iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs594617	snp	A/G			intron-variant	USP54	GRCh38.p7	10:73528458	agatggggtttcacc[A/G]tgtaggccaggatgg	159195
rs1007496	snp	A/C	0	0	intron-variant	USP54	GRCh38.p7	10:73585373	gctggtgccatgctt[A/C]ccatacacagtgcag	159195
rs1538772	snp	C/G	0.106278	0.204558	intron-variant	USP54	GRCh38.p7	10:73555465	CTCTATTTTGCATAG[C/G]TGGTAGCAGGAATGA	159195
rs1618542	snp	C/T	0	0	missense, nc-transcript-variant	USP54	GRCh38.p7	10:73517500	TCCACCCTGGTGCTT[C/T]AGGTAAACCTTGCCT	159195
rs1724076	snp	A/G	0	0	intron-variant	USP54	GRCh38.p7	10:73523092	GGCAGTTGTGGAAGT[A/G]AAGTCCATGCAAATT	159195
rs1880700	snp	C/T	0.375	0.216506	intron-variant	USP54	GRCh38.p7	10:73538494	TCTCCTTTTTTTTTT[C/T]CTAGAAAATAGTTTT	159195
rs1880701	snp	C/T	0.224116	0.248656	intron-variant, upstream-variant-2KB	USP54	GRCh38.p7	10:73553474	TCCAGTCCCTGTGCT[C/T]ATGTGAGAGGGACAC	159195
rs1917887	snp	A/G	0.00119737	0.0244387	intron-variant	USP54	GRCh38.p7	10:73591256	ATTGTAGTTGTTGTG[A/G]TAAAAACAGATAGAT	159195
rs2005519	snp	A/T	0	0	intron-variant	USP54	GRCh38.p7	10:73539309	CATATATATATATAt[A/T]tttttttttttttta	159195
rs2140933	snp	G/T	0.365853	0.221536	intron-variant	USP54	GRCh38.p7	10:73573434	AGGCTTGCCAGCACA[G/T]AATTTTTTTTTATTG	159195
rs2140934	snp	G/T	0	0	upstream-variant-2KB, intron-variant	USP54	GRCh38.p7	10:73592978	GTGGTTGATACAGGG[G/T]TCTCTTTCTATTTGG	159195
rs2140935	snp	C/T	0.172351	0.237636	intron-variant	USP54	GRCh38.p7	10:73584940	GCAATGAGTCAGTAA[C/T]GTGGTGCAGTGGTCC	159195
rs2395052	snp	A/G	0.0322114	0.122752	intron-variant	USP54	GRCh38.p7	10:73583418	ggcgcctgtaatccc[A/G]gctactccagaggct	159195
rs2990138	snp	C/T			utr-variant-3-prime, intron-variant, nc-transcript-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73498563	gcaggtgtgagccac[C/T]gtgcccggccCACAG	159195
rs2990139	snp	C/T	0.000798403	0.0199641	utr-variant-3-prime, intron-variant, nc-transcript-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73498565	aggtgtgagccactg[C/T]gcccggccCACAGTA	159195
rs3087937	snp	G/T	0	0	intron-variant	USP54	GRCh38.p7	10:73584722	ATTTTTAGGGAAAAT[G/T]TGTTTAAACCCCTAT	159195
rs3793663	snp	C/T	0.229723	0.249176	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73500425	GGTCATTTTCGTAAG[C/T]AGACAGACTCTAGGG	159195
rs4359123	snp	C/T	0	0	intron-variant, synonymous-codon, nc-transcript-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73505308	ACCTGAGGCTGCTAC[C/T]TGAGAAGTACGCACT	159195
rs4412682	snp	C/T	0.00778198	0.0618905	intron-variant, nc-transcript-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73505107	AGTAGTAATAGACAC[C/T]TGAATTAGATGTATT	159195
rs4412683	snp	C/G/T	6.72766e-05	0.00579946	intron-variant, nc-transcript-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73505287	CCCCAGGCCCAGCAC[C/G/T]TTAGCACCTGAGGCT	159195
rs4497323	snp	A/C	0.124837	0.216412	intron-variant, upstream-variant-2KB	USP54	GRCh38.p7	10:73579782	caacaacaacaacaa[A/C]aaaaaactacccaat	159195
rs4619071	snp	C/T	0.00205729	0.0320064	missense, nc-transcript-variant	USP54	GRCh38.p7	10:73516735	TCTCTTGGTATATGT[C/T]TGGCTCTGCCAACCT	159195
rs4745717	snp	A/G	0.357664	0.225629	intron-variant	USP54	GRCh38.p7	10:73546027	CACGTAAACGTTATC[A/G]ACAAATTATTTTCTG	159195
rs4746136	snp	A/G	0.39121	0.2063	intron-variant	USP54	GRCh38.p7	10:73541236	CAAGCACGGGTATCT[A/G]TACACAAATAAGTTT	159195
rs5786111	in-del	-/T			intron-variant	USP54	GRCh38.p7	10:73523880	TTTATTTATTTATTA[-/T]TTATTATTATTATTA	159195
rs5786112	in-del	-/A			intron-variant	USP54	GRCh38.p7	10:73523886	TTATTTATTATTATT[-/A]TTATTATTATTATTA	159195
rs7068363	snp	A/G	0.101301	0.200969	intron-variant	USP54	GRCh38.p7	10:73562124	aaagagagagagaga[A/G]aaaaaaaTTACAATC	159195
rs7069592	snp	C/T	0.211516	0.24702	intron-variant	USP54	GRCh38.p7	10:73584053	TTGGGAAATAAATAT[C/T]TATATGTCTAAAGGT	159195
rs7070021	snp	A/C			intron-variant, upstream-variant-2KB	USP54	GRCh38.p7	10:73580319	gaaagaccccatttc[A/C]aaaaaaaaaaaaaaa	159195
rs7070431	snp	A/G	0.102014	0.201495	intron-variant	USP54	GRCh38.p7	10:73587863	atgatgaAGAATAAG[A/G]TGAATCTACATTCCA	159195
rs7070516	snp	C/T	0.211212	0.246973	intron-variant	USP54	GRCh38.p7	10:73587772	AAAATAATGTAGATA[C/T]GTATAATTAGCCCAG	159195
rs7073014	snp	A/G	0.356169	0.226336	intron-variant	USP54	GRCh38.p7	10:73533163	tacaaaaaattagcc[A/G]ggcgtggtggcgggc	159195
rs7073027	snp	A/T	0.365439	0.221752	intron-variant	USP54	GRCh38.p7	10:73584083	TAGATGGACCAAGAT[A/T]GATTTATAGGAAAAG	159195
rs7073223	snp	G/T	0.0836354	0.186609	intron-variant	USP54	GRCh38.p7	10:73563130	ataatttttaaaaat[G/T]ttttcgtagagacag	159195
rs7073477	snp	C/T	0.105924	0.204309	intron-variant	USP54	GRCh38.p7	10:73584416	AGACGTTGACGTAGT[C/T]TGTGATCCTACAATC	159195
rs7074504	snp	A/C	0.393619	0.204631	intron-variant	USP54	GRCh38.p7	10:73528241	gcctggccCACTAAT[A/C]CAttctttttttgtt	159195
rs7075971	snp	A/G			intron-variant	USP54	GRCh38.p7	10:73581966	TGAAATACAGAGAAT[A/G]ATTCTTTCACAAGTA	159195
rs7077046	snp	A/T	0.0948562	0.196037	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73507483	ttcgagaccagcctg[A/T]ccaacatggtgaaaa	159195
rs7078133	snp	C/T	0.0905309	0.192535	intron-variant, upstream-variant-2KB	USP54	GRCh38.p7	10:73555211	CTCTTGATCTAACTT[C/T]GGGGAAGGCAGAGAA	159195
rs7083082	snp	C/T	0.0948562	0.196037	intron-variant, nc-transcript-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73505256	ATCTCTCCATAATTC[C/T]TTCCCCAACACACCA	159195
rs7083344	snp	C/T	0.0321035	0.122561	missense, nc-transcript-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73505378	GAAGTCTTTGAGAGA[C/T]CAGGATCATGGGCTG	159195
rs7092814	snp	A/G/T	0.000399281	0.0141238	intron-variant	USP54	GRCh38.p7	10:73560381	GAGACCAggccgggc[A/G/T]tggtggctcacgcct	159195
rs7092904	snp	A/C	0.348794	0.229651	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73507446	ttgggaggccaaggc[A/C]ggtggatcacgaggt	159195
rs7093077	snp	A/G	0.0952156	0.196321	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73507629	cagtgagtcaacatc[A/G]cgccactgaactcca	159195
rs7093203	snp	C/T	0.0908922	0.192833	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73507628	gcagtgagtcaacat[C/T]acgccactgaactcc	159195
rs7094096	snp	C/T	0.0821764	0.185298	intron-variant, upstream-variant-2KB	USP54	GRCh38.p7	10:73555234	GCAGAGAAGAGCTGG[C/T]TAGTTTCTCCCTTGA	159195
rs7094792	snp	C/T	0.0908922	0.192833	intron-variant	USP54	GRCh38.p7	10:73555736	TACATAACCACTTAC[C/T]CCACAGGAAAAACTG	159195
rs7094804	snp	C/G	0.101658	0.201233	intron-variant	USP54	GRCh38.p7	10:73555760	AAAACTGAAAGGGGA[C/G]ACCCTTCTGGATATG	159195
rs7095604	snp	C/T	0.0178098	0.0926698	intron-variant	USP54	GRCh38.p7	10:73539873	gctcacgcctgtaat[C/T]cctacactttgggag	159195
rs7097806	snp	A/G	0.393434	0.20476	intron-variant	USP54	GRCh38.p7	10:73538707	gtcacagctactcaa[A/G]agactaaggtgagag	159195
rs7098409	snp	C/T	0.0905309	0.192535	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73501707	gatatggccctgctg[C/T]tcctcactttatttc	159195
rs7098453	snp	A/G	0.350109	0.229081	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73501863	tttcatatcactgag[A/G]tctctaatcaaaagt	159195
rs7393580	snp	A/G			intron-variant	USP54	GRCh38.p7	10:73548260	ggatgtggagaaata[A/G]gaacacttttacact	159195
rs7895879	snp	A/C	0	0	intron-variant	USP54	GRCh38.p7	10:73527835	tgaaaccccatcgat[A/C]ccaaaaaaaaaaaaa	159195
rs7899100	snp	A/G	0.0948562	0.196037	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73503802	cagtggctcaatctc[A/G]gctcactgcaacctc	159195
rs7899149	snp	G/T	0.34989	0.229177	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73503571	ACTCTCCTAGGAAAA[G/T]AACAATTTGCCATTA	159195
rs7899274	snp	C/T	0.36606	0.221428	intron-variant	USP54	GRCh38.p7	10:73585003	GACTCCTAAAACACA[C/T]TCCACACCATGTCAC	159195
rs7909213	snp	C/T	0.102014	0.201495	intron-variant	USP54	GRCh38.p7	10:73523471	ATGGGTGAATTAAGA[C/T]TTAAAAAATTATTTT	159195
rs7916909	snp	C/T	0.0952156	0.196321	intron-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73507713	ACAGCTATggctggc[C/T]gtggtagctcatgcc	159195
rs7917201	snp	C/T	0.0952156	0.196321	intron-variant	USP54	GRCh38.p7	10:73507953	ccgtgattgtgccac[C/T]gtactccagcctggg	159195
rs7920169	snp	C/T	0.00636936	0.0560724	intron-variant	USP54	GRCh38.p7	10:73544005	aggagtacagtagag[C/T]gatctcggctcactg	159195
rs7921483	snp	C/T			intron-variant	USP54	GRCh38.p7	10:73508956	aggtgtgagccagtg[C/T]acccggccAGAACAT	159195
rs9703377	snp	A/T	0.5	0	intron-variant	USP54	GRCh38.p7	10:73523882	TATTTATTTATTATT[A/T]ATTATTATTATTATT	159195
rs9703929	snp	A/T	0.5	0	intron-variant	USP54	GRCh38.p7	10:73523883	ATTTATTTATTATTT[A/T]TTATTATTATTATTA	159195
rs10465980	snp	C/G	0.0166325	0.0896639	intron-variant	USP54	GRCh38.p7	10:73540821	AACCTAAAATAAGAT[C/G]CCAGAAAGTTCATTT	159195
rs10601969	in-del	-/AA	0.270621	0.249148	intron-variant	USP54	GRCh38.p7	10:73570408	GGAAGTAAAAAAAAA[-/AA]CAGAAATGAAAAACT	159195
rs10658284	in-del	-/TC	0.236724	0.249647	intron-variant	USP54	GRCh38.p7	10:73550695	GAGATATTATTAAAA[-/TC]TCTGTTTTTTTTTAA	159195
rs10824021	snp	A/T			intron-variant	USP54	GRCh38.p7	10:73561100	acacagcgagactcc[A/T]tctcaaaaaaaaaaa	159195
rs11000695	snp	C/T	0.475081	0.108804	intron-variant, nc-transcript-variant	USP54, PPP3CB-AS1	GRCh38.p7	10:73505844	CACTGCACTCCAGCC[C/T]GGGTGACAGAGCGAG	159195
rs11000696	snp	C/T	0	0	intron-variant	USP54	GRCh38.p7	10:73508108	TGAAGGGAGTAGAAT[C/T]TGATTCCTTTAAAAG	159195
rs11000698	snp	A/G	0.0486741	0.148216	intron-variant	USP54	GRCh38.p7	10:73513683	AACTATATAGTACAT[A/G]TGTATAAAAATGAAA	159195
rs11000700	snp	C/G			intron-variant	USP54	GRCh38.p7	10:73527371	ggtgtggtggtgggc[C/G]cctgtagtgccagct	159195
rs11000701	snp	C/T	0	0	intron-variant	USP54	GRCh38.p7	10:73535108	TTTAGATGGAAAGTC[C/T]CAGGACAACCTGTCA	159195
rs11000706	snp	C/T	0.0126979	0.078662	intron-variant	USP54	GRCh38.p7	10:73555447	ATAAGCTACATATCA[C/T]ACTCATTCCTGCTAC	159195
rs11000707	snp	C/T			intron-variant	USP54	GRCh38.p7	10:73561102	acagcgagactccat[C/T]tcaaaaaaaaaaaaa	159195
rs11000708	snp	A/C	0	0	intron-variant	USP54	GRCh38.p7	10:73564899	CAAGTCCTCATCTCT[A/C]CCAAAAAAAAAAAAA	159195
rs11000709	snp	C/T	0.0763149	0.179815	intron-variant	USP54	GRCh38.p7	10:73565067	TGACAGAGCAAGATC[C/T]TATCTCTAAAAAATA	159195
rs11000711	snp	A/C	0.089084	0.191327	intron-variant	USP54	GRCh38.p7	10:73570516	CTAGGGAATAGAAAA[A/C]TTTTAGTACTGGCAT	159195
rs11000714	snp	C/T	0.0142736	0.0832652	intron-variant	USP54	GRCh38.p7	10:73573592	aacatggcgaaaccc[C/T]gtctctactaaaagt	159195
rs11000715	snp	A/G	0.0341408	0.126114	intron-variant	USP54	GRCh38.p7	10:73575023	caaggtcaggagttc[A/G]agaccagcctggcca	159195
rs11000716	snp	C/T	0.0341408	0.126114	intron-variant	USP54	GRCh38.p7	10:73575173	GAGGTTGCAGTGAGC[C/T]GAGATTGCGCCACTG	159195
rs11000717	snp	A/G	0	0	intron-variant	USP54	GRCh38.p7	10:73587520	GCCAACAATATTGCA[A/G]AACCTCGGGAGGTAA	159195
rs11000718	snp	G/T	0.0126979	0.078662	upstream-variant-2KB, utr-variant-5-prime, intron-variant, nc-transcript-variant	USP54	GRCh38.p7	10:73592287	ATCCTTGCCAAATAT[G/T]AAGGTCTGTTGTGTT	159195
rs11285755	in-del	-/A	0.471673	0.115589	intron-variant	USP54	GRCh38.p7	10:73537771	ATCAACACACACATT[-/A]AAAAAAAAAAAAAAA	159195
rs11426981	in-del	-/G	0.0205511	0.0992634	intron-variant	USP54	GRCh38.p7	10:73525567	GCTATCTGAAGAGAA[-/G]GGGAGAATAGTCTCA	159195
rs11510893	snp	C/T			intron-variant	USP54	GRCh38.p7	10:73569607	AAATACAAAAATTAG[C/T]TAGGGCGTGGTGGCA	159195
rs11594953	snp	C/T	0	0	intron-variant	USP54	GRCh38.p7	10:73519229	CGGTCCAAATTAATG[C/T]TTATTTAAATTCATC	159195
rs11596131	snp	C/T	0.00593467	0.054149	intron-variant	USP54	GRCh38.p7	10:73560295	TTTTCCATCATCACT[C/T]TAGCCTCACCCACAA	159195
rs11596511	snp	A/T	0	0	intron-variant	USP54	GRCh38.p7	10:73543163	AAAAGCAGTATACCA[A/T]CAATATTTAATAGAC	159195
rs11596893	snp	A/C	0	0	intron-variant	USP54	GRCh38.p7	10:73589651	AATAATGAAAGTATG[A/C]CAGTGCTATCAACAA	159195
rs12219934	snp	A/C	0	0	intron-variant, upstream-variant-2KB	USP54	GRCh38.p7	10:73579251	ccactgcacccggac[A/C]aagattccttagata	159195
rs12242427	snp	A/C	0.0678174	0.1712	intron-variant	USP54	GRCh38.p7	10:73537221	TTTATATGCTCTTCA[A/C]ATATTAATATAATCA	159195
rs12244131	snp	A/G	0.0197687	0.0974348	intron-variant	USP54	GRCh38.p7	10:73543557	atttttagtagagac[A/G]aggtttcaccgtgtt	159195
rs12244795	snp	C/T	0.0119091	0.0762411	intron-variant	USP54	GRCh38.p7	10:73589201	AAACTCACATTTTTC[C/T]GTTTAGAGATAACTC	159195
rs12245973	snp	C/T	0.0267878	0.112589	intron-variant	USP54	GRCh38.p7	10:73544134	ttttaatagagacgg[C/T]gtttcaccacgttga	159195
rs12247991	snp	C/T	0.0260105	0.111035	intron-variant	USP54	GRCh38.p7	10:73551053	gagcttgcagtgagc[C/T]gagattgcatactgc	159195
rs12248024	snp	C/T	0.346368	0.23068	intron-variant	USP54	GRCh38.p7	10:73545107	TGGAGGCAATGTAGC[C/T]ATATAGCACATCACA	159195
rs12251843	snp	A/G	0.347253	0.230308	intron-variant	USP54	GRCh38.p7	10:73552306	tagtcccagctactc[A/G]ggaggctgacacagg	159195
rs12255505	snp	A/C	0.246628	0.249977	intron-variant, synonymous-codon	USP54	GRCh38.p7	10:73529601	TCCCTCCACTTGTCT[A/C]AGCCATGCCTGAAAG	159195
rs12256735	snp	A/T	0.36606	0.221428	intron-variant	USP54	GRCh38.p7	10:73591140	AATTTCAAAGTTTAA[A/T]CTACTGCTATTAAAA	159195

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