RNF151
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004983hsa-miR-940146310RNF151cccCUCGCCCCCGGGACGGAa || | || ||||||| gcaGACCCCCGG-CCUGCCUg2191130[hg19:16:2018937-2018956:+]0.56561447-16.23-0.1067
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G035974RNF151Homo sapiens146310
DNA & RNA Element - TargetScan
Gene NameUTR Region StartUTR Region EndAIRTotal Normalized 3P-seq-tags & PseudocountsStrandhg19_chromosomeGenome StartGenome End
RNF1511501005.01+chr1620189262018976
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
RNF151hsa-miR-940beg:18end:30pic:3' CCCCTCGCCCCCGGGACGGAA 5'& || ||||||| &5' ----------GG-CCTGCCT- 3'
RNF151hsa-miR-1827beg:17end:35pic:3' TAAGTTAGAT-GACGGAGT 5'& |. ||. ||||||| &5' ---CGGCCTGCCTGCCTC- 3'
RNF151hsa-let-7bbeg:14end:35pic:3' TTGGTGTGTTGGAT-GATGGAGT 5'& ||| | |..|||. ||.|||| &5' -ACCCC-CGGCCTGCCTGCCTC- 3'
RNF151hsa-let-7ebeg:17end:35pic:3' TTGATATGTTGGA-GGATGGAGT 5'& |..||| |||.|||| &5' -------CGGCCTGCCTGCCTC- 3'
RNF151hsa-let-7ibeg:17end:35pic:3' TTGTCGTGTTTGAT-GATGGAGT 5'& |.|| ||. ||.|||| &5' --CGGC-----CTGCCTGCCTC- 3'
RNF151hsa-miR-214beg:21end:44pic:3' TGACGGAC--AGACACGGACGACA 5'& ||||||| ||||||||||| &5' -CTGCCTGCCTCTGTGCCTGC--- 3'
RNF151hsa-miR-214beg:25end:44pic:3' TGACGGAC--AGACACGGACGACA 5'& ||||| ||||||||||| &5' ---GCCTGCCTCTGTGCCTGC--- 3'
RNF151hsa-miR-2276beg:24end:46pic:3' GGAGCGGAGACTGTGAACGTCT 5'& ||| ||||||| ..| |||.| &5' CCT-GCCTCTG-TGCCTGCGG- 3'
RNF151hsa-miR-4253beg:12end:30pic:3' TGGGGGACCTGTACGGGA 5'& |||||| || | ||||. &5' ACCCCC-GG-CCTGCCT- 3'
RNF151hsa-miR-4269beg:19end:44pic:3' CGGTCCCGAC--AGACACGGACG 5'& ||| | ||| ||||||||||| &5' GCCT-GCCTGCCTCTGTGCCTGC 3'
RNF151hsa-miR-4299beg:27end:47pic:3' CGGAGAGTACAGTGGTCG 5'& |||||| .|| | |.|| &5' GCCTCT-GTGCCTGCGGC 3'
RNF151hsa-miR-564beg:19end:42pic:3' CGGAC-GACTGTGGCACGGA 5'& ||||| ||| | |.|||||| &5' GCCTGCCTGCCTCTGTGCCT 3'
RNF151hsa-miR-604beg:28end:48pic:3' CAGGACTTAA-GGCGTCGGA 5'& ||| .| |.||.||| &5' --CCTCTGTGCCTGCGGCC- 3'
RNF151hsa-miR-650beg:16end:36pic:3' CAGGACTCTCGCGACGGAGGA 5'& || || |||||||. &5' --CCGGCCTGC-CTGCCTCT- 3'
RNF151hsa-miR-658beg:15end:38pic:3' TGGTTGCCTGGATGAAGGGAGGCGG 5'& || ||| |||.| | ||||.|. &5' -CCCCCGG-CCTGCCTGCCTCTGT- 3'
RNF151hsa-miR-886-5pbeg:7end:27pic:3' GGCGAACTCGATTGA-GGCTGGGC 5'& ||| .|| |||.||.| &5' -------AGCAGACCCCCGGCCTG 3'
RNF151kshv-miR-K12-8beg:27end:43pic:3' ACGAGAGAGTCAGCGCGGATC 5'& || |||| |.||||. &5' -GC-CTCT-----GTGCCTG- 3'
DNA & RNA Element - miRcode
Gene NameTypemicroRNASeed PositionSeed TypeTotal Cons%Tr Region
RNF151High_conservedmiR-133abcchr16:20187627-mer-m803pUTR, CDS
RNF151High_conservedmiR-146ac/146b-5pchr16:20173537-mer-A144CDS
RNF151High_conservedmiR-15abc/16/16abc/195/322/424/497/1907chr16:20187287-mer-m8273pUTR, CDS
RNF151High_conservedmiR-214/761/3619-5pchr16:20187267-mer-m8293pUTR, CDS
RNF151High_conservedmiR-338/338-3pchr16:20188327-mer-A1113pUTR, CDS
RNF151High_conservedmiR-129-5p/129ab-5pchr16:20173977-mer-m820CDS
RNF151Medium_conservedmiR-149chr16:20177267-mer-A138CDS
RNF151Medium_conservedmiR-224chr16:20180017-mer-m8293pUTR
RNF151Medium_conservedmiR-328a/328b-3pchr16:20189108-mer363pUTR, CDS
RNF151Medium_conservedmiR-377chr16:20179987-mer-m8293pUTR
RNF151Medium_conservedmiR-384/384-3pchr16:20177537-mer-A116CDS
RNF151Medium_conservedmiR-491-5pchr16:20188447-mer-A193pUTR, CDS