DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
WDR88 | hsa-miR-3158 | beg:114 | end:133 | pic:3' CAGGACGTCTCTCC-TTCGGGAA 5'& |||| || ||||||| &5' -----GCAG-GACCCAAGCCCT- 3' |
WDR88 | hsa-miR-370 | beg:86 | end:104 | pic:3' TGGTCCAAGGTGGGGTCGTCCG 5'& ||||| |.|||||||| &5' -CCAGG------CTCAGCAGGC 3' |
WDR88 | ebv-miR-BART12 | beg:0 | end:11 | pic:3' TTGGTGTGGTTTGTGGTGTCCT 5'& .||||||| &5' -------------GCCACAGG- 3' |
WDR88 | mcv-miR-M1-3p | beg:15 | end:34 | pic:3' AAGTCCTTCTCTTAGGTCGTGT 5'& .|| || ||||||||| &5' ------GAGTGACTCCAGCACA 3' |
WDR88 | hsa-miR-149star | beg:72 | end:91 | pic:3' CGTGTCGGGGGCA--GGGAGGGA 5'& |.|..| ||||||| &5' ------CTCTTGGGCCCCTCCC- 3' |
WDR88 | hsa-miR-3146 | beg:33 | end:48 | pic:3' GGTAAGAAAGATAGGATCGTAC 5'& ||| ||||||||| &5' ---------CTA-CCTAGCATG 3' |
WDR88 | ebv-miR-BART19-5p | beg:167 | end:182 | pic:3' GTACAGTACAAACG--CCCCTTACA 5'& || |||||.|| &5' ------------GCTTGGGGAGTG- 3' |
WDR88 | hsa-miR-4309 | beg:10 | end:30 | pic:3' ACCTTAGGAT-----CTGAGGTC 5'& ||| |||||||| &5' ------CCTTTGAGTGACTCCAG 3' |
WDR88 | hsa-miR-668 | beg:6 | end:25 | pic:3' CATCACCCGGCTCGGCTCACTGT 5'& |||| ..||||||| &5' ------GGCCCCTTTGAGTGAC- 3' |
WDR88 | hsa-miR-1205 | beg:91 | end:112 | pic:3' GAGTTTCGTTTGGGACGTCT 5'& ||| ||||..||. |||| &5' CTC--AGCAGGCCTGTCAGA 3' |
WDR88 | hsa-miR-1207-5p | beg:80 | end:110 | pic:3' GGGGAGGGTCGGAG------GGACGGT 5'& |||||||||| ||| ||||.|| &5' CCCCTCCCAGGCTCAGCAGGCCTGTCA 3' |
WDR88 | hsa-miR-1224-5p | beg:149 | end:170 | pic:3' GGTGGAGGGCTCAGGAGTG 5'& ||||||||. || |||| &5' CCACCTCCTCAGCTCTCA- 3' |
WDR88 | hsa-miR-1225-3p | beg:53 | end:74 | pic:3' GACCCCCGCCGTGTCCCCGAGT 5'& ||||| ..||||||||. &5' ---GGGGCTTTGCAGGGGCTT- 3' |
WDR88 | hsa-miR-1226star | beg:150 | end:170 | pic:3' GGGGTAGGTCCGGACGTACGGGAGTG 5'& ||| || ||| || ||.|||| &5' --CCA-CCT--CCT-CA-GCTCTCA- 3' |
WDR88 | hsa-miR-124star | beg:169 | end:187 | pic:3' TAGTTCCAGGCGACACTTGTGC 5'& | .|| |||||||| &5' -TTGGGGA-----GTGAACAC- 3' |
WDR88 | hsa-miR-1274a | beg:53 | end:72 | pic:3' ACCGCGGACTTGTCCCTG 5'& || ||.| .|||||.| &5' -GGGGCTTT-GCAGGGGC 3' |
WDR88 | hsa-miR-1287 | beg:12 | end:31 | pic:3' CTGAGCTTGGTGACTAGGTCGT 5'& .|.||. || ||||||| &5' --TTTGAGTGAC---TCCAGCA 3' |
WDR88 | hsa-miR-1289 | beg:7 | end:29 | pic:3' TTTTACGTCTAAGGA----C-CTGAGGT 5'& ||. ||| | ||||||| &5' -------AGGCCCCTTTGAGTGACTCCA 3' |
WDR88 | hsa-miR-129-3p | beg:42 | end:74 | pic:3' TACGA--AAAACCCCA-----TTCCCGAA 5'& |||. ||| |||| |.|||||| &5' ATGTAGGTTTCGGGGCTTTGCAGGGGCTT 3' |
WDR88 | hsa-miR-145 | beg:97 | end:116 | pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& ||| |||| |.|||||. &5' AGG----CCTGTC-AGACTGGG- 3' |
WDR88 | hsa-miR-1911 | beg:92 | end:114 | pic:3' GGGTTGTCTGTACCGCCATGAGT 5'& |.||.|||.| || | | ||| &5' CTCAGCAGGCCTGTCAG-ACT-- 3' |
WDR88 | hsa-miR-1913 | beg:99 | end:122 | pic:3' ACCGT-C-GTCGCCTCCCCCGTCT 5'& ||| | ||| |||||||. &5' -GGCCTGTCAGACT--GGGGCAGG 3' |
WDR88 | hsa-miR-1914 | beg:15 | end:36 | pic:3' GTCTTCACCC-GGCCCGTGTCCC 5'& .|||| || ||||||| &5' ---GAGTGACTCCA-GCACAGG- 3' |
WDR88 | hsa-miR-196a | beg:23 | end:43 | pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |||.| ||| .||||||| &5' -CCAGC-ACAG---GCTACCTA 3' |
WDR88 | hsa-miR-196b | beg:23 | end:43 | pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& |||.| ||||| ||||||| &5' -CCAGC-ACAGG---CTACCTA 3' |
WDR88 | hsa-miR-2113 | beg:17 | end:36 | pic:3' CACTGTCTCGGTTCGTGTTTA 5'& ||||| || ||||||.. &5' GTGACT---CC-AGCACAGG- 3' |
WDR88 | hsa-miR-2114star | beg:46 | end:74 | pic:3' TTCAGGGAA-CGAA----CTCCGAGC 5'& |.|| | |||| |.||||. &5' AGGTTTCGGGGCTTTGCAGGGGCTT- 3' |
WDR88 | hsa-miR-219-1-3p | beg:152 | end:168 | pic:3' GCCCTGCAGGTCTGAGTTGAGA 5'& || ||||.|||| &5' --------CCTC-CTCAGCTCT 3' |
WDR88 | hsa-miR-2355 | beg:170 | end:179 | pic:3' AACAGGTAACATAGACCCCTA 5'& .|||||| &5' -------------TTGGGGA- 3' |
WDR88 | hsa-miR-2861 | beg:79 | end:97 | pic:3' GGCGGGTGGCGGTCCGGGG 5'& |||| |. ||||||.| &5' --GCCC-CTCCCAGGCTC- 3' |
WDR88 | hsa-miR-2909 | beg:115 | end:136 | pic:3' GGTTCTCTACAACCGGGATTG 5'& ||.|| |||||..| &5' -CAGGACCCAA--GCCCTGGC 3' |
WDR88 | hsa-miR-296-3p | beg:145 | end:169 | pic:3' CCTCTCGGAGGTGG-GTTGGGAG 5'& || ||| || || ||.|.||| &5' --AGTGCCACCTCCTCAGCTCTC 3' |
WDR88 | hsa-miR-296-5p | beg:45 | end:75 | pic:3' TGTCCTAACTCCC-------CCCCGGGA 5'& .||| || .||| |||||..| &5' -TAGGTTTCGGGGCTTTGCAGGGGCTTT 3' |
WDR88 | hsa-miR-3127 | beg:115 | end:134 | pic:3' GAAGGGTAA-GGTGTTCGGGACTA 5'& || || |||||||||. &5' -----CAGGACC-CAAGCCCTGG- 3' |
WDR88 | hsa-miR-3157 | beg:117 | end:140 | pic:3' TCTGACGTGATC-GGACCGACTT 5'& .||| || || ||||||||.| &5' GGACC-CA--AGCCCTGGCTGGA 3' |
WDR88 | hsa-miR-3160 | beg:157 | end:174 | pic:3' ACCCGAAAGATC-AGAGTCGAGA 5'& || || ||||||||. &5' -------TC-AGCTCTCAGCTT- 3' |
WDR88 | hsa-miR-3184 | beg:63 | end:89 | pic:3' TTTTCGAGCCAGACTCCGGGGAGT 5'& |...|||. ||| .|||||||| &5' AGGGGCTTTCTCTTGGGCCCCTC- 3' |
WDR88 | hsa-miR-3184 | beg:5 | end:17 | pic:3' TTTTCGAGCCAGACTCCGGGGAGT 5'& ||||||||. &5' --------------AGGCCCCTT- 3' |
WDR88 | hsa-miR-3198 | beg:8 | end:29 | pic:3' AGAGGTAAGGGG----TC-CTGAGGTG 5'& |||| || ||||||| &5' --------CCCCTTTGAGTGACTCCA- 3' |
WDR88 | hsa-miR-320e | beg:152 | end:174 | pic:3' GGAAGAGTTG-G-GTCGAAA 5'& ||| ||||.| | |||||| &5' CCTCCTCAGCTCTCAGCTT- 3' |
WDR88 | hsa-miR-324-3p | beg:100 | end:121 | pic:3' GGTC-GTCGTGGACCCCGTCA 5'& || | ||| ||||||||| &5' CCTGTCAGA--CTGGGGCAG- 3' |
WDR88 | hsa-miR-423-5p | beg:68 | end:89 | pic:3' TTTCAGAGCGAGAGA-CGGGGAGT 5'& ||. ||||. ||||||| &5' -----CTTTCTCTTGGGCCCCTC- 3' |
WDR88 | hsa-miR-4264 | beg:98 | end:117 | pic:3' TTACTGGTA---CTGACTCA 5'& |.|| |||||.| &5' ---GGCCTGTCAGACTGGG- 3' |
WDR88 | hsa-miR-4289 | beg:130 | end:153 | pic:3' ACT-ATC-GGGACGTGTTACG 5'& |. |.| |.| |||||.||| &5' -GGCTGGACTCAGCACAGTGC 3' |
WDR88 | hsa-miR-4294 | beg:36 | end:56 | pic:3' GGGA-CG-ACATCTGAGGG 5'& ||| || ||||| |.| &5' -CCTAGCATGTAGGTTTC- 3' |
WDR88 | hsa-miR-4299 | beg:10 | end:31 | pic:3' CGGAGAG-TACAGTGGTCG 5'& |||.| .|| | ||||| &5' -CCTTTGAGTGACTCCAGC 3' |
WDR88 | hsa-miR-4300 | beg:157 | end:170 | pic:3' CTTCATCAGGTCGAGGGT 5'& .||||||.|| &5' --------TCAGCTCTCA 3' |
WDR88 | hsa-miR-4311 | beg:150 | end:169 | pic:3' GTGT--GAGTCGAGAGAAAG 5'& ||| |||||||||| &5' CACCTCCTCAGCTCTC---- 3' |
WDR88 | hsa-miR-431 | beg:107 | end:124 | pic:3' ACGTACTG-CCGGACGTTCTGT 5'& ||| || |||.||| &5' -----GACTGGG--GCAGGAC- 3' |
WDR88 | hsa-miR-4312 | beg:111 | end:132 | pic:3' ACCCCTGTCCTT-GTTCCGG 5'& |||.||||| |||| || &5' --GGGGCAGGACCCAAGCCC 3' |
WDR88 | hsa-miR-4315 | beg:86 | end:104 | pic:3' CAGGT-CGAGTCTTTCGCC 5'& ||| |||||| |.|| &5' --CCAGGCTCAGCAGGC-- 3' |
WDR88 | hsa-miR-4329 | beg:37 | end:59 | pic:3' CACCTTGATC------CCAGAGTCC 5'& |||| |||.||.|| &5' ------CTAGCATGTAGGTTTCGGG 3' |
WDR88 | hsa-miR-483-3p | beg:171 | end:183 | pic:3' TTCTGCCCTCCTCTCCTCACT 5'& |.||||||| &5' ------------GGGGAGTGA 3' |
WDR88 | hsa-miR-518a-5p | beg:47 | end:68 | pic:3' CTTTCCCGAAGG---GAAACGTC 5'& ||.||| |||||||| &5' -----GGTTTCGGGGCTTTGCAG 3' |
WDR88 | hsa-miR-527 | beg:47 | end:68 | pic:3' CTTTCCCGAAGG---GAAACGTC 5'& ||.||| |||||||| &5' -----GGTTTCGGGGCTTTGCAG 3' |
WDR88 | hsa-miR-544 | beg:189 | end:207 | pic:3' CTTGAACGATTTTTACGTCTTA 5'& |.| ||||||||| &5' ------GTTTTC-ATGCAGAAT 3' |
WDR88 | hsa-miR-554 | beg:128 | end:151 | pic:3' TGACCGACTC-AGTCCTGATCG 5'& |||||||. |||| || ||. &5' -CTGGCTGGACTCAGCAC-AGT 3' |
WDR88 | hsa-miR-622 | beg:95 | end:115 | pic:3' CGAGGTTGGAGTCGTCTGACA 5'& || ..||| ||||||| &5' GCA--GGCCTGT-CAGACTG- 3' |
WDR88 | hsa-miR-888 | beg:6 | end:23 | pic:3' ACTGACTGTCGAA-AAACTCAT 5'& .|| |||||||. &5' --------GGCCCCTTTGAGTG 3' |
WDR88 | hsa-miR-892a | beg:131 | end:152 | pic:3' GATGCG-TCTTTCCTGTGTCAC 5'& || .|| .||||||| &5' ----GCTGGACTCAGCACAGTG 3' |
WDR88 | hsa-miR-920 | beg:154 | end:169 | pic:3' ATGACGAAGGTGTCGAGGGG 5'& ||| ||||||.| &5' -------TCCTCAGCTCTC- 3' |
WDR88 | hsa-miR-939 | beg:150 | end:174 | pic:3' GTGGGGGTCTCG-GAGTCGAGGGGT 5'& ||||.|| ||| |||||||. &5' CACCTCCTCAGCTCTCAGCTT---- 3' |
WDR88 | hsa-miR-93star | beg:89 | end:102 | pic:3' GCCCTTCACGATCGAGTCGTCA 5'& .||||||||| &5' -----------GGCTCAGCAG- 3' |
WDR88 | hsv1-miR-H2 | beg:77 | end:99 | pic:3' TCAGCGTGAGCAGGGACCGAGTCC 5'& |.| .| | |||| ||||||| &5' --TTGGGCCCCTCCCAGGCTCAG- 3' |
WDR88 | hsv1-miR-H6-3p | beg:166 | end:182 | pic:3' CCCTACCTTCCTGCCCTTCAC 5'& || .|||.|||| &5' --------AGCTTGGGGAGTG 3' |
WDR88 | hsv1-miR-H7 | beg:4 | end:18 | pic:3' GGAAACCAACGTCTGGGGAAA 5'& |||.||||||| &5' ----------CAGGCCCCTTT 3' |
WDR88 | hsv2-miR-H10 | beg:146 | end:163 | pic:3' GGCG-GGTGGGGGCGTGGG 5'& |. |||||.|| || | &5' --GTGCCACCTCCTCAGC- 3' |
WDR88 | hsv2-miR-H2 | beg:75 | end:99 | pic:3' AGCGCGTACTGGGTCCGAGTCT 5'& |.| || ||||||||||| &5' TTGGGCCCCTCCCAGGCTCAG- 3' |
WDR88 | kshv-miR-K12-10astar | beg:110 | end:131 | pic:3' TCACCACCATAGCGGGGTTCGG 5'& ||| || |||||||| &5' --TGG-GGCAGGA-CCCAAGCC 3' |
WDR88 | kshv-miR-K12-2star | beg:158 | end:180 | pic:3' GTCGAGA-TCGGGACCTTCTAG 5'& ||||||| |||. ||.|| &5' CAGCTCTCAGCTTGGGGAG--- 3' |
WDR88 | sv40-miR-S1-5p | beg:0 | end:17 | pic:3' TTCCGAGTAAAGTCCGGGGAGT 5'& || || |||||||||. &5' ---GC-CA---CAGGCCCCTT- 3' |