| |||| ||||||| caACUGUGUUACCAUGAUCUCCAc 2 22 462 485 [hg19:16:107605-107628:+] 0.5286 164 7 -17.29 -0.2900 MIMAT0005924 hsa-miR-1270 79622 SNRNP25 ugUGUCGAGAAGGUA-UAGAGGUc || |: :| |||| ||||||| caACUGUGUUACCAUGAUCUCCAc 2 22 712 735 [hg19:16:107605-107628:+] 0.5286 164 7 -17.29 -0.2543 MIMAT0005944 hsa-miR-1252 79622 SNRNP25 auUUACUUAAGUU--AAAGGAAGa ||| :| |:| |||||||| ggAAUCGAGACGAGGUUUCCUUCa 2 21 204 227 [hg19:16:107097-107120:+] 0.7713 155 7 -14.38 -1.1603 MIMAT0009447 hsa-miR-1972 79622 SNRNP25 acucGGUGACACGGACCGGACu :|| ||| |:||||||| ccuuUCA-UGUACUUGGCCUGa 2 19 192 212 [hg19:16:107335-107355:+] 0.4639 160 7 -23.65 -0.5541 MIMAT0009447 hsa-miR-1972 79622 SNRNP25 acucGGUGACACGGACCGGACu :|| ||| |:||||||| ccuuUCA-UGUACUUGGCCUGa 2 19 442 462 [hg19:16:107335-107355:+] 0.4639 160 7 -23.65 -0.4983 MIMAT0009447 hsa-miR-1972 79622 SNRNP25 acuCGGUGACACGGACC-GGACu ||||| || ||||| |||| aguGCCACAGU-CCUGGACCUGa 2 20 29 50 [hg19:16:105794-105815:+] 0.6564 137 0 -29.79 -0.6072 MIMAT0009451 hsa-miR-1976 79622 SNRNP25 uguCGUUCCUCCCGUCCUCc |||: ||||||| cguGCAGCUCAAGCAGGAGc 2 18 70 89 [hg19:16:105835-105854:+] 0.6564 141 7 -17.22 -0.3435 MIMAT0009451 hsa-miR-1976 79622 SNRNP25 ugucguuccuccCGUCCUCc ||||||| caucugaccucuGCAGGAGa 2 9 140 159 [hg19:16:106561-106580:+] 0.7506 140 7 -11.73 -0.9309 MIMAT0011775 hsa-miR-2276 79622 SNRNP25 ggagcGGAGACUGUGA-ACGUCu | |||||| || ||||| cguacCAUCUGAC-CUCUGCAGg 2 18 135 156 [hg19:16:106556-106577:+] 0.7506 127 0 -23.23 -0.3174 MIMAT0012734 hsa-miR-711 79622 SNRNP25 gaaugcagagagggACCCAGGg ||||||| uuucccagcaggaaUGGGUCCu 2 9 45 66 [hg19:16:107188-107209:+] 0.4643 140 7 -20.15 -0.2755 MIMAT0012734 hsa-miR-711 79622 SNRNP25 gaaugcagagagggACCCAGGg ||||||| uuucccagcaggaaUGGGUCCu 2 9 295 316 [hg19:16:107188-107209:+] 0.4643 140 7 -20.15 -0.2391 MIMAT0014979 hsa-miR-3117 79622 SNRNP25 gaCCGUGAUAUACUCAGGAUa ||:|| | : |||||||| uuGGUAC-AGGCGAGUCCUAu 2 20 384 403 [hg19:16:107527-107546:+] 0.5224 157 7 -22.70 -0.1580 MIMAT0014979 hsa-miR-3117 79622 SNRNP25 gaCCGUGAUAUACUCAGGAUa ||:|| | : |||||||| uuGGUAC-AGGCGAGUCCUAu 2 20 634 653 [hg19:16:107527-107546:+] 0.5224 157 7 -22.70 -0.1365 MIMAT0014996 hsa-miR-3131 79622 SNRNP25 uuccgggaaggUGGUCAGGAGCu |: :||||||| ucccagcaggaAUGGGUCCUCGa 2 13 47 69 [hg19:16:107190-107212:+] 0.4643 144 7 -24.93 -0.3305 MIMAT0014996 hsa-miR-3131 79622 SNRNP25 uuccgggaaggUGGUCAGGAGCu |: :||||||| ucccagcaggaAUGGGUCCUCGa 2 13 297 319 [hg19:16:107190-107212:+] 0.4643 144 7 -24.93 -0.2886 MIMAT0014996 hsa-miR-3131 79622 SNRNP25 uucCGGGAAGGUGGUCAGGA-GCu || | || :|::||||| || ucaGCACAUCAGCUGGUCCUACGu 2 21 103 126 [hg19:16:105868-105882,106539-106547:+] 0.7035 128 0 -18.93 -0.2023 MIMAT0015019 hsa-miR-3147 79622 SNRNP25 aguGUGGGAGGAGUGACGGGUUGg ||||| || |||||||| ccuCACCCCAGGCA-UGCCCAACa 2 22 108 130 [hg19:16:107251-107273:+] 0.3684 159 7 -27.32 -0.1703 MIMAT0015019 hsa-miR-3147 79622 SNRNP25 aguGUGGGAGGAGUGACGGGUUGg ||||| || |||||||| ccuCACCCCAGGCA-UGCCCAACa 2 22 358 380 [hg19:16:107251-107273:+] 0.3684 159 7 -27.32 -0.1448 MIMAT0015020 hsa-miR-548v 79622 SNRNP25 accacGUUUUCAUUGACA-UCGa ||| ||||||||| ||| augccCAACAGUAACUGUCAGCa 2 18 121 143 [hg19:16:107264-107286:+] 0.4353 141 0 -17.41 -0.2421 MIMAT0015020 hsa-miR-548v 79622 SNRNP25 accacGUUUUCAUUGACA-UCGa ||| ||||||||| ||| augccCAACAGUAACUGUCAGCa 2 18 371 393 [hg19:16:107264-107286:+] 0.4353 141 0 -17.41 -0.2078 MIMAT0015023 hsa-miR-3150 79622 SNRNP25 ggUUGGAGCUCC----U--AGAGGGGUc |:|||:|||| | ||||||| aaAGCCUUGAGGCCACACCACUCCCCAa 2 21 428 455 [hg19:16:107571-107598:+] 0.5255 150 7 -28.53 -0.6527 MIMAT0015023 hsa-miR-3150 79622 SNRNP25 ggUUGGAGCUCC----U--AGAGGGGUc |:|||:|||| | ||||||| aaAGCCUUGAGGCCACACCACUCCCCAa 2 21 678 705 [hg19:16:107571-107598:+] 0.5255 150 7 -28.53 -0.5971 MIMAT0015036 hsa-miR-3162 79622 SNRNP25 gaGGGGUGGGA-AGAUGAGGGAUu ||: | || | ||||||| ggCCUGAGACUGACCUCUCCCUAg 2 22 206 229 [hg19:16:107349-107372:+] 0.4782 144 7 -21.63 -0.1286 MIMAT0015036 hsa-miR-3162 79622 SNRNP25 gaGGGGUGGGA-AGAUGAGGGAUu ||: | || | ||||||| ggCCUGAGACUGACCUCUCCCUAg 2 22 456 479 [hg19:16:107349-107372:+] 0.4782 144 7 -21.63 -0.1102 MIMAT0015044 hsa-miR-3169 79622 SNRNP25 gauaCACGGUUC---GUGUCAGGAu |||| :|| ||||||||| uguaGUGCAGAGUGCCACAGUCCUg 2 19 19 43 [hg19:16:105784-105808:+] 0.6373 161 7 -25.07 -0.1278 MIMAT0015048 hsa-miR-3173 79622 SNRNP25 acCGGACGGAUAAAGGAGGAAa ||| | |: | ||||||| gaGCCAG--UGCUCCCUCCUUu 2 21 177 196 [hg19:16:107320-107339:+] 0.4639 149 7 -17.86 -0.1460 MIMAT0015048 hsa-miR-3173 79622 SNRNP25 acCGGACGGAUAAAGGAGGAAa ||| | |: | ||||||| gaGCCAG--UGCUCCCUCCUUu 2 21 427 446 [hg19:16:107320-107339:+] 0.4639 149 7 -17.86 -0.1247 MIMAT0001630 hsa-miR-323b-5p 79622 SNRNP25 acgcuuGAGUGGUG-CCUGUUGGa ||| || |||||||| ----gcCUCCAGACAGGACAACCc 2 18 1 20 [hg19:16:107144-107163:+] 0.5571 152 7 -19.28 -0.2627 MIMAT0001630 hsa-miR-323b-5p 79622 SNRNP25 acGCUU-GAGUGGUG-CCUGUUGGa :||: ||| || |||||||| agUGAGCCUCCAGACAGGACAACCc 2 22 246 270 [hg19:16:107139-107163:+] 0.5571 155 7 -27.58 -0.1978 MIMAT0015063 hsa-miR-3183 79622 SNRNP25 aggcucGCUGAGGCUCU-CUCCg ||: :||||| |||| ggcaucCGGAAUCGAGACGAGGu 2 17 197 219 [hg19:16:107090-107112:+] 0.7713 120 0 -23.48 -0.7727 MIMAT0015064 hsa-miR-3184 79622 SNRNP25 uuuUCGAGCCAGACUC---CGGGG-AGu ||| | ||||| ||||| || gguAGCAAAGACUGAGAUUGCCCCAUCa 2 22 332 359 [hg19:16:107475-107502:+] 0.5248 120 0 -22.08 -0.3179 MIMAT0015064 hsa-miR-3184 79622 SNRNP25 uuuUCGAGCCAGACUC---CGGGG-AGu ||| | ||||| ||||| || gguAGCAAAGACUGAGAUUGCCCCAUCa 2 22 582 609 [hg19:16:107475-107502:+] 0.5248 120 0 -22.08 -0.2797 MIMAT0015378 hsa-miR-3065-3p 79622 SNRNP25 gagguuguuaUAG-GACCA-CGACu ||| ||||| |||| aacccucuucAUCACUGGUGGCUGa 2 14 16 40 [hg19:16:107159-107183:+] 0.4179 120 0 -22.09 -0.1545 MIMAT0015378 hsa-miR-3065-3p 79622 SNRNP25 gagguuguuaUAG-GACCA-CGACu ||| ||||| |||| aacccucuucAUCACUGGUGGCUGa 2 14 266 290 [hg19:16:107159-107183:+] 0.4179 120 0 -22.09 -0.1607 MIMAT0015076 hsa-miR-3192 79622 SNRNP25 aagGUGACGAUGUUGGAGG-GUCu :::| | |::|:|||| ||| cugUGUUACCAUGAUCUCCACAGc 2 21 465 488 [hg19:16:107608-107631:+] 0.5286 124 0 -18.69 -0.5950 MIMAT0015076 hsa-miR-3192 79622 SNRNP25 aagGUGACGAUGUUGGAGG-GUCu :::| | |::|:|||| ||| cugUGUUACCAUGAUCUCCACAGc 2 21 715 738 [hg19:16:107608-107631:+] 0.5286 124 0 -18.69 -0.5406 MIMAT0015078 hsa-miR-3194 79622 SNRNP25 gucGGGAG-GACCACCGAC-CGg :| || |||||||||| || ucuUCAUCACUGGUGGCUGAGCu 2 19 21 43 [hg19:16:107164-107186:+] 0.4179 133 0 -27.09 -0.1925 MIMAT0015078 hsa-miR-3194 79622 SNRNP25 gucGGGAG-GACCACCGAC-CGg :| || |||||||||| || ucuUCAUCACUGGUGGCUGAGCu 2 19 271 293 [hg19:16:107164-107186:+] 0.4179 133 0 -27.09 -0.1670 MIMAT0015083 hsa-miR-3198 79622 SNRNP25 agaGGUA-AGGGGUCCU-GAGGUg |::| |: ||| || ||||| caaCUGUGUUACCAUGAUCUCCAc 2 20 462 485 [hg19:16:107605-107628:+] 0.5286 122 0 -20.10 -0.3734 MIMAT0015083 hsa-miR-3198 79622 SNRNP25 agaGGUA-AGGGGUCCU-GAGGUg |::| |: ||| || ||||| caaCUGUGUUACCAUGAUCUCCAc 2 20 712 735 [hg19:16:107605-107628:+] 0.5286 122 0 -20.10 -0.3306 MIMAT0016865 hsa-miR-4313 79622 SNRNP25 cccaaaccccggUCCCCCGa ||||||| gcaggagcgugaAGGGGGCa 2 9 82 101 [hg19:16:105847-105866:+] 0.6564 140 7 -19.27 -0.7804 MIMAT0016869 hsa-miR-4318 79622 SNRNP25 ucguacaUGGGUGUCAc | ||||||| aguagaaAGCCACAGUa 2 11 310 326 [hg19:16:107453-107469:+] 0.5273 142 7 -13.60 -0.7547 MIMAT0016869 hsa-miR-4318 79622 SNRNP25 ucguacaUGGGUGUCAc | ||||||| aguagaaAGCCACAGUa 2 11 560 576 [hg19:16:107453-107469:+] 0.5273 142 7 -13.60 -0.6989 MIMAT0016878 hsa-miR-4257 79622 SNRNP25 gagucaGGGGUGGAGACc :|: ||||||| guaccaUCUGACCUCUGc 2 13 136 153 [hg19:16:106557-106574:+] 0.7506 144 7 -15.41 -0.3249 MIMAT0016882 hsa-miR-4253 79622 SNRNP25 ugGGGGACCUGUACGGGa |||| || ||||||| caCCCCAGG-CAUGCCCa 2 17 111 127 [hg19:16:107254-107270:+] 0.3684 158 7 -26.25 -0.1536 MIMAT0016882 hsa-miR-4253 79622 SNRNP25 ugGGGGACCUGUACGGGa |||| || ||||||| caCCCCAGG-CAUGCCCa 2 17 361 377 [hg19:16:107254-107270:+] 0.3684 158 7 -26.25 -0.1303 MIMAT0016899 hsa-miR-4264 79622 SNRNP25 uuACUGGUACUGACUCa | :| | ||||||| ggUAGCAAAGACUGAGa 2 16 332 348 [hg19:16:107475-107491:+] 0.5248 147 7 -11.70 -0.8373 MIMAT0016899 hsa-miR-4264 79622 SNRNP25 uuACUGGUACUGACUCa | :| | ||||||| ggUAGCAAAGACUGAGa 2 16 582 598 [hg19:16:107475-107491:+] 0.5248 147 7 -11.70 -0.7832 MIMAT0016915 hsa-miR-4284 79622 SNRNP25 uaccccacuaCACUCGGg ||||||| cuaggacaggGUGAGCCa 2 9 165 182 [hg19:16:107308-107325:+] 0.4830 140 7 -15.80 -0.1811 MIMAT0016915 hsa-miR-4284 79622 SNRNP25 uacCCCACUACACUCGGg || | ||||||| ugaGGCAAAAGUGAGCCu 2 16 237 254 [hg19:16:107130-107147:+] 0.5571 143 7 -15.13 -0.3216 MIMAT0016915 hsa-miR-4284 79622 SNRNP25 uaccccacuaCACUCGGg ||||||| cuaggacaggGUGAGCCa 2 9 415 432 [hg19:16:107308-107325:+] 0.4830 140 7 -15.80 -0.1550 MIMAT0000226 hsa-miR-196a 79622 SNRNP25 ggguuGUUGUACUUUGA-UGGAu :::| |||:||| |||| guacuUGGCCUGAGACUGACCUc 2 18 200 222 [hg19:16:107343-107365:+] 0.4782 125 0 -15.57 -0.1567 MIMAT0000226 hsa-miR-196a 79622 SNRNP25 ggguuGUUGUACUUUGA-UGGAu :::| |||:||| |||| guacuUGGCCUGAGACUGACCUc 2 18 450 472 [hg19:16:107343-107365:+] 0.4782 125 0 -15.57 -0.1345 MIMAT0000273 hsa-miR-216a 79622 SNRNP25 agugUCAACG-GUC-GACUCUAAu :|| || || |||||||| ccugGGUAGCAAAGACUGAGAUUg 2 19 328 351 [hg19:16:107471-107494:+] 0.5248 152 7 -16.35 -0.1681 MIMAT0000273 hsa-miR-216a 79622 SNRNP25 agugUCAACG-GUC-GACUCUAAu :|| || || |||||||| ccugGGUAGCAAAGACUGAGAUUg 2 19 578 601 [hg19:16:107471-107494:+] 0.5248 152 7 -16.35 -0.1454 MIMAT0000415 hsa-let-7i 79622 SNRNP25 uugUCGUGUUUGAU-GA-UGGAGu || ||: || | || ||||| uggAGGACGUACCAUCUGACCUCu 2 20 128 151 [hg19:16:106549-106572:+] 0.7506 122 0 -14.96 -0.3219 MIMAT0000450 hsa-miR-149 79622 SNRNP25 ccCUCACUUCUGUGC--CUCGGUCu || | |:|||| | ||||||| agGACU-AGGACAGGGUGAGCCAGu 2 22 161 184 [hg19:16:107304-107327:+] 0.4830 158 7 -24.91 -0.1094 MIMAT0004679 hsa-miR-296-3p 79622 SNRNP25 ccucuCGGAGG--UG---GGUUGGGAg |||||| || ||||||| -----GCCUCCAGACAGGACAACCCUc 2 18 1 22 [hg19:16:107144-107165:+] 0.5571 147 7 -26.54 -0.2142 MIMAT0004679 hsa-miR-296-3p 79622 SNRNP25 ccuCUCGGAGG--UG---GGUUGGGAg |||||||| || ||||||| aguGAGCCUCCAGACAGGACAACCCUc 2 20 246 272 [hg19:16:107139-107165:+] 0.5571 157 7 -33.06 -0.4041 MIMAT0000722 hsa-miR-370 79622 SNRNP25 uggUCCAAGGUGGGGUCGUCCg || ||:: :||||||||| cugAGCUUUU-UCCCAGCAGGa 2 20 37 57 [hg19:16:107180-107200:+] 0.4928 161 7 -23.31 -0.2794 MIMAT0000722 hsa-miR-370 79622 SNRNP25 uggUCCAAGGUGGGGUCGUCCg || ||:: :||||||||| cugAGCUUUU-UCCCAGCAGGa 2 20 287 307 [hg19:16:107180-107200:+] 0.4928 161 7 -23.31 -0.2356 MIMAT0000773 hsa-miR-346 79622 SNRNP25 ucuccGUCCGUACGCCCGUCUGu :|| || : ||||||| ugcccUAGUCACAU-GGCAGACc 2 19 237 258 [hg19:16:107380-107401:+] 0.4926 144 7 -13.54 -0.1467 MIMAT0000773 hsa-miR-346 79622 SNRNP25 ucuccGUCCGUACGCCCGUCUGu :|| || : ||||||| ugcccUAGUCACAU-GGCAGACc 2 19 487 508 [hg19:16:107380-107401:+] 0.4926 144 7 -13.54 -0.1265 MIMAT0002177 hsa-miR-486-5p 79622 SNRNP25 gagCCCCGUC-GAGUCAUGUCCu ||| || |::||||||| aagGGGAGAGAAUUGGUACAGGc 2 20 372 394 [hg19:16:107515-107537:+] 0.5224 154 7 -23.87 -0.3058 MIMAT0002177 hsa-miR-486-5p 79622 SNRNP25 gagCCCCGUC-GAGUCAUGUCCu ||| || |::||||||| aagGGGAGAGAAUUGGUACAGGc 2 20 622 644 [hg19:16:107515-107537:+] 0.5224 154 7 -23.87 -0.2686 MIMAT0004763 hsa-miR-488 79622 SNRNP25 cugguucuuuaucGGAAAGUu ||||||| gccagugcucccuCCUUUCAu 2 9 179 199 [hg19:16:107322-107342:+] 0.4639 140 7 -13.00 -0.1863 MIMAT0004763 hsa-miR-488 79622 SNRNP25 cugguucuuuaucGGAAAGUu ||||||| gccagugcucccuCCUUUCAu 2 9 429 449 [hg19:16:107322-107342:+] 0.4639 140 7 -13.00 -0.1600

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G048789 SNRNP25 Homo sapiens 79622

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End SNRNP25; C16orf33 1 305 100 809.321 + chr16 107143 107448 SNRNP25; C16orf33 306 324 29.77 809.321 + chr16 107448 107467 SNRNP25; C16orf33 325 515 24.307 809.321 + chr16 107467 107658 SNRNP25; C16orf33 516 524 21.151 809.321 + chr16 107658 107667 SNRNP25; C16orf33 525 525 11.492 809.321 + chr16 107667 107668 SNRNP25; C16orf33 526 544 10.875 809.321 + chr16 107668 107687 SNRNP25; C16orf33 545 551 4.519 809.321 + chr16 107687 107694

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile C16orf33 hsa-miR-10a beg:159 end:177 pic:3' GTGTTTAAGCCTAGA--TGTCCCAT 5'& ||| |||||||. &5' ---------GGACTAGGACAGGGTG 3' C16orf33 hsa-miR-10b beg:159 end:177 pic:3' GTGTTTAAGCCAAGA--TGTCCCAT 5'& || |||||||. &5' ---------GGACTAGGACAGGGTG 3' C16orf33 hsv2-miR-H23 beg:247 end:267 pic:3' CGACCGTTCGAGGTGCCGGA 5'& ||||| | ||||||||| &5' --TGGCAGAC-CCACGGCCT 3' C16orf33 hsa-miR-4253 beg:109 end:127 pic:3' TGGGGGACCTGTACGGGA 5'& ||||| |.||||||| &5' ACCCCA--GGCATGCCC- 3' C16orf33 hsa-miR-1231 beg:0 end:12 pic:3' CGTCGACAGGCGGGTCTGTG 5'& || .||||||| &5' --------CC-TCCAGACA- 3' C16orf33 hsa-miR-194star beg:257 end:276 pic:3' GTCTATTGTCGT-CGGGGTGACC 5'& ||.|| | ||||||| &5' ------ACGGCCTGGCCCACTG- 3' C16orf33 hsa-miR-583 beg:70 end:86 pic:3' CATTACCCTGGAA-GGAGAAAC 5'& |.| ||||||| &5' --------ATCGTGCCTCTTT- 3' C16orf33 hsa-miR-516b beg:0 end:10 pic:3' TTTCACGAAGAATGGAGGTCTA 5'& .|||||||| &5' ------------GCCTCCAGA- 3' C16orf33 ebv-miR-BART17-3p beg:100 end:125 pic:3' TGATTCC-CC----TGTGGTCCGTATGT 5'& || || || ||||||||.| &5' -----GGTGGCCTCACCCCAGGCATGC- 3' C16orf33 ebv-miR-BART20-3p beg:178 end:201 pic:3' CCATTGTC-CGACAC--GGAAGTAC 5'& ||| ||| |.|||||| &5' -----CAGTGCTCCCTCCTTTCATG 3' C16orf33 hsa-miR-554 beg:151 end:169 pic:3' TGACCGACTCAGTCCTGATCG 5'& ||| |||||||||| &5' ---GGCCC--TCAGGACTAG- 3' C16orf33 hsa-let-7gstar beg:256 end:280 pic:3' CGTTCCGTCACCGG---ACATGTC 5'& || ||| ||||| ||||.| &5' -CACGGCC-TGGCCCACTGTATA- 3' C16orf33 hsa-miR-1231 beg:101 end:123 pic:3' CGTCGACAGGCGGGTCTGTG 5'& | || || |||||.||. &5' GTGGCC-TCACCCCAGGCAT 3' C16orf33 hsa-miR-1274b beg:159 end:176 pic:3' ACCGCGGGCTTGTCCCT 5'& || |. |.|||||| &5' -GGA-CTAGGACAGGG- 3' C16orf33 hsa-miR-1275 beg:210 end:228 pic:3' CTGTC-GGAGAGGGGGTG 5'& ||| | ||||||||. &5' GACTGACCTCTCCCT--- 3' C16orf33 hsa-miR-1279 beg:86 end:103 pic:3' TCTTTCTTCGTTATACT 5'& ||||||.| |. |.|| &5' AGAAAGGA-CGTTGTG- 3' C16orf33 hsa-miR-1295 beg:193 end:213 pic:3' AGTGGGTCTAGACGCCGGATT 5'& |||. .| || .|||||.| &5' TCATGTA---CT-TGGCCTGA 3' C16orf33 hsa-miR-1295 beg:253 end:268 pic:3' AGTGGGTCTAGACGCCGGATT 5'& ||||| ||||||. &5' --ACCCA------CGGCCTG- 3' C16orf33 hsa-miR-1321 beg:186 end:196 pic:3' TAGTGTAAGTGGAGGGAC 5'& || |||||.| &5' -------TC-CCTCCTT- 3' C16orf33 hsa-miR-140-3p beg:91 end:107 pic:3' GGCACCAAGATGGGACACCAT 5'& || || .||||||. &5' ----GG----ACGTTGTGGTG 3' C16orf33 hsa-miR-146b-3p beg:157 end:177 pic:3' GGTCTTGACTCAGGTGTCCCGT 5'& |||.||| || ||||||. &5' -CAGGACT-AGG--ACAGGGT- 3' C16orf33 hsa-miR-148bstar beg:146 end:167 pic:3' CGGACTCACATATTGTCTTGAA 5'& ||||.| | |||.||| &5' -CCTGGG-GGCCCTCAGGACT- 3' C16orf33 hsa-miR-197 beg:91 end:107 pic:3' CGACCCACCTCTTCCACCACTT 5'& ||| . ||||||. &5' -------GGACGTTGTGGTGG- 3' C16orf33 hsa-miR-1972 beg:189 end:213 pic:3' ACTCGGTG---ACACGGACCGGACT 5'& || ||| |.|||||||| &5' ----CCTTTCATGTACTTGGCCTGA 3' C16orf33 hsa-miR-2113 beg:73 end:92 pic:3' CACTGTCTCGGTTC--GTGTTTA 5'& | ||| ||||.| &5' ------GTGCCTCTTTCACAGA- 3' C16orf33 hsa-miR-223 beg:201 end:220 pic:3' ACCCCATAAACTG---TTTGACTGT 5'& |||.| |.|||||| &5' --------TTGGCCTGAGACTGAC- 3' C16orf33 hsa-miR-23astar beg:139 end:160 pic:3' TTTAGGGTAG--GGGTCCTTGGGG 5'& ||| || ||..|||. &5' ------CATAAACCTGGGGGCCCT 3' C16orf33 hsa-miR-26bstar beg:156 end:174 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& .||.| ||.||||| &5' ---TCAGGACT---AGGACAGG 3' C16orf33 hsa-miR-27bstar beg:24 end:46 pic:3' CAAGTGGTTAGTCGATTCGAGA 5'& |||| .| .|||.||||.| &5' --TCACTGGT-GGCTGAGCTTT 3' C16orf33 hsa-miR-2909 beg:223 end:244 pic:3' GGTTCTCTACAACCGGGATTG 5'& |.|.| ||||||. &5' CTAGGTCCAAAT-GCCCTAG- 3' C16orf33 hsa-miR-299-5p beg:165 end:183 pic:3' TACATACACCCTG--CCATTTGGT 5'& |||| |||.|.||| &5' ---------GGACAGGGTGAGCCA 3' C16orf33 hsa-miR-30c-2star beg:37 end:53 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |||.||.|||||| &5' ---------AGCTTTTTCCCAG 3' C16orf33 hsa-miR-3164 beg:227 end:250 pic:3' GC-GGTAAA-GGGAATTTCAGTGT 5'& | ||| |||| ||||||| &5' -GTCCAAATGCCCT---AGTCACA 3' C16orf33 hsa-miR-3173 beg:173 end:196 pic:3' ACCGGACGGATAAA--GGAGGAAA 5'& ||. ||| .| |||||||| &5' -GGTGAGCCAGTGCTCCCTCCTTT 3' C16orf33 hsa-miR-3175 beg:211 end:228 pic:3' TGCAGTGACGCAAGAGAGGGGC 5'& |||| |||||||. &5' -----ACTGAC--CTCTCCCT- 3' C16orf33 hsa-miR-3181 beg:197 end:213 pic:3' GGCCGCGGCTCCCGGGCTA 5'& |. ||||.|| &5' -----GTACTTGGCCTGA- 3' C16orf33 hsa-miR-3190-5p beg:71 end:90 pic:3' AGAGACCGGCAGATGGAAGGTGT 5'& || ||| .|||.|||| &5' --TCGTGCC-----TCTTTCACA 3' C16orf33 hsa-miR-3195 beg:252 end:272 pic:3' TTGGGC-CCGGGCCGCGC 5'& .|||| ||||.||| | &5' GACCCACGGCCTGGCCC- 3' C16orf33 hsa-miR-330-5p beg:155 end:174 pic:3' CGGA-TTCTGTGTCCGGGTCTCT 5'& ||| |.||| .||| |||.| &5' -CCTCAGGAC-TAGGA-CAGGG- 3' C16orf33 hsa-miR-339-5p beg:150 end:176 pic:3' GCACTCGAGGA--CCT---CCTGTCCCT 5'& |.|| ||| ||| |||||||| &5' ---GGGC-CCTCAGGACTAGGACAGGG- 3' C16orf33 hsa-miR-361-3p beg:134 end:156 pic:3' TTTAGTCTTAGTGTGGACCCCCT 5'& .|||| || ||||||||| &5' --GTCAGCATAA-ACCTGGGGG- 3' C16orf33 hsa-miR-370 beg:33 end:57 pic:3' TGGTCCAAGGTGGGGTCGTCCG 5'& .|. | |. .||||||||| &5' GCTGAGCTTTTTCCCAGCAGG- 3' C16orf33 hsa-miR-377star beg:202 end:224 pic:3' CTTAAGTGG-TTCCCGTTGGAGA 5'& || .|| .|| ..|||||| &5' ---TTGGCCTGAGACTGACCTCT 3' C16orf33 hsa-miR-4264 beg:30 end:42 pic:3' TTACTGGTACTGACTCA 5'& .||.||||| &5' -------GTGGCTGAG- 3' C16orf33 hsa-miR-4299 beg:189 end:209 pic:3' CGGAGAGTACAGTGGTCG 5'& |||.|||||| . || &5' -CCTTTCATGTACTTGGC 3' C16orf33 hsa-miR-4312 beg:159 end:177 pic:3' ACCCCTGTCCTTGTTCCGG 5'& |||| |.|||.||. &5' ---GGACTAGGACAGGGT- 3' C16orf33 hsa-miR-4316 beg:94 end:115 pic:3' GTGGT-CGATCGGAGTGG 5'& |. . | |.|||||||| &5' CGTTGTGGTGGCCTCACC 3' C16orf33 hsa-miR-484 beg:199 end:213 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||| .|||||| &5' -----------ACTTGGCCTGA 3' C16orf33 hsa-miR-488 beg:46 end:70 pic:3' CTGGT--TCTTTATCGGAAAGTT 5'& ||| ||.|||.| . ||.| &5' --CCAGCAGGAATGGGTCCTCGA 3' C16orf33 hsa-miR-492 beg:220 end:234 pic:3' TTCTTAGAACAGGGCGTCCAGGA 5'& |||| .|||||| &5' ----------TCCC-TAGGTCC- 3' C16orf33 hsa-miR-542-5p beg:49 end:70 pic:3' AGAGCACTGTACTA--CTAGGGGCT 5'& .|| || |.|||.||| &5' -------GCAGGAATGGGTCCTCGA 3' C16orf33 hsa-miR-550 beg:103 end:123 pic:3' CCCGAGAATGAGGGAGTCCGTGA 5'& ||| || | ||| ||||||. &5' -GGC-CT--CACCC-CAGGCAT- 3' C16orf33 hsa-miR-564 beg:61 end:81 pic:3' CGGACGACT-GTGGCACGGA 5'& ||| | ||.||||||| &5' -CCT-CGAATCATCGTGCCT 3' C16orf33 hsa-miR-582-5p beg:259 end:278 pic:3' TCATTGACCA-ACTTGTTGACATT 5'& || || | |||||| &5' -------GGCCTGGCCCACTGTA- 3' C16orf33 hsa-miR-585 beg:113 end:128 pic:3' ATCGTATGTCTATGCGGGT 5'& ||| |.||||| &5' -------CAGGCATGCCCA 3' C16orf33 hsa-miR-615-5p beg:137 end:161 pic:3' CTAGGCTCGT-----GGCCCCTGGGGG 5'& .| |||| |.||||.|||.| &5' ---TC-AGCATAAACCTGGGGGCCCTC 3' C16orf33 hsa-miR-628-5p beg:122 end:145 pic:3' GGAGATCATTTATACAGTCGTA 5'& || ||||| ||||||||| &5' CCAACAGTAAC--TGTCAGCAT 3' C16orf33 hsa-miR-637 beg:145 end:163 pic:3' TGCGTCTCGGGCTTTCGGGGGTCA 5'& ||.| .||||.||| &5' --------CCTGGGGGCCCTCAG- 3' C16orf33 hsa-miR-637 beg:0 end:9 pic:3' TGCGTCTCGGGCTTTCGGGGGTCA 5'& |||.|||| &5' ---------------GCCTCCAG- 3' C16orf33 hsa-miR-654-5p beg:256 end:275 pic:3' CGTGTACAAGACGCCGGGTGGT 5'& |||. | .|||||||. &5' -CACGG---CC-TGGCCCACT- 3' C16orf33 hsa-miR-660 beg:43 end:64 pic:3' GTTGAGGCTATACGTTACCCAT 5'& .||| | ||||||| &5' ---TTCCCAGCAGGAATGGGT- 3' C16orf33 hsa-miR-661 beg:101 end:122 pic:3' TGCGCGTCCGGTCTCTGGGTCCGT 5'& |. |||| |||||||| &5' ----GT-GGCCTCAC-CCCAGGCA 3' C16orf33 hsa-miR-665 beg:100 end:120 pic:3' TCC-CCGGAGTCGGAGGACCA 5'& || ||||||| || || || &5' -GGTGGCCTCA-CC-CCAGG- 3' C16orf33 hsa-miR-892b beg:162 end:186 pic:3' AGATGGGTCTT---TC-CTCGGTCAC 5'& |.||.| .| ||||||||| &5' -----CTAGGACAGGGTGAGCCAGTG 3' C16orf33 hsa-miR-939 beg:174 end:192 pic:3' GTGGGGGTCTCGGAGTCGAGGGGT 5'& ||||| ||||||. &5' --------GAGCCAGTGCTCCCT- 3' C16orf33 hsa-miR-99bstar beg:26 end:45 pic:3' GCCTGGGTGT---CTGTGCTCGAAC 5'& .||| |.| .|||||| &5' -----TCACTGGTGGC-TGAGCTT- 3' C16orf33 hsv1-miR-H1 beg:177 end:200 pic:3' AGGTGA--AGGGCAGGAAGGTAG 5'& ||| | |||| |||||.||| &5' -CCAGTGCTCCC-TCCTTTCAT- 3' C16orf33 hsv1-miR-H8 beg:13 end:33 pic:3' CTTGGGGGAC-TGG-GATATAT 5'& |||||.|| |.| ||. &5' -AACCCTCTTCATCACTG---- 3' C16orf33 hsv2-miR-H4-3p beg:104 end:123 pic:3' CTCAAGCGATCC---GTTCGTGCC 5'& || ||.|||.| &5' ------GCCTCACCCCAGGCATG- 3' C16orf33 hsv2-miR-H6 beg:182 end:200 pic:3' CGTAGGGGAGCGGAAGGTAA 5'& || ||||. ||||.||| &5' GC-TCCCT---CCTTTCAT- 3' C16orf33 kshv-miR-K12-10astar beg:98 end:121 pic:3' TCACCACCATAGCGGGGTTCGG 5'& ||||||| || |||||.|| &5' -GTGGTGGCCTCACCCCAGGC- 3'

DNA & RNA Element - SomamiR Gene Name Mutation Mutation ID miR ID Chromosome Location Ref Alt mirsite mirseed Seed Class Sample Name Cancer Type SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-1233-5p chr16 55482 C A tcaaCTCCCAaatag AGUGGGAG m6c LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-1238-5p chr16 55482 C A tcaACTCACaaatag GUGAGUGG m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-1273h-5p chr16 55482 C A tcaaCTCCCAaatag CUGGGAGG m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-1294 chr16 55482 C A tcaaCTCACAaatag UGUGAGGU m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-1302 chr16 55482 C A tcaacTCCCAAatag UUGGGACA m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-2113 chr16 55482 C A tcaactCACAAATag AUUUGUGC m7a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-30b-3p chr16 55482 C A tcaaCTCCCAaatag CUGGGAGG m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-30c-1-3p chr16 55482 C A tcaaCTCCCAaatag CUGGGAGA m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-30c-2-3p chr16 55482 C A tcaaCTCCCAaatag CUGGGAGA m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-3122 chr16 55482 C A tcaacTCCCAAatag GUUGGGAC m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-3174 chr16 55482 C A tcaACTCACaaatag UAGUGAGU m6c LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-3192-5p chr16 55482 C A tcaaCTCCCAaatag UCUGGGAG m6c LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-3611 chr16 55482 C A tcaacTCACAAatag UUGUGAAG m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-3689a-3p chr16 55482 C A tcaaCTCCCAaatag CUGGGAGG m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-3689b-3p chr16 55482 C A tcaaCTCCCAaatag CUGGGAGG m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-3689c chr16 55482 C A tcaaCTCCCAaatag CUGGGAGG m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-3913-5p chr16 55482 C A tcaacTCCCAAAtag UUUGGGAC m7a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-4294 chr16 55482 C A tcaACTCCCaaatag GGGAGUCU m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-4300 chr16 55482 C A tcaaCTCCCAaatag UGGGAGCU m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-4425 chr16 55482 C A tcaacTCCCAAatag UGUUGGGA m6c LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-450a-1-3p chr16 55482 C A tcaacTCCCAAatag AUUGGGAA m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-450b-3p chr16 55482 C A tcaacTCCCAAatag UUGGGAUC m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-4653-3p chr16 55482 C A tcAACTCCcaaatag UGGAGUUA m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-4658 chr16 55482 C A tcaACTCACaaatag GUGAGUGU m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-4677-3p chr16 55482 C A tcaaCTCACAaatag UCUGUGAG m6c LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-4728-5p chr16 55482 C A tcaaCTCCCAaatag UGGGAGGG m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-4758-5p chr16 55482 C A tcaACTCACaaatag GUGAGUGG m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-5002-5p chr16 55482 C A tcaactcCCAAATag AAUUUGGU m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-5010-3p chr16 55482 C A tcaactCACAAAtag UUUUGUGU m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-504-3p chr16 55482 C A tcaACTCCCaaatag GGGAGUGC m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-5591-5p chr16 55482 C A tcaaCTCCCAaatag UGGGAGCU m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-571 chr16 55482 C A tCAACTCAcaaatag UGAGUUGG m7a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-627-5p chr16 55482 C A tcaACTCACaaatag GUGAGUCU m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6513-5p chr16 55482 C A tcaacTCCCAAAtag UUUGGGAU m7a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6728-5p chr16 55482 C A tcaacTCCCAAatag UUGGGAUG m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6731-5p chr16 55482 C A tcaaCTCCCAaatag UGGGAGAG m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6740-5p chr16 55482 C A tcaactCCCAAAtag AGUUUGGG m6c LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6778-5p chr16 55482 C A tcaaCTCCCAaatag AGUGGGAG m6c LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6779-5p chr16 55482 C A tcaaCTCCCAaatag CUGGGAGG m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6780a-5p chr16 55482 C A tcaaCTCCCAAatag UUGGGAGG m7a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6785-5p chr16 55482 C A tcaaCTCCCAaatag UGGGAGGG m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6788-5p chr16 55482 C A tcaaCTCCCAaatag CUGGGAGA m6b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6790-5p chr16 55482 C A tcaACTCACaaatag GUGAGUGU m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6827-5p chr16 55482 C A tcaaCTCCCAaatag UGGGAGCC m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6869-5p chr16 55482 C A tcaACTCACaaatag GUGAGUAG m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-6871-5p chr16 55482 C A tcaaCTCCCAaatag CAUGGGAG m6c LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-7106-5p chr16 55482 C A tcaaCTCCCAaatag UGGGAGGA m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-758-3p chr16 55482 C A tcaacTCACAAAtag UUUGUGAC m7a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-8085 chr16 55482 C A tcaaCTCCCAaatag UGGGAGAG m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-887-5p chr16 55482 C A tcaaCTCCCAAatag CUUGGGAG m7b LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55482C>A COSM396690 hsa-miR-937-5p chr16 55482 C A tcaACTCACaaatag GUGAGUCA m6a LUAD-S01341 [lung][NS][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-1296-5p chr16 55489 G T ccaaataGCCCTAga UUAGGGCC m6b TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-135a-3p chr16 55489 G T ccaaataTCCCTAga UAUAGGGA m6c TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-138-2-3p chr16 55489 G T ccAAATAGCcctaga GCUAUUUC m7a TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-144-5p chr16 55489 G T ccaaATATCCctaga GGAUAUCA m6a TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-27a-5p chr16 55489 G T ccaaatAGCCCTaga AGGGCUUA m6a TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-2909 chr16 55489 G T ccaaataGCCCTAga GUUAGGGC m6c TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-3145-3p chr16 55489 G T ccAAATATCcctaga AGAUAUUU m7b TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-3158-3p chr16 55489 G T ccaaatAGCCCTaga AAGGGCUU m6b TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-3162-5p chr16 55489 G T ccaaataTCCCTAga UUAGGGAG m6b TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-3201 chr16 55489 G T ccaaATATCCCtaga GGGAUAUG m7a TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-4446-3p chr16 55489 G T ccaaatAGCCCTaga CAGGGCUG m6b TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-4489 chr16 55489 G T ccaaaTAGCCCtaga UGGGGCUA m6c TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-4721 chr16 55489 G T ccaaatAGCCCTaga UGAGGGCU m6c TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-4791 chr16 55489 G T ccaaATATCCctaga UGGAUAUG m6b TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-5001-5p chr16 55489 G T ccaaatAGCCCTaga AGGGCUGG m6a TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-5088-5p chr16 55489 G T ccaaatAGCCCTaga CAGGGCUC m6b TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-6069 chr16 55489 G T ccaaaTAGCCCtaga GGGCUAGG m6a TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-6074 chr16 55489 G T ccaAATATCcctaga GAUAUUCA m6a TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-638 chr16 55489 G T ccaaatATCCCTaga AGGGAUCG m6a TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-664b-5p chr16 55489 G T ccaaaTAGCCCtaga UGGGCUAA m6b TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.55489G>T COSM298517 hsa-miR-6757-5p chr16 55489 G T ccaaatATCCCTAga UAGGGAUG m7a TCGA-AA-A00K-01 [large_intestine][colon][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-105-3p chr16 57096 C T cggCATCCGgaatcg ACGGAUGU m6b RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-1180-3p chr16 57096 C T cggcatCCGGAAtcg UUUCCGGC m6b RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-1245b-3p chr16 57096 C T cggCATCTGgaatcg UCAGAUGA m6b RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-1255b-5p chr16 57096 C T cggCATCCGgaatcg CGGAUGAG m6a RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-198 chr16 57096 C T cggcaTCTGGAatcg GGUCCAGA m6c RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-3180-5p chr16 57096 C T cggcaTCTGGAAtcg CUUCCAGA m7b RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-4664-3p chr16 57096 C T cggcatCCGGAAtcg CUUCCGGU m6b RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-4708-5p chr16 57096 C T cgGCATCTggaatcg AGAGAUGC m6c RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-488-5p chr16 57096 C T cggcATCTGGaatcg CCCAGAUA m6b RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-520a-5p chr16 57096 C T cggcaTCTGGAatcg CUCCAGAG m6b RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-525-5p chr16 57096 C T cggcaTCTGGAatcg CUCCAGAG m6b RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-5683 chr16 57096 C T cggCATCTGgaatcg UACAGAUG m6c RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-6512-3p chr16 57096 C T cggcatCTGGAAtcg UUCCAGCC m6a RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57096C>T COSM4778990 hsa-miR-6720-5p chr16 57096 C T cggcatCTGGAAtcg UUCCAGCC m6a RK285_C01 [liver][NS][carcinoma][NS] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-3150a-5p chr16 57107 C T atcgagaCGAGGTTt CAACCUCG m7b TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-3150b-5p chr16 57107 C T atcgagaCGAGGTTt CAACCUCG m7b TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-340-3p chr16 57107 C T atcGAGACGaggttt UCCGUCUC m6c TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-3675-3p chr16 57107 C T atcGAGATGaggttt CAUCUCUA m6a TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-452-3p chr16 57107 C T atcgAGATGAGgttt CUCAUCUG m7a TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-4655-3p chr16 57107 C T atcgagACGAGGttt ACCCUCGU m6c TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-4777-3p chr16 57107 C T atcgagaTGAGGTtt AUACCUCA m6c TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-6072 chr16 57107 C T atcgaGATGAGGttt UCCUCAUC m7b TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-6790-3p chr16 57107 C T atcgagaCGAGGTtt CGACCUCG m6c TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-6827-3p chr16 57107 C T atcGAGACGaggttt ACCGUCUC m6c TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-6870-3p chr16 57107 C T atcgaGATGAGgttt GCUCAUCC m6b TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57107C>T COSM3420740 hsa-miR-6891-3p chr16 57107 C T atcgaGATGAGGttt CCCUCAUC m7b TCGA-BM-6198-01 [large_intestine][rectum][carcinoma][adenocarcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-1272 chr16 57122 C T cctTCATCAaaaagc GAUGAUGA m6c TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-129-5p chr16 57122 C T ccttcatCAAAAAGc CUUUUUGC m7a TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-155-5p chr16 57122 C T ccttCATTAAaaagc UUAAUGCU m6a TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-2052 chr16 57122 C T ccttcaTCAAAAagc UGUUUUGA m6c TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-3646 chr16 57122 C T ccTTCATTaaaaagc AAAAUGAA m6c TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-3682-3p chr16 57122 C T cctTCATCAaaaagc UGAUGAUA m6a TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-4502 chr16 57122 C T cctTCATCAaaaagc GCUGAUGA m6c TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-569 chr16 57122 C T ccttCATTAAaaagc AGUUAAUG m6c TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-580-5p chr16 57122 C T cctTCATTAaaaagc UAAUGAUU m6a TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma] SNRNP25 chr16:g.57122C>T COSM702015 hsa-miR-7856-5p chr16 57122 C T ccttcaTTAAAAagc UUUUAAGG m6a TCGA-33-4533-01 [lung][NS][carcinoma][squamous_cell_carcinoma]

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region SNRNP25 High_conserved miR-503 chr16:104040 7-mer-m8 51 CDS, ncRNA SNRNP25 High_conserved miR-7/7ab chr16:106110 7-mer-A1 4 ncRNA SNRNP25 High_conserved miR-9/9ab chr16:107575 7-mer-m8 11 3pUTR SNRNP25 High_conserved miR-150/5127 chr16:103138 7-mer-A1 9 5pUTR SNRNP25 High_conserved miR-19ab chr16:105100 8-mer 11 ncRNA SNRNP25 High_conserved miR-1ab/206/613 chr16:105902 7-mer-m8 4 ncRNA SNRNP25 High_conserved miR-214/761/3619-5p chr16:103740 7-mer-m8 2 5pUTR SNRNP25 High_conserved miR-216a chr16:105296 7-mer-m8 20 ncRNA SNRNP25 High_conserved miR-216a chr16:107494 7-mer-m8 4 3pUTR SNRNP25 High_conserved miR-217 chr16:105797 7-mer-m8 13 ncRNA SNRNP25 High_conserved miR-22/22-3p chr16:103623 7-mer-m8 11 5pUTR SNRNP25 High_conserved miR-223 chr16:105170 8-mer 16 ncRNA SNRNP25 High_conserved miR-23abc/23b-3p chr16:105281 7-mer-m8 9 ncRNA SNRNP25 High_conserved miR-24/24ab/24-3p chr16:104967 7-mer-A1 13 ncRNA SNRNP25 High_conserved miR-24/24ab/24-3p chr16:107325 7-mer-A1 16 3pUTR, ncRNA SNRNP25 High_conserved miR-26ab/1297/4465 chr16:103081 7-mer-A1 11 5pUTR SNRNP25 High_conserved miR-27abc/27a-3p chr16:103246 7-mer-A1 11 5pUTR SNRNP25 High_conserved miR-31 chr16:105223 7-mer-m8 11 ncRNA SNRNP25 High_conserved miR-103a/107/107ab chr16:103346 7-mer-A1 11 5pUTR SNRNP25 High_conserved miR-103a/107/107ab chr16:103741 7-mer-A1 2 5pUTR SNRNP25 High_conserved miR-124/124ab/506 chr16:105109 7-mer-A1 11 ncRNA SNRNP25 High_conserved miR-33a-3p/365/365-3p chr16:103072 8-mer 4 5pUTR SNRNP25 High_conserved miR-33a-3p/365/365-3p chr16:105869 7-mer-m8 38 CDS, ncRNA SNRNP25 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr16:103632 7-mer-m8 9 5pUTR SNRNP25 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr16:105149 7-mer-A1 11 ncRNA SNRNP25 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr16:106508 7-mer-m8 11 ncRNA SNRNP25 High_conserved miR-10abc/10a-5p chr16:107320 7-mer-m8 13 3pUTR, ncRNA SNRNP25 High_conserved miR-490-3p chr16:105462 8-mer 40 CDS, ncRNA SNRNP25 Medium_conserved miR-542-3p chr16:105950 7-mer-m8 13 ncRNA SNRNP25 Medium_conserved miR-542-3p chr16:106022 8-mer 11 ncRNA SNRNP25 Medium_conserved miR-542-3p chr16:106045 8-mer 2 ncRNA SNRNP25 Medium_conserved miR-758 chr16:106024 7-mer-m8 13 ncRNA SNRNP25 Medium_conserved miR-134/3118 chr16:107392 7-mer-A1 7 3pUTR, ncRNA SNRNP25 Medium_conserved miR-873 chr16:103838 7-mer-m8 11 5pUTR SNRNP25 Medium_conserved miR-874 chr16:103058 7-mer-A1 9 5pUTR SNRNP25 Medium_conserved miR-874 chr16:106510 7-mer-m8 9 ncRNA SNRNP25 Medium_conserved miR-136 chr16:105365 7-mer-m8 13 ncRNA SNRNP25 Medium_conserved miR-136 chr16:105541 7-mer-A1 51 CDS, ncRNA SNRNP25 Medium_conserved miR-149 chr16:105428 7-mer-m8 11 ncRNA SNRNP25 Medium_conserved miR-149 chr16:107327 7-mer-m8 13 3pUTR, ncRNA SNRNP25 Medium_conserved miR-296-3p chr16:107165 7-mer-m8 4 3pUTR, ncRNA SNRNP25 Medium_conserved miR-300/381/539-3p chr16:105033 7-mer-m8 13 ncRNA SNRNP25 Medium_conserved miR-320abcd/4429 chr16:103218 8-mer 11 5pUTR SNRNP25 Medium_conserved miR-326/330/330-5p chr16:105251 8-mer 9 ncRNA SNRNP25 Medium_conserved miR-326/330/330-5p chr16:105832 7-mer-A1 51 CDS, ncRNA SNRNP25 Medium_conserved miR-339b/339-5p/3586-5p chr16:103715 7-mer-m8 11 5pUTR SNRNP25 Medium_conserved miR-339b/339-5p/3586-5p chr16:107319 7-mer-m8 13 3pUTR, ncRNA SNRNP25 Medium_conserved miR-346 chr16:103387 7-mer-m8 11 5pUTR SNRNP25 Medium_conserved miR-346 chr16:107401 7-mer-m8 4 3pUTR, ncRNA SNRNP25 Medium_conserved miR-370 chr16:103277 7-mer-A1 13 5pUTR SNRNP25 Medium_conserved miR-370 chr16:105852 7-mer-A1 33 CDS, ncRNA SNRNP25 Medium_conserved miR-370 chr16:107200 8-mer 11 3pUTR, ncRNA SNRNP25 Medium_conserved miR-125a-3p/1554 chr16:106243 7-mer-m8 18 ncRNA SNRNP25 Medium_conserved miR-486-5p/3107 chr16:105332 7-mer-m8 0 ncRNA SNRNP25 Medium_conserved miR-486-5p/3107 chr16:107537 7-mer-m8 7 3pUTR SNRNP25 Medium_conserved miR-488 chr16:107342 7-mer-m8 4 3pUTR, ncRNA SNRNP25 Medium_conserved miR-495/1192 chr16:106332 7-mer-m8 2 CDS, ncRNA SNRNP25 Medium_conserved miR-496 chr16:105157 7-mer-A1 4 ncRNA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score SNRNP25 RAID00431180 hsa-miR-296-3p miRNA MIMAT0004679 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID00437536 hsa-miR-4535 miRNA MIMAT0019075 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID00511847 hsa-miR-4526 miRNA MIMAT0019065 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID00516709 hsa-miR-4316 miRNA MIMAT0016867 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID00713383 hsa-miR-346 miRNA MIMAT0000773 SNRNP25 mRNA 79622 CLIP-seq//Prediction 0.6308 SNRNP25 RAID00942275 hsa-miR-4480 miRNA MIMAT0019014 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID00970235 hsa-miR-196a-5p miRNA MIMAT0000226 SNRNP25 mRNA 79622 CLIP-seq//Prediction 0.6308 SNRNP25 RAID01423083 hsa-miR-4253 miRNA MIMAT0016882 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID01944061 hsa-miR-6882-3p miRNA MIMAT0027665 SNRNP25 mRNA 79622 CLIP-seq 0.5483 SNRNP25 RAID01944596 hsa-miR-4677-3p miRNA MIMAT0019761 SNRNP25 mRNA 79622 CLIP-seq 0.5483 SNRNP25 RAID01955746 hsa-miR-149-5p miRNA MIMAT0000450 SNRNP25 mRNA 79622 CLIP-seq//Prediction 0.6308 SNRNP25 RAID01970006 hsa-miR-216a-5p miRNA MIMAT0000273 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID01980840 hsa-miR-3660 miRNA MIMAT0018081 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID02683170 hsa-miR-665 miRNA MIMAT0004952 SNRNP25 mRNA 79622 CLIP-seq 0.5483 SNRNP25 RAID02709835 hsa-miR-3670 miRNA MIMAT0018093 SNRNP25 mRNA 79622 CLIP-seq 0.5483 SNRNP25 RAID02781158 hsa-miR-4252 miRNA MIMAT0016886 SNRNP25 mRNA 79622 CLIP-seq 0.5483 SNRNP25 RAID02930802 hsa-miR-370-3p miRNA MIMAT0000722 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID03056236 hsa-miR-488-3p miRNA MIMAT0004763 SNRNP25 mRNA 79622 CLIP-seq//Prediction 0.6308 SNRNP25 RAID03191757 hsa-let-7i-5p miRNA MIMAT0000415 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID03324946 hsa-miR-450a-2-3p miRNA MIMAT0031074 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID03807553 hsa-miR-147a miRNA MIMAT0000251 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID03994241 hsa-miR-4683 miRNA MIMAT0019768 SNRNP25 mRNA 79622 Prediction 0.1828 SNRNP25 RAID04057560 hsa-miR-486-5p miRNA MIMAT0002177 SNRNP25 mRNA 79622 Prediction 0.1828