DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome KLHL38 3'UTR 85d576c33c BA056999 NM_001081675 chr8:124727096-124727424:- KLHL38 5'UTR 85d576c33c CA088458 NM_001081675 chr8:124733063-124734371:-

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT458421 hsa-miR-486-3p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458421 hsa-miR-486-3p Homo sapiens KLHL38 340359 Homo sapiens HITS-CLIP Functional MTI (Weak) 23706177 MIRT458421 hsa-miR-486-3p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458422 hsa-miR-423-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458422 hsa-miR-423-5p Homo sapiens KLHL38 340359 Homo sapiens HITS-CLIP Functional MTI (Weak) 23706177 MIRT458422 hsa-miR-423-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458423 hsa-miR-3184-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458423 hsa-miR-3184-5p Homo sapiens KLHL38 340359 Homo sapiens HITS-CLIP Functional MTI (Weak) 23706177 MIRT458423 hsa-miR-3184-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458424 hsa-miR-873-3p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458424 hsa-miR-873-3p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458425 hsa-miR-6761-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458425 hsa-miR-6761-5p Homo sapiens KLHL38 340359 Homo sapiens HITS-CLIP Functional MTI (Weak) 23706177 MIRT458425 hsa-miR-6761-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458426 hsa-miR-6857-3p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458426 hsa-miR-6857-3p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458427 hsa-miR-6743-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458427 hsa-miR-6743-5p Homo sapiens KLHL38 340359 Homo sapiens HITS-CLIP Functional MTI (Weak) 23706177 MIRT458427 hsa-miR-6743-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458428 hsa-miR-4688 Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458428 hsa-miR-4688 Homo sapiens KLHL38 340359 Homo sapiens HITS-CLIP Functional MTI (Weak) 23706177 MIRT458428 hsa-miR-4688 Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458429 hsa-miR-6856-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458429 hsa-miR-6856-5p Homo sapiens KLHL38 340359 Homo sapiens HITS-CLIP Functional MTI (Weak) 23706177 MIRT458429 hsa-miR-6856-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458430 hsa-miR-6758-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458430 hsa-miR-6758-5p Homo sapiens KLHL38 340359 Homo sapiens HITS-CLIP Functional MTI (Weak) 23706177 MIRT458430 hsa-miR-6758-5p Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324 MIRT458431 hsa-miR-4499 Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT458431 hsa-miR-4499 Homo sapiens KLHL38 340359 Homo sapiens PAR-CLIP Functional MTI (Weak) 24398324

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004568 hsa-miR-221* 340359 KLHL38 uuuagAUGUAACAUA-CGGUCCa |:| || |:| |||||| caaaaUGCCUUCUGUCGCCAGGg 2 18 28 50 [hg19:8:124657929-124657951:-] 0.4822 125 6 -13.40 -0.3199 MIMAT0003243 hsa-miR-578 340359 KLHL38 uguuaggaucucgUGUUCUUc ||||||| --------ggucgACAAGAAa 2 9 1 13 [hg19:8:124657966-124657978:-] 0.4384 140 7 -6.28 -0.3667 MIMAT0003280 hsa-miR-612 340359 KLHL38 uuccucgagUCUUCGG--GACGGG-UCg |||| || |||||| || -ggucgacaAGAAACCUUCUGCCCUAGu 2 17 1 27 [hg19:8:124657952-124657978:-] 0.4384 123 0 -20.08 -0.2054 MIMAT0004901 hsa-miR-298 340359 KLHL38 acccucuuggagggacGAAGACGa ||||||| --ggucgacaagaaacCUUCUGCc 2 9 1 22 [hg19:8:124657957-124657978:-] 0.4384 140 7 -18.23 -0.1184 MIMAT0005926 hsa-miR-1273 340359 KLHL38 uucUUUCUCAGAACGAAACAGCGGg ||| | ||| | ||||||| gucAAAAUGCCUU-C--UGUCGCCa 2 23 26 47 [hg19:8:124657932-124657953:-] 0.4822 149 7 -16.21 -0.4175 MIMAT0016852 hsa-miR-4298 340359 KLHL38 gacggaggaGGAGGACAG-GGUc |||:||||| ||| gucaaaaugCCUUCUGUCGCCAg 2 14 26 48 [hg19:8:124657931-124657953:-] 0.4822 125 0 -25.39 -0.2464 MIMAT0003267 hsa-miR-599 340359 KLHL38 caaacuauuugaCUGUGUUg ||||||| ucugucgccaggGACACAAa 2 9 38 57 [hg19:8:124657922-124657941:-] 0.5198 140 7 -11.64 -0.1726 MIMAT0004911 hsa-miR-874 340359 KLHL38 agccaGGGAGCC--CGGUCCC-GUc ||:|| | ||||||| || aaaugCCUUCUGUCGCCAGGGACAc 2 18 30 54 [hg19:8:124657925-124657949:-] 0.4822 124 0 -22.92 -0.1829

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G060364 KLHL38 Homo sapiens 340359

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End KLHL38; C8orfK36 1 212 100 13.251 - chr8 124657766 124657978 KLHL38; C8orfK36 213 1295 62.267 13.251 - chr8 124656683 124657766 KLHL38; C8orfK36 1296 2695 0.075 13.251 - chr8 124655283 124656683

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region KLHL38 High_conserved miR-133abc chr8:124663873 7-mer-A1 60 CDS KLHL38 High_conserved miR-9/9ab chr8:124663871 8-mer 62 CDS KLHL38 High_conserved miR-96/507/1271 chr8:124664216 7-mer-A1 29 CDS KLHL38 High_conserved miR-144 chr8:124664253 7-mer-A1 16 CDS KLHL38 High_conserved miR-148ab-3p/152 chr8:124664686 7-mer-A1 13 CDS KLHL38 High_conserved miR-150/5127 chr8:124663930 7-mer-A1 60 CDS KLHL38 High_conserved miR-182 chr8:124664216 8-mer 38 CDS KLHL38 High_conserved miR-205/205ab chr8:124664646 7-mer-A1 49 CDS KLHL38 High_conserved miR-210 chr8:124658040 7-mer-A1 7 CDS KLHL38 High_conserved miR-217 chr8:124664490 7-mer-A1 24 CDS KLHL38 High_conserved miR-22/22-3p chr8:124665095 7-mer-m8 58 CDS KLHL38 High_conserved miR-223 chr8:124664860 7-mer-A1 0 CDS KLHL38 High_conserved miR-27abc/27a-3p chr8:124663881 7-mer-A1 42 CDS KLHL38 High_conserved miR-101/101ab chr8:124664253 7-mer-A1 16 CDS KLHL38 High_conserved miR-29abcd chr8:124659174 7-mer-m8 44 CDS KLHL38 High_conserved miR-31 chr8:124664218 7-mer-A1 38 CDS KLHL38 High_conserved miR-124/124ab/506 chr8:124664633 7-mer-m8 22 CDS KLHL38 High_conserved miR-338/338-3p chr8:124664055 7-mer-m8 78 CDS KLHL38 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr8:124664026 7-mer-m8 27 CDS KLHL38 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr8:124664131 8-mer 18 CDS KLHL38 High_conserved miR-455-5p chr8:124664872 8-mer 0 CDS KLHL38 High_conserved miR-490-3p chr8:124659251 7-mer-m8 31 CDS KLHL38 Medium_conserved miR-544/544ab/544-3p chr8:124663835 7-mer-m8 71 CDS KLHL38 Medium_conserved miR-592/599 chr8:124657922 8-mer 9 3pUTR KLHL38 Medium_conserved miR-758 chr8:124664111 7-mer-m8 18 CDS KLHL38 Medium_conserved miR-134/3118 chr8:124664113 8-mer 22 CDS KLHL38 Medium_conserved miR-136 chr8:124659215 8-mer 62 CDS KLHL38 Medium_conserved miR-149 chr8:124664776 7-mer-m8 51 CDS KLHL38 Medium_conserved miR-185/882/3473/4306/4644 chr8:124657780 7-mer-m8 9 3pUTR KLHL38 Medium_conserved miR-185/882/3473/4306/4644 chr8:124657792 7-mer-m8 0 3pUTR KLHL38 Medium_conserved miR-185/882/3473/4306/4644 chr8:124657808 7-mer-m8 9 3pUTR KLHL38 Medium_conserved miR-185/882/3473/4306/4644 chr8:124658010 7-mer-A1 31 CDS KLHL38 Medium_conserved miR-290-5p/292-5p/371-5p/293 chr8:124664572 7-mer-m8 49 CDS KLHL38 Medium_conserved miR-290-5p/292-5p/371-5p/293 chr8:124664803 7-mer-m8 33 CDS KLHL38 Medium_conserved miR-296-3p chr8:124664912 7-mer-m8 13 CDS KLHL38 Medium_conserved miR-324-5p chr8:124658187 7-mer-A1 67 CDS KLHL38 Medium_conserved miR-326/330/330-5p chr8:124664671 7-mer-m8 38 CDS KLHL38 Medium_conserved miR-370 chr8:124665073 7-mer-A1 18 CDS KLHL38 Medium_conserved miR-376c/741-5p chr8:124664159 7-mer-m8 31 CDS

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score KLHL38 RAID00053255 hsa-miR-4688 miRNA MIMAT0019777 KLHL38 mRNA 340359 CLIP-seq//PAR-CLIP 0.6606 KLHL38 RAID00738430 hsa-miR-6761-5p miRNA MIMAT0027422 KLHL38 mRNA 340359 CLIP-seq//PAR-CLIP 0.6606 KLHL38 RAID01149403 hsa-miR-6857-3p miRNA MIMAT0027615 KLHL38 mRNA 340359 PAR-CLIP 0.5483 KLHL38 RAID01191623 hsa-miR-182-5p miRNA MIMAT0000259 KLHL38 mRNA 340359 Prediction 0.1828 KLHL38 RAID01469493 hsa-miR-6856-5p miRNA MIMAT0027612 KLHL38 mRNA 340359 CLIP-seq//PAR-CLIP 0.6606 KLHL38 RAID01629443 hsa-miR-5688 miRNA MIMAT0022479 KLHL38 mRNA 340359 Prediction 0.1828 KLHL38 RAID01700377 hsa-miR-599 miRNA MIMAT0003267 KLHL38 mRNA 340359 Prediction 0.1828 KLHL38 RAID01829732 hsa-miR-423-5p miRNA MIMAT0004748 KLHL38 mRNA 340359 CLIP-seq//PAR-CLIP 0.6606 KLHL38 RAID01911502 hsa-miR-6758-5p miRNA MIMAT0027416 KLHL38 mRNA 340359 CLIP-seq//PAR-CLIP 0.6606 KLHL38 RAID02100829 hsa-miR-96-5p miRNA MIMAT0000095 KLHL38 mRNA 340359 Prediction 0.1828 KLHL38 RAID02319337 hsa-miR-874-3p miRNA MIMAT0004911 KLHL38 mRNA 340359 Prediction 0.1828 KLHL38 RAID02516172 hsa-miR-873-3p miRNA MIMAT0022717 KLHL38 mRNA 340359 PAR-CLIP 0.5483 KLHL38 RAID02550758 hsa-miR-6884-5p miRNA MIMAT0027668 KLHL38 mRNA 340359 Prediction 0.1828 KLHL38 RAID03115171 hsa-miR-6743-5p miRNA MIMAT0027387 KLHL38 mRNA 340359 CLIP-seq//PAR-CLIP 0.6606 KLHL38 RAID03226897 hsa-miR-3184-5p miRNA MIMAT0015064 KLHL38 mRNA 340359 CLIP-seq//PAR-CLIP 0.6606 KLHL38 RAID03248785 hsa-miR-486-3p miRNA MIMAT0004762 KLHL38 mRNA 340359 CLIP-seq//PAR-CLIP 0.6606 KLHL38 RAID03612299 hsa-miR-4499 miRNA MIMAT0019035 KLHL38 mRNA 340359 PAR-CLIP 0.5483