DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome HIC1 3'UTR e124ef441c BA049153 NM_001098202 chr17:1908880-1909731:+ HIC1 3'UTR ca5d334e49 BA049154 NM_001098202 chr17:1908880-1909731:+ HIC1 5'UTR e124ef441c CA076213 NM_001098202 chr17:1905143-1906734:+ HIC1 5'UTR ca5d334e49 CA076214 NM_001098202 chr17:1906354-1906734:+

DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence HIC1; ZBTB29 ATTTA 1-2202 2424-2428;2876-2880 HIC1; ZBTB29 WTATTTATW 1-2202 2874-2882 HIC1; ZBTB29 WWATTTAWW 1-2202 2422-2430;2874-2882

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0041373 chr17 1958262 1962981 +

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-HIC1-antisense.1 NM_006497Tchr17:1960594-1961517 expressed HIC1 3090 protein-coding - not_available hsa-circ-HIC1-antisense.4 NM_001098202Tchr17:1961731-1961889 expressed HIC1 3090 protein-coding - not_available hsa-circ-HIC1-overlap.1 NM_001098202Tchr17:1958262-1962981 expressed HIC1 3090 protein-coding + hsa_circ_0041373 hsa-circ-HIC1-overlap.4 NM_001098202Tchr17:1961433-1961711 expressed HIC1 3090 protein-coding + not_available

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT017725 hsa-miR-335-5p Homo sapiens HIC1 3090 Homo sapiens Microarray Functional MTI (Weak) 18185580 MIRT286061 hsa-miR-3175 Homo sapiens HIC1 3090 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT286071 hsa-miR-6777-5p Homo sapiens HIC1 3090 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT286073 hsa-miR-6889-5p Homo sapiens HIC1 3090 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT487220 hsa-miR-4749-5p Homo sapiens HIC1 3090 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT487221 hsa-miR-4706 Homo sapiens HIC1 3090 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT487222 hsa-miR-18a-3p Homo sapiens HIC1 3090 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT487223 hsa-miR-324-3p Homo sapiens HIC1 3090 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT487224 hsa-miR-1913 Homo sapiens HIC1 3090 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT487226 hsa-miR-4781-5p Homo sapiens HIC1 3090 Homo sapiens PAR-CLIP Functional MTI (Weak) 23592263 MIRT727500 hsa-miR-19b-3p Homo sapiens HIC1 3090 Homo sapiens HITS-CLIP Functional MTI (Weak) 22473208 MIRT727501 hsa-miR-19a-3p Homo sapiens HIC1 3090 Homo sapiens HITS-CLIP Functional MTI (Weak) 22473208

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004481 hsa-let-7a* 3090 HIC1 cuuucugucAUCUAACAUAUc | | ||||||| cccuccucuUCGUUUGUAUAu 2 13 749 769 [hg19:17:1962878-1962898:+] 0.6861 144 7 -3.26 -0.9441 MIMAT0004482 hsa-let-7b* 3090 HIC1 cccuuccgucAUCCAACAUAUc | | ||||||| ucccuccucuUCGUUUGUAUAu 2 13 748 769 [hg19:17:1962877-1962898:+] 0.6861 144 7 -3.38 -0.9441 MIMAT0004486 hsa-let-7f-1* 3090 HIC1 cccuuccguuAUCUAACAUAUc | | ||||||| ucccuccucuUCGUUUGUAUAu 2 13 748 769 [hg19:17:1962877-1962898:+] 0.6861 144 7 -4.07 -0.9441 MIMAT0004587 hsa-miR-23b* 3090 HIC1 uuUAGUCG-UAC-GG--UCCU-UGGGu |||||| || || |||| |||| auAUCAGCUUUGACCAAAGGAGACCCc 2 21 235 261 [hg19:17:1962364-1962390:+] 0.5833 125 0 -21.99 -0.2470 MIMAT0004593 hsa-miR-130a* 3090 HIC1 cgucuGUCAUCG-UGUUACACUu |:| | : |:||||||| cacccCGGGACUGAUAAUGUGAa 2 18 493 515 [hg19:17:1962622-1962644:+] 0.6695 148 7 -15.21 -0.4594 MIMAT0004600 hsa-miR-144* 3090 HIC1 gaaugucAUAU-ACUACUAUAGg |||| | ||||||| ggaaauuUAUAUUUUUGAUAUCa 2 16 218 240 [hg19:17:1962347-1962369:+] 0.6132 150 7 -9.86 -1.1649 MIMAT0004610 hsa-miR-150* 3090 HIC1 gacAGGGGGUCCGGACAUG-GUc |::||:| |:||||| || auaUUUCCUA-CCUUGUACACAg 2 20 766 787 [hg19:17:1962895-1962916:+] 0.6861 121 0 -20.32 -0.6961 MIMAT0000457 hsa-miR-188-5p 3090 HIC1 gggaggUGGUACGUUCCCUac |: : |:|||||| ggugggAUGGGGUAAGGGAaa 3 16 202 222 [hg19:17:1962331-1962351:+] 0.6132 127 0 -12.09 -0.1982 MIMAT0000725 hsa-miR-373* 3090 HIC1 ccuuucgcggggguAAAACUca |||||| agggaaauuuauauUUUUGAua 3 9 216 237 [hg19:17:1962345-1962366:+] 0.6132 120 0 -6.12 -0.1009 MIMAT0004688 hsa-miR-374a* 3090 HIC1 uuaauguuauguuaGACUAUUc ||||||| cacccaccccgggaCUGAUAAu 2 9 489 510 [hg19:17:1962618-1962639:+] 0.6695 140 7 -11.59 -0.4183 MIMAT0004748 hsa-miR-423-5p 3090 HIC1 uuucagagcGAGAGA-CG-GGGAGu ||||:| || ||||| gaacgcgguCUCUUUAGCUCCCUCc 2 15 730 754 [hg19:17:1962859-1962883:+] 0.6469 121 0 -22.15 -0.6732 MIMAT0001635 hsa-miR-452 3090 HIC1 agucaaaggagacGUUUGUCaa ||||||| ucuauacucgaacCAAACAGca 3 10 812 833 [hg19:17:1962941-1962962:+] 0.6861 125 0 -12.24 -0.1078 MIMAT0002847 hsa-miR-518c* 3090 HIC1 gucUUUCACGAAGGGAGGUCUCu | || ||| |:||||||| uacACAG-GCU--CUUCCAGAGc 2 21 781 800 [hg19:17:1962910-1962929:+] 0.6861 151 7 -19.23 -0.4640 MIMAT0004777 hsa-miR-513a-3p 3090 HIC1 ggaagagUCUUUCCACUUUAAAu :| |||| ||||||| gggauggGGUAAGG-GAAAUUUa 2 17 205 226 [hg19:17:1962334-1962355:+] 0.6132 154 7 -13.20 -0.8164 MIMAT0004778 hsa-miR-508-5p 3090 HIC1 guaCUCACUGCGGGAGACCUCAu |:| |: | :|||||||| caaGGGCGGGGAGUUCUGGAGUc 2 21 575 597 [hg19:17:1962704-1962726:+] 0.5607 156 7 -23.11 -0.1216 MIMAT0003245 hsa-miR-580 3090 HIC1 ggauuacuaaguaGUAAGAGUu |||||||| uugcgaccacaccCAUUCUCAc 2 10 374 395 [hg19:17:1962503-1962524:+] 0.6382 145 7 -10.63 -0.1466 MIMAT0003276 hsa-miR-608 3090 HIC1 ugccucGACAGGGUUGUGGUGGGGa | | :|| || ||||||| gcacccCCGCUCCCAC-CCACCCCg 2 20 476 499 [hg19:17:1962605-1962628:+] 0.6080 153 7 -24.26 -0.1375 MIMAT0003278 hsa-miR-610 3090 HIC1 agGGUCGUGUGU-----AAAUCGAGu |::| ||:|: |||||||| ggCUGGAACGCGGUCUCUUUAGCUCc 2 20 725 750 [hg19:17:1962854-1962879:+] 0.6469 146 7 -18.17 -0.3248 MIMAT0004807 hsa-miR-624 3090 HIC1 ucCAU-UAUGGUUAUGGAACAc ||| || :| |||||||| uuGUAUAUUUC-CUACCUUGUa 2 20 762 782 [hg19:17:1962891-1962911:+] 0.6861 152 7 -11.87 -1.0746 MIMAT0003300 hsa-miR-631 3090 HIC1 cgacuccagacccGGUCCAGa ||||||| gaagagccuaccaCCAGGUCu 2 9 605 625 [hg19:17:1962734-1962754:+] 0.5607 140 7 -18.16 -0.1258 MIMAT0003324 hsa-miR-661 3090 HIC1 ugCGCGUCCGGU---CUCU-GGGUCCGu || : | ||| |||| ||||||| caGCUUUGACCAAAGGAGACCCCAGGCc 2 23 239 266 [hg19:17:1962368-1962395:+] 0.5833 156 7 -23.65 -0.1720 MIMAT0003336 hsa-miR-658 3090 HIC1 ugGUUGCCU---GGAUGAAGGGA-GGCGg ||| ||| || | |||| |||| acCAAAGGAGACCCCAGGCCCCUCCCGCc 2 24 247 275 [hg19:17:1962376-1962404:+] 0.5833 122 0 -29.89 -0.1800 MIMAT0003337 hsa-miR-659 3090 HIC1 accccuGGGAGGGACUUGGUUc |: | |: ||||||| cauuuuCUAUACUCGAACCAAa 2 17 807 828 [hg19:17:1962936-1962957:+] 0.6861 148 7 -15.13 -0.7726 MIMAT0004957 hsa-miR-760 3090 HIC1 agggGUGUCUG----GGUCUCGGc |||||:| |||||||| uguaCACAGGCUCUUCCAGAGCCg 2 17 779 802 [hg19:17:1962908-1962931:+] 0.6861 155 7 -31.16 -0.1443 MIMAT0004970 hsa-miR-920 3090 HIC1 auGACGAAGGUGUCGAGGGg | |: ||: :||||||| cgCGGUCUCUUUAGCUCCCu 2 19 733 752 [hg19:17:1962862-1962881:+] 0.6469 154 7 -19.18 -0.6891 MIMAT0005580 hsa-miR-1227 3090 HIC1 gaccCCUUUUCCCACCGUGc | | || ||||||| uuuuGCACAA--GUGGCACu 2 17 524 541 [hg19:17:1962653-1962670:+] 0.6494 141 7 -11.23 -0.6091 MIMAT0005881 hsa-miR-1291 3090 HIC1 ugacgaccagaagucaGUCCCGGu ||||||| caaguggcacuagcccCAGGGCCa 2 9 531 554 [hg19:17:1962660-1962683:+] 0.6494 140 7 -22.80 -0.3025 MIMAT0005887 hsa-miR-1299 3090 HIC1 agGGA-GUGUGUCU--UAAGGUCUu |:| :||||||: ||||||| acCUUGUACACAGGCUCUUCCAGAg 2 21 775 799 [hg19:17:1962904-1962928:+] 0.6861 158 7 -28.19 -0.3815 MIMAT0005905 hsa-miR-1254 3090 HIC1 ugacGUCCGAGGUCGAAGGUC-CGa |||||| ||||||| || uacaCAGGCU----CUUCCAGAGCc 2 21 781 801 [hg19:17:1962910-1962930:+] 0.6861 123 0 -24.13 -0.4779 MIMAT0005911 hsa-miR-1260 3090 HIC1 acCACCGUCUCCACCCUa | | |:|:||||||| ccGGGACGGGGGUGGGAu 2 17 192 209 [hg19:17:1962321-1962338:+] 0.5692 156 7 -26.23 -0.1389 MIMAT0005944 hsa-miR-1252 3090 HIC1 auuuacuuaaguuaAAGGAAGa ||||||| cccagggccaacccUUCCUUCc 2 9 545 566 [hg19:17:1962674-1962695:+] 0.6293 140 7 -12.76 -0.1039 MIMAT0014980 hsa-miR-3118 3090 HIC1 ucuuaaAAGUAUUACGUCAGUGu ||| | ||||||| caacccUUCCUUCCUCAGUCACc 2 18 553 575 [hg19:17:1962682-1962704:+] 0.5950 145 7 -10.71 -0.2022 MIMAT0015008 hsa-miR-3140 3090 HIC1 ugAUGGACUUAAGGGUUU-UCGa |||: ||| ||||| ||| uaUACUCGAA---CCAAACAGCa 2 21 814 833 [hg19:17:1962943-1962962:+] 0.6861 120 0 -11.24 -1.1156 MIMAT0015041 hsa-miR-1260b 3090 HIC1 uacCACCGUCACCACCCUa | | |:| ||||||| cccGGGACGGGGGUGGGAu 2 17 191 209 [hg19:17:1962320-1962338:+] 0.5692 152 7 -21.87 -0.1389 MIMAT0015048 hsa-miR-3173 3090 HIC1 acCGGACGGAUAAAGGA-GGAAa |::||: |||||||| |||| ucGUUUGUAUAUUUCCUACCUUg 2 21 758 780 [hg19:17:1962887-1962909:+] 0.6861 144 0 -19.83 -0.8855 MIMAT0015052 hsa-miR-3175 3090 HIC1 ugcAGUGACGCAAGAGAGGGGc ||||||:| ||||||| uucUCACUGUG-AAUCUCCCCg 2 20 389 409 [hg19:17:1962518-1962538:+] 0.6382 161 7 -32.43 -0.2389 MIMAT0015071 hsa-miR-3189 3090 HIC1 gauggggUAGUC-UGGGUUCCc | ||| | |||||| gcaauaaAGCAGUAACCAAGG- 2 15 831 851 [hg19:17:1962960-1962980:+] 0.6306 121 6 -15.42 -0.1218 MIMAT0015089 hsa-miR-3202 3090 HIC1 uaauuucGAGAAGAGGGAAGGu ||| :|||||||| cggugccCUCCCUUCCCUUCCc 2 16 636 657 [hg19:17:1962765-1962786:+] 0.5607 155 7 -20.14 -0.1824 MIMAT0015089 hsa-miR-3202 3090 HIC1 uaauuucgagaagaGGGAAGGu ||||||| agccccagggccaaCCCUUCCu 2 9 542 563 [hg19:17:1962671-1962692:+] 0.6293 140 7 -19.00 -0.4322 MIMAT0016853 hsa-miR-4300 3090 HIC1 cuucaucAGGUCGAGGGu |::||||||| cggucucUUUAGCUCCCu 2 12 735 752 [hg19:17:1962864-1962881:+] 0.6469 147 7 -16.56 -0.6965 MIMAT0016863 hsa-miR-4311 3090 HIC1 gugUGAGUCGAGAGAAAg || |:| ||||||| ggaACGCGG-UCUCUUUa 2 16 729 745 [hg19:17:1962858-1962874:+] 0.6077 149 7 -12.66 -0.1407 MIMAT0016916 hsa-miR-4286 3090 HIC1 ccauggUCCUCACCCCa :||||||||| gaguugGGGAGUGGGGa 2 12 431 447 [hg19:17:1962560-1962576:+] 0.6088 151 7 -21.81 -0.1087 MIMAT0016917 hsa-miR-4287 3090 HIC1 uuucacgggaGUUCCCUcu :|||||| ugggauggggUAAGGGAaa 3 10 204 222 [hg19:17:1962333-1962351:+] 0.6132 121 0 -10.19 -0.1945 MIMAT0016919 hsa-miR-4292 3090 HIC1 gguuccggCCGGGUCCCc | ||||||| uggcacuaGCCCCAGGGc 2 11 535 552 [hg19:17:1962664-1962681:+] 0.6494 142 7 -19.56 -0.1129 MIMAT0000073 hsa-miR-19a 3090 HIC1 agUCAAAACGUAUCUAAACGUGu |||| ||| ||||||| gaAGUUCCUCAU---UUUGCACa 2 22 513 532 [hg19:17:1962642-1962661:+] 0.6695 149 7 -13.15 -1.1166 MIMAT0000074 hsa-miR-19b 3090 HIC1 agUCAAAACGUACCUAAACGUGu |||| ||| ||||||| gaAGUUCCUCAU---UUUGCACa 2 22 513 532 [hg19:17:1962642-1962661:+] 0.6695 149 7 -13.15 -1.1166 MIMAT0000078 hsa-miR-23a 3090 HIC1 ccuuuaggGACCGUUACACUa ||| :||||||| ccccgggaCUGAUAAUGUGAa 2 14 495 515 [hg19:17:1962624-1962644:+] 0.6695 153 7 -15.01 -0.4661 MIMAT0000084 hsa-miR-27a 3090 HIC1 cgccuuGAAUCGGUGACACUu | | :|||||||| cacaccCAUUCUCACUGUGAa 2 16 381 401 [hg19:17:1962510-1962530:+] 0.6382 147 7 -15.02 -0.4957 MIMAT0000259 hsa-miR-182 3090 HIC1 ucACAC-UCAA-GAUGGUAACG-GUUu |||| |||| || : |||| ||| aaUGUGAAGUUCCUCAUUUUGCACAAg 2 23 508 534 [hg19:17:1962637-1962663:+] 0.6695 128 0 -19.07 -0.6218 MIMAT0000259 hsa-miR-182 3090 HIC1 ucACACUCAAGAUGGUAAC-GGUUu | ||| || | | ||| |||| uuUUUGAUAUC-AGCUUUGACCAAa 2 23 229 252 [hg19:17:1962358-1962381:+] 0.5833 120 0 -9.26 -0.7057 MIMAT0000418 hsa-miR-23b 3090 HIC1 ccauuaggGACCGUUACACUa ||| :||||||| ccccgggaCUGAUAAUGUGAa 2 14 495 515 [hg19:17:1962624-1962644:+] 0.6695 153 7 -14.58 -0.4661 MIMAT0000419 hsa-miR-27b 3090 HIC1 cgucuuGAAUCGGUGACACUu | | :|||||||| cacaccCAUUCUCACUGUGAa 2 16 381 401 [hg19:17:1962510-1962530:+] 0.6382 147 7 -15.34 -0.4957 MIMAT0000422 hsa-miR-124 3090 HIC1 ccguaAGUGGC---GCACGGAAu ||||:| |||||||| uggccUCACUGCUUCGUGCCUUa 2 16 147 169 [hg19:17:1962276-1962298:+] 0.5846 154 7 -26.44 -0.2461 MIMAT0000424 hsa-miR-128 3090 HIC1 uuucUCUGGCCA--AGUGACACu | ||| | |||||||| gaccACACCCAUUCUCACUGUGa 2 18 378 400 [hg19:17:1962507-1962529:+] 0.6382 148 7 -16.14 -0.8145 MIMAT0000429 hsa-miR-137 3090 HIC1 gaUGCGCAUAAGAAU-UCGUUAUu || || | | | ||||||| auACUCG-AACCAAACAGCAAUAa 2 22 815 837 [hg19:17:1962944-1962966:+] 0.6861 142 7 -12.05 -1.0935 MIMAT0000441 hsa-miR-9 3090 HIC1 agUAU-GUCGAUCUAUUGGUUUCu ||| ||||| |:||||||| ugAUAUCAGCU--UUGACCAAAGg 2 22 233 254 [hg19:17:1962362-1962383:+] 0.5833 161 7 -22.02 -0.1412 MIMAT0000447 hsa-miR-134 3090 HIC1 ggGGAGACCAGUUGGUCAGUGu || :| |: :||||||| aaCCCUUCCUUCCUCAGUCACc 2 21 554 575 [hg19:17:1962683-1962704:+] 0.5950 148 7 -22.68 -0.2079 MIMAT0000510 hsa-miR-320a 3090 HIC1 agcggGAGAGUUG-GGUCGAAAa :|:|::|: :||||||| uuauaUUUUUGAUAUCAGCUUUg 2 18 224 246 [hg19:17:1962353-1962375:+] 0.6125 152 7 -12.03 -0.9921 MIMAT0000752 hsa-miR-328 3090 HIC1 ugccUUC-CCGU-CUC----UCCCGGUc ||| |||| || ||||||| gcacAAGUGGCACUAGCCCCAGGGCCAa 2 19 528 555 [hg19:17:1962657-1962684:+] 0.6494 143 7 -20.15 -0.2108 MIMAT0002878 hsa-miR-506 3090 HIC1 agaugagucuuccCACGGAAu ||||||| gccucacugcuucGUGCCUUa 2 9 149 169 [hg19:17:1962278-1962298:+] 0.5846 140 7 -16.77 -0.2396 MIMAT0005792 hsa-miR-320b 3090 HIC1 aacggGAGAGUUG-GGUCGAAAa :|:|::|: :||||||| uuauaUUUUUGAUAUCAGCUUUg 2 18 224 246 [hg19:17:1962353-1962375:+] 0.6125 152 7 -12.03 -0.9921 MIMAT0005793 hsa-miR-320c 3090 HIC1 uggGAGAGUUG-GGUCGAAAa :|:|::|: :||||||| auaUUUUUGAUAUCAGCUUUg 2 18 226 246 [hg19:17:1962355-1962375:+] 0.6125 152 7 -12.11 -0.9921 MIMAT0004953 hsa-miR-873 3090 HIC1 ucCUCUGAGUGUUCAAGGAcg || | | |||||||| cuGAUAAUGUGAAGUUCCUca 3 20 503 523 [hg19:17:1962632-1962652:+] 0.6695 135 0 -11.58 -0.1249 MIMAT0006764 hsa-miR-320d 3090 HIC1 agGAGAGUUG-GGUCGAAAa :|:|::|: :||||||| uaUUUUUGAUAUCAGCUUUg 2 18 227 246 [hg19:17:1962356-1962375:+] 0.6125 152 7 -11.91 -0.9921

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G013834 HIC1 Homo sapiens 3090 7585125

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile HIC1 hsa-miR-23a beg:496 end:515 pic:3' CCTTTAGGGACCGTTACACTA 5'& ||.| ||| .||||||| &5' GGGA----CTGATAATGTGA- 3' HIC1 hsa-miR-23b beg:500 end:515 pic:3' CCATTAGGGACCGTTACACTA 5'& ||| .||||||| &5' --------CTGATAATGTGA- 3' HIC1 hsa-miR-27a beg:389 end:402 pic:3' CGCCTTGAATCGGTGACACTT 5'& .||||||||| &5' -----------TCACTGTGAA 3' HIC1 hsa-miR-27b beg:389 end:402 pic:3' CGTCTTGAATCGGTGACACTT 5'& .||||||||| &5' -----------TCACTGTGAA 3' HIC1 hsa-miR-4286 beg:430 end:447 pic:3' CCATGGTCCTCACCCCA 5'& || . .||||||||| &5' -GT-TGGGGAGTGGGG- 3' HIC1 hsa-miR-580 beg:384 end:395 pic:3' GGATTACTAAGTAGTAAGAGTT 5'& |||||||| &5' -------------CATTCTCA- 3' HIC1 hsa-miR-128 beg:381 end:401 pic:3' TTTCTCTGGCCA--AGTGACACT 5'& ||| ||||||||| &5' ------ACCCATTCTCACTGTGA 3' HIC1 hsa-miR-2861 beg:254 end:269 pic:3' GGCGGGTGGCGGTCCGGGG 5'& ||| ||||||||| &5' ------ACC-CCAGGCCCC 3' HIC1 hsa-miR-4318 beg:100 end:120 pic:3' TCGTA-CATG-GGTGTCAC 5'& ||| || | |||||||| &5' -GCAGCGT-CGCCACAGTG 3' HIC1 hsa-miR-608 beg:481 end:499 pic:3' TGCCTCGACAGGGTTGTGGTGGGGA 5'& || |||| || ||||||| &5' -----GC--TCCC-AC-CCACCCC- 3' HIC1 hsa-miR-661 beg:702 end:718 pic:3' TGCGCGTCCGGTCTCTGGGTCCGT 5'& || ||| ||||||| &5' ---------CCCGAG-CCCAGGC- 3' HIC1 hsa-miR-3202 beg:545 end:563 pic:3' TAATTTCGAGAAGAGGGAAGGT 5'& |..|| | ||||||| &5' ---AGGGC-CAA--CCCTTCC- 3' HIC1 hsa-miR-675 beg:464 end:481 pic:3' GTGACACCCGGGAGAGGCGTGGT 5'& |||||| | ||||||| &5' ------GGGCCC-C-CCGCACC- 3' HIC1 hsv2-miR-H10 beg:469 end:490 pic:3' GGCGG-GTGGGGGCGTGGG 5'& || || ||||||||| ||| &5' CC-CCGCACCCCCGCTCCC 3' HIC1 hsa-miR-1321 beg:631 end:649 pic:3' TAGTGTAA-GTGGAGGGAC 5'& |.|. | ||||||| &5' --CGCGGTGC-CCTCCCT- 3' HIC1 hsa-miR-1470 beg:454 end:471 pic:3' GCCCCACGTGCCCGCCTCCCG 5'& || ||| |||||||| &5' ------GC-CGGCCGGAGGGC 3' HIC1 hsa-let-7f beg:352 end:368 pic:3' TTGATATGTTAGAT---GATGGAGT 5'& ||| ||||||| &5' -----------CTAGCCCTACCTC- 3' HIC1 hsa-let-7g beg:358 end:368 pic:3' TTGACATGTTTGATGATGGAGT 5'& ||||||| &5' --------------CTACCTC- 3' HIC1 kshv-miR-K12-12star beg:290 end:306 pic:3' AGTTGGTCCCGTGGGAGGGGGT 5'& ||| ||||||||| &5' --------GGCCCCCTCCCCC- 3' HIC1 hsa-miR-24 beg:447 end:460 pic:3' GACAAGGACGACTTGACTCGGT 5'& |.|||||||| &5' -----------GGACTGAGCC- 3' HIC1 hsv1-miR-H1 beg:797 end:817 pic:3' AGGTGAAGGGCAGGAAGGTAG 5'& ||.||||| ..|||.|| &5' -CCGCTTCCA--TTTTCTAT- 3' HIC1 ebv-miR-BART14star beg:196 end:216 pic:3' ACATTTAGCCGTCGC---ATCCCAT 5'& ||| .|.| |.||||| &5' -------CGGGGGTGGGATGGGGTA 3' HIC1 ebv-miR-BART17-5p beg:743 end:759 pic:3' GAACATACGGACGCAGGAGAAT 5'& ||. | ||||||| &5' -------GCTCCC-TCCTCTT- 3' HIC1 ebv-miR-BART19-5p beg:430 end:444 pic:3' GTACAGTACAAAC-GCCCCTTACA 5'& | .|||||.|| &5' ------------GTTGGGGAGTG- 3' HIC1 hsa-miR-342-5p beg:473 end:483 pic:3' AGTTAGTGTCTATCGTGGGGA 5'& ||||||| &5' -------------GCACCCC- 3' HIC1 hsa-miR-3184 beg:259 end:271 pic:3' TTTTCGAGCCAGACTCCGGGGAGT 5'& ||||||||| &5' --------------AGGCCCCTC- 3' HIC1 hsa-miR-423-5p beg:261 end:271 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||||||| &5' ---------------GCCCCTC- 3' HIC1 sv40-miR-S1-5p beg:0 end:11 pic:3' TTCCGAGTAAAGTC-CGGGGAGT 5'& || ||||||| &5' ------------AGCGCCCCTC- 3' HIC1 kshv-miR-K12-6-5p beg:24 end:33 pic:3' GGCTACCTAATCCACGACGACC 5'& ||||||| &5' --------------GCTGCTG- 3' HIC1 hsa-miR-4297 beg:589 end:605 pic:3' GTGTCTGTCCTTCCGT 5'& . || | ||||||| &5' -GGAGTC-GGAAGGC- 3' HIC1 hsa-miR-1247 beg:188 end:213 pic:3' AGGCCCCTGCTT--GCCCTGCCCA 5'& || ||||||.. .||||.||| &5' -CCCGGGACGGGGGTGGGATGGG- 3' HIC1 hsa-miR-4290 beg:461 end:471 pic:3' CTCCCTTCTTTCCTCCCGT 5'& ||||||| &5' -----------GGAGGGC- 3' HIC1 hsv2-miR-H9-3p beg:191 end:209 pic:3' CTCCTCCTCTGGCTCCACCCTT 5'& |.||| |.||||||| &5' ------GGGACGGGGGTGGGA- 3' HIC1 hsa-miR-1260 beg:192 end:210 pic:3' ACCACC-GTCTCCACCCTA 5'& || |.|.|||||||| &5' ----GGACGGGGGTGGGAT 3' HIC1 hsa-miR-506 beg:152 end:170 pic:3' AGATGAGTCTTCCCACGGAAT 5'& ||.||. |||||||| &5' -CTGCTTC-----GTGCCTTA 3' HIC1 hsa-miR-1227 beg:531 end:541 pic:3' GACCCCTTTTCCCACCGTGC 5'& ||||||| &5' ------------GTGGCAC- 3' HIC1 hcmv-miR-UL112 beg:11 end:30 pic:3' TCGGACCTAGAGTGGCAGTGAA 5'& |||| | |.|||.|| &5' AGCCCG-----CTCTGTCGCT- 3' HIC1 hcmv-miR-UL70-3p beg:687 end:708 pic:3' GGCGCGCGGTCGGGTAGGGG 5'& ||| ||| | |||||||| &5' CCG-GCGGCCCCCCATCCC- 3' HIC1 hcmv-miR-US33-5p beg:78 end:103 pic:3' GCGGGTGCCA--GGCCCGTGTTAG 5'& |||||| || ||||| |||| | &5' -GCCCACTGTGCCCGGG-ACAACC 3' HIC1 hiv1-miR-H1 beg:707 end:731 pic:3' CGGGTCCG-TGCGGAGGGACC 5'& |||||||| . ||. |||| &5' GCCCAGGCTGGGCTGGGCTGG 3' HIC1 hiv1-miR-H1 beg:638 end:660 pic:3' CGGGTCCGT-GCGGAGGGACC 5'& |||| | |.|||||| &5' GCCCTCCCTTCCCTTCCCTG- 3' HIC1 hsa-let-7b beg:346 end:368 pic:3' TTGGTGTGTTGGAT---GATGGAGT 5'& .||| |||| ||||||| &5' ----GCACT-CCTAGCCCTACCTC- 3' HIC1 hsa-let-7d beg:346 end:368 pic:3' TTGATACGTT-GGAT---GATGGAGA 5'& ||| |||| ||||||| &5' ------GCACTCCTAGCCCTACCTC- 3' HIC1 hsa-let-7e beg:348 end:368 pic:3' TTGATATGTT-GGA---GGATGGAGT 5'& .|| ||| |||||||| &5' ------GCACTCCTAGCCCTACCTC- 3' HIC1 hsa-let-7i beg:347 end:368 pic:3' TTGTCGTGTTTGAT---GATGGAGT 5'& .|||| ||| ||||||| &5' ---GGCACTC-CTAGCCCTACCTC- 3' HIC1 hsa-miR-106bstar beg:71 end:92 pic:3' CGT-CGTTCATGGGTGTCACGCC 5'& ||. |||.| .||||| |||| &5' GCGCGCAGG-GCCCACTGTGC-- 3' HIC1 hsa-miR-1181 beg:55 end:74 pic:3' GCCGAGCCCACCGCCGCTGCC 5'& || ||| || ||||.|| &5' -GGAGCGGCGGG-GGCGGCG- 3' HIC1 hsa-miR-1200 beg:167 end:179 pic:3' CTCCGAGTCTTACCGAGTCCTC 5'& ||||.||.| &5' -------------GCTCGGGGG 3' HIC1 hsa-miR-1224-5p beg:123 end:146 pic:3' GGTGGAGGGCTCA-GGAGTG 5'& |||||||.||. |||||| &5' CCACCTCTCGGCGGCCTCAC 3' HIC1 hsa-miR-1224-5p beg:262 end:281 pic:3' GGTGGAGGGCTCAGGAGTG 5'& || ||||||| ||.|| &5' CC-CCTCCCGCCTCTTC-- 3' HIC1 hsa-miR-1225-3p beg:407 end:430 pic:3' GACCCCCGCCGTGTC-CCCGAGT 5'& |||||| ||| .|. |||| &5' CTGGGGTCGGAGCGTCGGGC--- 3' HIC1 hsa-miR-1225-5p beg:70 end:94 pic:3' GGGGGGTGACCCGG----CATGGGTG 5'& | |.| ||||| ||.|||. &5' ---CGCGCAGGGCCCACTGTGCCCG- 3' HIC1 hsa-miR-1226star beg:292 end:324 pic:3' GGGGTAGGT--CCGGA-CGT-ACGGGAGTG 5'& |||| ||| |||. ||. |||.||.| &5' CCCCCTCCCCCGGCTCCGCGCTGCTCTTA- 3' HIC1 hsa-miR-1228star beg:472 end:496 pic:3' GTGTGTGGACGGGGGCGGGTG 5'& |.||| || ||.||| ||||| &5' CGCACCCCCGCTCCCACCCAC 3' HIC1 hsa-miR-1236 beg:432 end:452 pic:3' GACCTCTCTGTTCCCCTTCTCC 5'& |||.||| |||||.|.| &5' -TGGGGAGT---GGGGAGGGG- 3' HIC1 hsa-miR-1236 beg:312 end:335 pic:3' GACCTCTCTGTTCCCCTTCTCC 5'& ||| .|||||.||.|| &5' CTGCTCTTA-GAGGGGGAGGGG 3' HIC1 hsa-miR-1237 beg:589 end:604 pic:3' GACCCCCTGCCTC-GTCTTCCT 5'& |||| |.||||| &5' ---------GGAGTCGGAAGG- 3' HIC1 hsa-miR-124 beg:149 end:170 pic:3' CCGTAAGTGGCG---CACGGAAT 5'& ||||.|| |||||||| &5' -----TCACTGCTTCGTGCCTTA 3' HIC1 hsa-miR-1244 beg:803 end:833 pic:3' TTGGTAGAG--TATG--TTTGGTTGA-TGAA 5'& ||||.|. |||| .|||||| .| &5' --CCATTTTCTATACTCGAACCAAACAGC-- 3' HIC1 hsa-miR-1249 beg:320 end:339 pic:3' ACTTCTTCCCCCCCTTCCCGCA 5'& || ||||||.|||.|| &5' ------AGAGGGGGAGGGGTGT 3' HIC1 hsa-miR-125a-3p beg:127 end:149 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& |||.|.. .||||||||| &5' --CTCTCGGCGGCCTCACCTG- 3' HIC1 hsa-miR-125b-1star beg:539 end:559 pic:3' TCGAGGGTTCTCGGATTGGGCA 5'& ||| ||||.| ||| ||||| &5' AGC-CCCAGG-GCC-AACCC-- 3' HIC1 hsa-miR-1262 beg:476 end:495 pic:3' TAGGAAGATGTTTAAGTGGGTA 5'& || | | |||||| &5' --CCC-CCGCTCC--CACCCA- 3' HIC1 hsa-miR-1268 beg:685 end:703 pic:3' GGGGGTGGTGGTGCGGGC 5'& |||| .| .|| | ||| &5' CCCCGGCGGCC-C-CCC- 3' HIC1 hsa-miR-1270 beg:792 end:816 pic:3' TGTGTCGA-GAAGGTATAGAGGTC 5'& || ||| ||||||| |.||.| &5' -CAGAGCCGCTTCCAT-TTTCTA- 3' HIC1 hsa-miR-1274a beg:567 end:587 pic:3' ACCGCGGA-CTTGTCCCTG 5'& | | || |..|.|||| &5' -GTCACCAAGGGCGGGGA- 3' HIC1 hsa-miR-1275 beg:287 end:306 pic:3' CTGTCGGA-GAGGGGGTG 5'& | |.||| |||||||. &5' GTCGGCCCCCTCCCCCG- 3' HIC1 hsa-miR-1281 beg:433 end:453 pic:3' CCCTCTC-CTCCTCCGCT 5'& ||.||| |.||||| || &5' -GGGGAGTGGGGAGGGGA 3' HIC1 hsa-miR-1281 beg:53 end:71 pic:3' CCCTCTCCTCCTCCGCT 5'& ||||| || ||.|||| &5' GGGAGCGGCGGGGGCG- 3' HIC1 hsa-miR-1294 beg:143 end:156 pic:3' TCTGTTGTTACGGTTGGAGTGT 5'& | .|||||| &5' -----------CTGGCCTCAC- 3' HIC1 hsa-miR-1296 beg:24 end:44 pic:3' CCTCTACCTCGGT-C-CCGGGATT 5'& | ||.. | ||||||. &5' ------GCTGCTGCGCGGCCCTG- 3' HIC1 hsa-miR-1306 beg:540 end:557 pic:3' GTGGTGGTCTCGGTTGCA 5'& .|| ||||.|||||| &5' -GCC-CCAGGGCCAAC-- 3' HIC1 hsa-miR-1321 beg:544 end:564 pic:3' TAGTGTAAGT--GGAGGGAC 5'& || . || |||.||| &5' --CAGGGCCAACCCTTCCT- 3' HIC1 hsa-miR-1321 beg:641 end:660 pic:3' TAGTGTAAGTGGAGGGAC 5'& || | ||| |.|||||| &5' -TC-CCTTCCCTTCCCTG 3' HIC1 hsa-miR-134 beg:553 end:575 pic:3' GGGGAGACCAGTTGGTCAGTGT 5'& |||.|| || .||||||| &5' CCCTTCCT-TCC-TCAGTCAC- 3' HIC1 hsa-miR-140-3p beg:268 end:288 pic:3' GGCACCAAGATGGGACACCAT 5'& ||| ||| .|||||||| &5' CCGCC--TCT-TCCTGTGGT- 3' HIC1 hsa-miR-149 beg:434 end:462 pic:3' CCCTCACTTCTGTGC---CTCGGTCT 5'& |||||||..|| . | |||||.| &5' GGGAGTGGGGAGGGGACTGAGCCGG- 3' HIC1 hsa-miR-15bstar beg:270 end:290 pic:3' ATCTCGTCGTTTATTACTAAGC 5'& || | .||.|||| &5' ----GCCTCTTCCTGTGGTTCG 3' HIC1 hsa-miR-1825 beg:435 end:456 pic:3' CCTC--TCCTCCCGTGACCT 5'& |||| .|||||| |||| &5' GGAGTGGGGAGGGGACTG-- 3' HIC1 hsa-miR-1908 beg:257 end:276 pic:3' CTGGTTAGCGGCAGGGGCGGC 5'& |||. ||| .|||||| &5' --CCAG--GCCCCTCCCGCC- 3' HIC1 hsa-miR-1908 beg:465 end:487 pic:3' CTGGTTAGCGGCAGGGGCGGC 5'& |.|| ||| ||||||. &5' GGCCCCCCGCAC-CCCCGCT- 3' HIC1 hsa-miR-1909 beg:363 end:379 pic:3' GCCACTCGTGGGCCGGGGACGC 5'& .|||||||.|||| &5' ---------TCCGGCCCTTGCG 3' HIC1 hsa-miR-1913 beg:53 end:74 pic:3' ACCGTCGTCGCCTCCCCCGTCT 5'& || |||.||||.|| ||| &5' -GGGAGCGGCGGGGGCGGC--- 3' HIC1 hsa-miR-1914 beg:63 end:82 pic:3' GTCTTCACCCGGCC-CGTGTCCC 5'& ||| ||| ||.||||| &5' -------GGGGCGGCGCGCAGGG 3' HIC1 hsa-miR-1914star beg:256 end:272 pic:3' GGAGGGTCACGCCCTGGGGAGG 5'& ||||| .||||||| &5' ---CCCAG------GCCCCTCC 3' HIC1 hsa-miR-1914star beg:543 end:563 pic:3' GGAGGGTCACGCCCTGGGGAGG 5'& ||||| || ||||.||| &5' ---CCCAGGGCCA-ACCCTTCC 3' HIC1 hsa-miR-1915star beg:198 end:219 pic:3' CCGGGCCCGTCGT--TCCGTTCCA 5'& ||| | | .||.|||| &5' -----GGGTGGGATGGGGTAAGG- 3' HIC1 hsa-miR-193a-5p beg:69 end:86 pic:3' AGTAGAGCGGGCGTTTCTGGGT 5'& || ||| |.|.|||| &5' -------GCGCGC-AGGGCCCA 3' HIC1 hsa-miR-193bstar beg:175 end:195 pic:3' AGTAGAGCGGGAG--TTTTGGGGC 5'& |.| |.||||||| &5' -------GTCGGGGGAGAACCCCG 3' HIC1 hsa-miR-194star beg:145 end:158 pic:3' GTCTATTGTCGTCGGGGTGACC 5'& .|||.||||| &5' -----------GGCCTCACTG- 3' HIC1 hsa-miR-194star beg:64 end:89 pic:3' GTCTATTGT-CGT-CGGGGTGACC 5'& .|. .|. ||| | ||||||| &5' -GGGCGGCGCGCAGGGCCCACTG- 3' HIC1 hsa-miR-197 beg:430 end:458 pic:3' CGACCC---ACCTCTTCCACCACTT 5'& |.|||| |||.||.|| |||. &5' GTTGGGGAGTGGGGAGGGGACTGAG 3' HIC1 hsa-miR-1979 beg:428 end:447 pic:3' ATCAGTTCACTTCGTCACCCTC 5'& .||| .| ||||||. &5' -----GAGTTGGGGAGTGGGG- 3' HIC1 hsa-miR-19a beg:758 end:785 pic:3' AGTCAAAACGTATCTA------AACGTGT 5'& ||||.||| | |||.||| &5' -----TTTGTATATTTCCTACCTTGTACA 3' HIC1 hsa-miR-19a beg:512 end:533 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& |||| ||| |||||||| &5' --AGTTCCTCAT---TTTGCACA 3' HIC1 hsa-miR-202 beg:801 end:821 pic:3' AAGGGTACGGGATATGGAGA 5'& |.|||| ..||||| ||| &5' -TTCCATTTTCTATA-CTC- 3' HIC1 hsa-miR-202 beg:350 end:368 pic:3' AAGGGTACGGGATATGGAGA 5'& |||.| ||||| ||||| &5' -TCCTA-GCCCT--ACCTC- 3' HIC1 hsa-miR-204 beg:201 end:222 pic:3' TCCGTATCCTACTGT-TTCCCTT 5'& ||. .|||||. . ||||||| &5' -GGT--GGGATGGGGTAAGGGAA 3' HIC1 hsa-miR-211 beg:196 end:222 pic:3' TCCGCTTCCTACTGT-TTCCCTT 5'& .|| | .|||||. . ||||||| &5' GGGGGTGGGATGGGGTAAGGGAA 3' HIC1 hsa-miR-219-1-3p beg:158 end:174 pic:3' GCCCTGCAGGTCTGAGTTGAGA 5'& ||| | ||.|.||| &5' -----CGTGC---CTTAGCTC- 3' HIC1 hsa-miR-220c beg:269 end:286 pic:3' TCAGAAGTGTTGTCGGGACACA 5'& |.| | .|||||| &5' ------CGCCTCT-TCCTGTG- 3' HIC1 hsa-miR-2278 beg:301 end:323 pic:3' GGTCCGTTGTGTGTGACGAGAG 5'& || ||| | |.|.|||||||. &5' CCCGGCT-C-CGCGCTGCTCTT 3' HIC1 hsa-miR-2355 beg:420 end:441 pic:3' AACAGGTAACATAGACCCCTA 5'& ||| . .|||||| &5' --GTCGGGCAGAGTTGGGGA- 3' HIC1 hsa-miR-28-5p beg:497 end:522 pic:3' GAGTTATCTG------ACAC-TCGAGGAA 5'& .||| |||| ||.|||| &5' ------GGACTGATAATGTGAAGTTCCT- 3' HIC1 hsa-miR-2861 beg:485 end:505 pic:3' GGCGGGTGGCGGTCC-GGGG 5'& || |||||| ||.|| |. &5' CCACCCACC-CCGGGACT-- 3' HIC1 hsa-miR-2861 beg:479 end:499 pic:3' GGCGGGTGGCGGTCCGGGG 5'& ||||.| || || |||| &5' CCGCTC-CCACCCA-CCCC 3' HIC1 hsa-miR-2909 beg:34 end:46 pic:3' GGTTCTCTACAACCGGGATTG 5'& ||||||..| &5' ------------GGCCCTGGC 3' HIC1 hsa-miR-30c-1star beg:473 end:491 pic:3' CCTCATTTGTTGGGA-GAGGGTC 5'& .|| ||| |||||| &5' -------GCACCCCCGCTCCCA- 3' HIC1 hsa-miR-3131 beg:0 end:20 pic:3' TTC-CGGGAAGGTGGTCAGGAGCT 5'& || |||| .|.|||| || || &5' -AGCGCCCC-TCGCCAG-CC-CG- 3' HIC1 hsa-miR-3136 beg:552 end:574 pic:3' TTACTGGGATGGATA-AGTCAGTC 5'& ||||| ||| ||||||| &5' ----ACCCTTCCTTCCTCAGTCA- 3' HIC1 hsa-miR-3141 beg:639 end:659 pic:3' AGGA-GGAGGTGGGCGGGAG 5'& ||| |||.| ||. |||| &5' -CCTCCCTTC-CCTTCCCT- 3' HIC1 hsa-miR-3162 beg:262 end:284 pic:3' GAGGGGTGGGAAGATGAGGGATT 5'& |||| ||| || ||.|||. &5' --CCCCTCCCGCCT-CTTCCTG- 3' HIC1 hsa-miR-3162 beg:638 end:660 pic:3' GAGGGGTGGGAAGATGAGGGATT 5'& ||| |||||| .|||||. &5' ---CCCTCCCTTCCCTTCCCTG- 3' HIC1 hsa-miR-3162 beg:744 end:776 pic:3' GAGGGGTGGGAAG-------ATGAGGGATT 5'& ||||| |.|||| ||.|.|||| &5' CTCCCTCCTCTTCGTTTGTATATTTCCTA- 3' HIC1 hsa-miR-3172 beg:248 end:263 pic:3' ATTCCTGACGTTTTGGGGT 5'& ||||| .|||||| &5' -AAGGA------GACCCCA 3' HIC1 hsa-miR-3179 beg:269 end:281 pic:3' TGCAAATTTAAAGTGGGGAAGA 5'& |.||.|||| &5' ------------CGCCTCTTC- 3' HIC1 hsa-miR-3180-5p beg:575 end:596 pic:3' GCTGCACCCCGCCTCGC-AGACCTTC 5'& ||||||.| | ||||||. &5' -------GGGCGGGGAGTTCTGGAG- 3' HIC1 hsa-miR-3181 beg:455 end:473 pic:3' GGCCGCGGCTCCCGGGCTA 5'& ||||| | |||||||| &5' CCGGC-CGGAGGGCCC--- 3' HIC1 hsa-miR-3183 beg:436 end:452 pic:3' AGGCTCGCTGAGGCTCTCTCCG 5'& |||.| |.|||.|| &5' ---GAGTG-----GGGAGGGG- 3' HIC1 hsa-miR-3189 beg:38 end:59 pic:3' GATGGGGTAGTCTGGGTTCCC 5'& ||. |||. || ||||.|| &5' CTGGCCCG-CAC-CCCAGGG- 3' HIC1 hsa-miR-3196 beg:259 end:278 pic:3' CTCCGGGGACGGCGGGGC 5'& |||||||| |||||.| &5' -AGGCCCCTCCCGCCTC- 3' HIC1 hsa-miR-3196 beg:466 end:485 pic:3' CTCCGGGGA-CGGCGGGGC 5'& .|||||| || ||||| &5' -GGGCCCCCCGCACCCCCG 3' HIC1 hsa-miR-3196 beg:0 end:19 pic:3' CTC-CGGGGA-CGG-CGGGGC 5'& || |||||| ||| |||| &5' -AGCGCCCCTCGCCAGCCC-- 3' HIC1 hsa-miR-3202 beg:632 end:652 pic:3' TAATTTCGAGAA--GAGGGAAGGT 5'& || ||||||||| &5' ------GCGGTGCCCTCCCTTCC- 3' HIC1 hsa-miR-324-3p beg:50 end:73 pic:3' GGT-CGTCGTGGACCCCGTCA 5'& ||| | |||. | |||||.| &5' CCAGGGAGCGGCGGGGGCGG- 3' HIC1 hsa-miR-328 beg:53 end:74 pic:3' TGCCTTC-CCGTCTCTCCCGGTC 5'& ||.|| |||.|.|. ||| &5' --GGGAGCGGCGGGGGCGGC--- 3' HIC1 hsa-miR-330-5p beg:38 end:60 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& |||.. |.|| |||||.|| &5' -CCTGGCCCGCAC-CCCAGGGA 3' HIC1 hsa-miR-330-5p beg:533 end:552 pic:3' CGGATTCTGTG-TCCGGGTCTCT 5'& |.||| || |||||.| &5' ------GGCACTAGCCCCAGGG- 3' HIC1 hsa-miR-33bstar beg:333 end:354 pic:3' CCCGACGTGACGGCTCCGTGAC 5'& ||. |||||.||.|||||| &5' -GGTGTCACTGTCGGGGCACT- 3' HIC1 hsa-miR-34a beg:10 end:33 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||.|| ||| | |.||||. &5' -CAGCCCGCTCTGTCGCTGCT- 3' HIC1 hsa-miR-361-5p beg:491 end:510 pic:3' CATGGGGACCTCTAAGACTATT 5'& ||||| ||| ||||||| &5' --ACCCCGGGA----CTGATAA 3' HIC1 hsa-miR-363star beg:114 end:132 pic:3' TTTAACGTAGCACTAGGTGGGC 5'& |. || | ||||||. &5' -----GTGGCG-GCTCCACCT- 3' HIC1 hsa-miR-377star beg:124 end:144 pic:3' CTTAAGTGGTTC-CCGTTGGAGA 5'& |||| |||..|||| &5' -----CACCTCTCGGCGGCCTC- 3' HIC1 hsa-miR-4253 beg:626 end:645 pic:3' TGGGGGA-CCTGTACGGGA 5'& ||.||| || |||||| &5' ACTCCCGCGG---TGCCCT 3' HIC1 hsa-miR-4255 beg:802 end:820 pic:3' AGGTAGAGACTTGTGAC 5'& |||||.|. |.||| &5' TCCATTTTCT-ATACT- 3' HIC1 hsa-miR-4257 beg:349 end:371 pic:3' GAG--TCAGGGGTGGAGACC 5'& ||| || |||.||||| || &5' CTCCTAG-CCCTACCTCCGG 3' HIC1 hsa-miR-4259 beg:363 end:385 pic:3' AGGACTGGGGAT-CTGG-GTTGAC 5'& ||| |.|||.|. |||| || &5' TCC-GGCCCTTGCGACCACA---- 3' HIC1 hsa-miR-425star beg:689 end:710 pic:3' CCCGCCTGTGCTGTAAGGGCTA 5'& ||||| | | || |||||| &5' -GGCGGCC-CCCCA-TCCCGA- 3' HIC1 hsa-miR-4260 beg:531 end:551 pic:3' ACCCTGAGGTACGGGGTTC 5'& | |.| |.| ||||||.| &5' -GTGGCACTA-GCCCCAGG 3' HIC1 hsa-miR-4263 beg:311 end:327 pic:3' CCGGTTCCGTGAATCTTA 5'& ||. || ||||||. &5' -GCT---GCTCTTAGAG- 3' HIC1 hsa-miR-4270 beg:261 end:284 pic:3' CGGGAGGGGACT-GAGGGACT 5'& |||| ||| ||.|||| &5' GCCCCTCCCGCCTCTTCCTG- 3' HIC1 hsa-miR-4270 beg:294 end:312 pic:3' CGGGAGGGGACTGAGGGACT 5'& |||||||| |.|||| &5' -CCCTCCCCCGGCTCC---- 3' HIC1 hsa-miR-4270 beg:637 end:660 pic:3' CGGGAGGGGACTG-AGGGACT 5'& ||||||||.| | |||||| &5' GCCCTCCCTTCCCTTCCCTG- 3' HIC1 hsa-miR-4271 beg:549 end:564 pic:3' GGGGTGGAAAAGAAGGGGG 5'& || ||| |||||..| &5' -CCAACC----CTTCCTTC 3' HIC1 hsa-miR-4271 beg:638 end:659 pic:3' GGGGTGGAAAAGAAGGGGG 5'& ||| |||| ||||||. &5' CCCTCCCTTCCCTTCCCT- 3' HIC1 hsa-miR-4274 beg:437 end:456 pic:3' GTC-CCCCT-CCCTGACGAC 5'& || ||||| ||||||| &5' -AGTGGGGAGGGGACTG--- 3' HIC1 hsa-miR-4281 beg:292 end:312 pic:3' GGGGGGAGGGGCCCTGGG 5'& |||||||||| || || &5' -CCCCCTCCCCCGGCTCC 3' HIC1 hsa-miR-4283 beg:529 end:549 pic:3' TTTGAGCGAC-TCGGGGT 5'& || | || ||||||| &5' -AAGTGGCACTAGCCCCA 3' HIC1 hsa-miR-4287 beg:167 end:189 pic:3' TTTCACGGG-----AGTTCCCTCT 5'& ||.| ||..|||||| &5' -----GCTCGGGGGTCGGGGGAGA 3' HIC1 hsa-miR-4287 beg:313 end:332 pic:3' TTTCACGGGAGT-TCCCTCT 5'& |||.||.| ||||.|| &5' ----TGCTCTTAGAGGGGGA 3' HIC1 hsa-miR-4294 beg:751 end:774 pic:3' GGGA--C-GACATCTGAGGG 5'& |.|| | .|||| |.|.|| &5' CTCTTCGTTTGTATATTTCC 3' HIC1 hsa-miR-4298 beg:636 end:658 pic:3' GAC-GGAGGAGGAGGACAGGGTC 5'& || ||||| |.||| |||| &5' -TGCCCTCC-CTTCCCTTCCC-- 3' HIC1 hsa-miR-4299 beg:558 end:577 pic:3' CGGA--GAGTACAGTGGTCG 5'& ||| |||| ||||||| &5' -CCTTCCTCA-GTCACCA-- 3' HIC1 hsa-miR-4300 beg:478 end:491 pic:3' CTTCATCAGGTCGAGGGT 5'& || ||||||| &5' --------CCCGCTCCCA 3' HIC1 hsa-miR-4300 beg:731 end:752 pic:3' CTTCATCAGG----TCGAGGGT 5'& | |||. ||||||| &5' ---GCGGTCTCTTTAGCTCCC- 3' HIC1 hsa-miR-4300 beg:795 end:809 pic:3' CTTCATCAGGTCGAGGGT 5'& || || |||.||| &5' -----AG-CC-GCTTCCA 3' HIC1 hsa-miR-4301 beg:426 end:447 pic:3' AGTGT-TC-ACTTCATCACCCT 5'& .|| || ||..| ||||||. &5' --GCAGAGTTGGGG-AGTGGGG 3' HIC1 hsa-miR-4305 beg:428 end:450 pic:3' CTTGACCTC-CACAGATCC 5'& || |||.| ||| ||| &5' GAGTTGGGGAGTGGGGAGG 3' HIC1 hsa-miR-4308 beg:47 end:60 pic:3' TTCTTCTTTGAGGTCCCT 5'& || ||||||| &5' --------ACCCCAGGGA 3' HIC1 hsa-miR-4316 beg:136 end:157 pic:3' GTGGTC--GATCGGAGTGG 5'& .|| ||.|||||||. &5' -GCCTCACCTGGCCTCACT 3' HIC1 hsa-miR-4316 beg:124 end:147 pic:3' GTGG----TCGATCGGAGTGG 5'& |||| .|| .|||||||| &5' CACCTCTCGGC-GGCCTCACC 3' HIC1 hsa-miR-431star beg:126 end:143 pic:3' TCTTCGGGACGTTCTGCTGGAC 5'& ||| | |.||.||| &5' ------CCT-CTCGGCGGCCT- 3' HIC1 hsa-miR-4325 beg:518 end:540 pic:3' AGTGACTC-TGTTCA-CGTT 5'& |||.| | |||||| ||| &5' TCATTTTGCACAAGTGGCA- 3' HIC1 hsa-miR-449b beg:143 end:161 pic:3' CGGTCGATTGTTATGTGACGGA 5'& ||..| ||||||.| &5' -----CTGGCCT--CACTGCTT 3' HIC1 hsa-miR-483-3p beg:422 end:445 pic:3' TTCTGCCC-TC-CT-CTCCTCACT 5'& | |||| || | |.||||||. &5' --GTCGGGCAGAGTTGGGGAGTGG 3' HIC1 hsa-miR-484 beg:438 end:460 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& .| |||||||||||||||| &5' GTGGGGAGGGGACTGAGCC--- 3' HIC1 hsa-miR-493star beg:769 end:785 pic:3' TTACTTTCGGATGGTACATGTT 5'& |||||| |||||| &5' --------CCTACCTTGTACA- 3' HIC1 hsa-miR-502-5p beg:45 end:60 pic:3' ATCGTGGGTCTATCGTTCCTA 5'& |||||| ||.||| &5' --GCACCC------CAGGGA- 3' HIC1 hsa-miR-502-5p beg:835 end:851 pic:3' ATCGTGGGTCTATCGTTCCTA 5'& |||| . |||||| &5' -AGCAGTAAC----CAAGGA- 3' HIC1 hsa-miR-508-5p beg:575 end:597 pic:3' GTACTCACTGCGGGAGACCTCAT 5'& |.| |. | .|||||||| &5' ---GGGCGGGGAGTTCTGGAGT- 3' HIC1 hsa-miR-513a-3p beg:206 end:227 pic:3' GGAAGAGTCT-TTCCACTTTAAAT 5'& | .|. |||| |||||||| &5' -----TGGGGTAAGG-GAAATTTA 3' HIC1 hsa-miR-513a-5p beg:269 end:287 pic:3' TACTGTGGAG--GGACACTT 5'& |.|||| ||||||. &5' ----CGCCTCTTCCTGTGG- 3' HIC1 hsa-miR-513a-5p beg:379 end:402 pic:3' TACTGTGG---AG-G-GACACTT 5'& ||||| || | ||||||| &5' ---ACACCCATTCTCACTGTGAA 3' HIC1 hsa-miR-515-3p beg:334 end:355 pic:3' TTGCGAGGTTTTC-TTCCGTGAG 5'& |. || ..||||||| &5' ---GTGTCACTGTCGGGGCACTC 3' HIC1 hsa-miR-525-5p beg:573 end:596 pic:3' TCTTTCACGTAGG--GAGACCTC 5'& ||.| ||. .||||||| &5' --AAGG-GCGGGGAGTTCTGGAG 3' HIC1 hsa-miR-542-3p beg:10 end:29 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||| |. ||||||.| &5' ---CAGCC--CGCTCTGTCGC- 3' HIC1 hsa-miR-548b-5p beg:658 end:681 pic:3' CCGGT-TTTGGTGTTAATGAAAA 5'& |||| ..||||.| |||.| &5' GGCCCCGGACCATATTTATT--- 3' HIC1 hsa-miR-548q beg:525 end:545 pic:3' GGCGGTAATGAAAACGTGGTCG 5'& .|| ||||.||| &5' -TGCACAAGTG---GCACTAGC 3' HIC1 hsa-miR-554 beg:712 end:731 pic:3' TGACCGACTCAGTCCTGATCG 5'& |||||.| | ||.||.| &5' ---GGCTGGG-CTGGGCTGG- 3' HIC1 hsa-miR-564 beg:73 end:93 pic:3' CGGA-CGACTGTGGCACGGA 5'& || || |||.||||| &5' GCAGGGCC--CACTGTGCC- 3' HIC1 hsa-miR-564 beg:146 end:168 pic:3' CGGAC-GACTGTGGCACGGA 5'& |||| ||| | .||||||| &5' GCCTCACTG-CTTCGTGCCT 3' HIC1 hsa-miR-584 beg:657 end:675 pic:3' GAGTCAGGGTCCGTTTGGTATT 5'& |.| ||| |..|||||| &5' --CGG-CCC---CGGACCATA- 3' HIC1 hsa-miR-597 beg:526 end:541 pic:3' TGTCACCAGTAGCTCACTGTGT 5'& || | ||||.||| &5' --------CA-CAAGTGGCAC- 3' HIC1 hsa-miR-604 beg:648 end:665 pic:3' CAGGACTTAAGGCGTCGGA 5'& ||| |.||.||| &5' --CCTTCC--CTGCGGCC- 3' HIC1 hsa-miR-610 beg:730 end:750 pic:3' AGGGTCGTGTGTAAATCGAGT 5'& | |.|. | | |||||||| &5' -CGCGGT-CTC-TTTAGCTC- 3' HIC1 hsa-miR-615-5p beg:452 end:475 pic:3' CTAGGCTCG--TGGCC-CCTGGGGG 5'& |.|||| .|||| ||.||||| &5' ---CTGAGCCGGCCGGAGGGCCCCC 3' HIC1 hsa-miR-624 beg:761 end:782 pic:3' TCCATTATGGTT-ATGGAACAC 5'& || |||.. |||||||| &5' --GT-ATATTTCCTACCTTGT- 3' HIC1 hsa-miR-631 beg:605 end:626 pic:3' CGACTCCAGACCCGGTCCAGA 5'& ||| |||||||| &5' ---GAGCCTACCACCAGGTCT 3' HIC1 hsa-miR-642 beg:314 end:332 pic:3' GTTCTGTGTAAACCTCTCCCTG 5'& .| || |||.|||| &5' ------GCTCTTAGAGGGGGA- 3' HIC1 hsa-miR-642 beg:428 end:452 pic:3' GTTCTGTGTAA-ACCTCTCCCTG 5'& .|| |||.|||||. &5' -GAGTTGGGGAGTGGGGAGGGG- 3' HIC1 hsa-miR-648 beg:633 end:650 pic:3' TGGTCACGGGACGTGTGAA 5'& |.||||||| | | ||| &5' --CGGTGCCCT-C-C-CTT 3' HIC1 hsa-miR-663 beg:256 end:277 pic:3' CGCCAGGGCGCCGC--GGGGCGGA 5'& ||| ||| .||||||| &5' -----CCCA-GGCCCCTCCCGCCT 3' HIC1 hsa-miR-663 beg:465 end:487 pic:3' CGCCA---GGGCGCCGCGGGGCGGA 5'& || ||||| | ||||||. &5' --GGGCCCCCCGCA-C-CCCCGCT- 3' HIC1 hsa-miR-664 beg:200 end:222 pic:3' ACATCCGACCCCTATTTACTTAT 5'& ||.|| ||||| |||. ||| &5' -GTGGGATGGGG-TAAGGGAA-- 3' HIC1 hsa-miR-675 beg:34 end:53 pic:3' GTGACAC-CCGGGAGA-GGCGTGGT 5'& | |||||| ||||||| &5' ------GCGGCCCTGGCCCGCACC- 3' HIC1 hsa-miR-718 beg:184 end:209 pic:3' GCTGCGGGCCG---CCCCGCCTTC 5'& || ||||| ||||.||.| &5' -GAACCCCGGGACGGGGGTGGGA- 3' HIC1 hsa-miR-744 beg:283 end:314 pic:3' ACGA-CAATCGGGA-------TCGGGGCGT 5'& |.| || |||| .||.|||| &5' -GTTCGTCGGCCCCCTCCCCCGGCTCCGC- 3' HIC1 hsa-miR-744star beg:427 end:451 pic:3' TC-CAACTCCAATCACCGTTGTC 5'& || ||||.|| ||||| .| .| &5' AGAGTTGGGG--AGTGGGGAGGG 3' HIC1 hsa-miR-759 beg:15 end:26 pic:3' CAGTTTTAACAAACGTGAGACG 5'& |.|||||. &5' --------------CGCTCTGT 3' HIC1 hsa-miR-760 beg:535 end:554 pic:3' AGGGGTG-TCTGGGTCTCGGC 5'& ||| || |||||.||| &5' ----CACTAGCCCCAGGGCC- 3' HIC1 hsa-miR-760 beg:780 end:803 pic:3' AGGGGTGTCTG----GGTCTCGGC 5'& |||||.| ||||||||| &5' ----CACAGGCTCTTCCAGAGCCG 3' HIC1 hsa-miR-769-5p beg:599 end:627 pic:3' TCGAGTCTTGGGTC----TCCAGAGT 5'& .|| |||.||.| ||||||| &5' GGCGAAGAGCCTACCACCAGGTCTC- 3' HIC1 hsa-miR-876-5p beg:203 end:227 pic:3' ACCACTAAGTG--TTTCTTTAGGT 5'& || ||| |..|||||..| &5' -GG-GATGGGGTAAGGGAAATTTA 3' HIC1 hsa-miR-876-5p beg:498 end:520 pic:3' ACCACTAAGTGTTT--CTTTAGGT 5'& || || | |.|| |||.|.| &5' -GG-GACTGATAATGTGAAGTTC- 3' HIC1 hsa-miR-877 beg:263 end:284 pic:3' GGGAC-GCGGTAGAGGAGATG 5'& |||| |||| |||.| ||. &5' CCCTCCCGCC-TCTTC-CTG- 3' HIC1 hsa-miR-886-5p beg:355 end:374 pic:3' GGCGAACTCGATTGAGGCTGGGC 5'& || ||| |||||.||| &5' --GCC----CTACCTCCGGCCC- 3' HIC1 hsa-miR-9 beg:233 end:255 pic:3' AGTAT-GTCGATCTATTGGTTTCT 5'& ||| ||||| |.|||||||. &5' --ATATCAGCTT--TGACCAAAGG 3' HIC1 hsa-miR-9 beg:831 end:851 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||| ||| || |||||||.|| &5' --ATAAAGC-AG-TAACCAAGGA 3' HIC1 hsa-miR-921 beg:142 end:158 pic:3' CTTAGGACCAAGACAGGGAGTGATC 5'& ||||| |||||||. &5' ----CCTGG-------CCTCACTG- 3' HIC1 hsa-miR-92a-2star beg:690 end:707 pic:3' CATTACGTTGTTTAGGGGTGGG 5'& ||..| |||||.|| &5' -----GCGGCC---CCCCATCC 3' HIC1 hsa-miR-936 beg:507 end:530 pic:3' GACGCT--AAGGAGGGAGATGACA 5'& ||.|| |||||| .|.|.| &5' -TGTGAAGTTCCTCATTTTGC--- 3' HIC1 hsa-miR-9star beg:225 end:247 pic:3' TGAAAGCCAATAGATCGAAATA 5'& |.|||.| |||| ||||||. &5' ATTTTTGA-TATC-AGCTTTG- 3' HIC1 hsv1-miR-H13 beg:346 end:364 pic:3' GGTCACGAGCGTGAAG--CGGGATT 5'& ||||| |||||| &5' ---------GCACTCCTAGCCCTA- 3' HIC1 hsv1-miR-H6-3p beg:423 end:444 pic:3' CCCTACCT-TC-CTGCCCTTCAC 5'& ||. || | .|||.|||| &5' -----GGGCAGAGTTGGGGAGTG 3' HIC1 hsv1-miR-H6-3p beg:573 end:589 pic:3' CCCTACCTTCCTGCCCTTCAC 5'& ||||.||||.||| &5' -------AAGGGCGGGGAGT- 3' HIC1 hsv1-miR-H7star beg:433 end:458 pic:3' CTTCTC-CCCAGCCCTAGGTTT 5'& |..||| ||| |||. | |. &5' GGGGAGTGGGGAGGGGACTGAG 3' HIC1 hsv2-miR-H10 beg:286 end:305 pic:3' GGCGGGTGGGGGCGTGGG 5'& ||.| .||||| | ||| &5' -CGTCGGCCCCCTCCCCC 3' HIC1 hsv2-miR-H10 beg:687 end:707 pic:3' GGCGGGTGGGGGCGTGGG 5'& ||| | .||||| ||.|| &5' CCGGCGGCCCCC-CATCC 3' HIC1 hsv2-miR-H20 beg:839 end:851 pic:3' TCTTTCCCCAGGCATTGGTTT 5'& ||||||||. &5' ------------GTAACCAAG 3' HIC1 hsv2-miR-H22 beg:257 end:270 pic:3' CGGGTGGGTGCAGGTCTGGGGA 5'& ||||.||||| &5' ------------CCAGGCCCCT 3' HIC1 hsv2-miR-H23 beg:713 end:741 pic:3' CGA-CCG-TTCGAG---GTGCCGGA 5'& ||| ||| ..||| |.|||.|| &5' GCTGGGCTGGGCTGGAACGCGGTCT 3' HIC1 hsv2-miR-H24 beg:191 end:214 pic:3' TCCC-GCCCCCCTTCCGCGGCCTC 5'& ||| |||||| .|| .||.| &5' -GGGACGGGGGT-GGGA--TGGGG 3' HIC1 hsv2-miR-H6 beg:637 end:657 pic:3' CGT-AGGGGAGCGGAAGGTAA 5'& || ||||.|| |||||| &5' GCCCTCCCTTC-CCTTCC--- 3' HIC1 kshv-miR-K12-10astar beg:250 end:267 pic:3' TCACCACCATAGC-GGGGTTCGG 5'& || | |||||.||| &5' ------GGA---GACCCCAGGCC 3' HIC1 kshv-miR-K12-1 beg:265 end:288 pic:3' CGAATGTGGGTCAAAGGACATTA 5'& || |.||. |||||||..| &5' -CTCCCGCCTC--TTCCTGTGGT 3' HIC1 kshv-miR-K12-12star beg:630 end:649 pic:3' AGTTGGTCCCGTGGGAGGGGGT 5'& ||. || |||||||.. &5' ----CCGCGGTGCCCTCCCTT- 3' HIC1 kshv-miR-K12-12star beg:743 end:758 pic:3' AGTTGGTCCCGTGGGAGGGGGT 5'& || ||||||.|. &5' ---------GCTCCCTCCTCT- 3' HIC1 kshv-miR-K12-3 beg:494 end:515 pic:3' AGCGACGGCAG-GAGTCTTACACT 5'& ||| || | ||||||| &5' ------CCGGGACTGATAATGTGA 3' HIC1 kshv-miR-K12-3star beg:382 end:401 pic:3' ACAGTGTAAGACACTGGCGCT 5'& | |||||| ||.|.|| &5' ---CCCATTCTC--ACTGTGA 3' HIC1 kshv-miR-K12-8star beg:314 end:333 pic:3' TCGCCCCGC-AATCACTCCCTCA 5'& || |||| |.||||| &5' ------GCTCTTAGAGGGGGAG- 3' HIC1 sv40-miR-S1-5p beg:248 end:271 pic:3' TTCCGAGTAAAGTCCGGGGAGT 5'& |||| |||||||||| &5' AAGGAGACCC-CAGGCCCCTC- 3'

DNA & RNA Element - SomamiR Gene Name Mutation Mutation ID miR ID Chromosome Location Ref Alt mirsite mirseed Seed Class Sample Name Cancer Type HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-3152-3p chr17 2058444 G A cagcAACACAacctc UGUGUUAG m6a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-323b-5p chr17 2058444 G A cagcaacACAACCTc AGGUUGUC m7a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-410-5p chr17 2058444 G A cagcaacACAACCTc AGGUUGUC m7a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-494-5p chr17 2058444 G A cagcaacACAACCTc AGGUUGUC m7a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-5010-3p chr17 2058444 G A cagcaACACAAcctc UUUUGUGU m6c 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-581 chr17 2058444 G A cagcaACACAAcctc UCUUGUGU m6c 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-592 chr17 2058444 G A cagcaACACAAcctc UUGUGUCA m6a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-599 chr17 2058444 G A cagcaACACAACctc GUUGUGUC m7a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-653-5p chr17 2058444 G A cagCAACACaacctc GUGUUGAA m6a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-656-5p chr17 2058444 G A cagcaacGCAACCTc AGGUUGCC m7a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-6818-5p chr17 2058444 G A cagcaACACAAcctc UUGUGUGA m6a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-6854-3p chr17 2058444 G A cagcAACGCAacctc UGCGUUUC m6a 587284 [large_intestine][colon][carcinoma][adenocarcinoma] HIC1 chr17:g.2058444G>A COSM1209659 hsa-miR-744-3p chr17 2058444 G A caGCAACAcaacctc CUGUUGCC m6b 587284 [large_intestine][colon][carcinoma][adenocarcinoma]

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region HIC1 High_conserved miR-503 chr17:1960637 7-mer-m8 31 CDS HIC1 High_conserved miR-503 chr17:1962162 7-mer-m8 11 3pUTR HIC1 High_conserved miR-503 chr17:1962449 7-mer-m8 16 3pUTR HIC1 High_conserved miR-7/7ab chr17:1962925 7-mer-A1 29 3pUTR HIC1 High_conserved miR-133abc chr17:1962381 7-mer-A1 44 3pUTR HIC1 High_conserved miR-9/9ab chr17:1962383 7-mer-m8 47 3pUTR HIC1 High_conserved miR-137/137ab chr17:1962966 8-mer 67 3pUTR HIC1 High_conserved miR-138/138ab chr17:1958432 7-mer-A1 31 5pUTR HIC1 High_conserved miR-150/5127 chr17:1961432 7-mer-A1 20 CDS HIC1 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr17:1960032 7-mer-m8 40 CDS HIC1 High_conserved let-7/98/4458/4500 chr17:1960144 8-mer 53 CDS HIC1 High_conserved let-7/98/4458/4500 chr17:1962497 7-mer-m8 49 3pUTR HIC1 High_conserved miR-187 chr17:1959997 7-mer-A1 44 CDS HIC1 High_conserved miR-193/193b/193a-3p chr17:1961654 7-mer-A1 60 CDS HIC1 High_conserved miR-19ab chr17:1962661 8-mer 64 3pUTR HIC1 High_conserved miR-204/204b/211 chr17:1962350 7-mer-A1 11 3pUTR HIC1 High_conserved miR-210 chr17:1960112 7-mer-A1 38 CDS HIC1 High_conserved miR-22/22-3p chr17:1960026 7-mer-m8 51 CDS HIC1 High_conserved miR-122/122a/1352 chr17:1960018 7-mer-A1 20 CDS HIC1 High_conserved miR-23abc/23b-3p chr17:1962644 8-mer 64 3pUTR HIC1 High_conserved miR-24/24ab/24-3p chr17:1960299 7-mer-m8 20 CDS HIC1 High_conserved miR-24/24ab/24-3p chr17:1961912 7-mer-m8 38 CDS HIC1 High_conserved miR-24/24ab/24-3p chr17:1962068 8-mer 51 CDS HIC1 High_conserved miR-24/24ab/24-3p chr17:1962589 7-mer-m8 53 3pUTR HIC1 High_conserved miR-27abc/27a-3p chr17:1962530 8-mer 53 3pUTR HIC1 High_conserved miR-29abcd chr17:1960221 7-mer-m8 42 CDS HIC1 High_conserved miR-103a/107/107ab chr17:1960034 7-mer-A1 42 CDS HIC1 High_conserved miR-124/124ab/506 chr17:1962298 8-mer 53 3pUTR HIC1 High_conserved miR-338/338-3p chr17:1959992 8-mer 64 CDS HIC1 High_conserved miR-338/338-3p chr17:1960223 7-mer-A1 42 CDS HIC1 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr17:1960397 7-mer-A1 44 CDS HIC1 High_conserved miR-128/128ab chr17:1962220 7-mer-m8 7 3pUTR HIC1 High_conserved miR-128/128ab chr17:1962529 8-mer 53 3pUTR HIC1 Medium_conserved miR-544/544ab/544-3p chr17:1960092 7-mer-m8 60 CDS HIC1 Medium_conserved miR-653 chr17:1960043 7-mer-A1 44 CDS HIC1 Medium_conserved miR-134/3118 chr17:1962704 7-mer-m8 0 3pUTR HIC1 Medium_conserved miR-873 chr17:1959617 7-mer-A1 38 CDS HIC1 Medium_conserved miR-874 chr17:1961852 7-mer-A1 44 CDS HIC1 Medium_conserved miR-149 chr17:1962070 7-mer-m8 51 CDS HIC1 Medium_conserved miR-185/882/3473/4306/4644 chr17:1962123 7-mer-m8 33 CDS HIC1 Medium_conserved miR-202-3p chr17:1960144 7-mer-A1 53 CDS HIC1 Medium_conserved miR-296-3p chr17:1962689 7-mer-m8 40 3pUTR HIC1 Medium_conserved miR-300/381/539-3p chr17:1962897 7-mer-A1 62 3pUTR HIC1 Medium_conserved miR-320abcd/4429 chr17:1962375 7-mer-m8 38 3pUTR HIC1 Medium_conserved miR-326/330/330-5p chr17:1960552 7-mer-m8 4 CDS HIC1 Medium_conserved miR-328a/328b-3p chr17:1962684 8-mer 49 3pUTR HIC1 Medium_conserved miR-346 chr17:1959984 7-mer-m8 47 CDS, 5pUTR HIC1 Medium_conserved miR-361-5p chr17:1962638 7-mer-A1 58 3pUTR HIC1 Medium_conserved miR-370 chr17:1958435 8-mer 31 5pUTR HIC1 Medium_conserved miR-370 chr17:1961924 8-mer 60 CDS HIC1 Medium_conserved miR-125a-3p/1554 chr17:1962082 7-mer-m8 20 CDS HIC1 Medium_conserved miR-125a-3p/1554 chr17:1962278 7-mer-m8 33 3pUTR HIC1 Medium_conserved miR-127/127-3p chr17:1958495 7-mer-m8 44 5pUTR

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score HIC1 RAID00002474 hsa-miR-6077 miRNA MIMAT0023702 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00021621 hsa-miR-6811-3p miRNA MIMAT0027523 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00072002 hsa-let-7a-5p miRNA MIMAT0000062 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6308 HIC1 RAID00075843 hsa-miR-1227-3p miRNA MIMAT0005580 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00205829 hsa-miR-6785-5p miRNA MIMAT0027470 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00231355 hsa-miR-4779 miRNA MIMAT0019938 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00301048 hsa-miR-409-5p miRNA MIMAT0001638 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00366524 hsa-miR-320d miRNA MIMAT0006764 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00415041 hsa-miR-3915 miRNA MIMAT0018189 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00435510 hsa-miR-149-3p miRNA MIMAT0004609 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00435897 hsa-miR-873-5p miRNA MIMAT0004953 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6308 HIC1 RAID00538166 hsa-miR-1260b miRNA MIMAT0015041 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00544209 hsa-miR-518c-5p miRNA MIMAT0002847 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00571253 hsa-miR-4743-5p miRNA MIMAT0019874 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00595387 hsa-let-7b-3p miRNA MIMAT0004482 HIC1 mRNA 3090 Prediction 0.2202 HIC1 RAID00681728 hsa-let-7c-5p miRNA MIMAT0000064 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6308 HIC1 RAID00700886 hsa-miR-4292 miRNA MIMAT0016919 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00734286 hsa-miR-6512-3p miRNA MIMAT0025481 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00839654 hsa-miR-4532 miRNA MIMAT0019071 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00854628 hsa-miR-98-5p miRNA MIMAT0000096 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6478 HIC1 RAID00912353 hsa-miR-920 miRNA MIMAT0004970 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00947329 hsa-miR-95-5p miRNA MIMAT0026473 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00958759 hsa-miR-4533 miRNA MIMAT0019072 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID00995154 hsa-miR-6784-5p miRNA MIMAT0027468 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01091933 hsa-miR-4781-5p miRNA MIMAT0019942 HIC1 mRNA 3090 PAR-CLIP//Prediction 0.6308 HIC1 RAID01107595 hsa-let-7g-5p miRNA MIMAT0000414 HIC1 mRNA 3090 RT-PCR//CLIP-seq//Prediction 0.9007 HIC1 RAID01179129 hsa-miR-7-5p miRNA MIMAT0000252 HIC1 mRNA 3090 CLIP-seq 0.5483 HIC1 RAID01219109 hsa-miR-335-5p miRNA MIMAT0000765 HIC1 mRNA 3090 Microarray 0.5483 HIC1 RAID01236681 hsa-miR-6775-3p miRNA MIMAT0027451 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01256406 hsa-miR-6777-5p miRNA MIMAT0027454 HIC1 mRNA 3090 PAR-CLIP//Prediction 0.6308 HIC1 RAID01285463 hsa-miR-6090 miRNA MIMAT0023715 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01289924 hsa-let-7e-5p miRNA MIMAT0000066 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6308 HIC1 RAID01364556 hsa-miR-182-5p miRNA MIMAT0000259 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6308 HIC1 RAID01369334 hsa-miR-9-5p miRNA MIMAT0000441 HIC1 mRNA 3090 Prediction 0.2455 HIC1 RAID01382680 hsa-miR-6720-5p miRNA MIMAT0027345 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01385519 hsa-miR-19a-3p miRNA MIMAT0000073 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6559 HIC1 RAID01432012 hsa-miR-328-5p miRNA MIMAT0026486 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01487571 hsa-miR-506-3p miRNA MIMAT0002878 HIC1 mRNA 3090 Prediction 0.2381 HIC1 RAID01487578 hsa-miR-300 miRNA MIMAT0004903 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01506099 hsa-miR-24-3p miRNA MIMAT0000080 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01520398 hsa-miR-4458 miRNA MIMAT0018980 HIC1 mRNA 3090 CLIP-seq 0.5483 HIC1 RAID01522483 hsa-miR-1249-5p miRNA MIMAT0032029 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01574808 hsa-miR-1913 miRNA MIMAT0007888 HIC1 mRNA 3090 PAR-CLIP 0.5483 HIC1 RAID01622961 hsa-miR-4500 miRNA MIMAT0019036 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6308 HIC1 RAID01695856 hsa-miR-216a-3p miRNA MIMAT0022844 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01809945 hsa-miR-1299 miRNA MIMAT0005887 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01815087 hsa-miR-3175 miRNA MIMAT0015052 HIC1 mRNA 3090 PAR-CLIP//Prediction 0.6308 HIC1 RAID01825225 hsa-miR-6781-5p miRNA MIMAT0027462 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01952628 hsa-miR-6756-5p miRNA MIMAT0027412 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID01952973 hsa-miR-23c miRNA MIMAT0018000 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6478 HIC1 RAID01995930 hsa-miR-6852-5p miRNA MIMAT0027604 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02076655 hsa-miR-8065 miRNA MIMAT0030992 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02241898 hsa-miR-18a-3p miRNA MIMAT0002891 HIC1 mRNA 3090 PAR-CLIP 0.5483 HIC1 RAID02267383 hsa-miR-1291 miRNA MIMAT0005881 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02320268 hsa-let-7a-3p miRNA MIMAT0004481 HIC1 mRNA 3090 Prediction 0.2202 HIC1 RAID02328222 hsa-miR-6778-5p miRNA MIMAT0027456 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02366742 hsa-miR-4749-5p miRNA MIMAT0019885 HIC1 mRNA 3090 PAR-CLIP 0.5483 HIC1 RAID02393608 hsa-miR-6883-5p miRNA MIMAT0027666 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02413208 hsa-miR-130a-5p miRNA MIMAT0004593 HIC1 mRNA 3090 Prediction 0.2202 HIC1 RAID02432708 hsa-let-7b-5p miRNA MIMAT0000063 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6308 HIC1 RAID02436108 hsa-let-7f-1-3p miRNA MIMAT0004486 HIC1 mRNA 3090 Prediction 0.2202 HIC1 RAID02516465 hsa-miR-320a miRNA MIMAT0000510 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02548578 hsa-miR-144-5p miRNA MIMAT0004600 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02651566 hsa-miR-296-3p miRNA MIMAT0004679 HIC1 mRNA 3090 CLIP-seq 0.5483 HIC1 RAID02656861 hsa-miR-3202 miRNA MIMAT0015089 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02672024 hsa-miR-6885-5p miRNA MIMAT0027670 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02693507 hsa-miR-4316 miRNA MIMAT0016867 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02734330 hsa-miR-137 miRNA MIMAT0000429 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6592 HIC1 RAID02791226 hsa-miR-140-3p miRNA MIMAT0004597 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02839833 hsa-miR-202-3p miRNA MIMAT0002811 HIC1 mRNA 3090 CLIP-seq 0.5483 HIC1 RAID02857639 hsa-miR-3177-5p miRNA MIMAT0019215 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02892098 hsa-miR-6726-5p miRNA MIMAT0027353 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02925179 hsa-miR-361-5p miRNA MIMAT0000703 HIC1 mRNA 3090 CLIP-seq 0.5483 HIC1 RAID02933119 hsa-miR-6791-5p miRNA MIMAT0027482 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID02938640 hsa-miR-381-3p miRNA MIMAT0000736 HIC1 mRNA 3090 Prediction 0.2202 HIC1 RAID02943804 hsa-let-7i-5p miRNA MIMAT0000415 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6308 HIC1 RAID02959915 hsa-miR-6889-5p miRNA MIMAT0027678 HIC1 mRNA 3090 PAR-CLIP//Prediction 0.6308 HIC1 RAID02964047 hsa-miR-4455 miRNA MIMAT0018977 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03010000 hsa-miR-320b miRNA MIMAT0005792 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03023287 hsa-let-7d-5p miRNA MIMAT0000065 HIC1 mRNA 3090 RT-PCR//CLIP-seq//Prediction 0.9007 HIC1 RAID03039915 hsa-miR-4449 miRNA MIMAT0018968 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03099369 hsa-miR-6766-5p miRNA MIMAT0027432 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03130240 hsa-miR-320c miRNA MIMAT0005793 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03261414 hsa-miR-4300 miRNA MIMAT0016853 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03296062 hsa-miR-23b-3p miRNA MIMAT0000418 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6478 HIC1 RAID03331640 hsa-miR-324-3p miRNA MIMAT0000762 HIC1 mRNA 3090 PAR-CLIP 0.5483 HIC1 RAID03342580 hsa-miR-23a-3p miRNA MIMAT0000078 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6478 HIC1 RAID03447234 hsa-miR-6788-5p miRNA MIMAT0027476 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03497663 hsa-miR-6797-5p miRNA MIMAT0027494 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03508948 hsa-miR-98-3p miRNA MIMAT0022842 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03563205 hsa-miR-134-5p miRNA MIMAT0000447 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03583640 hsa-miR-5591-5p miRNA MIMAT0022301 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03591128 hsa-miR-328-3p miRNA MIMAT0000752 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6559 HIC1 RAID03608359 hsa-miR-128-3p miRNA MIMAT0000424 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6559 HIC1 RAID03645114 hsa-let-7f-5p miRNA MIMAT0000067 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6308 HIC1 RAID03729485 hsa-miR-624-3p miRNA MIMAT0004807 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03742854 hsa-miR-4728-5p miRNA MIMAT0019849 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03744117 hsa-miR-19b-3p miRNA MIMAT0000074 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6592 HIC1 RAID03758764 hsa-miR-1260a miRNA MIMAT0005911 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03777958 hsa-miR-6741-3p miRNA MIMAT0027384 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID03825572 hsa-miR-3681-3p miRNA MIMAT0018109 HIC1 mRNA 3090 Prediction 0.2202 HIC1 RAID03858041 hsa-miR-27b-3p miRNA MIMAT0000419 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6592 HIC1 RAID03901958 hsa-miR-27a-3p miRNA MIMAT0000084 HIC1 mRNA 3090 CLIP-seq//Prediction 0.6559 HIC1 RAID03950888 hsa-miR-124-3p miRNA MIMAT0000422 HIC1 mRNA 3090 Prediction 0.2381 HIC1 RAID03985770 hsa-miR-4706 miRNA MIMAT0019806 HIC1 mRNA 3090 PAR-CLIP 0.5483 HIC1 RAID04032046 hsa-miR-1233-5p miRNA MIMAT0022943 HIC1 mRNA 3090 Prediction 0.1828 HIC1 RAID04191211 FENDRR lncRNA 400550 HIC1 protein 3090 Microarray//RNA-seq 0.6606