Mutation - TCGA Type Chromosome Start Position End Position Strand Variant Classification Variant Type Reference Allele Tumor_seq Allele 1 Tumor_seq Allele 2 Tumor Sample Barcode Matched Norm Sample Barcode Genome Change cDNA Change Codon Change Protein Change BLCA 10 104404705 104404705 + Missense_Mutation SNP G G C TCGA-S5-A6DX-01A-11D-A31L-08 TCGA-S5-A6DX-10A-01D-A31J-08 g.chr10:104404705G>C c.331G>C c.(331-333)Gag>Cag p.E111Q BLCA 10 104404828 104404828 + Missense_Mutation SNP C C T TCGA-XF-A9T0-01A-11D-A391-08 TCGA-XF-A9T0-10A-01D-A394-08 g.chr10:104404828C>T c.454C>T c.(454-456)Cgc>Tgc p.R152C BLCA 10 104404923 104404923 + Missense_Mutation SNP G G T TCGA-GC-A3YS-01A-11D-A23M-08 TCGA-GC-A3YS-10A-01D-A23K-08 g.chr10:104404923G>T c.549G>T c.(547-549)gaG>gaT p.E183D BRCA 10 104404572 104404572 + Silent SNP G G A TCGA-AC-A23H-01A-11D-A159-09 TCGA-AC-A23H-11A-12D-A17G-09 g.chr10:104404572G>A c.198G>A c.(196-198)gaG>gaA p.E66E BRCA 10 104416924 104416924 + Missense_Mutation SNP C C G TCGA-A2-A04W-01A-31D-A10Y-09 TCGA-A2-A04W-10A-01D-A110-09 g.chr10:104416924C>G c.1469C>G c.(1468-1470)tCc>tGc p.S490C COAD 10 104414434 104414434 + Missense_Mutation SNP C C T TCGA-A6-6781-01A-22D-1924-10 TCGA-A6-6781-10A-01D-1924-10 g.chr10:104414434C>T c.595C>T c.(595-597)Cgg>Tgg p.R199W COAD 10 104416556 104416556 + Silent SNP C C T TCGA-AA-3984-01A-02W-0995-10 TCGA-AA-3984-10A-01W-0999-10 g.chr10:104416556C>T c.1101C>T c.(1099-1101)tgC>tgT p.C367C COAD 10 104416655 104416655 + Silent SNP C C T TCGA-AA-3949-01A-01W-0995-10 TCGA-AA-3949-10A-01W-0995-10 g.chr10:104416655C>T c.1200C>T c.(1198-1200)taC>taT p.Y400Y COAD 10 104416664 104416664 + Silent SNP G G T TCGA-D5-6540-01A-11D-1719-10 TCGA-D5-6540-10A-01D-1719-10 g.chr10:104416664G>T c.1209G>T c.(1207-1209)gcG>gcT p.A403A COAD 10 104416963 104416963 + Nonsense_Mutation SNP C C G TCGA-AD-6895-01A-11D-1924-10 TCGA-AD-6895-10A-01D-1924-10 g.chr10:104416963C>G c.1508C>G c.(1507-1509)tCa>tGa p.S503* COAD 10 104416989 104416989 + Missense_Mutation SNP G G A TCGA-D5-6928-01A-11D-1924-10 TCGA-D5-6928-10A-01D-1924-10 g.chr10:104416989G>A c.1534G>A c.(1534-1536)Gtc>Atc p.V512I COADREAD 10 104414434 104414434 + Missense_Mutation SNP C C T TCGA-A6-6781-01A-22D-1924-10 TCGA-A6-6781-10A-01D-1924-10 g.chr10:104414434C>T c.595C>T c.(595-597)Cgg>Tgg p.R199W COADREAD 10 104416556 104416556 + Silent SNP C C T TCGA-AA-3984-01A-02W-0995-10 TCGA-AA-3984-10A-01W-0999-10 g.chr10:104416556C>T c.1101C>T c.(1099-1101)tgC>tgT p.C367C COADREAD 10 104416655 104416655 + Silent SNP C C T TCGA-AA-3949-01A-01W-0995-10 TCGA-AA-3949-10A-01W-0995-10 g.chr10:104416655C>T c.1200C>T c.(1198-1200)taC>taT p.Y400Y COADREAD 10 104416664 104416664 + Silent SNP G G T TCGA-D5-6540-01A-11D-1719-10 TCGA-D5-6540-10A-01D-1719-10 g.chr10:104416664G>T c.1209G>T c.(1207-1209)gcG>gcT p.A403A COADREAD 10 104416963 104416963 + Nonsense_Mutation SNP C C G TCGA-AD-6895-01A-11D-1924-10 TCGA-AD-6895-10A-01D-1924-10 g.chr10:104416963C>G c.1508C>G c.(1507-1509)tCa>tGa p.S503* COADREAD 10 104416989 104416989 + Missense_Mutation SNP G G A TCGA-D5-6928-01A-11D-1924-10 TCGA-D5-6928-10A-01D-1924-10 g.chr10:104416989G>A c.1534G>A c.(1534-1536)Gtc>Atc p.V512I ESCA 10 104404515 104404515 + Silent SNP C C T TCGA-LN-A49X-01A-31D-A27G-09 TCGA-LN-A49X-10A-01D-A27G-09 g.chr10:104404515C>T c.141C>T c.(139-141)agC>agT p.S47S ESCA 10 104414960 104414960 + Missense_Mutation SNP G G A TCGA-L5-A4OI-01A-11D-A27G-09 TCGA-L5-A4OI-11A-11D-A27G-09 g.chr10:104414960G>A c.790G>A c.(790-792)Gag>Aag p.E264K ESCA 10 104416539 104416539 + Missense_Mutation SNP G G A TCGA-L5-A8NG-01A-11D-A37C-09 TCGA-L5-A8NG-11A-11D-A37F-09 g.chr10:104416539G>A c.1084G>A c.(1084-1086)Gtc>Atc p.V362I GBM 10 104404874 104404874 + Missense_Mutation SNP G G A TCGA-14-1450-01B-01D-1845-08 TCGA-14-1450-10B-01D-1845-08 g.chr10:104404874G>A c.500G>A c.(499-501)tGc>tAc p.C167Y GBMLGG 10 104404874 104404874 + Missense_Mutation SNP G G A TCGA-14-1450-01B-01D-1845-08 TCGA-14-1450-10B-01D-1845-08 g.chr10:104404874G>A c.500G>A c.(499-501)tGc>tAc p.C167Y GBMLGG 10 104414976 104414976 + Missense_Mutation SNP C C T TCGA-DU-6392-01A-11D-1705-08 TCGA-DU-6392-10A-01D-1705-08 g.chr10:104414976C>T c.806C>T c.(805-807)gCg>gTg p.A269V GBMLGG 10 104416970 104416970 + Silent SNP G G A TCGA-DU-6392-01A-11D-1705-08 TCGA-DU-6392-10A-01D-1705-08 g.chr10:104416970G>A c.1515G>A c.(1513-1515)ccG>ccA p.P505P HNSC 10 104404917 104404917 + Silent SNP C C T TCGA-F7-A624-01A-22D-A30E-08 TCGA-F7-A624-10A-01D-A30H-08 g.chr10:104404917C>T c.543C>T c.(541-543)gaC>gaT p.D181D HNSC 10 104415877 104415877 + Silent SNP G G A TCGA-CV-5971-01A-11D-1683-08 TCGA-CV-5971-11A-01D-1683-08 g.chr10:104415877G>A c.915G>A c.(913-915)gtG>gtA p.V305V HNSC 10 104416556 104416556 + Silent SNP C C T TCGA-CN-5359-01A-01D-1434-08 TCGA-CN-5359-10A-01D-1434-08 g.chr10:104416556C>T c.1101C>T c.(1099-1101)tgC>tgT p.C367C HNSC 10 104416663 104416663 + Missense_Mutation SNP C C T TCGA-CR-7370-01A-11D-2129-08 TCGA-CR-7370-10A-01D-2129-08 g.chr10:104416663C>T c.1208C>T c.(1207-1209)gCg>gTg p.A403V HNSC 10 104416918 104416918 + Missense_Mutation SNP C C T TCGA-CQ-7068-01A-11D-2078-08 TCGA-CQ-7068-10A-01D-2078-08 g.chr10:104416918C>T c.1463C>T c.(1462-1464)cCc>cTc p.P488L KIPAN 10 104404444 104404444 + Missense_Mutation SNP G G A TCGA-2Z-A9JK-01A-11D-A42J-10 TCGA-2Z-A9JK-10A-01D-A42M-10 g.chr10:104404444G>A c.70G>A c.(70-72)Gag>Aag p.E24K KIPAN 10 104404879 104404879 + Missense_Mutation SNP T T C TCGA-BP-5180-01A-01D-1429-08 TCGA-BP-5180-11A-01D-1429-08 g.chr10:104404879T>C c.505T>C c.(505-507)Tac>Cac p.Y169H KIPAN 10 104404881 104404881 + Silent SNP C C T TCGA-DW-7834-01A-11D-2136-08 TCGA-DW-7834-10A-01D-2136-08 g.chr10:104404881C>T c.507C>T c.(505-507)taC>taT p.Y169Y KIPAN 10 104415049 104415049 + Silent SNP G G A TCGA-A4-8098-01A-11D-2396-08 TCGA-A4-8098-10A-01D-2396-08 g.chr10:104415049G>A c.879G>A c.(877-879)acG>acA p.T293T KIPAN 10 104416093 104416093 + Missense_Mutation SNP C C A TCGA-HE-A5NJ-01A-11D-A26P-10 TCGA-HE-A5NJ-10A-01D-A26P-10 g.chr10:104416093C>A c.999C>A c.(997-999)ttC>ttA p.F333L KIRC 10 104404879 104404879 + Missense_Mutation SNP T T C TCGA-BP-5180-01A-01D-1429-08 TCGA-BP-5180-11A-01D-1429-08 g.chr10:104404879T>C c.505T>C c.(505-507)Tac>Cac p.Y169H KIRP 10 104404444 104404444 + Missense_Mutation SNP G G A TCGA-2Z-A9JK-01A-11D-A42J-10 TCGA-2Z-A9JK-10A-01D-A42M-10 g.chr10:104404444G>A c.70G>A c.(70-72)Gag>Aag p.E24K KIRP 10 104404881 104404881 + Silent SNP C C T TCGA-DW-7834-01A-11D-2136-08 TCGA-DW-7834-10A-01D-2136-08 g.chr10:104404881C>T c.507C>T c.(505-507)taC>taT p.Y169Y KIRP 10 104415049 104415049 + Silent SNP G G A TCGA-A4-8098-01A-11D-2396-08 TCGA-A4-8098-10A-01D-2396-08 g.chr10:104415049G>A c.879G>A c.(877-879)acG>acA p.T293T KIRP 10 104416093 104416093 + Missense_Mutation SNP C C A TCGA-HE-A5NJ-01A-11D-A26P-10 TCGA-HE-A5NJ-10A-01D-A26P-10 g.chr10:104416093C>A c.999C>A c.(997-999)ttC>ttA p.F333L LGG 10 104414976 104414976 + Missense_Mutation SNP C C T TCGA-DU-6392-01A-11D-1705-08 TCGA-DU-6392-10A-01D-1705-08 g.chr10:104414976C>T c.806C>T c.(805-807)gCg>gTg p.A269V LGG 10 104416970 104416970 + Silent SNP G G A TCGA-DU-6392-01A-11D-1705-08 TCGA-DU-6392-10A-01D-1705-08 g.chr10:104416970G>A c.1515G>A c.(1513-1515)ccG>ccA p.P505P LIHC 10 104414949 104414949 + Missense_Mutation SNP A A G TCGA-DD-A119-01A-11D-A12Z-10 TCGA-DD-A119-10A-01D-A12Z-10 g.chr10:104414949A>G c.779A>G c.(778-780)aAg>aGg p.K260R LUAD 10 104404540 104404540 + Missense_Mutation SNP A A T TCGA-55-7910-01A-11D-2167-08 TCGA-55-7910-11A-01D-2167-08 g.chr10:104404540A>T c.166A>T c.(166-168)Aac>Tac p.N56Y LUAD 10 104404673 104404673 + Missense_Mutation SNP C C T TCGA-75-6211-01A-11D-1753-08 TCGA-75-6211-10A-01D-1753-08 g.chr10:104404673C>T c.299C>T c.(298-300)cCg>cTg p.P100L LUAD 10 104404790 104404790 + Missense_Mutation SNP A A T TCGA-55-8085-01A-11D-2238-08 TCGA-55-8085-10A-01D-2238-08 g.chr10:104404790A>T c.416A>T c.(415-417)gAc>gTc p.D139V LUAD 10 104414408 104414408 + Splice_Site SNP A A G TCGA-17-Z026-01A-01W-0746-08 TCGA-17-Z026-11A-01W-0746-08 g.chr10:104414408A>G c.e2-1 LUAD 10 104414868 104414868 + Missense_Mutation SNP G G T TCGA-55-7995-01A-11D-2184-08 TCGA-55-7995-10A-01D-2184-08 g.chr10:104414868G>T c.698G>T c.(697-699)cGg>cTg p.R233L LUAD 10 104414874 104414874 + Missense_Mutation SNP A A C TCGA-MP-A4TC-01A-11D-A24P-08 TCGA-MP-A4TC-10A-01D-A24P-08 g.chr10:104414874A>C c.704A>C c.(703-705)cAg>cCg p.Q235P LUAD 10 104416717 104416717 + Missense_Mutation SNP C C G TCGA-55-7570-01A-11D-2036-08 TCGA-55-7570-10A-01D-2036-08 g.chr10:104416717C>G c.1262C>G c.(1261-1263)tCc>tGc p.S421C LUAD 10 104416839 104416839 + Missense_Mutation SNP G G T TCGA-55-7911-01A-11D-2167-08 TCGA-55-7911-10A-01D-2167-08 g.chr10:104416839G>T c.1384G>T c.(1384-1386)Ggc>Tgc p.G462C LUAD 10 104417001 104417001 + Missense_Mutation SNP C C T TCGA-MP-A4TF-01A-11D-A25L-08 TCGA-MP-A4TF-10A-01D-A25L-08 g.chr10:104417001C>T c.1546C>T c.(1546-1548)Ctt>Ttt p.L516F LUSC 10 104404661 104404661 + Missense_Mutation SNP G G A TCGA-63-5131-01A-01D-1441-08 TCGA-63-5131-10A-01D-1441-08 g.chr10:104404661G>A c.287G>A c.(286-288)cGc>cAc p.R96H LUSC 10 104404932 104404932 + Missense_Mutation SNP G G C TCGA-60-2713-01A-01D-1522-08 TCGA-60-2713-11A-01D-1522-08 g.chr10:104404932G>C c.558G>C c.(556-558)agG>agC p.R186S OV 10 104417026 104417026 + Missense_Mutation SNP G G C TCGA-24-1463-01A-01W-0549-09 TCGA-24-1463-10A-01W-0549-09 g.chr10:104417026G>C c.1571G>C c.(1570-1572)tGg>tCg p.W524S PAAD 10 104416127 104416127 + Missense_Mutation SNP C C T TCGA-IB-7651-01A-11D-2154-08 TCGA-IB-7651-10A-01D-2154-08 g.chr10:104416127C>T c.1033C>T c.(1033-1035)Cgg>Tgg p.R345W PRAD 10 104414440 104414440 + Missense_Mutation SNP G G A TCGA-HC-A8D1-01A-11D-A364-08 TCGA-HC-A8D1-10A-01D-A362-08 g.chr10:104414440G>A c.601G>A c.(601-603)Gag>Aag p.E201K PRAD 10 104414839 104414839 + Silent SNP G G A TCGA-SU-A7E7-01A-22D-A33T-08 TCGA-SU-A7E7-10A-01D-A33W-08 g.chr10:104414839G>A c.669G>A c.(667-669)gaG>gaA p.E223E PRAD 10 104416970 104416970 + Silent SNP G G A TCGA-XK-AAIW-01A-11D-A41K-08 TCGA-XK-AAIW-10A-01D-A41N-08 g.chr10:104416970G>A c.1515G>A c.(1513-1515)ccG>ccA p.P505P SKCM 10 104404680 104404680 + Silent SNP C C T TCGA-FW-A3R5-06A-11D-A23B-08 TCGA-FW-A3R5-10A-01D-A23B-08 g.chr10:104404680C>T c.306C>T c.(304-306)ccC>ccT p.P102P SKCM 10 104414852 104414852 + Silent SNP C C T TCGA-EE-A3JI-06A-11D-A21A-08 TCGA-EE-A3JI-10A-01D-A21A-08 g.chr10:104414852C>T c.682C>T c.(682-684)Ctg>Ttg p.L228L SKCM 10 104416142 104416142 + Splice_Site SNP G G A TCGA-EE-A3AE-06A-11D-A196-08 TCGA-EE-A3AE-10A-01D-A198-08 g.chr10:104416142G>A c.1048G>A c.(1048-1050)Ggc>Agc p.G350S SKCM 10 104416543 104416543 + Missense_Mutation SNP C C T TCGA-EE-A2GP-06A-11D-A197-08 TCGA-EE-A2GP-10A-01D-A199-08 g.chr10:104416543C>T c.1088C>T c.(1087-1089)cCc>cTc p.P363L SKCM 10 104416605 104416605 + Missense_Mutation SNP C C T TCGA-GN-A266-06A-11D-A197-08 TCGA-GN-A266-10A-01D-A199-08 g.chr10:104416605C>T c.1150C>T c.(1150-1152)Cca>Tca p.P384S SKCM 10 104416920 104416920 + Missense_Mutation SNP C C T TCGA-EE-A29L-06A-12D-A196-08 TCGA-EE-A29L-10A-01D-A198-08 g.chr10:104416920C>T c.1465C>T c.(1465-1467)Cgc>Tgc p.R489C SKCM 10 104416968 104416968 + Missense_Mutation SNP C C T TCGA-EE-A29H-06A-12D-A197-08 TCGA-EE-A29H-10A-01D-A199-08 g.chr10:104416968C>T c.1513C>T c.(1513-1515)Ccg>Tcg p.P505S SKCM 10 104416969 104416969 + Missense_Mutation SNP C C T TCGA-EE-A29H-06A-12D-A197-08 TCGA-EE-A29H-10A-01D-A199-08 g.chr10:104416969C>T c.1514C>T c.(1513-1515)cCg>cTg p.P505L

Mutation - ICGC Project Code Chromosome Chromosome Start Chromosome End Mutation Type Mutated from Allele Mutated to Allele Consequence Type AA Mutation CDS Mutation BLCA-CN 10 104416832 104416832 single base substitution G T downstream_gene_variant BLCA-CN 10 104416832 104416832 single base substitution G T exon_variant BLCA-CN 10 104416832 104416832 single base substitution G T missense_variant Q459H 1377G>T BLCA-US 10 104404923 104404923 single base substitution G T missense_variant E183D 549G>T BLCA-US 10 104404923 104404923 single base substitution G T missense_variant E93D 279G>T BLCA-US 10 104404923 104404923 single base substitution G T upstream_gene_variant BRCA-EU 10 104402719 104402719 single base substitution G A upstream_gene_variant BRCA-EU 10 104403754 104403754 single base substitution C T upstream_gene_variant BRCA-EU 10 104404356 104404356 single base substitution C G 5_prime_UTR_variant BRCA-EU 10 104404356 104404356 single base substitution C G upstream_gene_variant BRCA-EU 10 104404734 104404734 single base substitution G C missense_variant Q120H 360G>C BRCA-EU 10 104404734 104404734 single base substitution G C missense_variant Q30H 90G>C BRCA-EU 10 104404734 104404734 single base substitution G C upstream_gene_variant BRCA-EU 10 104407785 104407785 single base substitution G A intron_variant BRCA-EU 10 104407785 104407785 single base substitution G A upstream_gene_variant BRCA-EU 10 104412617 104412617 single base substitution A T intron_variant BRCA-EU 10 104412617 104412617 single base substitution A T upstream_gene_variant BRCA-EU 10 104412998 104412998 single base substitution C G intron_variant BRCA-EU 10 104412998 104412998 single base substitution C G upstream_gene_variant BRCA-EU 10 104413604 104413604 single base substitution C G intron_variant BRCA-EU 10 104413604 104413604 single base substitution C G upstream_gene_variant BRCA-EU 10 104414690 104414690 single base substitution G A intron_variant BRCA-EU 10 104414690 104414690 single base substitution G A upstream_gene_variant BRCA-EU 10 104414924 104414924 single base substitution G A exon_variant BRCA-EU 10 104414924 104414924 single base substitution G A missense_variant E130K 388G>A BRCA-EU 10 104414924 104414924 single base substitution G A missense_variant E252K 754G>A BRCA-EU 10 104414924 104414924 single base substitution G A upstream_gene_variant BRCA-EU 10 104415434 104415434 single base substitution C G intron_variant BRCA-EU 10 104416885 104416885 single base substitution C T downstream_gene_variant BRCA-EU 10 104416885 104416885 single base substitution C T missense_variant S477F 1430C>T BRCA-EU 10 104417899 104417899 single base substitution G T 3_prime_UTR_variant BRCA-EU 10 104417899 104417899 single base substitution G T downstream_gene_variant BRCA-EU 10 104418030 104418030 single base substitution A G 3_prime_UTR_variant BRCA-EU 10 104418030 104418030 single base substitution A G downstream_gene_variant BRCA-EU 10 104418807 104418807 single base substitution C T downstream_gene_variant BRCA-EU 10 104419082 104419082 single base substitution A C downstream_gene_variant BRCA-EU 10 104419196 104419196 single base substitution C G downstream_gene_variant BRCA-EU 10 104419197 104419197 single base substitution C T downstream_gene_variant BRCA-EU 10 104419212 104419212 single base substitution G A downstream_gene_variant BRCA-EU 10 104419374 104419374 single base substitution C T downstream_gene_variant BRCA-EU 10 104421416 104421417 deletion of <=200bp AC - downstream_gene_variant BRCA-FR 10 104399821 104399821 single base substitution C T upstream_gene_variant BRCA-FR 10 104407671 104407671 single base substitution C A intron_variant BRCA-FR 10 104407671 104407671 single base substitution C A upstream_gene_variant BRCA-FR 10 104418807 104418807 single base substitution C T downstream_gene_variant BRCA-UK 10 104403045 104403045 single base substitution C G upstream_gene_variant BRCA-UK 10 104410350 104410350 single base substitution C G intron_variant BRCA-UK 10 104410350 104410350 single base substitution C G upstream_gene_variant BRCA-US 10 104404572 104404572 single base substitution G A synonymous_variant E66E 198G>A BRCA-US 10 104404572 104404572 single base substitution G A upstream_gene_variant BRCA-US 10 104416924 104416924 single base substitution C G downstream_gene_variant BRCA-US 10 104416924 104416924 single base substitution C G missense_variant S490C 1469C>G BTCA-JP 10 104404661 104404661 single base substitution G C missense_variant R6P 17G>C BTCA-JP 10 104404661 104404661 single base substitution G C missense_variant R96P 287G>C BTCA-JP 10 104404661 104404661 single base substitution G C upstream_gene_variant BTCA-JP 10 104404681 104404681 single base substitution G C missense_variant A103P 307G>C BTCA-JP 10 104404681 104404681 single base substitution G C missense_variant A13P 37G>C BTCA-JP 10 104404681 104404681 single base substitution G C upstream_gene_variant BTCA-JP 10 104404683 104404683 single base substitution G C synonymous_variant A103A 309G>C BTCA-JP 10 104404683 104404683 single base substitution G C synonymous_variant A13A 39G>C BTCA-JP 10 104404683 104404683 single base substitution G C upstream_gene_variant BTCA-JP 10 104404798 104404798 single base substitution G A missense_variant A142T 424G>A BTCA-JP 10 104404798 104404798 single base substitution G A missense_variant A52T 154G>A BTCA-JP 10 104404798 104404798 single base substitution G A upstream_gene_variant BTCA-JP 10 104404830 104404830 single base substitution C T synonymous_variant R152R 456C>T BTCA-JP 10 104404830 104404830 single base substitution C T synonymous_variant R62R 186C>T BTCA-JP 10 104404830 104404830 single base substitution C T upstream_gene_variant BTCA-JP 10 104416011 104416011 insertion of <=200bp - CGTCCACTG exon_variant BTCA-JP 10 104416011 104416011 insertion of <=200bp - CGTCCACTG intron_variant BTCA-JP 10 104416951 104416951 single base substitution C T downstream_gene_variant BTCA-JP 10 104416951 104416951 single base substitution C T missense_variant S499L 1496C>T CLLE-ES 10 104415398 104415398 single base substitution C G intron_variant CLLE-ES 10 104423143 104423151 deletion of <=200bp AAATAAAAT - downstream_gene_variant COAD-US 10 104414434 104414434 single base substitution C T exon_variant COAD-US 10 104414434 104414434 single base substitution C T intron_variant COAD-US 10 104414434 104414434 single base substitution C T missense_variant R199W 595C>T COAD-US 10 104414434 104414434 single base substitution C T upstream_gene_variant COAD-US 10 104416664 104416664 single base substitution G T exon_variant COAD-US 10 104416664 104416664 single base substitution G T synonymous_variant A281A 843G>T COAD-US 10 104416664 104416664 single base substitution G T synonymous_variant A403A 1209G>T COAD-US 10 104416963 104416963 single base substitution C G downstream_gene_variant COAD-US 10 104416963 104416963 single base substitution C G stop_gained S503* 1508C>G COAD-US 10 104416989 104416989 single base substitution G A downstream_gene_variant COAD-US 10 104416989 104416989 single base substitution G A missense_variant V512I 1534G>A COCA-CN 10 104404281 104404281 single base substitution A C 5_prime_UTR_variant COCA-CN 10 104404281 104404281 single base substitution A C upstream_gene_variant COCA-CN 10 104404509 104404509 single base substitution G T missense_variant K45N 135G>T COCA-CN 10 104404509 104404509 single base substitution G T upstream_gene_variant COCA-CN 10 104404955 104404955 single base substitution T C intron_variant COCA-CN 10 104404955 104404955 single base substitution T C upstream_gene_variant COCA-CN 10 104404968 104404968 single base substitution G A intron_variant COCA-CN 10 104404968 104404968 single base substitution G A upstream_gene_variant COCA-CN 10 104404970 104404970 single base substitution A G intron_variant COCA-CN 10 104404970 104404970 single base substitution A G upstream_gene_variant COCA-CN 10 104414709 104414709 single base substitution C A intron_variant COCA-CN 10 104414709 104414709 single base substitution C A upstream_gene_variant COCA-CN 10 104414959 104414959 single base substitution C T exon_variant COCA-CN 10 104414959 104414959 single base substitution C T synonymous_variant S141S 423C>T COCA-CN 10 104414959 104414959 single base substitution C T synonymous_variant S263S 789C>T COCA-CN 10 104414959 104414959 single base substitution C T upstream_gene_variant COCA-CN 10 104422543 104422543 single base substitution A G downstream_gene_variant ESAD-UK 10 104399624 104399624 single base substitution G A upstream_gene_variant ESAD-UK 10 104399681 104399681 single base substitution G A upstream_gene_variant ESAD-UK 10 104402426 104402426 single base substitution G T upstream_gene_variant ESAD-UK 10 104404130 104404130 single base substitution C T upstream_gene_variant ESAD-UK 10 104404226 104404226 single base substitution C T upstream_gene_variant ESAD-UK 10 104405343 104405343 single base substitution C G intron_variant ESAD-UK 10 104405343 104405343 single base substitution C G upstream_gene_variant ESAD-UK 10 104405551 104405551 single base substitution A T intron_variant ESAD-UK 10 104405551 104405551 single base substitution A T upstream_gene_variant ESAD-UK 10 104405600 104405600 insertion of <=200bp - GC intron_variant ESAD-UK 10 104405600 104405600 insertion of <=200bp - GC upstream_gene_variant ESAD-UK 10 104408123 104408123 single base substitution A G intron_variant ESAD-UK 10 104408123 104408123 single base substitution A G upstream_gene_variant ESAD-UK 10 104412798 104412798 single base substitution C T intron_variant ESAD-UK 10 104412798 104412798 single base substitution C T upstream_gene_variant ESAD-UK 10 104414392 104414392 single base substitution A G intron_variant ESAD-UK 10 104414392 104414392 single base substitution A G upstream_gene_variant ESAD-UK 10 104421393 104421393 single base substitution C A downstream_gene_variant GBM-US 10 104404874 104404874 single base substitution G A missense_variant C167Y 500G>A GBM-US 10 104404874 104404874 single base substitution G A missense_variant C77Y 230G>A GBM-US 10 104404874 104404874 single base substitution G A upstream_gene_variant KIRC-US 10 104404879 104404879 single base substitution T C missense_variant Y169H 505T>C KIRC-US 10 104404879 104404879 single base substitution T C missense_variant Y79H 235T>C KIRC-US 10 104404879 104404879 single base substitution T C upstream_gene_variant KIRP-US 10 104404529 104404529 single base substitution G C missense_variant C52S 155G>C KIRP-US 10 104404529 104404529 single base substitution G C upstream_gene_variant KIRP-US 10 104404881 104404881 single base substitution C T synonymous_variant Y169Y 507C>T KIRP-US 10 104404881 104404881 single base substitution C T synonymous_variant Y79Y 237C>T KIRP-US 10 104404881 104404881 single base substitution C T upstream_gene_variant KIRP-US 10 104415049 104415049 single base substitution G A exon_variant KIRP-US 10 104415049 104415049 single base substitution G A synonymous_variant T171T 513G>A KIRP-US 10 104415049 104415049 single base substitution G A synonymous_variant T293T 879G>A KIRP-US 10 104416093 104416093 single base substitution C A exon_variant KIRP-US 10 104416093 104416093 single base substitution C A missense_variant F211L 633C>A KIRP-US 10 104416093 104416093 single base substitution C A missense_variant F333L 999C>A LICA-CN 10 104416141 104416141 single base substitution A T missense_variant E227D 681A>T LICA-CN 10 104416141 104416141 single base substitution A T missense_variant E349D 1047A>T LICA-CN 10 104416141 104416141 single base substitution A T splice_region_variant LICA-FR 10 104416644 104416644 single base substitution G T exon_variant LICA-FR 10 104416644 104416644 single base substitution G T missense_variant G275C 823G>T LICA-FR 10 104416644 104416644 single base substitution G T missense_variant G397C 1189G>T LICA-FR 10 104417098 104417115 deletion of <=200bp ACGTGACGAGCTAACGCC - downstream_gene_variant LICA-FR 10 104417098 104417115 deletion of <=200bp ACGTGACGAGCTAACGCC - stop_lost YVTS*548? LICA-FR 10 104419648 104419648 deletion of <=200bp A - downstream_gene_variant LINC-JP 10 104404505 104404505 single base substitution C T missense_variant A44V 131C>T LINC-JP 10 104404505 104404505 single base substitution C T upstream_gene_variant LINC-JP 10 104404514 104404514 single base substitution G A missense_variant S47N 140G>A LINC-JP 10 104404514 104404514 single base substitution G A upstream_gene_variant LINC-JP 10 104404661 104404661 single base substitution G C missense_variant R6P 17G>C LINC-JP 10 104404661 104404661 single base substitution G C missense_variant R96P 287G>C LINC-JP 10 104404661 104404661 single base substitution G C upstream_gene_variant LINC-JP 10 104404681 104404681 single base substitution G C missense_variant A103P 307G>C LINC-JP 10 104404681 104404681 single base substitution G C missense_variant A13P 37G>C LINC-JP 10 104404681 104404681 single base substitution G C upstream_gene_variant LINC-JP 10 104404683 104404683 single base substitution G C synonymous_variant A103A 309G>C LINC-JP 10 104404683 104404683 single base substitution G C synonymous_variant A13A 39G>C LINC-JP 10 104404683 104404683 single base substitution G C upstream_gene_variant LINC-JP 10 104404848 104404848 single base substitution C G synonymous_variant A158A 474C>G LINC-JP 10 104404848 104404848 single base substitution C G synonymous_variant A68A 204C>G LINC-JP 10 104404848 104404848 single base substitution C G upstream_gene_variant LINC-JP 10 104405445 104405445 deletion of <=200bp G - intron_variant LINC-JP 10 104405445 104405445 deletion of <=200bp G - upstream_gene_variant LINC-JP 10 104409776 104409776 deletion of <=200bp T - intron_variant LINC-JP 10 104409777 104409777 single base substitution T C intron_variant LINC-JP 10 104414626 104414626 single base substitution A G intron_variant LINC-JP 10 104414626 104414626 single base substitution A G upstream_gene_variant LINC-JP 10 104414775 104414775 single base substitution G A intron_variant LINC-JP 10 104414775 104414775 single base substitution G A upstream_gene_variant LINC-JP 10 104417298 104417298 single base substitution T C 3_prime_UTR_variant LINC-JP 10 104417298 104417298 single base substitution T C downstream_gene_variant LIRI-JP 10 104399564 104399564 single base substitution G A upstream_gene_variant LIRI-JP 10 104400576 104400576 single base substitution C T upstream_gene_variant LIRI-JP 10 104407530 104407530 single base substitution G A intron_variant LIRI-JP 10 104407530 104407530 single base substitution G A upstream_gene_variant LIRI-JP 10 104413855 104413855 single base substitution A G intron_variant LIRI-JP 10 104413855 104413855 single base substitution A G upstream_gene_variant LIRI-JP 10 104422724 104422724 single base substitution C T downstream_gene_variant LUSC-KR 10 104402743 104402743 single base substitution T A upstream_gene_variant LUSC-KR 10 104407189 104407189 single base substitution G A intron_variant LUSC-KR 10 104407189 104407189 single base substitution G A upstream_gene_variant LUSC-KR 10 104412795 104412795 single base substitution A G intron_variant LUSC-KR 10 104412795 104412795 single base substitution A G upstream_gene_variant LUSC-KR 10 104418755 104418755 single base substitution C T downstream_gene_variant LUSC-KR 10 104418756 104418756 single base substitution G T downstream_gene_variant LUSC-KR 10 104418999 104418999 single base substitution G C downstream_gene_variant LUSC-KR 10 104420958 104420958 single base substitution G C downstream_gene_variant LUSC-US 10 104404661 104404661 single base substitution G A missense_variant R6H 17G>A LUSC-US 10 104404661 104404661 single base substitution G A missense_variant R96H 287G>A LUSC-US 10 104404661 104404661 single base substitution G A upstream_gene_variant LUSC-US 10 104404932 104404932 single base substitution G C missense_variant R186S 558G>C LUSC-US 10 104404932 104404932 single base substitution G C missense_variant R96S 288G>C LUSC-US 10 104404932 104404932 single base substitution G C upstream_gene_variant MALY-DE 10 104405463 104405463 single base substitution G A intron_variant MALY-DE 10 104405463 104405463 single base substitution G A upstream_gene_variant MALY-DE 10 104407611 104407611 single base substitution G A intron_variant MALY-DE 10 104407611 104407611 single base substitution G A upstream_gene_variant MALY-DE 10 104418013 104418013 single base substitution C A 3_prime_UTR_variant MALY-DE 10 104418013 104418013 single base substitution C A downstream_gene_variant MALY-DE 10 104418725 104418725 single base substitution A C downstream_gene_variant MELA-AU 10 104399574 104399574 single base substitution G T upstream_gene_variant MELA-AU 10 104399926 104399926 single base substitution C T upstream_gene_variant MELA-AU 10 104399997 104399997 single base substitution G A upstream_gene_variant MELA-AU 10 104400530 104400530 single base substitution G A upstream_gene_variant MELA-AU 10 104401094 104401094 single base substitution C T upstream_gene_variant MELA-AU 10 104401806 104401806 single base substitution A C upstream_gene_variant MELA-AU 10 104401937 104401937 single base substitution G A upstream_gene_variant MELA-AU 10 104401939 104401939 single base substitution G A upstream_gene_variant MELA-AU 10 104402016 104402016 single base substitution G A upstream_gene_variant MELA-AU 10 104402037 104402037 single base substitution C T upstream_gene_variant MELA-AU 10 104402045 104402045 single base substitution C T upstream_gene_variant MELA-AU 10 104402065 104402065 single base substitution C T upstream_gene_variant MELA-AU 10 104402521 104402521 single base substitution G A upstream_gene_variant MELA-AU 10 104403404 104403404 single base substitution C T upstream_gene_variant MELA-AU 10 104404753 104404753 single base substitution T G missense_variant S127A 379T>G MELA-AU 10 104404753 104404753 single base substitution T G missense_variant S37A 109T>G MELA-AU 10 104404753 104404753 single base substitution T G upstream_gene_variant MELA-AU 10 104405509 104405509 single base substitution C T intron_variant MELA-AU 10 104405509 104405509 single base substitution C T upstream_gene_variant MELA-AU 10 104405873 104405873 single base substitution C T intron_variant MELA-AU 10 104405873 104405873 single base substitution C T upstream_gene_variant MELA-AU 10 104406023 104406023 single base substitution G A intron_variant MELA-AU 10 104406023 104406023 single base substitution G A upstream_gene_variant MELA-AU 10 104406742 104406742 single base substitution C T intron_variant MELA-AU 10 104406742 104406742 single base substitution C T upstream_gene_variant MELA-AU 10 104407152 104407152 single base substitution C T intron_variant MELA-AU 10 104407152 104407152 single base substitution C T upstream_gene_variant MELA-AU 10 104407474 104407474 single base substitution G A intron_variant MELA-AU 10 104407474 104407474 single base substitution G A upstream_gene_variant MELA-AU 10 104408623 104408623 single base substitution C T intron_variant MELA-AU 10 104408623 104408623 single base substitution C T upstream_gene_variant MELA-AU 10 104408636 104408636 single base substitution C T intron_variant MELA-AU 10 104408636 104408636 single base substitution C T upstream_gene_variant MELA-AU 10 104409878 104409878 single base substitution C T intron_variant MELA-AU 10 104410829 104410829 single base substitution C T intron_variant MELA-AU 10 104410829 104410829 single base substitution C T upstream_gene_variant MELA-AU 10 104410981 104410981 single base substitution C T intron_variant MELA-AU 10 104410981 104410981 single base substitution C T upstream_gene_variant MELA-AU 10 104411272 104411272 single base substitution C T intron_variant MELA-AU 10 104411272 104411272 single base substitution C T upstream_gene_variant MELA-AU 10 104412236 104412236 single base substitution T G intron_variant MELA-AU 10 104412236 104412236 single base substitution T G upstream_gene_variant MELA-AU 10 104412964 104412965 multiple base substitution (>=2bp and <=200bp) CC TT intron_variant MELA-AU 10 104412964 104412965 multiple base substitution (>=2bp and <=200bp) CC TT upstream_gene_variant MELA-AU 10 104413418 104413418 single base substitution C T intron_variant MELA-AU 10 104413418 104413418 single base substitution C T upstream_gene_variant MELA-AU 10 104413992 104413992 single base substitution G A intron_variant MELA-AU 10 104413992 104413992 single base substitution G A upstream_gene_variant MELA-AU 10 104414243 104414243 single base substitution G A intron_variant MELA-AU 10 104414243 104414243 single base substitution G A upstream_gene_variant MELA-AU 10 104414618 104414618 single base substitution G T intron_variant MELA-AU 10 104414618 104414618 single base substitution G T upstream_gene_variant MELA-AU 10 104414983 104414983 single base substitution C T exon_variant MELA-AU 10 104414983 104414983 single base substitution C T synonymous_variant H149H 447C>T MELA-AU 10 104414983 104414983 single base substitution C T synonymous_variant H271H 813C>T MELA-AU 10 104414983 104414983 single base substitution C T upstream_gene_variant MELA-AU 10 104415285 104415285 single base substitution G A intron_variant MELA-AU 10 104415850 104415850 single base substitution C T intron_variant MELA-AU 10 104416059 104416059 single base substitution C T exon_variant MELA-AU 10 104416059 104416059 single base substitution C T missense_variant P200L 599C>T MELA-AU 10 104416059 104416059 single base substitution C T missense_variant P322L 965C>T MELA-AU 10 104416096 104416096 single base substitution G A exon_variant MELA-AU 10 104416096 104416096 single base substitution G A synonymous_variant L212L 636G>A MELA-AU 10 104416096 104416096 single base substitution G A synonymous_variant L334L 1002G>A MELA-AU 10 104416210 104416210 single base substitution C T intron_variant MELA-AU 10 104416920 104416920 single base substitution C T downstream_gene_variant MELA-AU 10 104416920 104416920 single base substitution C T missense_variant R489C 1465C>T MELA-AU 10 104417523 104417523 single base substitution C T 3_prime_UTR_variant MELA-AU 10 104417523 104417523 single base substitution C T downstream_gene_variant MELA-AU 10 104418101 104418101 single base substitution C T 3_prime_UTR_variant MELA-AU 10 104418101 104418101 single base substitution C T downstream_gene_variant MELA-AU 10 104418528 104418528 single base substitution G A downstream_gene_variant MELA-AU 10 104418604 104418604 single base substitution C T downstream_gene_variant MELA-AU 10 104419365 104419366 multiple base substitution (>=2bp and <=200bp) CC TT downstream_gene_variant MELA-AU 10 104420737 104420738 multiple base substitution (>=2bp and <=200bp) CC TT downstream_gene_variant MELA-AU 10 104420910 104420910 single base substitution C T downstream_gene_variant MELA-AU 10 104421240 104421240 single base substitution C T downstream_gene_variant MELA-AU 10 104421967 104421967 single base substitution C T downstream_gene_variant MELA-AU 10 104422182 104422182 single base substitution C T downstream_gene_variant ORCA-IN 10 104410200 104410200 single base substitution C A intron_variant ORCA-IN 10 104410200 104410200 single base substitution C A upstream_gene_variant ORCA-IN 10 104412401 104412401 single base substitution G A intron_variant ORCA-IN 10 104412401 104412401 single base substitution G A upstream_gene_variant OV-AU 10 104408704 104408704 single base substitution G A intron_variant OV-AU 10 104408704 104408704 single base substitution G A upstream_gene_variant OV-AU 10 104416164 104416164 single base substitution G A intron_variant OV-AU 10 104417913 104417913 single base substitution C A 3_prime_UTR_variant OV-AU 10 104417913 104417913 single base substitution C A downstream_gene_variant OV-US 10 104417026 104417026 single base substitution G C downstream_gene_variant OV-US 10 104417026 104417026 single base substitution G C missense_variant W524S 1571G>C PACA-AU 10 104403927 104403927 insertion of <=200bp - GCCGCCGCT upstream_gene_variant PACA-AU 10 104405604 104405604 single base substitution G A intron_variant PACA-AU 10 104405604 104405604 single base substitution G A upstream_gene_variant PACA-AU 10 104408035 104408035 single base substitution C A intron_variant PACA-AU 10 104408035 104408035 single base substitution C A upstream_gene_variant PACA-AU 10 104410161 104410161 single base substitution C T intron_variant PACA-AU 10 104410161 104410161 single base substitution C T upstream_gene_variant PACA-AU 10 104410176 104410176 single base substitution G C intron_variant PACA-AU 10 104410176 104410176 single base substitution G C upstream_gene_variant PACA-AU 10 104410177 104410177 single base substitution C T intron_variant PACA-AU 10 104410177 104410177 single base substitution C T upstream_gene_variant PACA-AU 10 104411724 104411724 single base substitution G A intron_variant PACA-AU 10 104411724 104411724 single base substitution G A upstream_gene_variant PACA-AU 10 104416177 104416177 single base substitution G T intron_variant PACA-AU 10 104416778 104416778 deletion of <=200bp C - downstream_gene_variant PACA-AU 10 104416778 104416778 deletion of <=200bp C - exon_variant PACA-AU 10 104416778 104416778 deletion of <=200bp C - frameshift_variant F441 PACA-AU 10 104419462 104419462 single base substitution A G downstream_gene_variant PACA-CA 10 104399541 104399541 single base substitution A G upstream_gene_variant PACA-CA 10 104399733 104399733 single base substitution G A upstream_gene_variant PACA-CA 10 104405357 104405357 single base substitution T A intron_variant PACA-CA 10 104405357 104405357 single base substitution T A upstream_gene_variant PACA-CA 10 104406974 104406974 single base substitution G A intron_variant PACA-CA 10 104406974 104406974 single base substitution G A upstream_gene_variant PACA-CA 10 104410395 104410395 single base substitution C T intron_variant PACA-CA 10 104410395 104410395 single base substitution C T upstream_gene_variant PACA-CA 10 104411975 104411975 single base substitution G T intron_variant PACA-CA 10 104411975 104411975 single base substitution G T upstream_gene_variant PACA-CA 10 104415780 104415780 single base substitution G T intron_variant PAEN-AU 10 104407304 104407304 single base substitution T G intron_variant PAEN-AU 10 104407304 104407304 single base substitution T G upstream_gene_variant PAEN-AU 10 104414680 104414680 single base substitution T C intron_variant PAEN-AU 10 104414680 104414680 single base substitution T C upstream_gene_variant PAEN-IT 10 104401454 104401454 single base substitution C A upstream_gene_variant PBCA-DE 10 104399293 104399293 insertion of <=200bp - A upstream_gene_variant PBCA-DE 10 104418241 104418241 single base substitution C G downstream_gene_variant PBCA-DE 10 104418769 104418769 single base substitution T A downstream_gene_variant PBCA-DE 10 104420636 104420636 deletion of <=200bp G - downstream_gene_variant PBCA-DE 10 104423090 104423090 single base substitution T A downstream_gene_variant PBCA-DE 10 104423091 104423091 single base substitution A T downstream_gene_variant PBCA-DE 10 104423156 104423156 single base substitution A T downstream_gene_variant PRAD-CA 10 104406399 104406399 single base substitution G A intron_variant PRAD-CA 10 104406399 104406399 single base substitution G A upstream_gene_variant PRAD-CA 10 104408267 104408267 single base substitution G C intron_variant PRAD-CA 10 104408267 104408267 single base substitution G C upstream_gene_variant PRAD-CA 10 104423076 104423076 single base substitution T A downstream_gene_variant PRAD-CA 10 104423077 104423077 single base substitution A T downstream_gene_variant PRAD-CA 10 104423090 104423090 single base substitution T A downstream_gene_variant PRAD-CA 10 104423091 104423091 single base substitution A T downstream_gene_variant PRAD-CA 10 104423155 104423155 single base substitution T A downstream_gene_variant PRAD-CA 10 104423156 104423156 single base substitution A T downstream_gene_variant PRAD-UK 10 104400274 104400274 single base substitution C T upstream_gene_variant PRAD-UK 10 104401424 104401424 single base substitution A C upstream_gene_variant PRAD-UK 10 104403670 104403670 single base substitution C A upstream_gene_variant PRAD-UK 10 104405200 104405200 deletion of <=200bp C - intron_variant PRAD-UK 10 104405200 104405200 deletion of <=200bp C - upstream_gene_variant PRAD-UK 10 104405420 104405420 single base substitution T G intron_variant PRAD-UK 10 104405420 104405420 single base substitution T G upstream_gene_variant PRAD-UK 10 104409421 104409421 single base substitution C T intron_variant PRAD-UK 10 104416271 104416271 single base substitution T G intron_variant RECA-EU 10 104410551 104410551 single base substitution G C intron_variant RECA-EU 10 104410551 104410551 single base substitution G C upstream_gene_variant RECA-EU 10 104412224 104412224 single base substitution G C intron_variant RECA-EU 10 104412224 104412224 single base substitution G C upstream_gene_variant RECA-EU 10 104415737 104415737 single base substitution G A intron_variant RECA-EU 10 104415740 104415740 single base substitution C T intron_variant RECA-EU 10 104420587 104420587 single base substitution G T downstream_gene_variant RECA-EU 10 104422543 104422543 single base substitution A G downstream_gene_variant RECA-EU 10 104422950 104422950 single base substitution G T downstream_gene_variant SKCA-BR 10 104401937 104401937 single base substitution G A upstream_gene_variant SKCA-BR 10 104402009 104402009 single base substitution G A upstream_gene_variant SKCA-BR 10 104402045 104402045 single base substitution C T upstream_gene_variant SKCA-BR 10 104403310 104403310 single base substitution A G upstream_gene_variant SKCA-BR 10 104410786 104410786 single base substitution C T intron_variant SKCA-BR 10 104410786 104410786 single base substitution C T upstream_gene_variant SKCA-BR 10 104415721 104415721 single base substitution A C intron_variant SKCA-BR 10 104416508 104416508 single base substitution C T exon_variant SKCA-BR 10 104416508 104416508 single base substitution C T synonymous_variant P229P 687C>T SKCA-BR 10 104416508 104416508 single base substitution C T synonymous_variant P351P 1053C>T SKCA-BR 10 104416702 104416702 single base substitution T C exon_variant SKCA-BR 10 104416702 104416702 single base substitution T C missense_variant L294P 881T>C SKCA-BR 10 104416702 104416702 single base substitution T C missense_variant L416P 1247T>C SKCA-BR 10 104419492 104419492 single base substitution T C downstream_gene_variant SKCA-BR 10 104420754 104420754 single base substitution C T downstream_gene_variant SKCA-BR 10 104421228 104421228 single base substitution T G downstream_gene_variant SKCA-BR 10 104423072 104423072 insertion of <=200bp - TA downstream_gene_variant SKCA-BR 10 104423121 104423121 insertion of <=200bp - AAAAAT downstream_gene_variant SKCA-BR 10 104423150 104423150 single base substitution A T downstream_gene_variant SKCA-BR 10 104423151 104423151 single base substitution T A downstream_gene_variant SKCM-US 10 104404680 104404680 single base substitution C T synonymous_variant P102P 306C>T SKCM-US 10 104404680 104404680 single base substitution C T synonymous_variant P12P 36C>T SKCM-US 10 104404680 104404680 single base substitution C T upstream_gene_variant SKCM-US 10 104414852 104414852 single base substitution C T exon_variant SKCM-US 10 104414852 104414852 single base substitution C T synonymous_variant L106L 316C>T SKCM-US 10 104414852 104414852 single base substitution C T synonymous_variant L228L 682C>T SKCM-US 10 104414852 104414852 single base substitution C T upstream_gene_variant SKCM-US 10 104416142 104416142 single base substitution G A missense_variant G228S 682G>A SKCM-US 10 104416142 104416142 single base substitution G A missense_variant G350S 1048G>A SKCM-US 10 104416142 104416142 single base substitution G A splice_region_variant SKCM-US 10 104416543 104416543 single base substitution C T exon_variant SKCM-US 10 104416543 104416543 single base substitution C T missense_variant P241L 722C>T SKCM-US 10 104416543 104416543 single base substitution C T missense_variant P363L 1088C>T SKCM-US 10 104416605 104416605 single base substitution C T exon_variant SKCM-US 10 104416605 104416605 single base substitution C T missense_variant P262S 784C>T SKCM-US 10 104416605 104416605 single base substitution C T missense_variant P384S 1150C>T SKCM-US 10 104416920 104416920 single base substitution C T downstream_gene_variant SKCM-US 10 104416920 104416920 single base substitution C T missense_variant R489C 1465C>T STAD-US 10 104414459 104414459 single base substitution T C exon_variant STAD-US 10 104414459 104414459 single base substitution T C intron_variant STAD-US 10 104414459 104414459 single base substitution T C missense_variant I207T 620T>C STAD-US 10 104414459 104414459 single base substitution T C upstream_gene_variant STAD-US 10 104414974 104414974 single base substitution G A exon_variant STAD-US 10 104414974 104414974 single base substitution G A synonymous_variant Q146Q 438G>A STAD-US 10 104414974 104414974 single base substitution G A synonymous_variant Q268Q 804G>A STAD-US 10 104414974 104414974 single base substitution G A upstream_gene_variant STAD-US 10 104415048 104415048 single base substitution C T exon_variant STAD-US 10 104415048 104415048 single base substitution C T missense_variant T171M 512C>T STAD-US 10 104415048 104415048 single base substitution C T missense_variant T293M 878C>T STAD-US 10 104415893 104415893 single base substitution A G missense_variant R189G 565A>G STAD-US 10 104415893 104415893 single base substitution A G missense_variant R311G 931A>G STAD-US 10 104415893 104415893 single base substitution A G splice_region_variant STAD-US 10 104416854 104416854 single base substitution G A downstream_gene_variant STAD-US 10 104416854 104416854 single base substitution G A missense_variant V467I 1399G>A STAD-US 10 104416988 104416988 single base substitution C T downstream_gene_variant STAD-US 10 104416988 104416988 single base substitution C T synonymous_variant S511S 1533C>T THCA-SA 10 104417379 104417379 single base substitution C T 3_prime_UTR_variant THCA-SA 10 104417379 104417379 single base substitution C T downstream_gene_variant THCA-US 10 104416787 104416787 single base substitution G A downstream_gene_variant THCA-US 10 104416787 104416787 single base substitution G A exon_variant THCA-US 10 104416787 104416787 single base substitution G A synonymous_variant S444S 1332G>A UCEC-US 10 104404546 104404546 single base substitution G T missense_variant A58S 172G>T UCEC-US 10 104404546 104404546 single base substitution G T upstream_gene_variant UCEC-US 10 104404616 104404616 single base substitution T A missense_variant L81Q 242T>A UCEC-US 10 104404616 104404616 single base substitution T A upstream_gene_variant UCEC-US 10 104414994 104414994 single base substitution G A exon_variant UCEC-US 10 104414994 104414994 single base substitution G A missense_variant R153H 458G>A UCEC-US 10 104414994 104414994 single base substitution G A missense_variant R275H 824G>A UCEC-US 10 104414994 104414994 single base substitution G A upstream_gene_variant UCEC-US 10 104416576 104416576 single base substitution C T exon_variant UCEC-US 10 104416576 104416576 single base substitution C T missense_variant A252V 755C>T UCEC-US 10 104416576 104416576 single base substitution C T missense_variant A374V 1121C>T UCEC-US 10 104416612 104416612 single base substitution C T exon_variant UCEC-US 10 104416612 104416612 single base substitution C T missense_variant A264V 791C>T UCEC-US 10 104416612 104416612 single base substitution C T missense_variant A386V 1157C>T UCEC-US 10 104416807 104416807 single base substitution C G downstream_gene_variant UCEC-US 10 104416807 104416807 single base substitution C G exon_variant UCEC-US 10 104416807 104416807 single base substitution C G missense_variant A451G 1352C>G UCEC-US 10 104416955 104416955 single base substitution G T downstream_gene_variant UCEC-US 10 104416955 104416955 single base substitution G T missense_variant Q500H 1500G>T

Mutation - COSMIC Sample Name Mutation ID Mutation CDS Mutation AA Mutation Description Mutation Genome Position Mutation Strand TCGA-AP-A051-01 COSM914250 c.1157C>T p.A386V Substitution - Missense 10:102656855-102656855 + TCGA-AD-6895-01 COSM1345498 c.1508C>G p.S503* Substitution - Nonsense 10:102657206-102657206 + TCGA-EE-A29L-06 COSM3433794 c.1465C>T p.R489C Substitution - Missense 10:102657163-102657163 + TCGA-A4-8098-01 COSM3985393 c.879G>A p.T293T Substitution - coding silent 10:102655292-102655292 + BD184T COSM5517667 c.1496C>T p.S499L Substitution - Missense 10:102657194-102657194 + TCGA-BR-7851-01 COSM4011302 c.931A>G p.R311G Substitution - Missense 10:102656136-102656136 + Pat_76_A COSM5369975 c.1430C>T p.S477F Substitution - Missense 10:102657128-102657128 + CHEWS026 COSM4573323 c.1375C>A p.Q459K Substitution - Missense 10:102657073-102657073 + TCGA-DW-7834-01 COSM3985392 c.507C>T p.Y169Y Substitution - coding silent 10:102645124-102645124 + T2197 COSM4736245 c.1447G>A p.G483S Substitution - Missense 10:102657145-102657145 + sysucc-886T COSM5766961 c.789C>T p.S263S Substitution - coding silent 10:102655202-102655202 + LC_C9 COSM1188037 c.818G>C p.G273A Substitution - Missense 10:102655231-102655231 + TCGA-HE-A5NJ-01 COSM4414479 c.999C>A p.F333L Substitution - Missense 10:102656336-102656336 + XHDG34 COSM4769437 c.957C>T p.S319S Substitution - coding silent 10:102656294-102656294 + TCGA-D1-A103-01 COSM914252 c.1500G>T p.Q500H Substitution - Missense 10:102657198-102657198 + 2_tFL COSM4170272 c.241_262del22 p.L81fs*107 Deletion - Frameshift 10:102644858-102644879 + 3N27-VS-3T27 COSM4980240 c.625G>C p.D209H Substitution - Missense 10:102654707-102654707 + HCC12T COSM1602916 c.131C>T p.A44V Substitution - Missense 10:102644748-102644748 + Pat_24_A COSM5836159 c.1086delC p.L364fs*6 Deletion - Frameshift 10:102656784-102656784 + TCGA-EE-A3JI-06 COSM3433790 c.682C>T p.L228L Substitution - coding silent 10:102655095-102655095 + PT21_2 COSM5901690 c.965C>T p.P322L Substitution - Missense 10:102656302-102656302 + PT49 COSM5935652 c.1481C>T p.P494L Substitution - Missense 10:102657179-102657179 + HCA7 COSM4629626 c.1388G>A p.R463H Substitution - Missense 10:102657086-102657086 + BD197T COSM3746201 c.307G>C p.A103P Substitution - Missense 10:102644924-102644924 + QC2-42-T2 COSM5656235 c.270G>C p.L90L Substitution - coding silent 10:102644887-102644887 + cSCCP7 COSM139858 c.1544C>T p.S515F Substitution - Missense 10:102657242-102657242 + 19 COSM5747180 c.1177T>C p.S393P Substitution - Missense 10:102656875-102656875 + BD166T COSM5494618 c.424G>A p.A142T Substitution - Missense 10:102645041-102645041 + TCGA-60-2713-01 COSM682391 c.558G>C p.R186S Substitution - Missense 10:102645175-102645175 + S02292 COSM914248 c.824G>A p.R275H Substitution - Missense 10:102655237-102655237 + HCC122 COSM1602917 c.474C>G p.A158A Substitution - coding silent 10:102645091-102645091 + TCGA-63-5131-01 COSM682392 c.287G>A p.R96H Substitution - Missense 10:102644904-102644904 + TCGA-CD-A4MJ-01 COSM4011299 c.620T>C p.I207T Substitution - Missense 10:102654702-102654702 + HCC12 COSM1602916 c.131C>T p.A44V Substitution - Missense 10:102644748-102644748 + 2293776 COSM4607455 c.79C>A p.Q27K Substitution - Missense 10:102644696-102644696 + CCK81 COSM2059411 c.239C>T p.A80V Substitution - Missense 10:102644856-102644856 + TCGA-D5-6928-01 COSM1240522 c.1534G>A p.V512I Substitution - Missense 10:102657232-102657232 + SB_07 COSM5753225 c.519G>A p.A173A Substitution - coding silent 10:102645136-102645136 + LUAD-QCHM7 COSM377117 c.1497G>A p.S499S Substitution - coding silent 10:102657195-102657195 + TCGA-EE-A2GP-06 COSM3433792 c.1088C>T p.P363L Substitution - Missense 10:102656786-102656786 + BD166T COSM5494642 c.456C>T p.R152R Substitution - coding silent 10:102645073-102645073 + C086 COSM5540829 c.1437C>T p.A479A Substitution - coding silent 10:102657135-102657135 + CCK81 COSM2059426 c.744G>A p.R248R Substitution - coding silent 10:102655157-102655157 + I2L-P7-Tumor-Organoid COSM5360313 c.661G>A p.V221M Substitution - Missense 10:102654743-102654743 + HN_00076 COSM129910 c.196G>C p.E66Q Substitution - Missense 10:102644813-102644813 + TCGA-CD-A4MG-01 COSM4011303 c.1399G>A p.V467I Substitution - Missense 10:102657097-102657097 + TCGA-D1-A17S-01 COSM914246 c.172G>T p.A58S Substitution - Missense 10:102644789-102644789 + TCGA-HU-A4GU-01 COSM4011301 c.878C>T p.T293M Substitution - Missense 10:102655291-102655291 + T578 COSM4736244 c.1201G>A p.G401R Substitution - Missense 10:102656899-102656899 + Pat_45_A COSM5836160 c.1142C>T p.T381M Substitution - Missense 10:102656840-102656840 + ACINAR11 COSM1732770 c.428G>C p.W143S Substitution - Missense 10:102645045-102645045 + LS411 COSM2059431 c.852C>A p.G284G Substitution - coding silent 10:102655265-102655265 + YURAY COSM5369974 c.686A>G p.K229R Substitution - Missense 10:102655099-102655099 + ESO-859 COSM1240522 c.1534G>A p.V512I Substitution - Missense 10:102657232-102657232 + TCGA-A6-6781-01 COSM1345496 c.595C>T p.R199W Substitution - Missense 10:102654677-102654677 + TCGA-AC-A23H-01 COSM3806358 c.198G>A p.E66E Substitution - coding silent 10:102644815-102644815 + T407 COSM4736246 c.1461delC p.R489fs*61 Deletion - Frameshift 10:102657159-102657159 + Au10 COSM5598896 c.1175C>T p.S392L Substitution - Missense 10:102656873-102656873 + HOP-62 COSM1675523 c.832G>C p.E278Q Substitution - Missense 10:102655245-102655245 + CCC6T COSM3746201 c.307G>C p.A103P Substitution - Missense 10:102644924-102644924 + CCK81 COSM2059435 c.1266G>T p.T422T Substitution - coding silent 10:102656964-102656964 + ESCC_108 COSM5638603 c.796G>A p.A266T Substitution - Missense 10:102655209-102655209 + HCC090T COSM5810752 c.1047A>T p.E349D Substitution - Missense 10:102656384-102656384 + TCGA-EE-A3AE-06 COSM3433791 c.1048G>A p.G350S Substitution - Missense 10:102656385-102656385 + PD14465a COSM5787016 c.754G>A p.E252K Substitution - Missense 10:102655167-102655167 + Pat_45_B COSM5836161 c.1396C>T p.L466F Substitution - Missense 10:102657094-102657094 + BD197T COSM3665460 c.309G>C p.A103A Substitution - coding silent 10:102644926-102644926 + CHC1720T COSM5347255 c.1646_1656del11 p.? Unknown B9-Tumor COSM3930902 c.1377G>T p.Q459H Substitution - Missense 10:102657075-102657075 + T613 COSM4736247 c.1512C>T p.H504H Substitution - coding silent 10:102657210-102657210 + LUAD-S00488 COSM394870 c.139A>C p.S47R Substitution - Missense 10:102644756-102644756 + TCGA-CG-5726-01 COSM4011300 c.804G>A p.Q268Q Substitution - coding silent 10:102655217-102655217 + TCGA-GN-A266-06 COSM3433793 c.1150C>T p.P384S Substitution - Missense 10:102656848-102656848 + TCGA-IA-A40Y-01 COSM3985391 c.155G>C p.C52S Substitution - Missense 10:102644772-102644772 + TCGA-B5-A0K2-01 COSM914251 c.1352C>G p.A451G Substitution - Missense 10:102657050-102657050 + CHC1604T COSM4787862 c.1189G>T p.G397C Substitution - Missense 10:102656887-102656887 + T3090 COSM4736242 c.652A>G p.K218E Substitution - Missense 10:102654734-102654734 + SNU-C2B COSM2059429 c.807G>A p.A269A Substitution - coding silent 10:102655220-102655220 + TCGA-BP-5180-01 COSM465206 c.505T>C p.Y169H Substitution - Missense 10:102645122-102645122 + CHC1604T COSM4787862 c.1189G>T p.G397C Substitution - Missense 10:102656887-102656887 + HCC122T COSM1602917 c.474C>G p.A158A Substitution - coding silent 10:102645091-102645091 + TCGA-D5-6540-01 COSM1345497 c.1209G>T p.A403A Substitution - coding silent 10:102656907-102656907 + TCGA-A2-A04W-01 COSM426993 c.1469C>G p.S490C Substitution - Missense 10:102657167-102657167 + TCGA-FK-A3SB-01 COSM2059438 c.1332G>A p.S444S Substitution - coding silent 10:102657030-102657030 + HX20T COSM3665459 c.140G>A p.S47N Substitution - Missense 10:102644757-102644757 + TCGA-FW-A3R5-06 COSM3866406 c.306C>T p.P102P Substitution - coding silent 10:102644923-102644923 + T3503 COSM4736243 c.675G>A p.V225V Substitution - coding silent 10:102655088-102655088 + CRC-06T COSM5455998 c.135G>T p.K45N Substitution - Missense 10:102644752-102644752 + BD197T COSM3746200 c.287G>C p.R96P Substitution - Missense 10:102644904-102644904 + STC252 COSM1345496 c.595C>T p.R199W Substitution - Missense 10:102654677-102654677 + CCC6T COSM3665460 c.309G>C p.A103A Substitution - coding silent 10:102644926-102644926 + S02275 COSM5682713 c.591G>T p.Q197H Substitution - Missense 10:102654673-102654673 + TCGA-14-1450-01 COSM3396888 c.500G>A p.C167Y Substitution - Missense 10:102645117-102645117 + Pat_76_B COSM5369975 c.1430C>T p.S477F Substitution - Missense 10:102657128-102657128 + ccRCC-6 COSM1664695 c.1646T>C p.V549A Substitution - Missense 10:102657344-102657344 + YUPAER COSM5369975 c.1430C>T p.S477F Substitution - Missense 10:102657128-102657128 + ESO-610 COSM1268582 c.1191C>T p.G397G Substitution - coding silent 10:102656889-102656889 + G18 COSM1191844 c.1294G>A p.A432T Substitution - Missense 10:102656992-102656992 + TCGA-BS-A0TJ-01 COSM914249 c.1121C>T p.A374V Substitution - Missense 10:102656819-102656819 + TCGA-BG-A187-01 COSM914247 c.242T>A p.L81Q Substitution - Missense 10:102644859-102644859 + CCC6T COSM3746200 c.287G>C p.R96P Substitution - Missense 10:102644904-102644904 + CCC6 COSM3665460 c.309G>C p.A103A Substitution - coding silent 10:102644926-102644926 + TCGA-GC-A3YS-01 COSM3790439 c.549G>T p.E183D Substitution - Missense 10:102645166-102645166 + TCGA-BS-A0UV-01 COSM914248 c.824G>A p.R275H Substitution - Missense 10:102655237-102655237 + TCGA-24-1463-01 COSM76825 c.1571G>C p.W524S Substitution - Missense 10:102657269-102657269 + HDC87 COSM4636803 c.312G>T p.Q104H Substitution - Missense 10:102644929-102644929 + LOVO COSM2059438 c.1332G>A p.S444S Substitution - coding silent 10:102657030-102657030 + TCGA-BR-6706-01 COSM4011304 c.1533C>T p.S511S Substitution - coding silent 10:102657231-102657231 +

Mutation - CGAP UNIGENE CYTOBAND OMIM SNP Hs.336774;Hs.336810 10q24.3 606125

Mutation - IntOGen Mutated from(ref) Mutated to(alt) Consequence Type AA Mutation CDS Mutation Chr Pos Cancer A G SpliceAcceptorSNV . c.571-2A>G 10 104414408 LUAD A G Synonymous p.Q433Q c.1299A>G 10 104416754 CM - AGTG Frameshift p.V497Sfs*31 c.1488_1489insAGTG 10 104416943 STAD CC TT Missense p.P505L c.1513_1514delinsTT 10 104416968 CM C G Missense p.A451G c.1352C>G 10 104416807 UCEC C G Missense p.S490C c.1469C>G 10 104416924 BRCA C T IntronicSNV . c.933-4C>T 10 104416023 CM C T Missense p.A374V c.1121C>T 10 104416576 UCEC C T Missense p.A403V c.1208C>T 10 104416663 HNSC C T Missense p.P100L c.299C>T 10 104404673 LUAD C T Missense p.P363L c.1088C>T 10 104416543 CM C T Missense p.P418L c.1253C>T 10 104416708 CM C T Missense p.P488L c.1463C>T 10 104416918 HNSC C T Missense p.P494S c.1480C>T 10 104416935 CM C T Missense p.R233W c.697C>T 10 104414867 CM C T Missense p.R489C c.1465C>T 10 104416920 CM C T Synonymous p.G397G c.1191C>T 10 104416646 ESCA C T Synonymous p.L228L c.682C>T 10 104414852 CM C T Synonymous p.S511S c.1533C>T 10 104416988 STAD G A 3-UTRSNV . c.1653+14G>A 10 104417122 ESCA G A Missense p.C167Y c.500G>A 10 104404874 GBM G A Missense p.D295N c.883G>A 10 104415053 CM G A Missense p.G350S c.1048G>A 10 104416142 CM G A Missense p.R96H c.287G>A 10 104404661 LUSC G A Missense p.V512I c.1534G>A 10 104416989 ESCA G A Synonymous p.Q268Q c.804G>A 10 104414974 STAD G A Synonymous p.S444S c.1332G>A 10 104416787 THCA G A Synonymous p.V305V c.915G>A 10 104415877 HNSC G A Synonymous p.V549V c.1647G>A 10 104417102 BRCA G C Missense p.E66Q c.196G>C 10 104404570 HNSC G C Missense p.R186S c.558G>C 10 104404932 LUSC G C Missense p.W524S c.1571G>C 10 104417026 OV G T Missense p.A58S c.172G>T 10 104404546 UCEC T A Missense p.L81Q c.242T>A 10 104404616 UCEC T C Missense p.Y169H c.505T>C 10 104404879 RCCC