iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs1453278	snp	A/G			upstream-variant-2KB, nc-transcript-variant	LRR1, LOC100288910	GRCh38.p7	14:49597688	AGACGGGGTCACTCA[A/G]GCTGGAGTGCCAGTG	122769
rs1957978	snp	A/G			intron-variant, upstream-variant-2KB	LRR1, LOC100288910	GRCh38.p7	14:49601122	TACATTCTCTCCTCA[A/G]GTATGGCCCATCTCC	122769
rs2274214	snp	C/G	0	0	intron-variant	LRR1	GRCh38.p7	14:49603390	GACCTGTGCAGTTGC[C/G]TTATAGAGTTCCAGT	122769
rs2281836	snp	C/G	0.433584	0.169697	utr-variant-5-prime, nc-transcript-variant	LRR1, LOC100288910	GRCh38.p7	14:49598999	CAACGGCCACAACCA[C/G]GTCAAGCTGGCTTTG	122769
rs2281837	snp	C/G	0.483135	0.0902654	upstream-variant-2KB, nc-transcript-variant	LRR1, LOC100288910	GRCh38.p7	14:49598641	CGCTTTACGCGTTGC[C/G]GGCGCACGTCGGGCC	122769
rs2354444	snp	A/T	0.480618	0.0965156	intron-variant	LRR1	GRCh38.p7	14:49602564	CAAGCTGAAGTACAG[A/T]GGCATAGTCATAGCT	122769
rs2354445	snp	G/T	0.473174	0.112665	intron-variant	LRR1	GRCh38.p7	14:49607296	TTTCAGTAAATCATT[G/T]TATCACATTCATAAG	122769
rs2354446	snp	A/T	0.424659	0.17887	intron-variant	LRR1	GRCh38.p7	14:49609081	aacacgcctggctaa[A/T]tttttttttgtattt	122769
rs2883439	snp	A/C/G	0.000798403	0.0199641	intron-variant	LRR1	GRCh38.p7	14:49608975	gtgcagtggtgcgaa[A/C/G]ggatctcggctcact	122769
rs2883441	snp	C/T			intron-variant	LRR1	GRCh38.p7	14:49608997	cggctcactgcaagc[C/T]ccgccttccaggttc	122769
rs2883442	snp	A/G	0.304937	0.243889	downstream-variant-500B	LRR1	GRCh38.p7	14:49615117	ctcactgcaacctcc[A/G]cctcagcctcctgag	122769
rs4127814	snp	A/G	0.472989	0.113031	intron-variant, upstream-variant-2KB	LRR1, LOC100288910	GRCh38.p7	14:49600887	GTTACAACATGATGT[A/G]ATTGTAGCTTTTTAA	122769
rs4353404	snp	C/T	0.00597247	0.0543191	intron-variant	LRR1	GRCh38.p7	14:49609995	TTACAGGTGTGAGCC[C/T]CTCAAAGTGCTGGGA	122769
rs4390492	snp	C/T	0.231482	0.249313	downstream-variant-500B	LRR1	GRCh38.p7	14:49615116	gctcactgcaacctc[C/T]acctcagcctcctga	122769
rs4900939	snp	A/G	0.241914	0.249869	upstream-variant-2KB	LRR1	GRCh38.p7	14:49597135	gccaggctggtctcc[A/G]actcccgacctcagg	122769
rs4900940	snp	A/C	0.489201	0.0726845	intron-variant	LRR1	GRCh38.p7	14:49608592	atctaaaccatgtat[A/C]ccctgctcctagcat	122769
rs4900941	snp	C/T	0.489259	0.0724914	intron-variant	LRR1	GRCh38.p7	14:49610410	AGGCTCCCGCCACCA[C/T]GGCTGGCTATTTTTT	122769
rs4900942	snp	C/G	0.283947	0.247685	intron-variant	LRR1	GRCh38.p7	14:49611423	gaggttgcagtgagc[C/G]gagatggcaccactg	122769
rs6572590	snp	C/G	0.489318	0.0722982	intron-variant	LRR1	GRCh38.p7	14:49601960	CAACATGATGAAACC[C/G]TGTTTCTACTAAAAA	122769
rs6572592	snp	A/G	0.48978	0.0707512	intron-variant	LRR1	GRCh38.p7	14:49614153	TTAAATATACTAATC[A/G]CTTAATAATTTTACT	122769
rs7143010	snp	C/T	0.486133	0.082104	downstream-variant-500B	LRR1	GRCh38.p7	14:49615085	TCCCAGGCTGGAGTG[C/T]AGTGGCGCAATCTCG	122769
rs7144598	snp	C/T	0	0	intron-variant	LRR1	GRCh38.p7	14:49603405	GGCAACTGCACAGGT[C/T]TACATTTTGCCAGCT	122769
rs7144985	snp	A/T			intron-variant	LRR1	GRCh38.p7	14:49603709	ttttttttttttttt[A/T]atgagacagagtctc	122769
rs7144987	snp	A/T			intron-variant	LRR1	GRCh38.p7	14:49603710	tttttttttttttta[A/T]tgagacagagtctct	122769
rs7145333	snp	A/G	0.473634	0.111748	intron-variant	LRR1	GRCh38.p7	14:49603868	cagctaattttttgt[A/G]tctttagtagagacg	122769
rs7146063	snp	C/T	0.277778	0.248452	intron-variant	LRR1	GRCh38.p7	14:49603526	TTTCTTCTtcttctt[C/T]ttttttttttttttt	122769
rs7146398	snp	C/T	0.490987	0.0665243	intron-variant	LRR1	GRCh38.p7	14:49603666	TACTGTGCCTGGCCC[C/T]TACTGTAATCATTCC	122769
rs7148147	snp	C/T	0.311185	0.242397	missense, intron-variant, nc-transcript-variant	LRR1	GRCh38.p7	14:49607802	CTCCAGAAGTCACTT[C/T]GGAGTTTGGACCTCA	122769
rs7149422	snp	A/G			intron-variant	LRR1	GRCh38.p7	14:49602643	ctaaaggtgtacctc[A/G]ccactcccggataaa	122769
rs7150505	snp	C/T	0.480539	0.0967035	intron-variant	LRR1	GRCh38.p7	14:49603087	tgaactcaggcgatc[C/T]acccacctcagcctt	122769
rs7151032	snp	G/T	0.473818	0.111381	intron-variant	LRR1	GRCh38.p7	14:49603212	AGCCGAATAGGGACA[G/T]ACTCTTGCAGGTTTT	122769
rs7160061	snp	A/G	0.0984431	0.198823	intron-variant	LRR1	GRCh38.p7	14:49601205	ATATTTCTATATTAA[A/G]GCTTAATGTGCTTTC	122769
rs7161649	snp	A/G	0.49753	0.0350569	upstream-variant-2KB, downstream-variant-500B	LRR1, LOC100288910	GRCh38.p7	14:49597310	GATCCTCCTGCCTCG[A/G]GCCTCCCAAATTGTT	122769
rs8014170	snp	C/G	0.489376	0.0721049	intron-variant	LRR1	GRCh38.p7	14:49604976	TCACAGCTCACTGCA[C/G]CCTCGACCTTCCAGG	122769
rs8015132	snp	C/T	0.226779	0.248919	intron-variant, upstream-variant-2KB	LRR1, LOC100288910	GRCh38.p7	14:49599598	CAGTGAATTCTTTCT[C/T]CCACAATATTCTCCC	122769
rs10150146	snp	A/T			intron-variant, nc-transcript-variant	LRR1	GRCh38.p7	14:49612533	CCTGGCAGAGTTTTT[A/T]AAAAAATGGTTACTT	122769
rs10601239	snp	G/T	0	0	intron-variant	LRR1	GRCh38.p7	14:49603548	ttttttttttttttt[G/T]gagatggagtctcat	122769
rs11294951	in-del	-/T	0.353371	0.227628	upstream-variant-2KB	LRR1	GRCh38.p7	14:49596919	AATTTTTTCTTCTTC[-/T]TTTTTTTTTTTTTTT	122769
rs11319854	in-del	-/A			intron-variant	LRR1	GRCh38.p7	14:49601839	AAAAAAAAAAAAAAA[-/A]CTTTAAAACTTGGCC	122769
rs11552668	snp	C/T	0	0	missense, nc-transcript-variant	LRR1, LOC100288910	GRCh38.p7	14:49599106	AGGGCGTCCGAGCCG[C/T]GTTGAGCCTCTGTCA	122769
rs11621247	snp	A/T	0.444444	0.157135	intron-variant	LRR1	GRCh38.p7	14:49606656	AAACTCAAAtttttt[A/T]tttttttttttaatt	122769
rs11625804	snp	C/G	0.499999	0.000817527	intron-variant, nc-transcript-variant	LRR1	GRCh38.p7	14:49601581	GACAAGATTCCTGCT[C/G]TCATGGAGTTTGTAT	122769
rs12434697	snp	G/T	0.268724	0.249298	intron-variant	LRR1	GRCh38.p7	14:49606388	gtgtcgcccaggctg[G/T]agtgcagtggcgcga	122769
rs12435674	snp	C/T	0.305436	0.243776	intron-variant	LRR1	GRCh38.p7	14:49608175	AGCATTCTAATATTC[C/T]TATCAAACTCAGAGT	122769
rs12587902	snp	G/T			intron-variant	LRR1	GRCh38.p7	14:49608789	agtgagtcttccaag[G/T]gattttgatgtactc	122769
rs12588056	snp	A/C			intron-variant	LRR1	GRCh38.p7	14:49612779	ctagagactagagaa[A/C]caacaaagaacaaga	122769
rs12883361	snp	A/C	0	0	intron-variant	LRR1	GRCh38.p7	14:49604088	ctggtggatcacttg[A/C]tctcaggagttcaag	122769
rs12884574	snp	A/G	0.162382	0.234143	utr-variant-5-prime, nc-transcript-variant	LRR1, LOC100288910	GRCh38.p7	14:49598726	GCTGCGCGCTCGGGG[A/G]AAAAGACGTTGCGCC	122769
rs12889586	snp	C/T	0.305436	0.243776	intron-variant	LRR1	GRCh38.p7	14:49611878	gtagtgagctgagat[C/T]gtagcaccacactac	122769
rs12891548	snp	A/C/G	0.305436	0.243776	intron-variant	LRR1	GRCh38.p7	14:49609036	ctcgtgcctcagcct[A/C/G]ctgagtagctgggac	122769
rs12891872	snp	C/T	0.239902	0.249796	intron-variant	LRR1	GRCh38.p7	14:49609142	caggatggtctcgat[C/T]tcctgacctcgtgat	122769
rs12892781	snp	C/T			intron-variant	LRR1	GRCh38.p7	14:49613360	aaaaaaaaaaattag[C/T]cgggaatgttggcgt	122769
rs12893082	snp	C/G			intron-variant	LRR1	GRCh38.p7	14:49613420	tgaggcaggagaata[C/G]cttgaaccctggagg	122769
rs12893221	snp	C/T			intron-variant	LRR1	GRCh38.p7	14:49609230	ccCtttttttttttt[C/T]tttttttttttttga	122769
rs12893247	snp	G/T			intron-variant	LRR1	GRCh38.p7	14:49613468	tgagattgcaccact[G/T]cactccagtctgggc	122769
rs12894048	snp	C/T			intron-variant	LRR1	GRCh38.p7	14:49613418	gctgaggcaggagaa[C/T]agcttgaaccctgga	122769
rs12896413	snp	C/T	0.261608	0.24973	intron-variant	LRR1	GRCh38.p7	14:49609507	cttcccgagttcgag[C/T]gattctcctgcttca	122769
rs17121605	snp	A/T	0.331071	0.23649	missense, intron-variant, nc-transcript-variant	LRR1	GRCh38.p7	14:49607404	TATTTATTCAGGCCA[A/T]TTCCAGCAGTTTAAA	122769
rs28396798	snp	C/T	0.473543	0.111932	intron-variant	LRR1	GRCh38.p7	14:49608601	ATGTATACCCTGCTC[C/T]TAGCATATATTAAGC	122769
rs28405032	snp	A/T	0.471292	0.116318	intron-variant, upstream-variant-2KB	LRR1, LOC100288910	GRCh38.p7	14:49600078	TGCCTACTCATGAGC[A/T]GTGCCAACGACGCCT	122769
rs28529834	snp	A/C			intron-variant	LRR1	GRCh38.p7	14:49608486	ATATATATTTTTAAA[A/C]TTTTTTTTTTGTTTA	122769
rs28564165	snp	A/G	0.0744748	0.178019	upstream-variant-2KB	LRR1	GRCh38.p7	14:49596901	GCGCCGCCCCGCCCA[A/G]CTAATTTTTTCTTCT	122769
rs28567068	snp	A/T			intron-variant	LRR1	GRCh38.p7	14:49606667	TTTTTTTTTTTTTTT[A/T]AATTTTTCAGATAGA	122769
rs28607830	snp	A/G	0.0023933	0.0345097	intron-variant	LRR1	GRCh38.p7	14:49613535	GTTTAGGCCAGGTGC[A/G]GTGGCTCACACCTTT	122769
rs28643334	snp	C/G	0.463774	0.129618	upstream-variant-2KB, nc-transcript-variant	LRR1, LOC100288910	GRCh38.p7	14:49598244	CGACCGTGAGCGCCT[C/G]CTTAACATTTGCTCC	122769
rs28729752	snp	C/T			intron-variant	LRR1	GRCh38.p7	14:49608487	TATATATTTTTAAAC[C/T]TTTTTTTTTGTTTAC	122769
rs33978825	in-del	-/G			intron-variant	LRR1	GRCh38.p7	14:49603227	ACTCTTGCAGGTTTT[-/G]TTGAAGAGGCAATGG	122769
rs34024087	in-del	-/T			intron-variant	LRR1	GRCh38.p7	14:49603003	CCATGCGTGGCTGAT[-/T]TTTTTTTTTTTTTTT	122769
rs34137173	snp	C/T	0.283947	0.247685	intron-variant	LRR1	GRCh38.p7	14:49609863	AAGCATGTGCCACCA[C/T]ACACAGCTAATTTTT	122769
rs34224175	in-del	-/T/TG/TT/TTG			upstream-variant-2KB, nc-transcript-variant	LRR1, LOC100288910	GRCh38.p7	14:49597671	TTCTTTTTTTTTTTT[-/T/TG/TT/TTG]GAGACGGGGTCACTC	122769
rs34320574	snp	G/T	0.255224	0.249945	intron-variant	LRR1	GRCh38.p7	14:49605646	TTACCTTCAGTTTTC[G/T]TAGTCACTTCTTTGT	122769
rs34391221	in-del	-/C			intron-variant	LRR1	GRCh38.p7	14:49609635	CTGGTCTTGAACTCC[-/C]TGACCTTGTGATCTG	122769
rs34448665	snp	G/T			intron-variant	LRR1	GRCh38.p7	14:49608663	TTGTTTCTCAAAGTG[G/T]GCTCCCCTGACCAGC	122769
rs34457930	in-del	-/T			intron-variant	LRR1	GRCh38.p7	14:49608926	TTTTTTTTTTTTTTT[-/T]GAGATGGAGTCTCAC	122769
rs34495950	snp	A/G	0.283947	0.247685	intron-variant	LRR1	GRCh38.p7	14:49609781	CATGATCTCGGCTCA[A/G]CTATAACCTCTGCCT	122769
rs34581570	in-del	-/C			intron-variant	LRR1	GRCh38.p7	14:49605298	TGTCCCATCTCCTCC[-/C]TTGTGATTTTTCATT	122769
rs34871608	in-del	-/C			intron-variant	LRR1	GRCh38.p7	14:49604474	GAGCCCTAGTTGGGC[-/C]GGATTGCTTGAATCC	122769
rs34947556	snp	C/T	0.00846451	0.0645028	missense, intron-variant, nc-transcript-variant	LRR1	GRCh38.p7	14:49607523	TGATAACCATTTTAG[C/T]TTTAAAGTTTTCAAA	122769
rs35115268	snp	A/G	0.268724	0.249298	intron-variant	LRR1	GRCh38.p7	14:49603943	TGATCCGCCCACCTT[A/G]GCCGCCCAAAGTGCT	122769
rs35174395	snp	A/G	0.00465424	0.0480152	synonymous-codon, intron-variant, nc-transcript-variant	LRR1	GRCh38.p7	14:49607643	TCCTAAGGCTTTTTA[A/G]GCAAAGCATACGCAT	122769
rs35484885	in-del	-/A			upstream-variant-2KB	LRR1	GRCh38.p7	14:49597051	CCCGGGTAGCTGGGA[-/A]CTACAGGTGCGCGCC	122769
rs35726560	in-del	-/TT	0.469544	0.119585	upstream-variant-2KB	LRR1	GRCh38.p7	14:49596779	GACTGAGATTGAGGC[-/TT]TTTTTTTTTTTTTTT	122769
rs35839847	multinucleotide-polymorphism	CA/TG	0.5	0	intron-variant	LRR1	GRCh38.p7	14:49611016	CCAAAGTTAAGGAAC[CA/TG]GAAAACTGTACACAT	122769
rs35943647	snp	G/T			intron-variant	LRR1	GRCh38.p7	14:49614177	TTTTACTTTTCATTG[G/T]TAAAATTCCATGTCC	122769
rs36041947	in-del	-/GA	0	0	intron-variant	LRR1	GRCh38.p7	14:49610750	TGTATTTTTAGTAGA[-/GA]CAGGGTTTCACTATG	122769
rs45489097	snp	G/T	0.0426798	0.139708	upstream-variant-2KB, nc-transcript-variant	LRR1, LOC100288910	GRCh38.p7	14:49598614	CACACCTGCCTTCCC[G/T]CGGGAAACAGCGGCC	122769
rs45595136	snp	A/C	0.0231138	0.104989	utr-variant-3-prime, nc-transcript-variant	LRR1	GRCh38.p7	14:49614503	TTAAAGTAATGGGTG[A/C]GACCAGAAAAAGAAA	122769
rs55670673	snp	A/G	0.283947	0.247685	intron-variant	LRR1	GRCh38.p7	14:49611017	CAAAGTTAAGGAACT[A/G]GAAAACTGTACACAT	122769
rs55728326	snp	A/G	0.254664	0.249956	intron-variant	LRR1	GRCh38.p7	14:49611145	AACCAATGGTTCTCA[A/G]ACGTTACTTCAAATT	122769
rs55841790	snp	A/G			intron-variant, upstream-variant-2KB	LRR1, LOC100288910	GRCh38.p7	14:49600130	CCGTCTTCGACCACT[A/G]CACAGTCAGCGTCAC	122769
rs55969936	in-del	-/C/G	0.501332	0.083417	intron-variant	LRR1	GRCh38.p7	14:49603226	GACTCTTGCAGGTTT[-/C/G]TTTGAAGAGGCAATG	122769
rs56059222	in-del	-/TT			intron-variant	LRR1	GRCh38.p7	14:49608925	TTTTTTTTTTTTTTT[-/TT]GAGATGGAGTCTCAC	122769
rs56203410	snp	C/T	4.42468e-05	0.00470334	utr-variant-5-prime, nc-transcript-variant	LRR1, LOC100288910	GRCh38.p7	14:49598983	GGGAAGGAGGAAGTT[C/T]CAAAGCCAGCTTGAC	122769
rs56388169	snp	A/G			intron-variant	LRR1	GRCh38.p7	14:49601188	GCACAAGTGTAACCT[A/G]AATATTTCTATATTA	122769
rs57012174	in-del	-/T	0.5	0	intron-variant	LRR1	GRCh38.p7	14:49606021	CCAACAAAAATTAGC[-/T]TTTTTTTTTTTCTTT	122769
rs57178302	snp	C/T	0.305436	0.243776	intron-variant	LRR1	GRCh38.p7	14:49611016	CCAAAGTTAAGGAAC[C/T]GGAAAACTGTACACA	122769
rs58159657	in-del	-/T	0.495708	0.0461266	intron-variant	LRR1	GRCh38.p7	14:49606650	GGCCTTAAACTCAAA[-/T]TTTTTTTTTTTTTTT	122769
rs58731951	in-del	-/T			intron-variant	LRR1	GRCh38.p7	14:49607050	TTTTTTTTTTTTTTT[-/T]GAGACAGTCTCACTC	122769
rs59173612	in-del	-/CTTTTTTTTT	0	0	intron-variant	LRR1	GRCh38.p7	14:49609239	TTTTTTTTTTTTTTT[-/CTTTTTTTTT]TTTTGAGACAGGGTC	122769
rs60910708	snp	A/T			intron-variant	LRR1	GRCh38.p7	14:49601464	TTAATTTTTTTTAAA[A/T]TTTAAATATGCCATT	122769

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