PTM - CPLM Gene Name UniProt ID Type Position Code USP54; C10orf29 Q70EL1 Ubiquitination 203 K USP54; C10orf29 Q70EL1 Ubiquitination 92 K USP54; C10orf29 Q70EL1 Ubiquitination 1236 K USP54; C10orf29 Q70EL1 Ubiquitination 105 K USP54; C10orf29 Q70EL1 Ubiquitination 1521 K USP54; C10orf29 Q70EL1 Ubiquitination 331 K USP54; C10orf29 Q70EL1 Ubiquitination 1246 K USP54; C10orf29 Q70EL1 Ubiquitination 324 K

PTM - dbPAF Gene Name UniProt ID Position Type Species USP54; C10orf29 Q70EL1 1036 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1056 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1058 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1060 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1069 Y Homo sapiens(Human) USP54; C10orf29 Q70EL1 1143 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1156 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1163 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1164 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1198 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1233 Y Homo sapiens(Human) USP54; C10orf29 Q70EL1 1250 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1256 T Homo sapiens(Human) USP54; C10orf29 Q70EL1 1285 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1286 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1352 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1362 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1398 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1420 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1422 T Homo sapiens(Human) USP54; C10orf29 Q70EL1 1529 Y Homo sapiens(Human) USP54; C10orf29 Q70EL1 1531 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 1568 Y Homo sapiens(Human) USP54; C10orf29 Q70EL1 374 T Homo sapiens(Human) USP54; C10orf29 Q70EL1 376 Y Homo sapiens(Human) USP54; C10orf29 Q70EL1 378 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 381 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 388 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 389 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 442 T Homo sapiens(Human) USP54; C10orf29 Q70EL1 451 T Homo sapiens(Human) USP54; C10orf29 Q70EL1 452 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 456 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 481 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 564 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 603 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 632 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 635 Y Homo sapiens(Human) USP54; C10orf29 Q70EL1 660 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 662 Y Homo sapiens(Human) USP54; C10orf29 Q70EL1 669 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 670 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 671 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 682 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 690 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 7 Y Homo sapiens(Human) USP54; C10orf29 Q70EL1 854 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 958 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 985 S Homo sapiens(Human) USP54; C10orf29 Q70EL1 988 S Homo sapiens(Human)

PTM - PhosphositePlus UniProt ID MOD_RSD Type SITE_+/-7_AA Q70EL1 R12-m1 Methylation RNyFSGGrGsVQGMF Q70EL1 R533-m1 Methylation TNVGSHCrGrGGDQP Q70EL1 R535-m1 Methylation VGSHCrGrGGDQPDk Q70EL1 K542-m1 Methylation rGGDQPDkKPPRTLP Q70EL1 R653-m1 Methylation HLLEQHPrLIQRMEs Q70EL1 Y7-p Phosphorylation _MSWKRNyFSGGrGs Q70EL1 S14-p Phosphorylation yFSGGrGsVQGMFAP Q70EL1 S23-p Phosphorylation QGMFAPRssTSIAPS Q70EL1 S24-p Phosphorylation GMFAPRssTSIAPSK Q70EL1 T374-p Phosphorylation EFQSYSRtCyDsEDs Q70EL1 Y376-p Phosphorylation QSYSRtCyDsEDsGR Q70EL1 S378-p Phosphorylation YSRtCyDsEDsGREP Q70EL1 S381-p Phosphorylation tCyDsEDsGREPSIs Q70EL1 S388-p Phosphorylation sGREPSIssDTRTDS Q70EL1 S389-p Phosphorylation GREPSIssDTRTDSS Q70EL1 T442-p Phosphorylation SRDTGHLtDSECNQK Q70EL1 T451-p Phosphorylation SECNQKHtsKKGsLI Q70EL1 S452-p Phosphorylation ECNQKHtsKKGsLIE Q70EL1 S456-p Phosphorylation KHtsKKGsLIERKRS Q70EL1 S481-p Phosphorylation PQASGYHsEGETLKE Q70EL1 Y572-p Phosphorylation KSSSSSKyRPtWRPK Q70EL1 T575-p Phosphorylation SSSKyRPtWRPKREs Q70EL1 S582-p Phosphorylation tWRPKREsLNIDSIF Q70EL1 S603-p Phosphorylation HCGYTQLsPFSEDSA Q70EL1 S632-p Phosphorylation DIKFGGPsPQyKRWG Q70EL1 Y635-p Phosphorylation FGGPsPQyKRWGPAR Q70EL1 S660-p Phosphorylation rLIQRMEsGyESSER Q70EL1 Y662-p Phosphorylation IQRMEsGyESSERNS Q70EL1 S671-p Phosphorylation SSERNSSsPVsLDAA Q70EL1 S674-p Phosphorylation RNSSsPVsLDAALPE Q70EL1 S682-p Phosphorylation LDAALPEsSNVYRDP Q70EL1 S690-p Phosphorylation SNVYRDPsAKRSAGL Q70EL1 S854-p Phosphorylation VDKKLQIsIRKARSL Q70EL1 S958-p Phosphorylation SALKLLTsVEVDNIE Q70EL1 S988-p Phosphorylation TEKNSHHsWEPLDAP Q70EL1 S1036-p Phosphorylation KKDPANPsPVMPGIA Q70EL1 S1056-p Phosphorylation DEHSLGCsPSNSSAQ Q70EL1 Y1069-p Phosphorylation AQPSLPLyRTCHPIM Q70EL1 S1143-p Phosphorylation FQRMQGVsMRDSTGF Q70EL1 S1156-p Phosphorylation GFKDRSLsGSLRKNs Q70EL1 S1163-p Phosphorylation sGSLRKNssPSDSKP Q70EL1 S1164-p Phosphorylation GSLRKNssPSDSKPP Q70EL1 Y1233-p Phosphorylation RLAEPDIyQEkLSQV Q70EL1 S1352-p Phosphorylation HPLSQTGsADGMGRR Q70EL1 S1362-p Phosphorylation GMGRRLHsAHDPGLS Q70EL1 S1408-p Phosphorylation CGEDEQYsAENLRRI Q70EL1 S1420-p Phosphorylation RRISRSLsGTVVSER Q70EL1 Y1529-p Phosphorylation YTGRTLNyQsLPHRS Q70EL1 S1531-p Phosphorylation GRTLNyQsLPHRSRT Q70EL1 Y1568-p Phosphorylation GCNPQLTyTATLPER Q70EL1 K105-ub Ubiquitination TLRSALAkTFQDEQR Q70EL1 K769-ub Ubiquitination EKELEAAkGFNPHPS Q70EL1 K1236-ub Ubiquitination EPDIyQEkLSQVRDV Q70EL1 K1246-ub Ubiquitination QVRDVRSkDLGSSTD Q70EL1 K1521-ub Ubiquitination GETSQGAkYTGRTLN

PTM - dbPTM UniProt ID Position Code Type Resources References Q70EL1 481 S Phosphorylation HPRD 9.0 19651622 Q70EL1 671 S Phosphorylation HPRD 9.0 18669648

PTM - HPRD Symbol Position Code Type References USP54 481 S Phosphorylation 19651622 USP54 671 S Phosphorylation 18669648

PTM - UniProt UniProt ID Position Type PMIDs Q70EL1 603 Phosphoserine 23186163 Q70EL1 632 Phosphoserine 23186163 Q70EL1 671 Phosphoserine 18669648

PTM - BioGRID Entrez Gene BioGRID ID Position Code Type PMIDs 159195 127739 - K Ubiquitination 22118674 159195 127739 - K Ubiquitination 21139048 159195 127739 - K Ubiquitination 21906983

PTM - mUbiSiDa Gene Name Species Ubiquitination Site Ubiquitination Sequence Evidence PMID USP54 Homo sapiens (Human) 428; 418; 656 "428,VRDVRSKDLGSST; 418,PDIYQEKLSQVRD; 656,ETSQGAKYTGRTL" 428:21906983; 418:21906983; 656:21906983 USP54 Homo sapiens (Human) 105 "105,LRSALAKTFQDEQ" 105:21906983 USP54 Homo sapiens (Human) 324; 609; 334 "324,PDIYQEKLSQVRD; 609,ETSQGAKYTGRTL; 334,VRDVRSKDLGSST" 324:21906983; 609:21906983; 334:21906983 USP54 Homo sapiens (Human) 1096; 1371; 1086; 105 "1096,VRDVRSKDLGSST; 1371,ETSQGAKYTGRTL; 1086,PDIYQEKLSQVRD; 105,LRSALAKTFQDEQ" 1096:21906983; 1371:21906983; 1086:21906983; 105:21906983 USP54 Homo sapiens (Human) 1236; 1521; 1246; 105 "1236,PDIYQEKLSQVRD; 1521,ETSQGAKYTGRTL; 1246,VRDVRSKDLGSST; 105,LRSALAKTFQDEQ" 1236:21906983; 1521:21906983; 1246:21906983; 105:21906983 USP54 Homo sapiens (Human) 105 "105,LRSALAKTFQDEQ" 105:21906983 USP54 Homo sapiens (Human) 324; 334; 604 "324,PDIYQEKLSQVRD; 334,VRDVRSKDLGSST; 604,ETSQGAKYTGRTL" 324:21906983; 334:21906983; 604:21906983