Disease associated variation - ClinVar | Allele ID | Type | Name | RS#dbSNP | Phenotype IDs | Chromosome | Start | Stop | Reference | Alternate | 161199 | copy number gain | GRCh38/hg38 1q44(chr1:247870345-247871020)x3 | -1 | - | 1 | 248033647 | 248034322 | na | na | 161199 | copy number gain | GRCh38/hg38 1q44(chr1:247870345-247871020)x3 | -1 | - | 1 | 247870345 | 247871020 | na | na | 161199 | copy number gain | GRCh38/hg38 1q44(chr1:247870345-247871020)x3 | -1 | - | 1 | 246100270 | 246100945 | na | na | |
Disease associated variation - GWASdb | Chr | Pos | SNP ID(dbSNP 142) | Ref | Alt | Ori SNP ID | P-value | Drug Name | Drug Anno | GWAS Trait | HPO ID | DO ID | AA | Type | Trait or Drug | 1 | 248039294 | rs1339847 | G | A | rs1339847 | 1.99E-04 | | | Sensory disturbances after bilateral sagittal split ramus osteotomy | HPOID:0003401 | DOID:1491|DOID:0050155 | G | missense | GWASdb_trait | 1 | 248039451 | rs3811444 | C | T | rs3811444 | 6.00E-09 | | | Platelet counts | HPOID:0011873 | DOID:74|DOID:526|DOID:3393 | C | missense | GWASdb_trait | 1 | 248039451 | rs3811444 | C | T | rs3811444 | 5.00E-10 | | | Red blood cell traits | HPOID:0001877 | DOID:74 | C | missense | GWASdb_trait | 1 | 248040104 | rs4925753 | C | T | rs4925753 | 5.36E-05 | | | Hypertension | HPOID:0000822 | DOID:10763 | C | UTR-3 | GWASdb_trait | |
Disease associated variation - GWAS Central | Study Name | Source Marker Accession | Chromosome | Marker Start | Marker Stop | Alleles | Gene Section | P-value | -log(p-value) | GWAS of prostate cancer | rs6657427 | 1 | 248032168 | 248032168 | | intronic | 0.968621 | 0.0138461195500049 | GWAS of prostate cancer | rs3737277 | 1 | 248023966 | 248023966 | | exonic | 0.405567 | 0.391937389722441 | GWAS of prostate cancer | rs1339847 | 1 | 248039294 | 248039294 | | exonic | 0.301581 | 0.5205960230644701 | GWAS of prostate cancer | rs3811444 | 1 | 248039451 | 248039451 | | exonic | 0.24365 | 0.6132335842826859 | GWAS of prostate cancer | rs3811445 | 1 | 248039713 | 248039713 | | exonic | 0.161167 | 0.792723878070998 | |