DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome HOXB4 3'UTR 70281f69c9 BA050585 NM_024015 chr17:44007868-44009318:- HOXB4 5'UTR 70281f69c9 CA078304 NM_024015 chr17:44008565-44010742:-

DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence HOXB4; HOX2F ATTTA 63-818 989-993 HOXB4; HOX2F WTATTTATW 63-818 987-995 HOXB4; HOX2F WWATTTAWW 63-818 987-995

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0044362 chr17 46652868 46655743 -

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-HOXB4.1 NM_024015Tchr17:46652868-46655743 none HOXB4 3214 protein-coding - hsa_circ_0044362

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT052567 hsa-let-7a-5p Homo sapiens HOXB4 3214 Homo sapiens CLASH Functional MTI (Weak) 23622248 MIRT437889 hsa-miR-23a-3p Homo sapiens HOXB4 3214 Homo sapiens Luciferase reporter assay//Western blot Functional MTI 23630040

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0010195 hsa-let-7a-2* 3214 HOXB4 ccUUUCGAUCCUCCGACAUGUc | | || | : |||||||| gaAUAUCU-GUGUGCUGUACAg 2 21 1154 1174 [hg19:17:46652910-46652930:-] 0.6324 150 7 -18.02 -0.3181 MIMAT0002891 hsa-miR-18a* 3214 HOXB4 ggucuuccucGUGAAUCCC-GUCa |||| |||| ||| cgugcccauuCACUGAGGGCCAGa 2 14 628 651 [hg19:17:46653433-46653456:-] 0.5236 121 0 -17.22 -0.6030 MIMAT0000088 hsa-miR-30a* 3214 HOXB4 cgacguuuguAGG--CUGACUUUc ||| |||||||| gaagccucucUCCUAGACUGAAAa 2 13 898 921 [hg19:17:46653163-46653186:-] 0.5380 147 7 -12.65 -0.7298 MIMAT0004514 hsa-miR-29b-1* 3214 HOXB4 agauuuGGUGGU-AUACUUUGGUCg |:: || | ||||||| cucuuuCUGACAUUCCAAAACCAGg 2 19 1080 1104 [hg19:17:46652980-46653004:-] 0.6016 141 7 -15.00 -0.2140 MIMAT0009196 hsa-miR-103-2* 3214 HOXB4 guucCGUCG-UGACAUUUCU-UCGa || || :||| :|||| ||| uacuGCCGCUGCUG-GAAGACAGCc 2 20 492 515 [hg19:17:46653569-46653592:-] 0.5871 120 0 -14.28 -0.1804 MIMAT0004518 hsa-miR-16-2* 3214 HOXB4 auuUCGUCGUGUC-AUUAUAAcc | :| :|: | ||||||| auuAUUAUUAUUGAUAAUAUUau 3 20 1016 1038 [hg19:17:46653046-46653068:-] 0.5771 130 0 -3.14 -0.1508 MIMAT0004550 hsa-miR-30c-2* 3214 HOXB4 ucucAUUUGUCGGAAGAGGGUc |: | |||| ||||||| auguUGCAGAGCCCUCUCCCAu 2 19 972 993 [hg19:17:46653091-46653112:-] 0.5681 162 7 -18.72 -0.2860 MIMAT0004551 hsa-miR-30d* 3214 HOXB4 cgucguuuguaGA-CUGACUUUc || |||||||| aagccucucucCUAGACUGAAAa 2 12 899 921 [hg19:17:46653163-46653185:-] 0.5380 146 7 -13.85 -0.7298 MIMAT0000260 hsa-miR-182* 3214 HOXB4 aucaaccGUUCAGAUCUUGGu ::||||||||||| ggcugcuUGAGUCUAGAACCc 2 15 1122 1142 [hg19:17:46652942-46652962:-] 0.6098 162 7 -20.54 -0.3382 MIMAT0004584 hsa-let-7g* 3214 HOXB4 cguuccGUCACCGGACAUGUc | ||| ||||||| gaauauCUGUGUGCUGUACAg 2 16 1154 1174 [hg19:17:46652910-46652930:-] 0.6324 151 7 -17.57 -0.3181 MIMAT0004589 hsa-miR-30b* 3214 HOXB4 cuucaUUUGUAGGUGGAGGGUc |||::| | ||||||| aaauaAAAUGUGCCCCUCCCAg 2 18 938 959 [hg19:17:46653125-46653146:-] 0.5485 161 7 -22.46 -0.1540 MIMAT0004593 hsa-miR-130a* 3214 HOXB4 cgUCUGUCAUCGUGUUACACUu |||| | | ||||||| cuAGACUGAAAAUGAAUGUGAa 2 21 910 931 [hg19:17:46653153-46653174:-] 0.5380 152 7 -14.39 -0.8543 MIMAT0004596 hsa-miR-138-2* 3214 HOXB4 uugggaccacagCACUUUAUCg | ||||||| aaaagacagaaaGAGAAAUAGg 2 11 287 308 [hg19:17:46653776-46653797:-] 0.5542 142 7 -7.14 -0.5256 MIMAT0004596 hsa-miR-138-2* 3214 HOXB4 uugggacCACAG-CA-CUUUAUcg ||| | | |||||| guacagaGUGACAAUAGAAAUAaa 3 16 1169 1192 [hg19:17:46652892-46652915:-] 0.6501 121 0 -7.65 -0.1288 MIMAT0004598 hsa-miR-141* 3214 HOXB4 agguugugacaugaCCUUCUac |||||| aaaagcaagaagaaGGAAGAaa 3 9 263 284 [hg19:17:46653800-46653821:-] 0.5068 120 0 -9.67 -0.1000 MIMAT0000433 hsa-miR-142-5p 3214 HOXB4 ucaucacgaaagaUGAAAUAc ||||||| ugcccucccccacACUUUAUa 2 9 114 134 [hg19:17:46653950-46653970:-] 0.5293 140 7 -5.61 -0.3833 MIMAT0004600 hsa-miR-144* 3214 HOXB4 gaauguCAUAUACUAC-UAUAGg ||||:|| || ||||| cccuucGUAUGUG-UGAAUAUCu 2 17 1140 1161 [hg19:17:46652923-46652944:-] 0.6146 126 0 -15.43 -0.4147 MIMAT0000442 hsa-miR-9* 3214 HOXB4 ugaaagccaauagaUCGAAAUa ||||||| agagggggaggggaAGCUUUAu 2 9 151 172 [hg19:17:46653912-46653933:-] 0.5899 140 7 -9.89 -0.6008 MIMAT0004609 hsa-miR-149* 3214 HOXB4 cgUGUCGGGGGCAGGGAGGGa | | |: :| ||||||| aaAAAUCUAUCUGCCCUCCCc 2 20 103 123 [hg19:17:46653961-46653981:-] 0.5245 147 7 -20.67 -0.1388 MIMAT0004609 hsa-miR-149* 3214 HOXB4 cgugucggggGCAGGGAGGGa :| ||||||| aaauaaaaugUGCCCCUCCCa 2 12 938 958 [hg19:17:46653126-46653146:-] 0.5485 143 7 -17.99 -0.4805 MIMAT0004615 hsa-miR-195* 3214 HOXB4 ccUCGUCGUGUCGGUUAUAAcc | :| :|: | :|||||| uuAUUAUUAUUGAUAAUAUUau 3 21 1017 1038 [hg19:17:46653046-46653067:-] 0.5771 132 0 -3.84 -0.1523 MIMAT0004674 hsa-miR-30c-1* 3214 HOXB4 ccucAUUUGUUGGGAGAGGGUc |: | |:|||||||||| auguUGCAGAGCCCUCUCCCAu 2 19 972 993 [hg19:17:46653091-46653112:-] 0.5681 166 7 -23.77 -0.2885 MIMAT0004680 hsa-miR-130b* 3214 HOXB4 caUCACGUUGUCCCUUUCUCa || || | ||||||| aaAGAAAAAGACAGAAAGAGa 2 20 282 302 [hg19:17:46653782-46653802:-] 0.5068 147 7 -10.60 -1.0193 MIMAT0000693 hsa-miR-30e* 3214 HOXB4 cgacauuuguAGG--CUGACUUUc ||| |||||||| gaagccucucUCCUAGACUGAAAa 2 13 898 921 [hg19:17:46653163-46653186:-] 0.5380 147 7 -11.42 -0.7298 MIMAT0000721 hsa-miR-369-3p 3214 HOXB4 uuuCUAGUUGGUACAUAAUAa | | |:|:| |||||| uauGUUGCAUCGUUUAUUAUu 2 19 1001 1021 [hg19:17:46653063-46653083:-] 0.5771 126 6 -8.50 -0.1101 MIMAT0000721 hsa-miR-369-3p 3214 HOXB4 uuucUAGUUGGUA-CAUAAUAa ||::|: || |||||| uauuAUUGAUAAUAUUAUUAUu 2 18 1021 1042 [hg19:17:46653042-46653063:-] 0.5771 124 6 -5.06 -0.1124 MIMAT0004688 hsa-miR-374a* 3214 HOXB4 uuAAUGUUAUGUUA-GACUAUUc |||: || :| | :|||||| guUUAUUAU-UAUUAUUGAUAAu 2 21 1012 1033 [hg19:17:46653051-46653072:-] 0.5771 137 6 -4.98 -0.2070 MIMAT0004697 hsa-miR-151-5p 3214 HOXB4 ugaUCUGACACUCGAGGAGCu ||:||| ||||||||| aggAGGCUG-CAGCUCCUCGu 2 19 309 328 [hg19:17:46653756-46653775:-] 0.6015 164 7 -27.55 -0.1511 MIMAT0004748 hsa-miR-423-5p 3214 HOXB4 uuucagagcgagAGACGGGGAGu | |||||||| uaggaaauaaaaUGUGCCCCUCc 2 12 934 956 [hg19:17:46653128-46653150:-] 0.5485 147 7 -17.08 -0.3884 MIMAT0002173 hsa-miR-483-3p 3214 HOXB4 uucugcccuccucUCCUCACu ||||||| gccuugacaacucAGGAGUGa 2 9 726 746 [hg19:17:46653338-46653358:-] 0.5325 140 7 -13.84 -0.3930 MIMAT0002808 hsa-miR-511 3214 HOXB4 acugacgUCUCGUUUUCUGUg | || |||||||| aaggaagAAAGAAAAAGACAg 2 15 275 295 [hg19:17:46653789-46653809:-] 0.5068 154 7 -11.45 -0.8000 MIMAT0002812 hsa-miR-492 3214 HOXB4 uucuUAGAA--CAGGGC-GUCCAGGa ||||| || || ||||||| uuucAUCUUUAAUCACGCCAGGUCCa 2 20 357 382 [hg19:17:46653702-46653727:-] 0.7175 157 7 -20.40 -0.5568 MIMAT0002831 hsa-miR-519c-5p 3214 HOXB4 guCUUUCGCGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -20.59 -0.4890 MIMAT0002833 hsa-miR-520a-5p 3214 HOXB4 ucuuucAUGAAGG-GA-GACCUc |||| || || ||||| cucugcUACUGCCGCUGCUGGAa 2 16 486 508 [hg19:17:46653576-46653598:-] 0.5871 122 0 -14.34 -0.1415 MIMAT0005454 hsa-miR-519b-5p 3214 HOXB4 guCUUUCGCGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -20.59 -0.4890 MIMAT0005449 hsa-miR-523* 3214 HOXB4 guCUUUCGCGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -20.59 -0.4890 MIMAT0002841 hsa-miR-518f* 3214 HOXB4 cuCUUUCACGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -14.02 -0.4924 MIMAT0002845 hsa-miR-526a 3214 HOXB4 guCUUUCACGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -18.27 -0.4924 MIMAT0005455 hsa-miR-520c-5p 3214 HOXB4 guCUUUCACGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -18.27 -0.4924 MIMAT0005450 hsa-miR-518e* 3214 HOXB4 guCUUUCGCGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -20.59 -0.4890 MIMAT0005456 hsa-miR-518d-5p 3214 HOXB4 guCUUUCACGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -18.27 -0.4924 MIMAT0005451 hsa-miR-522* 3214 HOXB4 guCUUUCGCGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -20.59 -0.4890 MIMAT0005452 hsa-miR-519a* 3214 HOXB4 guCUUUCGCGAAGGGA-GAUCUc | |: || ||:|| ||||| caGCAGAAGCCUCUCUCCUAGAc 2 21 893 915 [hg19:17:46653169-46653191:-] 0.5380 124 0 -20.59 -0.4890 MIMAT0003222 hsa-miR-558 3214 HOXB4 uaaaaccaUGUCGUCGAGu :| ||||||| aggaggagGCUGCAGCUCc 2 12 306 324 [hg19:17:46653760-46653778:-] 0.6015 143 7 -15.94 -0.2573 MIMAT0004795 hsa-miR-574-5p 3214 HOXB4 ugUGUGAGUGUGUGUGUGUGAGu ||: | |||||||||||||| ucACGGUAACACACACACACUCu 2 22 594 616 [hg19:17:46653468-46653490:-] 0.5892 185 7 -33.39 -0.5373 MIMAT0003243 hsa-miR-578 3214 HOXB4 uguuaggaUCUCGUGUUCUUc | | :|||||| agaaaaagAAAAAGCAAGAAg 2 14 254 274 [hg19:17:46653810-46653830:-] 0.5068 125 6 -12.10 -0.1187 MIMAT0003244 hsa-miR-579 3214 HOXB4 uuagcgccaaauAUGGUUUACUu || ||||||| cucgacacccgcUAACAAAUGAg 2 12 442 464 [hg19:17:46653620-46653642:-] 0.6677 147 7 -11.41 -0.1244 MIMAT0003263 hsa-miR-595 3214 HOXB4 ucuGUGUGGUGCCGUGUGAAg ::| |: | ||||||| aucUGCCCUCCCCCACACUUu 2 19 111 131 [hg19:17:46653953-46653973:-] 0.5293 146 7 -11.74 -0.3070 MIMAT0003288 hsa-miR-619 3214 HOXB4 ugACCCGUGUU----UGUACAGGUC-CAg ||||||| | :| |||||| || gcUGGGCACUACUCUGCCAGUCCAGAGUu 2 23 861 889 [hg19:17:46653195-46653223:-] 0.5380 125 0 -29.35 -0.1309 MIMAT0003295 hsa-miR-626 3214 HOXB4 uucuguaaaagUCUGUCGa ||||||| ccgcugcuggaAGACAGCc 2 9 497 515 [hg19:17:46653569-46653587:-] 0.5871 140 7 -11.75 -0.1790 MIMAT0003297 hsa-miR-628-3p 3214 HOXB4 agcUGACGGUGAGAAUGAUcu | | ::|:| |||||| gauAAUAUUAUUAUUACUAuu 3 19 1028 1048 [hg19:17:46653036-46653056:-] 0.5771 134 0 -6.04 -0.1696 MIMAT0003300 hsa-miR-631 3214 HOXB4 cgacuccagaccCGGUCCAGa |||||||| aucuuuaaucacGCCAGGUCc 2 10 361 381 [hg19:17:46653703-46653723:-] 0.7175 145 7 -15.65 -0.2930 MIMAT0003322 hsa-miR-652 3214 HOXB4 gugUUGGGAUCACCGC-GGUAa ::||: :|||||| |||| acgGGCCUCGGUGGCGACCAUu 2 19 418 439 [hg19:17:46653645-46653666:-] 0.7175 130 0 -28.38 -0.2185 MIMAT0003332 hsa-miR-656 3214 HOXB4 ucuccaACUGACAUAUUAUAa | |:|| ||||||| uuauuaUUAUUG-AUAAUAUu 2 16 1017 1036 [hg19:17:46653048-46653067:-] 0.5771 149 7 -7.31 -1.0539 MIMAT0003881 hsa-miR-668 3214 HOXB4 cauCACCCGGCUCGGCUCACUGu ||| ||:| | ||||||| ucuGUGUGCUGUACAGAGUGACa 2 21 1159 1181 [hg19:17:46652903-46652925:-] 0.6324 164 7 -23.47 -1.1406 MIMAT0003883 hsa-miR-767-3p 3214 HOXB4 ucuUUGGU-ACCCCAUACUCGUCu :|| | | || :||||||| cuuGACAACUCAGGAGUGAGCAGg 2 21 728 751 [hg19:17:46653333-46653356:-] 0.5325 151 7 -18.33 -0.1456 MIMAT0004906 hsa-miR-886-3p 3214 HOXB4 uucccagucauucGUGGGCGc ||||||| accauuaccucgaCACCCGCu 2 9 434 454 [hg19:17:46653630-46653650:-] 0.6677 140 7 -14.40 -0.4322 MIMAT0004912 hsa-miR-890 3214 HOXB4 guUGACUACGGAAAGGU-UCAu ||| |||| |||| ||| cuACU-CUGCCAGUCCAGAGUu 2 20 869 889 [hg19:17:46653195-46653215:-] 0.5380 121 0 -14.65 -0.1296 MIMAT0004921 hsa-miR-889 3214 HOXB4 uguuaccaacaggcUAUAAUu |||||| uauuauuauugauaAUAUUAu 2 8 1018 1038 [hg19:17:46653046-46653066:-] 0.5771 120 6 -3.00 -0.1793 MIMAT0004950 hsa-miR-877* 3214 HOXB4 gacccuccUCCCUCUUCUCCu | | |||||||| acgaauaaACGCAGAAGAGGg 2 14 136 156 [hg19:17:46653928-46653948:-] 0.4999 149 7 -15.96 -0.2684 MIMAT0004957 hsa-miR-760 3214 HOXB4 aggggugucuggGUCUCGGc ||||||| aggaggauguugCAGAGCCc 2 9 966 985 [hg19:17:46653099-46653118:-] 0.5681 140 7 -13.01 -0.1785 MIMAT0004979 hsa-miR-936 3214 HOXB4 gaCGCUAAGGAGGGAGA-UGACa |||| | |||||| |||| caGCGAAAGCACCCUCUGACUGc 2 21 551 573 [hg19:17:46653511-46653533:-] 0.6547 132 0 -23.23 -0.3778 MIMAT0005823 hsa-miR-1178 3214 HOXB4 gaucccuucUUGUCACUCGUu |: |||||||| ugacaacucAGGAGUGAGCAg 2 13 730 750 [hg19:17:46653334-46653354:-] 0.5325 148 7 -16.68 -0.3142 MIMAT0005827 hsa-miR-1182 3214 HOXB4 cagUGUAGGGAGGGUUC-UGGGAg |:| || | ||| ||||| ccgAUACCCAGCGAAAGCACCCUc 2 21 543 566 [hg19:17:46653518-46653541:-] 0.6489 120 0 -20.80 -0.5013 MIMAT0005829 hsa-miR-1184 3214 HOXB4 ccuucgguagUUCAGCGACGUCc |:| ||||||| gagaaauaggAGGAGGCUGCAGc 2 14 299 321 [hg19:17:46653763-46653785:-] 0.5542 145 7 -17.32 -0.2254 MIMAT0005572 hsa-miR-1225-5p 3214 HOXB4 ggGGGGUGACCCGGC-AUGGGUg ||||||| ||| |||||| ucCCCCACU--CCCGAUACCCAg 2 21 533 553 [hg19:17:46653531-46653551:-] 0.6489 133 6 -33.42 -0.2206 MIMAT0005592 hsa-miR-1237 3214 HOXB4 gacccccugccucgUCUUCCu |||||| aagaaaaagcaagaAGAAGGa 2 8 259 279 [hg19:17:46653805-46653825:-] 0.5068 120 6 -12.37 -0.1004 MIMAT0005863 hsa-miR-1200 3214 HOXB4 cuCCGAGUCUUACCGAGUCCUc ||| | :| ||||||| guGGC-CUUGACAACUCAGGAg 2 21 723 743 [hg19:17:46653341-46653361:-] 0.5108 142 7 -19.49 -0.1224 MIMAT0005867 hsa-miR-663b 3214 HOXB4 ggaguccgugccggCCCGGUGg ||||||| gaaaugacaauagaGGGCCACg 2 9 178 199 [hg19:17:46653885-46653906:-] 0.5560 140 7 -16.83 -0.2674 MIMAT0005894 hsa-miR-1243 3214 HOXB4 gugagGAUAUUAACUAGGU-CAa | | :|| |||||| || uuuggCGAAGAUGGAUCCACGUu 2 18 336 358 [hg19:17:46653726-46653748:-] 0.7175 121 0 -10.76 -0.6735 MIMAT0005900 hsa-miR-1248 3214 HOXB4 aaaucgugucacgaauaUGUUCUUCCa | ||||||| aagaaaaagaaaaagcaAGAAGAAGGa 2 11 253 279 [hg19:17:46653805-46653831:-] 0.5068 142 7 -12.00 -1.0067 MIMAT0005905 hsa-miR-1254 3214 HOXB4 ugacguccGAGGUCGAAGGUCCGa | |||| ||||||| uuuaaucaCGCCAG-GUCCAGGCc 2 17 364 386 [hg19:17:46653698-46653720:-] 0.7175 150 7 -21.83 -0.2218 MIMAT0005914 hsa-miR-1262 3214 HOXB4 uaggaagaUGUUUA--AGUGGGUa |::| | ||||||| gggccagaAUGACUGCUCACCCAc 2 15 644 667 [hg19:17:46653417-46653440:-] 0.5236 141 7 -14.33 -0.1317 MIMAT0005929 hsa-miR-1275 3214 HOXB4 cuGUCGGAGAGGGGGUg | ||| |||||||| auCUGCC-CUCCCCCAc 2 16 111 126 [hg19:17:46653958-46653973:-] 0.5293 153 7 -27.33 -0.2303 MIMAT0005929 hsa-miR-1275 3214 HOXB4 cugucGGAGAGGGGGUg ::| ||||||| cuuucUUUGUCCCCCAc 2 13 524 540 [hg19:17:46653544-46653560:-] 0.6431 144 7 -20.08 -0.3830 MIMAT0005949 hsa-miR-664 3214 HOXB4 acAUCCGACCCCUAUUUACUUAu ||| || || |||||||| ccUAGACU---GA-AAAUGAAUg 2 22 909 927 [hg19:17:46653157-46653175:-] 0.5380 151 7 -10.99 -0.6637 MIMAT0005788 hsa-miR-513b 3214 HOXB4 uaUUUAC-UGUGGAGGAACACUu ||||| :: :|:||||||| auAAAUGUUUGGUUUCUUGUGAc 2 21 1188 1210 [hg19:17:46652874-46652896:-] 0.6501 159 7 -17.95 -0.7513 MIMAT0006767 hsa-miR-1827 3214 HOXB4 uaagUUAGAU-GAC-GGAGu |||||| ||| |||| gaaaAAUCUAUCUGCCCUCc 2 15 102 121 [hg19:17:46653963-46653982:-] 0.5367 125 0 -14.96 -0.1243 MIMAT0009454 hsa-miR-1979 3214 HOXB4 aucagUUCACUUCG-UCA-CCCUc :|| |:||| ||| |||| cagagGAGGGGAGCAAGUAGGGAa 2 18 695 718 [hg19:17:46653366-46653389:-] 0.4892 124 0 -18.97 -0.1150 MIMAT0009979 hsa-miR-2054 3214 HOXB4 uuAUUUAAUUUAAAUAUAAUGuc | :|| | ||| |||||| uaUUGAUAAUAUUAUUAUUACua 3 22 1024 1046 [hg19:17:46653038-46653060:-] 0.5771 141 0 -3.56 -0.2980 MIMAT0013802 hsa-miR-2861 3214 HOXB4 ggcGGGUGGCGGUCCGGGg :||| |||||||| cauUCCAAAACCAGGCCCc 2 17 1090 1108 [hg19:17:46652976-46652994:-] 0.6260 152 7 -27.85 -0.5517 MIMAT0013802 hsa-miR-2861 3214 HOXB4 ggcgGGUGGCGGUCCGGGg ||| |||||||| cacgCCAGGUCCAGGCCCa 2 16 370 388 [hg19:17:46653696-46653714:-] 0.7175 151 7 -28.21 -0.7437 MIMAT0014978 hsa-miR-3116 3214 HOXB4 ucAGGGAUGAUACAAGGUCCGu || | :| | | ||||||| aaUCAC-GCCA-GGUCCAGGCc 2 21 367 386 [hg19:17:46653698-46653717:-] 0.7175 144 7 -14.52 -0.2279 MIMAT0014983 hsa-miR-3121 3214 HOXB4 acaggaaacggaugaGAUAAAu |||||| auaauauuauuauuaCUAUUUu 2 8 1029 1050 [hg19:17:46653034-46653055:-] 0.5771 120 6 -7.09 -0.1984 MIMAT0014988 hsa-miR-3125 3214 HOXB4 agAGAGGUGUCGAAGGAGAu ||| : : |:||||||| caUCUGUCUUGUUUCCUCUg 2 19 387 406 [hg19:17:46653678-46653697:-] 0.7175 154 7 -21.48 -0.2395 MIMAT0014989 hsa-miR-3126-5p 3214 HOXB4 acGAAGACCGUAGA--CAGG-GAGu :|| || ||| | |||| ||| uuUUUGUGUCAUGUGAGUCCUCUCu 2 21 1049 1073 [hg19:17:46653011-46653035:-] 0.5771 123 0 -16.74 -0.4716 MIMAT0015377 hsa-miR-3126-3p 3214 HOXB4 agacACACUGCCUACGGUCUAc | |||| |||||||| acccUCUGAC---UGCCAGAUa 2 19 561 579 [hg19:17:46653505-46653523:-] 0.6547 150 7 -14.39 -0.8318 MIMAT0015037 hsa-miR-3163 3214 HOXB4 cagAAUGACGGGAGUAA-AAUAu ||:| | :|:||| |||| augUUGCAUCGUUUAUUAUUAUu 2 20 1002 1024 [hg19:17:46653060-46653082:-] 0.5771 123 0 -9.54 -1.1790 MIMAT0015037 hsa-miR-3163 3214 HOXB4 cagAAUGACGGGAGUAA-AAUAu |||:|| : :||| |||| uuaUUAUUGAUAAUAUUAUUAUu 2 20 1020 1042 [hg19:17:46653042-46653064:-] 0.5771 123 0 -6.58 -1.0831 MIMAT0015056 hsa-miR-3179 3214 HOXB4 ugcaaaUUUAAAGUGGGGAAGa ||| :||||||| auuccaAAACCAGGCCCCUUCc 2 17 1091 1112 [hg19:17:46652972-46652993:-] 0.6155 144 7 -13.98 -0.1937 MIMAT0015064 hsa-miR-3184 3214 HOXB4 uuuucgagccagacucCGGGGAGu ||||||| cuaggaaauaaaauguGCCCCUCc 2 9 933 956 [hg19:17:46653128-46653151:-] 0.5485 140 7 -15.98 -0.3853 MIMAT0015067 hsa-miR-3186-5p 3214 HOXB4 uuCGGUG-C-AUCUGUCUG-CGGAc |||:| | |:|| |||| |||| cuGCCGCUGCUGGA-AGACAGCCUg 2 21 494 517 [hg19:17:46653567-46653590:-] 0.5871 124 0 -26.66 -0.2458 MIMAT0015070 hsa-miR-3188 3214 HOXB4 ggGGCAUAGGCGUGUUUCGGAGa ::||| | ||| :||||||| agUUGUA-CAGCA-GAAGCCUCu 2 22 886 906 [hg19:17:46653178-46653198:-] 0.5380 157 7 -21.54 -0.2291 MIMAT0015076 hsa-miR-3192 3214 HOXB4 aaggUGACGAUGUUGGAGGGUCu | || |:| |||||||| auaaAAUG-UGC-CCCUCCCAGu 2 20 940 960 [hg19:17:46653124-46653144:-] 0.5590 147 7 -19.23 -0.1322 MIMAT0015089 hsa-miR-3202 3214 HOXB4 uaaUUUCGAGAAGAGGGAAGGu ||| | | ||||||| uccAAAAC-CAGGCCCCUUCCu 2 20 1093 1113 [hg19:17:46652971-46652991:-] 0.6155 141 7 -13.72 -0.2093 MIMAT0016858 hsa-miR-4306 3214 HOXB4 augaCGGAAAGAGAGGu ||| ||||||| agaaGCC--UCUCUCCu 2 14 897 911 [hg19:17:46653173-46653187:-] 0.5380 142 7 -15.93 -0.1186 MIMAT0016858 hsa-miR-4306 3214 HOXB4 augacggaaAGAGAGGu ||||||| ugugaguccUCUCUCCu 2 9 1060 1076 [hg19:17:46653008-46653024:-] 0.5771 140 7 -13.80 -0.5705 MIMAT0016863 hsa-miR-4311 3214 HOXB4 guGUGA-GUCGAGAGAAAg | || | :||||||| cuCUCUCCUUUUCUCUUUc 2 17 1068 1086 [hg19:17:46652998-46653016:-] 0.5771 143 7 -15.26 -0.6078 MIMAT0016878 hsa-miR-4257 3214 HOXB4 gagucAGGGGUGGAGACc |:||:||||||| gccccUUCCUACCUCUGg 2 14 1104 1121 [hg19:17:46652963-46652980:-] 0.6155 157 7 -25.96 -0.1480 MIMAT0016890 hsa-miR-4261 3214 HOXB4 acccaGGGACAAAGGa :|:||||||| aucugUCUUGUUUCCu 2 12 388 403 [hg19:17:46653681-46653696:-] 0.7175 147 7 -15.86 -0.3538 MIMAT0016894 hsa-miR-4262 3214 HOXB4 guccaucagACUUACAg ||||||| gacugaaaaUGAAUGUg 2 9 913 929 [hg19:17:46653155-46653171:-] 0.5380 140 7 -6.61 -0.9071 MIMAT0016906 hsa-miR-4274 3214 HOXB4 guccccCUCCCUGACGAc || ||||||| gggccaGAAUGACUGCUc 2 13 644 661 [hg19:17:46653423-46653440:-] 0.5236 144 7 -15.70 -0.1927 MIMAT0016909 hsa-miR-4279 3214 HOXB4 cuuCGGCCCUCCUCUc ||| ||||||| ucuGCC--GAGGAGAa 2 14 403 416 [hg19:17:46653668-46653681:-] 0.7175 142 7 -14.66 -0.1946 MIMAT0000078 hsa-miR-23a 3214 HOXB4 ccuuuagggaccgUUACACUa ||||||| uagacugaaaaugAAUGUGAa 2 9 911 931 [hg19:17:46653153-46653173:-] 0.5380 140 7 -8.56 -0.8648 MIMAT0000256 hsa-miR-181a 3214 HOXB4 ugAGUGGCUGUC-GCAACUUACAa || : ||| | ||||||| ucUCCUAGACUGAAAAUGAAUGUg 2 22 906 929 [hg19:17:46653155-46653178:-] 0.5380 144 7 -16.01 -0.8971 MIMAT0000257 hsa-miR-181b 3214 HOXB4 ugGGUGGCUGUC-GUUACUUACAa :| : ||| | ||||||||| ucUCCUAGACUGAAAAUGAAUGUg 2 22 906 929 [hg19:17:46653155-46653178:-] 0.5380 156 7 -17.98 -0.8971 MIMAT0000258 hsa-miR-181c 3214 HOXB4 ugagUGGCUGUCCAACUUACAa ||:|| | ||||||| cuagACUGAAA--AUGAAUGUg 2 19 910 929 [hg19:17:46653155-46653174:-] 0.5380 147 7 -12.22 -0.9004 MIMAT0000416 hsa-miR-1 3214 HOXB4 uauguauGAAGAAAUGUAAGGu |||: | ||||||| cuuuucuCUUUCUGACAUUCCa 2 16 1075 1096 [hg19:17:46652988-46653009:-] 0.6016 155 7 -14.81 -0.7708 MIMAT0000418 hsa-miR-23b 3214 HOXB4 ccauuagggaccgUUACACUa ||||||| uagacugaaaaugAAUGUGAa 2 9 911 931 [hg19:17:46653153-46653173:-] 0.5380 140 7 -8.56 -0.8648 MIMAT0000432 hsa-miR-141 3214 HOXB4 gguagaaAUGGUCU-----GUCACAAu |:||||| ||||||| cucugacUGCCAGAUAGUGCAGUGUUu 2 16 564 590 [hg19:17:46653494-46653520:-] 0.6547 146 7 -20.53 -0.6067 MIMAT0000448 hsa-miR-136 3214 HOXB4 agguaGUAGUUUUGUUUA-CCUCa || ||:| |||| |||| aaagaCAGAAAGAGAAAUAGGAGg 2 19 288 311 [hg19:17:46653773-46653796:-] 0.5542 126 0 -13.92 -0.4021 MIMAT0000455 hsa-miR-185 3214 HOXB4 agUCCUUGACGGAAAGAGAGGu || |: ||| ||||||| acAGCAGAAGCC--UCUCUCCu 2 21 892 911 [hg19:17:46653173-46653192:-] 0.5380 149 7 -20.94 -0.1175 MIMAT0000455 hsa-miR-185 3214 HOXB4 aguccuugacggaaAGAGAGGu ||||||| ugucaugugaguccUCUCUCCu 2 9 1055 1076 [hg19:17:46653008-46653029:-] 0.5771 140 7 -16.15 -0.5705 MIMAT0000462 hsa-miR-206 3214 HOXB4 gguguGUGAAGGAAUGUAAGGu | |||:|| ||||||| cuuuuCUCUUUCUGACAUUCCa 2 18 1075 1096 [hg19:17:46652988-46653009:-] 0.6016 165 7 -19.68 -0.7672 MIMAT0000510 hsa-miR-320a 3214 HOXB4 agCGGGAGAGU-UGGGUCGAAAa ||:| |||: ::||||||| caGCUC-CUCGUUUUCAGCUUUg 2 21 318 339 [hg19:17:46653745-46653766:-] 0.6595 153 7 -22.48 -0.4689 MIMAT0000682 hsa-miR-200a 3214 HOXB4 uguagcaAUGGUCU-----GUCACAAu |:||||| ||||||| cucugacUGCCAGAUAGUGCAGUGUUu 2 16 564 590 [hg19:17:46653494-46653520:-] 0.6547 146 7 -18.70 -0.6030 MIMAT0000727 hsa-miR-374a 3214 HOXB4 gugAAUAGU--CCAACAUAAUAuu ||||:| | | |||||| uuaUUAUUAUUGAUAAUAUUAUua 3 20 1017 1040 [hg19:17:46653044-46653067:-] 0.5771 134 0 -3.49 -0.3001 MIMAT0000727 hsa-miR-374a 3214 HOXB4 guGAAUAGUCCAAC-------AUAAUAuu :||||:| |||| |||||| agUUUAUUAUGUUGCAUCGUUUAUUAUua 3 21 994 1022 [hg19:17:46653062-46653090:-] 0.5771 131 0 -8.83 -0.2187 MIMAT0000730 hsa-miR-377 3214 HOXB4 ugUUUUCAACGGAAACACACUa :|| | | | ||||||| uaGAACCCUUCGUAUGUGUGAa 2 21 1135 1156 [hg19:17:46652928-46652949:-] 0.6146 148 7 -12.35 -1.1021 MIMAT0004692 hsa-miR-340 3214 HOXB4 uuagucagaguaacGAAAUAUu ||||||| ugcccucccccacaCUUUAUAu 2 9 114 135 [hg19:17:46653949-46653970:-] 0.5293 140 7 -5.58 -0.3703 MIMAT0000752 hsa-miR-328 3214 HOXB4 ugCCUUCCCG-UCUCUCCCGGUc | || | | | ||||||||| uaGAAAUGACAAUAGAGGGCCAc 2 21 176 198 [hg19:17:46653886-46653908:-] 0.5560 159 7 -19.14 -0.1396 MIMAT0001075 hsa-miR-384 3214 HOXB4 auACUUGU-UAAAGAUCCUUa ||||:: : ||||||| aaUGAAUGUGAAACUAGGAAa 2 19 920 940 [hg19:17:46653144-46653164:-] 0.5485 145 7 -13.25 -1.1733 MIMAT0003393 hsa-miR-425 3214 HOXB4 aguugcccucacuAGCACAGUAa |:||||||| uauuacuauuuuuUUGUGUCAUg 2 11 1039 1061 [hg19:17:46653023-46653045:-] 0.5771 146 7 -10.38 -1.0151 MIMAT0002816 hsa-miR-494 3214 HOXB4 cuccaaagggcacaUACAAAgu |||||| gacaauagaaauaaAUGUUUgg 3 9 1178 1199 [hg19:17:46652885-46652906:-] 0.6501 120 0 -4.22 -0.1148 MIMAT0002817 hsa-miR-495 3214 HOXB4 uucUUCACGUGGUACA-AACAAa |:| ||:| ||| ||||| uccAGGCCCAUC-UGUCUUGUUu 2 20 379 400 [hg19:17:46653684-46653705:-] 0.7175 121 0 -11.57 -0.1438 MIMAT0002821 hsa-miR-181d 3214 HOXB4 ugGGUGGCUG-UUGUUACUUACAa :| : ||| :| ||||||||| ucUCCUAGACUGAAAAUGAAUGUg 2 22 906 929 [hg19:17:46653155-46653178:-] 0.5380 160 7 -17.98 -0.8971 MIMAT0003281 hsa-miR-613 3214 HOXB4 ccguuucuuccUUGUAAGGa :||||||| uuucucuuucuGACAUUCCa 2 10 1077 1096 [hg19:17:46652988-46653007:-] 0.6016 141 7 -8.67 -0.7927 MIMAT0005792 hsa-miR-320b 3214 HOXB4 aaCGGGAGAGU-UGGGUCGAAAa ||:| |||: ::||||||| caGCUC-CUCGUUUUCAGCUUUg 2 21 318 339 [hg19:17:46653745-46653766:-] 0.6595 153 7 -22.85 -0.4689 MIMAT0005793 hsa-miR-320c 3214 HOXB4 ugGGAGAGU-UGGGUCGAAAa |: |||: ::||||||| agCUCCUCGUUUUCAGCUUUg 2 19 319 339 [hg19:17:46653745-46653765:-] 0.6595 149 7 -20.37 -0.4689 MIMAT0004903 hsa-miR-300 3214 HOXB4 ucucuCUCAGA-C--GGGAA-CAUAu |||||| | ||||| |||| ugcuuGAGUCUAGAACCCUUCGUAUg 2 18 1125 1150 [hg19:17:46652934-46652959:-] 0.6098 127 0 -19.94 -0.2982 MIMAT0004954 hsa-miR-543 3214 HOXB4 uucuucacguggcGCUUACAaa :|||||| ccuagacugaaaaUGAAUGUga 3 10 909 930 [hg19:17:46653154-46653175:-] 0.5380 121 0 -9.36 -0.1054 MIMAT0004955 hsa-miR-374b 3214 HOXB4 gugaAUCGU-CCAACAUAAUAua | ||| ||| |||||| uaugUUGCAUCGUU-UAUUAUua 3 19 1001 1022 [hg19:17:46653062-46653083:-] 0.5771 131 0 -5.52 -0.2018 MIMAT0004955 hsa-miR-374b 3214 HOXB4 gugAAUCGU--CCAACAUAAUAua ||| :| | | |||||| uuaUUAUUAUUGAUAAUAUUAUua 3 20 1017 1040 [hg19:17:46653044-46653067:-] 0.5771 126 0 -1.71 -0.3052 MIMAT0006764 hsa-miR-320d 3214 HOXB4 agGA-GAGU-UGGGUCGAAAa || |||: ::||||||| agCUCCUCGUUUUCAGCUUUg 2 18 319 339 [hg19:17:46653745-46653765:-] 0.6595 147 7 -18.54 -0.4689

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G002521 MO000029153 HOXB4 Homo sapiens 3214 11085749 0 0 R63822; HS$HOXB4_14; Binding factors: JARID2 // 0 0 R63818; HS$HOXB4_13; Binding factors: JARID2 // 0 0 R63817; HS$HOXB4_12; Binding factors: JARID2 // 0 0 R63816; HS$HOXB4_11; Binding factors: JARID2 // 0 0 R63739; HS$HOXB4_10; Binding factors: YY1 // 0 0 R63737; HS$HOXB4_09; Binding factors: YY1 // 0 0 R63736; HS$HOXB4_08; Binding factors: YY1 // 0 0 R63735; HS$HOXB4_07; Binding factors: YY1 // 0 0 R39685; HS$HOXB4_03; Binding factors: usf1:USF2 , USF2:USF1:NF-Y // 0 0 R39682; HS$HOXB4_02; Binding factors: NF-Y , USF2:USF1:NF-Y //909 931 R57647; HS$HOXB4_06; Binding factors: hsa-miR-23a-3p

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End HOXB4; HOX2F 1 979 100 214.234 - chr17 46653104 46654083 HOXB4; HOX2F 980 1186 98.608 214.234 - chr17 46652897 46653104 HOXB4; HOX2F 1187 1209 97.563 214.234 - chr17 46652874 46652897 HOXB4; HOX2F 1210 1212 78.688 214.234 - chr17 46652871 46652874 HOXB4; HOX2F 1213 1214 43.875 214.234 - chr17 46652869 46652871 HOXB4; HOX2F 1215 1215 0.01 214.234 - chr17 46652868 46652869

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile HOXB4 hsv2-miR-H6star beg:336 end:350 pic:3' TCCTACCTTCCCGTCTTCTACCC 5'& ||| |||||||| &5' ----------GGC-GAAGATGG- 3' HOXB4 hsa-miR-1 beg:1080 end:1097 pic:3' TATGTATGAAGAAATGTAAGGT 5'& .|||| |||||||| &5' -------TTTCTG-ACATTCCA 3' HOXB4 hsa-miR-1471 beg:0 end:17 pic:3' TGTGGACCGAGGTGTGCGCCCG 5'& .|| | ||.|||||||| &5' --GCC---C-CCGCACGCGGG- 3' HOXB4 hsa-miR-30estar beg:905 end:921 pic:3' CGACATTTGTAGG--CTGACTTTC 5'& ||| |||||||| &5' ----------TCCTAGACTGAAA- 3' HOXB4 hsa-miR-30dstar beg:910 end:921 pic:3' CGTCGTTTGTAGACTGACTTTC 5'& |||||||| &5' -------------GACTGAAA- 3' HOXB4 hsa-miR-626 beg:505 end:515 pic:3' TTCTGTAAAAGTCTGTCGA 5'& ||||||| &5' -----------AGACAGC- 3' HOXB4 hsa-miR-627 beg:771 end:783 pic:3' AGGAGAAAAGAATCTCTGAGTG 5'& ||||||||| &5' ------------AGAGACTCA- 3' HOXB4 hsa-miR-28-5p beg:309 end:326 pic:3' GAGTTATCTGACACTCGAGGAA 5'& ||.||| ||||||| &5' ------AGGCTGC-AGCTCCT- 3' HOXB4 hsa-miR-483-3p beg:728 end:747 pic:3' TTCTGCCCTCCTCTCCTCACT 5'& ||| |||||||| &5' --GACAACTC---AGGAGTGA 3' HOXB4 hsa-miR-328 beg:186 end:198 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||||||||| &5' ------------AGAGGGCCA- 3' HOXB4 hsa-miR-328 beg:635 end:651 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& || ||||||||| &5' ---------CACTGAGGGCCAG 3' HOXB4 hsa-miR-4313 beg:65 end:84 pic:3' CCCAAACCCC-GG--TCCCCCGA 5'& |||| | ||||||| &5' ------GGGGACAGGAGGGGGC- 3' HOXB4 hsa-miR-595 beg:112 end:132 pic:3' TCTGTGTGGTGCC-GTGTGAAG 5'& .| || | |||||||. &5' ----GC-CCTCCCCCACACTTT 3' HOXB4 hsa-miR-886-3p beg:442 end:454 pic:3' TTCCCAGTCATTC-GTGGGCGC 5'& | ||||||| &5' ------------GACACCCGC- 3' HOXB4 hsa-miR-2861 beg:1090 end:1109 pic:3' GGCGGGTGGCGGTCCGGGG 5'& .||| ||||||||| &5' ---TCCAAAACCAGGCCCC 3' HOXB4 hsa-miR-2861 beg:369 end:388 pic:3' GGCGGGTGGCGGTCCGGGG 5'& |||| |||||||| &5' -CGCCAGGT-CCAGGCCC- 3' HOXB4 hsa-miR-492 beg:366 end:382 pic:3' TTCTTAGAACAGGGC-GTCCAGGA 5'& || || ||||||| &5' ----------TCACGCCAGGTCC- 3' HOXB4 hsa-miR-631 beg:370 end:381 pic:3' CGACTCCAGACCCGGTCCAGA 5'& |||||||| &5' ------------GCCAGGTC- 3' HOXB4 hsa-miR-3179 beg:1101 end:1112 pic:3' TGCAAATTTAAAGTGGGGAAGA 5'& .||||||| &5' -------------GCCCCTTC- 3' HOXB4 hsa-miR-149star beg:109 end:123 pic:3' CGTGTCGGGGGCAGGGAGGGA 5'& .|.| ||||||| &5' --------TCTG-CCCTCCC- 3' HOXB4 hsa-let-7e beg:1101 end:1119 pic:3' TTGATATGTTGGAGGATGGAGT 5'& .| |.||||||||| &5' ------GCCCCTTCCTACCTC- 3' HOXB4 hsa-miR-98 beg:1101 end:1119 pic:3' TTGTTATGTTGAATGATGGAGT 5'& .| ||| ||||||| &5' ------GCCCCTTCCTACCTC- 3' HOXB4 hsa-let-7d beg:1101 end:1120 pic:3' TTGATACGTTGGAT-GATGGAGA 5'& || ||| |||||||| &5' ------GCC-CCTTCCTACCTCT 3' HOXB4 hsa-let-7a beg:1104 end:1119 pic:3' TTGATATGTTGGAT-GATGGAGT 5'& ||| ||||||| &5' ----------CCTTCCTACCTC- 3' HOXB4 hsa-miR-151-5p beg:309 end:327 pic:3' TGATCTGACACTCGAGGAGCT 5'& ||.||| ||||||||| &5' ---AGGCTGC-AGCTCCTCG- 3' HOXB4 hsa-let-7a-2star beg:1157 end:1175 pic:3' CCTTTCGATCCTCCGACATGTC 5'& ||. | ||||||||| &5' ------CTGTGT-GCTGTACAG 3' HOXB4 hsa-let-7gstar beg:1159 end:1175 pic:3' CGTTCCGTCACCGGACATGTC 5'& ||| |||||||| &5' --------GTGTGCTGTACAG 3' HOXB4 ebv-miR-BART10star beg:20 end:37 pic:3' ACATGTCTTGGTTTCTCCACCG 5'& ||||| |.||||| &5' ------GAACCTC-GGGGTGG- 3' HOXB4 ebv-miR-BART10star beg:708 end:728 pic:3' ACATGTCTTGGTTTCTCCACCG 5'& ||| .||| .|.|||||| &5' -GTAGGGAA----GGGGGTGGC 3' HOXB4 ebv-miR-BART16 beg:93 end:116 pic:3' TCTCGTGTGTGGGTG-----AGATAGATT 5'& |.|| |||. |||||||. &5' -GGGC-----CCCGGAAAAATCTATCTG- 3' HOXB4 ebv-miR-BART2-5p beg:924 end:943 pic:3' CGTTCCCGCTTACGTCTTTTAT 5'& |.||| .||.||||| &5' ------GTGAAACTAGGAAATA 3' HOXB4 ebv-miR-BART7star beg:366 end:385 pic:3' ACAAAGTATCAGTTCCAGGTCC 5'& ||| | ||||||||| &5' ----TCACG--CCAGGTCCAGG 3' HOXB4 hsa-miR-130bstar beg:288 end:302 pic:3' CATCACGTTGTCCCTTTCTCA 5'& .||| ||||||| &5' -------GACA--GAAAGAG- 3' HOXB4 hsa-miR-4267 beg:856 end:867 pic:3' CACGGTGGCTCGACCT 5'& |||||||. &5' --------GAGCTGGG 3' HOXB4 hsa-miR-558 beg:307 end:324 pic:3' TAAAACCA-TGTCGTCGAGT 5'& || .| ||||||| &5' -----GGAGGCTGCAGCTC- 3' HOXB4 hsa-miR-3126-3p beg:564 end:579 pic:3' AGACACACTGCCTACGGTCTAC 5'& |||| |||||||| &5' ------TGAC---TGCCAGAT- 3' HOXB4 hsa-miR-423-5p beg:943 end:954 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& | |||||||| &5' ------------TGTGCCCCTC- 3' HOXB4 kshv-miR-K12-6-5p beg:496 end:507 pic:3' GGCTACCTAATCCACGACGACC 5'& |||||||| &5' --------------GCTGCTGG 3' HOXB4 hsa-miR-4290 beg:780 end:798 pic:3' CTCCCTTCTT--TCCTCCCGT 5'& .||| .||||||| &5' -----GAGACCCGGGAGGGC- 3' HOXB4 hsa-miR-193a-3p beg:831 end:850 pic:3' TGACCCTGAAACATCCGGTCAA 5'& ||| .|||||||| &5' ---GGGTGAG---GGGCCAGTT 3' HOXB4 hsa-miR-1178 beg:736 end:750 pic:3' GATCCCTTCTTGTCACTCGTT 5'& |. ||||||||. &5' ---------AGGAGTGAGCAG 3' HOXB4 hsa-miR-425 beg:1049 end:1061 pic:3' AGTTGCCCTCACTAGCACAGTAA 5'& |.||||||| &5' -------------TTGTGTCAT- 3' HOXB4 hcmv-miR-UL148D beg:955 end:975 pic:3' GCCACTTCT--TCC-CCTCCTGCT 5'& || .|| ||||||.| &5' ------AGTCTGGGAGGAGGATG- 3' HOXB4 hsa-let-7a-2star beg:873 end:896 pic:3' CCTTTCGATCC--TC-CGACATGTC 5'& || || || |.||||||| &5' -----GCCAGTCCAGAGTTGTACAG 3' HOXB4 hsa-let-7astar beg:285 end:308 pic:3' CTTTCTGTCA-TCTAACATATC 5'& |||||||| ||| |||| &5' -AAAGACAGAAAGAGAA-ATAG 3' HOXB4 hsa-let-7b beg:1097 end:1119 pic:3' TTGGTGTGTTGGAT-GATGGAGT 5'& ||||| .| ||| ||||||| &5' AACCAGGCC-CCTTCCTACCTC- 3' HOXB4 hsa-let-7c beg:1097 end:1119 pic:3' TTGGTATGTTGGAT-GATGGAGT 5'& ||||| .| ||| ||||||| &5' AACCAGGCC-CCTTCCTACCTC- 3' HOXB4 hsa-let-7g beg:1098 end:1119 pic:3' TTGACATGTTTGAT----GATGGAGT 5'& ||..| ||||||| &5' -------CAGGCCCCTTCCTACCTC- 3' HOXB4 hsa-let-7gstar beg:712 end:735 pic:3' CGTTCCGTCACCGGACATGTC 5'& | |||| .||||||| ||| &5' GGAAGGGGGTGGCCTTGACA- 3' HOXB4 hsa-let-7i beg:1098 end:1119 pic:3' TTGTCGTGTTTGAT-GATGGAGT 5'& ||| .| || ||||||| &5' --CAG-GCCC-CTTCCTACCTC- 3' HOXB4 hsa-miR-101 beg:1154 end:1172 pic:3' AAGTCAATAGTGTCATGACAT 5'& |||| ||.||||| &5' ------TATCTGTGTGCTGTA 3' HOXB4 hsa-miR-106astar beg:991 end:1010 pic:3' CATTCTTCACG-AATGTAACGTC 5'& ||| |||..||||| &5' ------AGTTTATTATGTTGCA- 3' HOXB4 hsa-miR-106b beg:108 end:133 pic:3' TAGACGTGACA--GTCGTGAAAT 5'& |||||| || || ||||||| &5' ATCTGCCCTCCCCCA-CACTTTA 3' HOXB4 hsa-miR-1178 beg:709 end:728 pic:3' GATCCCTTCTTGTCACTCGTT 5'& ||||||||.. .||| || &5' -TAGGGAAGGG-GGTG-GC-- 3' HOXB4 hsa-miR-1180 beg:87 end:106 pic:3' TGTGTGGGTGCGCTCGGCCTTT 5'& .||.. || ||||||| &5' ----GCCTGGGCC--CCGGAAA 3' HOXB4 hsa-miR-1200 beg:722 end:744 pic:3' CTCCGAGTCTTACCGAGTCCTC 5'& ||| || |||||||| &5' --GGCCTTGACAA-CTCAGGAG 3' HOXB4 hsa-miR-1203 beg:843 end:867 pic:3' CTCGACGTAGGACCGA-GGCCC 5'& ||.|| .|.|||| |.||| &5' -AGTTGAGTTCTGGGAGCTGGG 3' HOXB4 hsa-miR-1204 beg:180 end:199 pic:3' TATTACCTCTGG-----TCCGGTGCT 5'& ||| .||||||| &5' --------GACAATAGAGGGCCACG- 3' HOXB4 hsa-miR-1207-3p beg:831 end:852 pic:3' CTTTACT-CCCGGTCGACT 5'& ...||| |||||||.||| &5' -GGGTGAGGGGCCAGTTGA 3' HOXB4 hsa-miR-1207-3p beg:149 end:169 pic:3' CTTTA-CTCCCGGTCGACT 5'& ||.. ||||| |||| &5' GAGGGGGAGGGGAAGCT-- 3' HOXB4 hsa-miR-1207-3p beg:455 end:473 pic:3' CTTTACTCCCGGTCGACT 5'& |||||||| ||.||| &5' -AAATGAGGCCCGGCT-- 3' HOXB4 hsa-miR-1208 beg:30 end:50 pic:3' AGGCGGACAGACTTGTCACT 5'& |. | ||..|||||| &5' ---GTGGGGGTGGGCAGTGA 3' HOXB4 hsa-miR-122 beg:598 end:617 pic:3' GTTTGTG-GTAACAGTGTGAGGT 5'& ||||| || |||||||. &5' --AACACACA----CACACTCT- 3' HOXB4 hsa-miR-1224-3p beg:48 end:72 pic:3' GAC-TCCTCT-CTCCTCCACCCC 5'& || |||.|| |.|| || |||| &5' -TGCAGGGGATGGGGTGG-GGGG 3' HOXB4 hsa-miR-1224-3p beg:57 end:82 pic:3' GACTCCTCTCTCCTCCACCCC 5'& ||.||.|| |||||| ||| &5' -TGGGGGGACAGGAGG-GGG- 3' HOXB4 hsa-miR-1225-5p beg:531 end:553 pic:3' GGGGGGTGACCCGGC-ATGGGTG 5'& |||||||| ||| |||||| &5' -CCCCCACTC--CCGATACCCA- 3' HOXB4 hsa-miR-1229 beg:827 end:843 pic:3' GACACCCTCCCGTCACCACTCTC 5'& ||||| ||||||.| &5' ---------GGCAG-GGTGAGGG 3' HOXB4 hsa-miR-1236 beg:143 end:164 pic:3' GACCTC-TCTGTTCCCCTTCTCC 5'& | ||| .|||||.||.|| &5' -----GCAGAAGAGGGGGAGGGG 3' HOXB4 hsa-miR-1236 beg:295 end:315 pic:3' GACCTCTCTGTTCCCCTTCTCC 5'& ||||| |||.|||| &5' ----AGAGAAATA-GGAGGAGG 3' HOXB4 hsa-miR-1236 beg:960 end:972 pic:3' GACCTCTCTGTTCCCCTTCTCC 5'& ||||.|||| &5' -------------GGGAGGAGG 3' HOXB4 hsa-miR-1236 beg:699 end:723 pic:3' GACCTCTCTGTTC--CCCTTCTCC 5'& ||.||| |||| ||||||.|| &5' --GGGGAG-CAAGTAGGGAAGGGG 3' HOXB4 hsa-miR-1237 beg:258 end:280 pic:3' GACCCCCTGCCTCG----TCTTCCT 5'& || ||| ||||||| &5' ------GAAAAAGCAAGAAGAAGGA 3' HOXB4 hsa-miR-1237 beg:57 end:80 pic:3' GACCCC-CTGCCTCGTCTTCCT 5'& ||||| |. || |||.|||. &5' -TGGGGTGGGGGGACAGGAGGG 3' HOXB4 hsa-miR-1246 beg:93 end:113 pic:3' GGACGAGG--TTTTTAGGTAA 5'& || || |||||||.|| &5' ---GCCCCGGAAAAATCTAT- 3' HOXB4 hsa-miR-1249 beg:146 end:168 pic:3' ACTTCTTCCCC-CCCTTCCCGCA 5'& |||||.|||| |||.| || &5' -GAAGAGGGGGAGGGGAA-GC-- 3' HOXB4 hsa-miR-1252 beg:513 end:528 pic:3' ATTTACTTAAGTTAAAGGAAGA 5'& | .||||||||. &5' ---------TGGATTTCCTTT- 3' HOXB4 hsa-miR-1255a beg:607 end:627 pic:3' TTAGATGAAAGAAACGAGTAGGA 5'& || ||| ||||||.| &5' -----ACACTCTCC-CTCATCTT 3' HOXB4 hsa-miR-1255b beg:608 end:626 pic:3' TTGGTGAAAGAAACGAGTAGGC 5'& |||| || ||||||. &5' ---CACTCTCC---CTCATCT- 3' HOXB4 hsa-miR-125b-2star beg:1191 end:1210 pic:3' CAGGGTTCTCGGACT---GAACACT 5'& |..||. ||||||| &5' ---------GTTTGGTTTCTTGTGA 3' HOXB4 hsa-miR-1260 beg:52 end:70 pic:3' ACCACCGTCTCCACCCTA 5'& || || |.||||||. &5' -GG-GGATGGGGTGGGG- 3' HOXB4 hsa-miR-1262 beg:653 end:667 pic:3' TAGGAAGATGTTTAAGTGGGTA 5'& ||.| ||||||| &5' ------CTGC----TCACCCA- 3' HOXB4 hsa-miR-1268 beg:113 end:131 pic:3' GGGGGTGGTGGTGCGGGC 5'& |||.| || |||| |.. &5' CCCTC-CC-CCACACTT- 3' HOXB4 hsa-miR-1269 beg:743 end:765 pic:3' GGTCATCGTGCC----GAGTCAGGTC 5'& |||| || .| |||||| &5' -----AGCA-GGAAAATTGAGTCCA- 3' HOXB4 hsa-miR-1269 beg:862 end:886 pic:3' GGTCATCGTGC-----CGAGTCAGGTC 5'& .|||| || |||||||| &5' -----GGCACTACTCTGC-CAGTCCAG 3' HOXB4 hsa-miR-1274a beg:37 end:59 pic:3' ACCGCGG-ACT--TGTCCCTG 5'& ||| || ||| .|||||. &5' TGG-GCAGTGAGTGCAGGGG- 3' HOXB4 hsa-miR-1274a beg:701 end:718 pic:3' ACCGCGGACTTGTCCCTG 5'& || || .||||| &5' -GGAGCAAG--TAGGGA- 3' HOXB4 hsa-miR-1275 beg:112 end:127 pic:3' CTGTCGGAGAGGGGGTG 5'& ||| ||||||||| &5' ----GCC-CTCCCCCAC 3' HOXB4 hsa-miR-1275 beg:978 end:994 pic:3' CTGTCGGAGAGGGGGTG 5'& |||| |||.||||. &5' ---AGCC-CTCTCCCAT 3' HOXB4 hsa-miR-1275 beg:605 end:624 pic:3' CTGTCGGAGAGGGGGTG 5'& ||| |||||||.||. &5' -ACACACTCTCCCTCAT 3' HOXB4 hsa-miR-1275 beg:201 end:214 pic:3' CTGTCGGAGAGGGGGTG 5'& .||| |||||| &5' ---GGCC---CCCCCA- 3' HOXB4 hsa-miR-1275 beg:526 end:541 pic:3' CTGTCGGAGAGGGGGTG 5'& ..| |||||||| &5' -----TTTGTCCCCCAC 3' HOXB4 hsa-miR-1280 beg:53 end:73 pic:3' CCC-ACCGTCGCCACCCT 5'& ||| ||| .|.|| |||| &5' GGGATGG-GGTGGGGGGA 3' HOXB4 hsa-miR-1281 beg:66 end:84 pic:3' CCCTCTCCTCCTCCGCT 5'& |||| ||||||.||| &5' GGGACAGGAGGGGGC-- 3' HOXB4 hsa-miR-1286 beg:380 end:399 pic:3' TCCCGAGTAGAACCAGGACGT 5'& ||| ||||| |||.||. &5' --GGCCCATCT--GTCTTGT- 3' HOXB4 hsa-miR-1289 beg:503 end:524 pic:3' TTTTACGTCTAA-GGACCTGAGGT 5'& | ||| ||||||.|.| &5' -----GAAGACAGCCTGGATTTC- 3' HOXB4 hsa-miR-1290 beg:88 end:112 pic:3' AGGGACTAGG----TTTTTAGGT 5'& |||| || |||||||.| &5' --CCTGGGCCCCGGAAAAATCTA 3' HOXB4 hsa-miR-1290 beg:1124 end:1143 pic:3' AGGGACT-AGGTTTTTAGGT 5'& |.||| ||.|.|| || &5' --CTTGAGTCTAGAAC-CC- 3' HOXB4 hsa-miR-1291 beg:627 end:650 pic:3' TGACGACCAGAAGTCAGTCCCGGT 5'& ||| |||| | ||||||| &5' --TGCCCA--TTCACTGAGGGCCA 3' HOXB4 hsa-miR-1296 beg:149 end:172 pic:3' CCTCTACCTCGGTCC--CGGGATT 5'& ||| |||| .|| ||..|| &5' -GAGGGGGAG--GGGAAGCTTTA- 3' HOXB4 hsa-miR-1296 beg:66 end:87 pic:3' CCTCTA-CCTCGGTCCCGGGATT 5'& ||.|| |||| .|||||||. &5' GGGGACAGGAG--GGGGCCCTG- 3' HOXB4 hsa-miR-1298 beg:637 end:656 pic:3' ATGTAGACCTGTCGG-CTTACTT 5'& || || .||| |||||| &5' -----CT-GAGGGCCAGAATGA- 3' HOXB4 hsa-miR-1301 beg:302 end:320 pic:3' CTTCAGTGAGGGTCCG---TCGACGTT 5'& .||| .||||||. &5' -----------TAGGAGGAGGCTGCAG 3' HOXB4 hsa-miR-130astar beg:909 end:932 pic:3' CGTCTGTCATCGTGTTACACTT 5'& .|||| |||||||| &5' -TAGACTGAAAATGAATGTGAA 3' HOXB4 hsa-miR-130bstar beg:701 end:723 pic:3' CATCACGTT-GTCCCTTTCTCA 5'& .| |||| .||||||.|.| &5' --GGAGCAAGTAGGGAAGGGG- 3' HOXB4 hsa-miR-143 beg:353 end:366 pic:3' CTCGATGTCACGAAGTAGAGT 5'& |.|||||||. &5' ----------GTTTCATCTT- 3' HOXB4 hsa-miR-144 beg:1153 end:1172 pic:3' TCATGTAGTAGATATGACAT 5'& |.||| | |.|.||||| &5' ---ATATC-TGTGTGCTGTA 3' HOXB4 hsa-miR-1470 beg:52 end:72 pic:3' GCCCC-ACGTGCCCGCCTCCCG 5'& |||| || |||.||.||| &5' -GGGGATG---GGGTGGGGGG- 3' HOXB4 hsa-miR-150 beg:668 end:688 pic:3' GTGACCATGTTCCCAACCCTCT 5'& ||| || .||||||||.| &5' CACC-GT---GGGGTTGGGGG- 3' HOXB4 hsa-miR-151-3p beg:1115 end:1138 pic:3' GGAGTTCCT--CGAAGTCAGATC 5'& ||| .||. |||| ||||||| &5' -CTCTGGGGCTGCTTGAGTCTAG 3' HOXB4 hsa-miR-1538 beg:78 end:99 pic:3' TCCTTGTCGTCGTCGGGCCCGGC 5'& ||..| | .|||.||||| &5' -GGGGCCCT-GGGGCCTGGGCC- 3' HOXB4 hsa-miR-181a beg:907 end:929 pic:3' TGAG-TGGCTGTCGCAACTTACAA 5'& || ||.|| ||||||| &5' -CTAGACTGAAAA---TGAATGT- 3' HOXB4 hsa-miR-181b beg:911 end:929 pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& ||.|| ||||||||| &5' ----ACTGAA---AATGAATGT- 3' HOXB4 hsa-miR-181c beg:907 end:929 pic:3' TGAG-TGGCTGTCCAACTTACAA 5'& || ||.|| ||||||| &5' -CTAGACTGAAAA--TGAATGT- 3' HOXB4 hsa-miR-181d beg:911 end:929 pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& ||.|| ||||||||| &5' ----ACTGAA---AATGAATGT- 3' HOXB4 hsa-miR-1825 beg:408 end:426 pic:3' CCTCTCCT-CCCGTGACCT 5'& ||||| || |||| || &5' GGAGAAGACGGGC-CT--- 3' HOXB4 hsa-miR-1825 beg:696 end:718 pic:3' CCTCTCCTCC--CGTGACCT 5'& ||||.|||| |.| ||| &5' GGAGGGGAGCAAGTAG-GGA 3' HOXB4 hsa-miR-1825 beg:59 end:78 pic:3' CCTCTCCTCCCGTGACCT 5'& ||.| ||.||| || ||| &5' GGGGTGGGGGG-ACAGGA 3' HOXB4 hsa-miR-182star beg:1119 end:1142 pic:3' ATCAACCG-----TTCAGATCTTGGT 5'& ||| .||||||||||| &5' -----GGCTGCTTGAGTCTAGAACC- 3' HOXB4 hsa-miR-184 beg:519 end:536 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& .||| ||||..|||| &5' -TCCT------TTCTTTGTCC- 3' HOXB4 hsa-miR-185 beg:1062 end:1076 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& |.| ||||||| &5' ---------GTCC-TCTCTCC- 3' HOXB4 hsa-miR-185 beg:230 end:246 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& .|| ||||||.||. &5' -------TTG-CTTTCTTTCT- 3' HOXB4 hsa-miR-185 beg:898 end:911 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||| ||||||| &5' ---------GCC--TCTCTCC- 3' HOXB4 hsa-miR-188-5p beg:40 end:62 pic:3' GGGAGGTGG----TACGTTCCCTAC 5'& .| .||||.|||||| &5' ------GCAGTGAGTGCAGGGGATG 3' HOXB4 hsa-miR-18a beg:106 end:133 pic:3' GATAGACGTGATCTAC-GTGGAAT 5'& |||||||| || |||.||| &5' CTATCTGCCCTCCCCCACACTTTA 3' HOXB4 hsa-miR-1909 beg:475 end:492 pic:3' GCCACTCGTGGGCCGGGGACGC 5'& || |.| |||.|||| &5' ------GC-CTCCGCCTCTGC- 3' HOXB4 hsa-miR-1910 beg:59 end:82 pic:3' TCCGCCGTCCGTGTCCTGACC 5'& .||.|| .|| |||||| || &5' GGGTGGGGGG-ACAGGAGGGG 3' HOXB4 hsa-miR-193b beg:827 end:850 pic:3' TCG-CCCTGAAACT-CCCGGTCAA 5'& .|| ||| ||| ||||||||| &5' GGCAGGG----TGAGGGGCCAGTT 3' HOXB4 hsa-miR-1979 beg:50 end:71 pic:3' ATCAGTTCACTTCGTCACCCTC 5'& ||.| || | .|||||.| &5' ----CAGGGGATGGGGTGGGGG 3' HOXB4 hsa-miR-198 beg:512 end:537 pic:3' CTTGGA--TAGAGGG--GAGACCTGG 5'& .||| ||.|||. ||.|| || &5' --GCCTGGATTTCCTTTCTTTGTCCC 3' HOXB4 hsa-miR-19b-1star beg:967 end:984 pic:3' CGACCTACGTTTGGACGTTTTGA 5'& |||||. ||||.|.| &5' ---GGATGT-----TGCAGAGC- 3' HOXB4 hsa-miR-200c beg:569 end:590 pic:3' AGGTAGTAATGGG----C-CGTCATAAT 5'& |.|| | |||||.|| &5' --------TGCCAGATAGTGCAGTGTT- 3' HOXB4 hsa-miR-204 beg:149 end:166 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& || |. .|.||||| &5' --------GAGGGGGAGGGGAA 3' HOXB4 hsa-miR-206 beg:1071 end:1097 pic:3' GGTGT-GTGAAGGAATGTAAGGT 5'& || | |||.|| |||||||| &5' CCTTTTCTCTTTCTGACATTCCA 3' HOXB4 hsa-miR-20astar beg:564 end:587 pic:3' GAAATTCACGAG-TATTACGTCA 5'& |.| ||| |||.|||||| &5' ---TGACTGCCAGATAGTGCAGT 3' HOXB4 hsa-miR-20astar beg:34 end:56 pic:3' GAAATTCACGAGTA--TTACGTCA 5'& ..||| || |.||||| &5' ----GGGTGGGCAGTGAGTGCAG- 3' HOXB4 hsa-miR-211 beg:146 end:166 pic:3' TCCGCTTCCTACTGTTTCCCTT 5'& |||| |. .|.||||| &5' ----GAAGAG-GGGGAGGGGAA 3' HOXB4 hsa-miR-2276 beg:968 end:982 pic:3' GGAGCGGAGACTGTGAACGTCT 5'& ||.. ||||||| &5' ----------GATG-TTGCAGA 3' HOXB4 hsa-miR-2278 beg:592 end:618 pic:3' GGT-CCGTTGTGTGTGAC-GAGAG 5'& || ||.||||||||| ||||| &5' -CACGGTAACACACACACACTCTC 3' HOXB4 hsa-miR-2278 beg:222 end:241 pic:3' GGTCCGTTGTGTGTGACGAGAG 5'& ||| | .||||.|| &5' -----CAAATCTC-TTGCTTTC 3' HOXB4 hsa-miR-25 beg:565 end:585 pic:3' AGTCTGGC--TCTGTTCACGTTAC 5'& |||.| |||. ||||||.| &5' ---GACTGCCAGAT-AGTGCAGT- 3' HOXB4 hsa-miR-25star beg:467 end:487 pic:3' GTTAACGGGTT--CAGAGGCGGA 5'& ||.|.. | |||||||| &5' -----GCTCGGCCGCCTCCGCCT 3' HOXB4 hsa-miR-26a beg:1109 end:1133 pic:3' TCGGATAG-GACCTA-ATGAACTT 5'& |||| | ||||. |.|||||. &5' --CCTACCTCTGGGGCTGCTTGAG 3' HOXB4 hsa-miR-26b beg:1111 end:1133 pic:3' TGGATAGGACTTA-ATGAACTT 5'& |||| |||.. |.|||||. &5' ACCT---CTGGGGCTGCTTGAG 3' HOXB4 hsa-miR-2861 beg:531 end:552 pic:3' GGCGGGTGGCGGTCCGGGG 5'& || |||||. ||. ||| &5' CC-CCCACTCCCGATACCC 3' HOXB4 hsa-miR-2909 beg:714 end:734 pic:3' GGTTCTCTACAACCGGGATTG 5'& |||.|. |||||.|.|| &5' --AAGGGGG--TGGCCTTGAC 3' HOXB4 hsa-miR-296-5p beg:64 end:87 pic:3' TGTCCTAACTCC-CCCCCGGGA 5'& .||. ||| ||||||||| &5' --GGGGGACAGGAGGGGGCCCT 3' HOXB4 hsa-miR-296-5p beg:26 end:45 pic:3' TGTCCTAACTCCCCCCCGGGA 5'& |.||. ||.||| |||| &5' -CGGGG-TGGGGGTGGGC--- 3' HOXB4 hsa-miR-296-5p beg:672 end:693 pic:3' TGTCCTAACTCCCCCCCGGGA 5'& . ||.|||.||| |||| &5' GTGGGGTTGGGGGTGGGC--- 3' HOXB4 hsa-miR-296-5p beg:49 end:74 pic:3' TGTCCTA-ACTCC-CCCCCGGGA 5'& .||||. ||.|| ||||| | &5' GCAGGGGATGGGGTGGGGGGAC- 3' HOXB4 hsa-miR-29b-1star beg:1083 end:1104 pic:3' AGATTTGGT-GGTATACTTTGGTCG 5'& ||| .|| ||| ||||||| &5' TCT-GACATTCCA----AAACCAG- 3' HOXB4 hsa-miR-29b-1star beg:913 end:937 pic:3' AGATTTGGTGGTATACTTTGGTCG 5'& ||.|| ||.||||||.|| &5' -CTGAAAATGAATGTGAAACTAG- 3' HOXB4 hsa-miR-29b-2star beg:922 end:937 pic:3' GATTCGGTGGTACACTTTGGTC 5'& |||||||||.|| &5' ----------ATGTGAAACTAG 3' HOXB4 hsa-miR-30astar beg:898 end:921 pic:3' CGACGTTTGTAGG--CTGACTTTC 5'& || ||| |||||||| &5' ---GCCTCTCTCCTAGACTGAAA- 3' HOXB4 hsa-miR-30c-1star beg:971 end:993 pic:3' CCTCATTTGT--TGGGAGAGGGTC 5'& || .|| .|||||||||| &5' ---GTT-GCAGAGCCCTCTCCCA- 3' HOXB4 hsa-miR-30c-2star beg:971 end:993 pic:3' TCTCATT-TGTCGGAAGAGGGTC 5'& || | |||| ||||||| &5' ---GTTGCAGAGCCCTCTCCCA- 3' HOXB4 hsa-miR-3125 beg:386 end:406 pic:3' AGAGAGGTGTCGAAGGAGAT 5'& ||| ||. |.|||||||. &5' TCTGTCTT--GTTTCCTCTG 3' HOXB4 hsa-miR-3125 beg:1066 end:1084 pic:3' AGAGAGGTGTCGAAGGAGAT 5'& ||||||| .||.|||| &5' TCTCTCC----TTTTCTCT- 3' HOXB4 hsa-miR-3125 beg:790 end:807 pic:3' AGAGAGGTGTC-GAAGGAGAT 5'& | .| ||||||||. &5' -------AGGGCCTTCCTCTG 3' HOXB4 hsa-miR-3128 beg:566 end:578 pic:3' TACTCTCAAAAAATGAACGGTCT 5'& || ||||||| &5' -------------AC-TGCCAGA 3' HOXB4 hsa-miR-3132 beg:1064 end:1085 pic:3' AGGAGACTCGAGGAAGAGATGGGT 5'& |||||| ||||||.||| |.. &5' TCCTCT---CTCCTTTTCT-CTT- 3' HOXB4 hsa-miR-3132 beg:96 end:119 pic:3' AGGAGACTCGAGGAAGAGATGGGT 5'& || ||. |||.||| &5' -CCGGAAAAATCTA--TCTGCCC- 3' HOXB4 hsa-miR-3140 beg:202 end:219 pic:3' TGATGGACTTAAGGGTTTTCGA 5'& .|| ||||.|||| &5' ---GCCCC----CCCAGAAGC- 3' HOXB4 hsa-miR-3153 beg:1062 end:1083 pic:3' TTTACAGGGATGAGCGAAAGGGG 5'& ||||. ||| ||||.|.| &5' ----GTCCTCTCTC-CTTTTCTC 3' HOXB4 hsa-miR-3154 beg:1066 end:1089 pic:3' AGACGAGGGTTGAGGGGAAGAC 5'& ||| ||||. .||.|.||||| &5' TCT-CTCCTT-TTCTCTTTCTG 3' HOXB4 hsa-miR-3160 beg:317 end:339 pic:3' ACCCGAA-AGATCAGAGTCGAGA 5'& ||| || |.||||||.| &5' ---GCTCCTCGT-TTTCAGCTTT 3' HOXB4 hsa-miR-3173 beg:1062 end:1086 pic:3' ACCGGACGGAT-AAAGGAGGAAA 5'& | ||| .|| |||.|||.|| &5' -GTCCTCTCTCCTTTTCTCTTT- 3' HOXB4 hsa-miR-3175 beg:1053 end:1076 pic:3' TGCAGTG-ACGCAAGAGAGGGGC 5'& ||||. || || |||||.|| &5' --GTCATGTGAGTCCTCTCTCC- 3' HOXB4 hsa-miR-3178 beg:943 end:954 pic:3' GCTAGGCCGGCGCGGGG 5'& .|.||||| &5' ---------TGTGCCCC 3' HOXB4 hsa-miR-3180-5p beg:839 end:862 pic:3' GCTGCACCCCGC----CTCGCAGACCTTC 5'& ||||| |||. |||||.|| &5' ------GGGGCCAGTTGAGT-TCTGGGAG 3' HOXB4 hsa-miR-3181 beg:827 end:846 pic:3' GGCCG--CGGCTCCCGGGCTA 5'& .||| | .||||| || &5' -TGGCAGGGTGAGGGGCC--- 3' HOXB4 hsa-miR-3182 beg:135 end:153 pic:3' CTGATGTGATGTCTTCG 5'& || || .|||||| &5' GAATAAAC-GCAGAAG- 3' HOXB4 hsa-miR-3183 beg:143 end:162 pic:3' AGGCTCG-CTGAGGCTCTCTCCG 5'& || || |.|.|||| &5' -----GCAGAAGA-GGGGGAGG- 3' HOXB4 hsa-miR-3184 beg:895 end:908 pic:3' TTTTCGAGCCAGACTCCGGGGAGT 5'& || |||.||| &5' -------------GAAGCCTCTC- 3' HOXB4 hsa-miR-3191 beg:514 end:538 pic:3' GACAGACC----GGTC-GATGCAGGGGT 5'& |||| || || .|||||| &5' ----CTGGATTTCCTTTCTTTGTCCCC- 3' HOXB4 hsa-miR-3195 beg:461 end:480 pic:3' TTGGGCCCGGGCC-GCGC 5'& ..||| |||.||| ||| &5' GGCCC-GGCTCGGCCGC- 3' HOXB4 hsa-miR-3195 beg:79 end:98 pic:3' TTGGG--CCCGGGCCGCGC 5'& ..||| |||||.|| || &5' GGCCCTGGGGCCTGG-GC- 3' HOXB4 hsa-miR-3195 beg:782 end:796 pic:3' TTGGGCCCGGGCCGCGC 5'& .||||||| || || &5' GACCCGGGA--GG-GC- 3' HOXB4 hsa-miR-3196 beg:895 end:912 pic:3' CTCCGGGGACGGCGGGGC 5'& || |||.|| |. ||. &5' GAAGCCTCT-CT-CCT-- 3' HOXB4 hsa-miR-3200 beg:830 end:842 pic:3' GTCTGGACTCATCGCGTTCCAC 5'& |||.|||| &5' --------------GCAGGGTG 3' HOXB4 hsa-miR-3202 beg:1099 end:1113 pic:3' TAATTTCGAGAAGAGGGAAGGT 5'& |.|| ||||||| &5' ----AGGC------CCCTTCC- 3' HOXB4 hsa-miR-3202 beg:1060 end:1081 pic:3' TAATTTCGAGA-AGAGGGAAGGT 5'& .|| || |||||.||.| &5' ----GAGTCCTCTCTCCTTTTC- 3' HOXB4 hsa-miR-320a beg:317 end:339 pic:3' AGCGGGAGAGTT-GGGTCGAAAA 5'& ||.| |||. ..||||||| &5' --GCTC-CTCGTTTTCAGCTTT- 3' HOXB4 hsa-miR-320b beg:317 end:339 pic:3' AACGGGAGAGTT-GGGTCGAAAA 5'& ||.| |||. ..||||||| &5' --GCTC-CTCGTTTTCAGCTTT- 3' HOXB4 hsa-miR-32 beg:565 end:585 pic:3' ACGTTGAATCATTA-CACGTTAT 5'& .||| .|| |||||.| &5' ---GACTGCCAGATAGTGCAGT- 3' HOXB4 hsa-miR-326 beg:57 end:80 pic:3' GACCTC-CTTCCCGGGTCTCC 5'& |||.| |..||| .|||| &5' -TGGGGTGGGGGGACAGGAGG 3' HOXB4 hsa-miR-330-3p beg:573 end:593 pic:3' AGAGAC-GTC-CGGCACACGAAACG 5'& | .|| || |||.|||| &5' -----GATAGTGCA--GTGTTTTG- 3' HOXB4 hsa-miR-338-3p beg:489 end:508 pic:3' GTTGTTTTAGTGACT---ACGACCT 5'& .|||| ||||||| &5' ---------TACTGCCGCTGCTGGA 3' HOXB4 hsa-miR-33a beg:568 end:585 pic:3' ACGTTACGTTGATGTTACGTG 5'& ||| |.|.|||| &5' -----TGCCAG-ATAGTGCA- 3' HOXB4 hsa-miR-33b beg:568 end:585 pic:3' CGTTACGTTGTC-GTTACGTG 5'& ||| ||| .|.|||| &5' ----TGC--CAGATAGTGCA- 3' HOXB4 hsa-miR-342-5p beg:550 end:566 pic:3' AGTTAGTGTCTATCGTGGGGA 5'& .| || |||||||. &5' ------GC-GAAAGCACCCT- 3' HOXB4 hsa-miR-367 beg:569 end:585 pic:3' AGTGGTAACGATTTCACGTTAA 5'& .||| ||||||.| &5' --GCCAGAT----AGTGCAGT- 3' HOXB4 hsa-miR-367star beg:676 end:698 pic:3' TCTCAACGTATAATCGTTGTCA 5'& .|.|||| . .||||||| &5' GGGGTTGGGGGTGGGCAACAG- 3' HOXB4 hsa-miR-371-5p beg:944 end:966 pic:3' TCACGGGGGT-GTCAAACTCA 5'& |||||||. |||| ||.| &5' -GTGCCCCTCCCAGTCTGGG- 3' HOXB4 hsa-miR-378 beg:1079 end:1104 pic:3' GGAAGACTG--AGGTTCAGGTCA 5'& |.||||||| ||||| |||| &5' CTTTCTGACATTCCAAAACCAG- 3' HOXB4 hsa-miR-378 beg:1119 end:1138 pic:3' GGAAGACTGA--GGTTCAGGTCA 5'& |.|| . ||||.|| &5' ------GGCTGCTTGAGTCTAG- 3' HOXB4 hsa-miR-378 beg:368 end:384 pic:3' GGAAGACTGAGGTTCAGGTCA 5'& || |||.|||||| &5' -------ACGCCAGGTCCAG- 3' HOXB4 hsa-miR-378 beg:866 end:886 pic:3' GGAAGACTGAGGT--TCAGGTCA 5'& || ||||.. ||||||| &5' ----CT-ACTCTGCCAGTCCAG- 3' HOXB4 hsa-miR-378c beg:1119 end:1138 pic:3' GGTGAGAAGACTGA--GGTTCAGGTCA 5'& |.|| . ||||.|| &5' ----------GGCTGCTTGAGTCTAG- 3' HOXB4 hsa-miR-378c beg:866 end:886 pic:3' GGTGAGAAGACTGAGGTTCAGGTCA 5'& |||| |||| || ||||||| &5' -CACTACTCTG---CC-AGTCCAG- 3' HOXB4 hsa-miR-384 beg:919 end:940 pic:3' ATACTTGTTAAA-GATCCTTA 5'& |||||.. ||||||| &5' -ATGAATGTGAAACTAGGAA- 3' HOXB4 hsa-miR-412 beg:823 end:842 pic:3' TGCCGATCACCTGGTCCACTTCA 5'& ||| ||| | .|||||.| &5' ---GCT--TGG-CAGGGTGAGG- 3' HOXB4 hsa-miR-422a beg:866 end:886 pic:3' CGGAAGACTGGGAT--TCAGGTCA 5'& || ||.||. ||||||| &5' -----CT-ACTCTGCCAGTCCAG- 3' HOXB4 hsa-miR-4255 beg:1076 end:1094 pic:3' AGGTAGAGACTTGTGAC 5'& ||. |.|||| |||.| &5' TCTCTTTCTG-ACATT- 3' HOXB4 hsa-miR-4257 beg:1098 end:1122 pic:3' GAGTCAGGGG-----TGGAGACC 5'& ||| |||| |||||||| &5' --CAGGCCCCTTCCTACCTCTGG 3' HOXB4 hsa-miR-4257 beg:468 end:491 pic:3' GAGTCA--GG-GGTGGAGACC 5'& |||.| || ||.|||||| &5' CTCGGCCGCCTCCGCCTCTG- 3' HOXB4 hsa-miR-4258 beg:50 end:70 pic:3' GGTTCC--GCCACCGCCCC 5'& ||.|| .|| ||.|||| &5' -CAGGGGATGG-GGTGGGG 3' HOXB4 hsa-miR-4261 beg:1194 end:1212 pic:3' ACCCAGGGACAAAGGA 5'& ||| |.|.||| || &5' TGGTTTCTTGTGACC- 3' HOXB4 hsa-miR-4268 beg:824 end:846 pic:3' GTGTAGGAC--TCTC-CTCCTCGG 5'& |.|| ||.| ||||.||| &5' -----CTTGGCAGGGTGAGGGGCC 3' HOXB4 hsa-miR-4268 beg:694 end:709 pic:3' GTGTAGGACTCTCCTCCTCGG 5'& ||| |.||||| &5' --------GAGGAGGGGAGC- 3' HOXB4 hsa-miR-4270 beg:112 end:132 pic:3' CGGGAGGGGAC-TGAGGGACT 5'& ||||||||| |||.. &5' GCCCTCCCCCACACTTT---- 3' HOXB4 hsa-miR-4270 beg:556 end:575 pic:3' CGGGAGGGGACTGAGGGACT 5'& || | ||.|||||| || &5' GCAC-CCTCTGACTGCC--- 3' HOXB4 hsa-miR-4274 beg:1117 end:1129 pic:3' GTCCCCCTCCCTGACGAC 5'& |||.||||| &5' --------GGGGCTGCT- 3' HOXB4 hsa-miR-4274 beg:150 end:169 pic:3' GTCCCCCTCCCTGACGAC 5'& ||||||||||. ||| &5' -AGGGGGAGGGGAAGCT- 3' HOXB4 hsa-miR-4274 beg:829 end:851 pic:3' GTCCCCCTCCCTGA-CGAC 5'& ||||| |||||.| |.|| &5' CAGGGTGAGGGGCCAGTTG 3' HOXB4 hsa-miR-4274 beg:709 end:728 pic:3' GTCCCCCTCCCTGACGAC 5'& .|||| .|||. || &5' TAGGGAAGGGGGTGGC-- 3' HOXB4 hsa-miR-4274 beg:960 end:978 pic:3' GTCCC-CCTCCCTGACGAC 5'& ||| ||||| ||.|| &5' --GGGAGGAGGA--TGTTG 3' HOXB4 hsa-miR-4276 beg:628 end:645 pic:3' CGTGTACTCAGTGACTC 5'& || ||| |||||||| &5' GCCCAT---TCACTGAG 3' HOXB4 hsa-miR-4279 beg:955 end:972 pic:3' CTTC-GGCCCTCCTCTC 5'& || |.||||||||. &5' --AGTCTGGGAGGAGG- 3' HOXB4 hsa-miR-4279 beg:146 end:165 pic:3' CTTCGG-CCCTCCTCTC 5'& |||| ||||||.|| &5' GAAGAGGGGGAGGGGA- 3' HOXB4 hsa-miR-4281 beg:110 end:131 pic:3' GGGGGGAGGGGCCCTGGG 5'& |. |||||||| ||.. &5' CTGCCCTCCCCCACACTT 3' HOXB4 hsa-miR-4284 beg:672 end:693 pic:3' TACCCC-ACTA-CACTCGGG 5'& .||||| ||. |||.|| &5' GTGGGGTTGGGGGTGGGC-- 3' HOXB4 hsa-miR-4284 beg:1051 end:1069 pic:3' TACCCCAC--TACACTCGGG 5'& ||| |||||||.|| &5' -----GTGTCATGTGAGTCC 3' HOXB4 hsa-miR-4286 beg:22 end:39 pic:3' CCATGGT-CCTCACCCCA 5'& ||| ||.|||||| &5' ---ACCTCGGGGTGGGG- 3' HOXB4 hsa-miR-4287 beg:143 end:160 pic:3' TTTCACGGGAGTTCCCTCT 5'& || .||||.|| &5' -----GCAGAAGAGGGGGA 3' HOXB4 hsa-miR-4288 beg:772 end:788 pic:3' CCTTTGAGTCGTCTGTT 5'& ||.|||||| |||| &5' -GAGACTCAG-AGAC-- 3' HOXB4 hsa-miR-4289 beg:719 end:736 pic:3' ACTATCGGGACGTGTTACG 5'& |.|.|||.|| |||| &5' -GGTGGCCTTG-ACAA--- 3' HOXB4 hsa-miR-4290 beg:149 end:168 pic:3' CTCCCTTCTTTCCTCCCGT 5'& ||||| .||..||| || &5' GAGGG-GGAGGGGAA-GC- 3' HOXB4 hsa-miR-4291 beg:491 end:508 pic:3' TCGACAAGGACGACTT 5'& ||| ||||||.| &5' --CTGCCGCTGCTGGA 3' HOXB4 hsa-miR-4296 beg:112 end:128 pic:3' ACTCGGACTCGGGTGTA 5'& ||| |||||| &5' ---GCCCTCCCCCACA- 3' HOXB4 hsa-miR-4296 beg:977 end:995 pic:3' ACTCGGACTCGGGTGTA 5'& ||||| ||||.| &5' -GAGCCCTCTCCCATA- 3' HOXB4 hsa-miR-4296 beg:85 end:100 pic:3' ACTCGGACTCGGGTGTA 5'& |.|||||.|||| | &5' -GGGCCTGGGCCC-C-- 3' HOXB4 hsa-miR-4302 beg:972 end:989 pic:3' GAGCGACTCGGTGTGACC 5'& |.|| ||||| | || &5' -TTGCAGAGCC-CTCT-- 3' HOXB4 hsa-miR-4306 beg:1062 end:1076 pic:3' ATGACGGAAAGAGAGGT 5'& |.| ||||||| &5' ----GTCC-TCTCTCC- 3' HOXB4 hsa-miR-4306 beg:898 end:911 pic:3' ATGACGGAAAGAGAGGT 5'& ||| ||||||| &5' ----GCC--TCTCTCC- 3' HOXB4 hsa-miR-4306 beg:1069 end:1086 pic:3' ATGACGGAAAGAGAGGT 5'& || |.|||||||.. &5' --CTCCTTTTCTCTTT- 3' HOXB4 hsa-miR-4306 beg:230 end:246 pic:3' ATGACGGAAAGAGAGGT 5'& .|| ||||||.||. &5' --TTG-CTTTCTTTCT- 3' HOXB4 hsa-miR-4307 beg:268 end:287 pic:3' CCTTTGTCCTTTTTTGTAA 5'& |||. |||||.||| | &5' -GAAGAAGGAAGAAAGA-- 3' HOXB4 hsa-miR-4307 beg:926 end:949 pic:3' CCTTTG-TCCTT--TTTTGTAA 5'& ||||| ||||| ||||..| &5' -GAAACTAGGAAATAAAATGT- 3' HOXB4 hsa-miR-4311 beg:1067 end:1087 pic:3' GTGTGAGTC-GAGAGAAAG 5'& | ||| .|||||||| &5' --CTCTCCTTTTCTCTTTC 3' HOXB4 hsa-miR-4311 beg:227 end:245 pic:3' GTGTGAGT-CGAGAGAAAG 5'& ||| |||.|||||| &5' ----CTCTTGCTTTCTTTC 3' HOXB4 hsa-miR-4311 beg:474 end:490 pic:3' GTGTGAGTCGAGAGAAAG 5'& |.| ||| || |||| &5' CGC-CTCCGC-CTCT--- 3' HOXB4 hsa-miR-4312 beg:65 end:85 pic:3' ACCCCTGTCCTTGTTCCGG 5'& ||||||||||. ..|||| &5' -GGGGACAGGAG-GGGGCC 3' HOXB4 hsa-miR-4312 beg:679 end:701 pic:3' ACCCCTGTCC-TTGT-TCCGG 5'& |||||. || |||| ||| &5' TGGGGGTGGGCAACAGAGG-- 3' HOXB4 hsa-miR-4312 beg:75 end:99 pic:3' ACCCCTGT--CCTTGT-TCCGG 5'& ||||.| ||..| .|||| &5' -GGGGGCCCTGGGGCCTGGGCC 3' HOXB4 hsa-miR-4313 beg:711 end:725 pic:3' CCCAAACCCCGGTCCCCCGA 5'& ||| ||||||. &5' -------GGGA-AGGGGGT- 3' HOXB4 hsa-miR-4313 beg:849 end:868 pic:3' CCCAA-ACCC-CGGTCCCCCGA 5'& ||| |||| ||. |||| &5' --GTTCTGGGAGCT---GGGC- 3' HOXB4 hsa-miR-4317 beg:39 end:49 pic:3' TTTGAGGGACCGTTACA 5'& ||||.|| &5' ---------GGCAGTG- 3' HOXB4 hsa-miR-4320 beg:306 end:326 pic:3' TCCTTCGATGTCTTAGGG 5'& ||||.|||.||| |||. &5' AGGAGGCTGCAGC-TCCT 3' HOXB4 hsa-miR-4320 beg:966 end:986 pic:3' TCCTTCGATGTCTTAGGG 5'& |||| |.|.||||. ||| &5' AGGATGTTGCAGAG-CCC 3' HOXB4 hsa-miR-4323 beg:673 end:689 pic:3' AGACTCCGACACCCCGAC 5'& ||.||.|| ||||. &5' --TGGGGTTG-GGGGT-- 3' HOXB4 hsa-miR-4325 beg:566 end:585 pic:3' AGTGAC--TCTGTTCACGTT 5'& |||| |||. ||||||. &5' --ACTGCCAGAT-AGTGCAG 3' HOXB4 hsa-miR-4326 beg:956 end:980 pic:3' CAGACCCTCTGTCT-CCTTGT 5'& ||||||||| .|| | .|| &5' GTCTGGGAGGAGGATGTTGCA 3' HOXB4 hsa-miR-4328 beg:848 end:866 pic:3' TTAGGACCCTTTTGACC 5'& |.|.|||||| .|||| &5' AGTTCTGGGA--GCTGG 3' HOXB4 hsa-miR-449cstar beg:691 end:718 pic:3' TGTCT-CTCCTCACGTTGATCGTT 5'& ||||| ||||.| |||| ||| .| &5' ACAGAGGAGGGGAGCAAGTAGGGA 3' HOXB4 hsa-miR-450a beg:135 end:152 pic:3' TATAATCCTTGTGTAGCGTTTT 5'& |||.| ||||.|| &5' -------GAATAAA-CGCAGAA 3' HOXB4 hsa-miR-450b-5p beg:963 end:983 pic:3' ATAAGTCCTTGTATAACGTTTT 5'& ||||. ||.|||||.|. &5' -----AGGAGGATGTTGCAGAG 3' HOXB4 hsa-miR-454star beg:45 end:66 pic:3' CGTCTC-TGTTATAACTATCCCA 5'& ||| .||. |||.|||| &5' ---GAGTGCAGGG--GATGGGGT 3' HOXB4 hsa-miR-466 beg:1143 end:1155 pic:3' TACACACAACGCACATACACATA 5'& ||||||||. &5' -------------GTATGTGTG- 3' HOXB4 hsa-miR-483-3p beg:145 end:165 pic:3' TTCTGC-CCTCCTCTCCTCACT 5'& ||| | ||.||||.||| &5' -AGAAGAGGGGGAGGGGA---- 3' HOXB4 hsa-miR-483-5p beg:1065 end:1088 pic:3' GAGGGAAGAAAGGAGGGCAGAA 5'& |||.|| ||||.|||.. ||| &5' CTCTCTCCTTTTCTCTT-TCT- 3' HOXB4 hsa-miR-485-3p beg:693 end:718 pic:3' TCT-CTCCTCTCGGCACATA-CTG 5'& ||| ||||.|||| ||| || &5' AGAGGAGGGGAGCAA-GTAGGGA- 3' HOXB4 hsa-miR-511 beg:491 end:513 pic:3' ACTGACGTCT-CG-TTTTCTGTG 5'& ||||| | || ..|||||| &5' --ACTGCCGCTGCTGGAAGACA- 3' HOXB4 hsa-miR-511 beg:882 end:906 pic:3' ACT-GACGTCTCGTTTTCTGTG 5'& || .||.| ||||.||| | | &5' -GAGTTGTACAGCAGAAGCCTC 3' HOXB4 hsa-miR-513b beg:1187 end:1210 pic:3' TATTTACT-GTGGAGGAACACTT 5'& ||||||| .. .|.||||||| &5' ATAAATGTTTGGTTTCTTGTGA- 3' HOXB4 hsa-miR-516a-3p beg:155 end:168 pic:3' TGGGAGACTTTCCTTCGT 5'& ||..|||||| &5' -------GAGGGGAAGC- 3' HOXB4 hsa-miR-516bstar beg:155 end:168 pic:3' TGGGAGACTTTCCTTCGT 5'& ||..|||||| &5' -------GAGGGGAAGC- 3' HOXB4 hsa-miR-518d-5p beg:1117 end:1139 pic:3' GTCTTTCACGAAGGGAGATCTC 5'& | . ||||| |||||| &5' --GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-518e beg:399 end:421 pic:3' GTGAGAC--TTCC-CTTC-GCGAAA 5'& ||||| .||| |||| || &5' --CTCTGCCGAGGAGAAGACG---- 3' HOXB4 hsa-miR-518estar beg:1117 end:1139 pic:3' GTCTTTCG-CGAAGGGAGATCTC 5'& ...|| |||| |||||| &5' ---GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-518fstar beg:1117 end:1139 pic:3' CTCTTTCACGAAGGGAGATCTC 5'& | . ||||| |||||| &5' --GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-519astar beg:1117 end:1139 pic:3' GTCTTTCG-CGAAGGGAGATCTC 5'& ...|| |||| |||||| &5' ---GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-519b-5p beg:1117 end:1139 pic:3' GTCTTTCG-CGAAGGGAGATCTC 5'& ...|| |||| |||||| &5' ---GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-519c-5p beg:1117 end:1139 pic:3' GTCTTTCG-CGAAGGGAGATCTC 5'& ...|| |||| |||||| &5' ---GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-520a-5p beg:1105 end:1124 pic:3' TCTTTCATGAAG---GGAGACCTC 5'& |||| |||||||.| &5' --------CTTCCTACCTCTGGGG 3' HOXB4 hsa-miR-520c-5p beg:1117 end:1139 pic:3' GTCTTTCACGAAGGGAGATCTC 5'& | . ||||| |||||| &5' --GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-522star beg:1117 end:1139 pic:3' GTCTTTCG-CGAAGGGAGATCTC 5'& ...|| |||| |||||| &5' ---GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-523star beg:1117 end:1139 pic:3' GTCTTTCG-CGAAGGGAGATCTC 5'& ...|| |||| |||||| &5' ---GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-525-5p beg:1112 end:1124 pic:3' TCTTTCACGTAGGGAGACCTC 5'& |||||||.| &5' ------------CCTCTGGGG 3' HOXB4 hsa-miR-526a beg:1117 end:1139 pic:3' GTCTTTCACGAAGGGAGATCTC 5'& | . ||||| |||||| &5' --GGGGCTGCTTGAGTCTAGA- 3' HOXB4 hsa-miR-526b beg:786 end:808 pic:3' TGTCTTTCACGAAGGGAGTTCTC 5'& |.|.|.| || |.|||| || &5' -CGGGAGG-GCCTTCCTCT-GA- 3' HOXB4 hsa-miR-532-3p beg:19 end:40 pic:3' ACGTTCGGAACCCACACCCTCC 5'& |.| ||| ||| |||||.| &5' --CGAACCTCGGG-GTGGGGG- 3' HOXB4 hsa-miR-532-3p beg:49 end:72 pic:3' ACGTTCGGAACCCACACCCTCC 5'& ||||.| |||| |||||.|| &5' TGCAGGGGATGGG-GTGGGGGG 3' HOXB4 hsa-miR-544 beg:965 end:983 pic:3' CTTGAACGATTTTTACGTCTTA 5'& | .| ||||||. &5' ------GAGGATGTTGCAGAG- 3' HOXB4 hsa-miR-544b beg:11 end:33 pic:3' AATCTTTACGTG-TTGGAGTCCA 5'& | | ||| ||||||.|| &5' ---GGGAGCCACGAACCTCGGG- 3' HOXB4 hsa-miR-561 beg:152 end:171 pic:3' TGAAGTTCCTAGAATTTGAAAC 5'& ..||| ||.|||| &5' -----GGGGAGGGGAAGCTTT- 3' HOXB4 hsa-miR-562 beg:1116 end:1130 pic:3' CGTTTACCATGTCGATGAAA 5'& ||| .|||.||| &5' -----TGG---GGCTGCTT- 3' HOXB4 hsa-miR-564 beg:484 end:505 pic:3' CGGACGACTG-TGGC-ACGGA 5'& .||||| || .||| |||. &5' -TCTGCT-ACTGCCGCTGCT- 3' HOXB4 hsa-miR-564 beg:615 end:634 pic:3' CGGACGACTGTGGCACGGA 5'& ||| | .|||||| &5' -CCT-CATCTTTCGTGCC- 3' HOXB4 hsa-miR-574-5p beg:592 end:616 pic:3' TGTGTGAGTGTGTGTGTGTGAGT 5'& |||. | |||||||||||||| &5' -CACGGTAACACACACACACTC- 3' HOXB4 hsa-miR-578 beg:755 end:769 pic:3' TGTTAGGATCTCGTGTTCTTC 5'& ||| ||||.| &5' ---------GAGTCCAAGGA- 3' HOXB4 hsa-miR-578 beg:257 end:275 pic:3' TGTTAGGATCTCG--TGTTCTTC 5'& ||| .||||||| &5' --------AGAAAAAGCAAGAAG 3' HOXB4 hsa-miR-582-3p beg:829 end:851 pic:3' CCAAGTCA-ACAAGTTGGTCAAT 5'& ||| || ..||||||. &5' ----CAGGGTGAGGGGCCAGTTG 3' HOXB4 hsa-miR-583 beg:1072 end:1086 pic:3' CATTACCCTGGAAGGAGAAAC 5'& |.||.|||||| &5' ---------CTTTTCTCTTT- 3' HOXB4 hsa-miR-601 beg:899 end:917 pic:3' GAGGAGGTTGTTAGGATCTGGT 5'& ||||. ||||||||. &5' --CCTCTC----TCCTAGACT- 3' HOXB4 hsa-miR-609 beg:442 end:452 pic:3' TCTCTACTCTCTTTGTGGGA 5'& .|||||| &5' ------------GACACCC- 3' HOXB4 hsa-miR-609 beg:693 end:710 pic:3' TCTCTACTCTCTTTGTGGGA 5'& |||| |||.|.|.|| &5' AGAG--GAGGGGAGCA---- 3' HOXB4 hsa-miR-623 beg:143 end:164 pic:3' TGGGTTGTCGGGGACGTTCCCTA 5'& || ||. || | |.|||| &5' ACGCAGAAGAGGG-GGAGGGGA- 3' HOXB4 hsa-miR-629star beg:52 end:74 pic:3' CGACCCGAATGCA--ACCCTCTTG 5'& ||| |.| ||||.|.|| &5' ---GGGG--ATGGGGTGGGGGGAC 3' HOXB4 hsa-miR-631 beg:82 end:103 pic:3' CGACTCCAGACCCGGT-CCAGA 5'& |||.|| ||||||| || &5' -CTGGGGCCTGGGCCCCGG--- 3' HOXB4 hsa-miR-632 beg:2 end:23 pic:3' AGGGTGT---CCTTCGTCTGTG 5'& |||.|| ||.||| ||| &5' -CCCGCACGCGGGAGC---CAC 3' HOXB4 hsa-miR-637 beg:194 end:215 pic:3' TGCGTCTCGGGCTTTCGGGGGTCA 5'& ||| .||| || ||||||| &5' ACGGGGAGGCC-----CCCCCAG- 3' HOXB4 hsa-miR-642 beg:141 end:164 pic:3' GTTCTGTGTAAA---CCTCTCCCTG 5'& ||.|| ||.|||||. &5' ----ACGCAGAAGAGGGGGAGGGG- 3' HOXB4 hsa-miR-644 beg:799 end:815 pic:3' CGAGATTCTTTCGGTGTGA 5'& ||||.| ||.|||| &5' -CTCTGA-AAGGCCA---- 3' HOXB4 hsa-miR-646 beg:1112 end:1130 pic:3' CGGAGTCTCCGTCGACGAA 5'& |||| || .||||||| &5' -CCTCT--GG-GGCTGCTT 3' HOXB4 hsa-miR-649 beg:722 end:742 pic:3' CTGAGAACTTGTTGTGTCCAAA 5'& |.| |||| ||||| |||| &5' GGC-CTTG-ACAACTCAGG--- 3' HOXB4 hsa-miR-658 beg:464 end:487 pic:3' TGGTTGC-CTGGATGAAGGGAGGCGG 5'& ||..| |.|| |||||||| &5' -CCGGCTCGGCCG-----CCTCCGCC 3' HOXB4 hsa-miR-658 beg:383 end:409 pic:3' TGGTTGCCTGGATGAAGGGAGGCGG 5'& ||| | | |.|. ||.||||.||| &5' -CCATCTGTCTTG-TTTCCTCTGCC 3' HOXB4 hsa-miR-668 beg:1160 end:1182 pic:3' CATCACCCGGCTCGGCTCACTGT 5'& ||| ||.| |||||||| &5' ---GTGTGCTGTACAGAGTGACA 3' HOXB4 hsa-miR-670 beg:704 end:718 pic:3' GTGGTGTATGTGAGTCCCTG 5'& .|| .||||| &5' --------GCAAGTAGGGA- 3' HOXB4 hsa-miR-675star beg:55 end:76 pic:3' ACT-CGCCACTCCCGTATGTC 5'& || | ||||.||| |||| &5' -GATGGGGTGGGGGG--ACAG 3' HOXB4 hsa-miR-708 beg:306 end:326 pic:3' GGGTCGA-TCTAACATTCGAGGAA 5'& .| || || ||||||| &5' ---GGAGGAGGCTGC-AGCTCCT- 3' HOXB4 hsa-miR-744star beg:675 end:698 pic:3' TCCAACTCCAATCACCGTTGTC 5'& .|||||.|| | |||||||| &5' GGGTTGGGGGT-G-GGCAACAG 3' HOXB4 hsa-miR-760 beg:869 end:891 pic:3' AGGGGTG-TCTGGGTCTCGGC 5'& |.| | || .||||||..| &5' -CTCTGCCAG-TCCAGAGTTG 3' HOXB4 hsa-miR-765 beg:1068 end:1087 pic:3' GTAGTGGAAGGAAGAGGAGGT 5'& || ||||. ||||.|.| &5' --TCTCCTTT--TCTCTTTC- 3' HOXB4 hsa-miR-767-3p beg:731 end:752 pic:3' TCTTTGGTACCCCATACTCGTCT 5'& |||. || .|||||||. &5' ---AACTCA--GGAGTGAGCAGG 3' HOXB4 hsa-miR-767-3p beg:30 end:47 pic:3' TCTTTGGTACCCCATACTCGTCT 5'& .||||| .||.|||| &5' -------GTGGGG-GTGGGCAG- 3' HOXB4 hsa-miR-877 beg:784 end:807 pic:3' GGGA---CGCGGTAGAGGAGATG 5'& ||| | ||| .||||||. &5' CCCGGGAGGGCC--TTCCTCTG- 3' HOXB4 hsa-miR-877star beg:694 end:724 pic:3' GACCCTCCTCCC----------TCTTCTCCT 5'& |||||||| .||||.||. &5' ----GAGGAGGGGAGCAAGTAGGGAAGGGGG 3' HOXB4 hsa-miR-877star beg:57 end:81 pic:3' GACCCT-CCTCCCTCTTCTCCT 5'& ||||. ||.|||| |.||||. &5' -TGGGGTGGGGGGACAGGAGGG 3' HOXB4 hsa-miR-885-3p beg:484 end:505 pic:3' ATAGGTGATGTGGGGCGACGGA 5'& || |||| . |||||||. &5' --TCTGCTAC-TGCCGCTGCT- 3' HOXB4 hsa-miR-892b beg:832 end:847 pic:3' AGATGGGTCTTTCCTCGGTCAC 5'& .| .|||.|||||| &5' -------GGTGAGGGGCCAGT- 3' HOXB4 hsa-miR-920 beg:308 end:327 pic:3' ATGACGAAGGTGTCGAGGGG 5'& | | |||||||.| &5' ----GAGGCTGCAGCTCCTC 3' HOXB4 hsa-miR-924 beg:210 end:226 pic:3' CGTTCTGTAGTGTTCTGAGA 5'& ||| .|||||.|| &5' ---AGAA---GCAAGATTC- 3' HOXB4 hsa-miR-924 beg:762 end:782 pic:3' CGTTCTGTAGTG-TTCTGAGA 5'& ||||. .|||||| &5' -CAAGGAAAAAGAGAGACTC- 3' HOXB4 hsa-miR-92a beg:569 end:585 pic:3' TGTCCGGCCCTGTTCACGTTAT 5'& ||| ||. ||||||.| &5' ----GCCA-GAT-AGTGCAGT- 3' HOXB4 hsa-miR-92b beg:569 end:585 pic:3' CCTCCGGCCCTGCTCACGTTAT 5'& ||| ||. ||||||.| &5' ----GCCA-GAT-AGTGCAGT- 3' HOXB4 hsa-miR-937 beg:39 end:64 pic:3' CCGTCTCTCA-GTCTCGCGCCTA 5'& ||||| |||| |||.| .||. &5' GGCAGTGAGTGCAGGGGATGGG- 3' HOXB4 hsa-miR-939 beg:307 end:327 pic:3' GTGGGGGTCTCGGA-GTCGAGGGGT 5'& .||| || |||||||.| &5' -------GGAGGCTGCAGCTCCTC- 3' HOXB4 hsa-miR-942 beg:403 end:419 pic:3' GTGTACCGGTTTTGTCTCTTCT 5'& |||.| .||||||| &5' ------GCCGA---GGAGAAGA 3' HOXB4 hsa-miR-942 beg:682 end:704 pic:3' GTGTACCGGTTTTGTCTCTTCT 5'& . .||| || ||||||.||. &5' -GGGTGGGCA--ACAGAGGAGG 3' HOXB4 hsv1-miR-H1 beg:1070 end:1094 pic:3' AGGTGAAGGGCAGGAAGGTAG 5'& ||| .|||.| |.|| |||. &5' TCCTTTTCTCTTTCTGACATT 3' HOXB4 hsv1-miR-H1star beg:58 end:81 pic:3' TCCCACCTTCC-GTCC-CCCCACAT 5'& .||||||..|| |||| |||| &5' GGGGTGGGGGGACAGGAGGGG---- 3' HOXB4 hsv1-miR-H4 beg:858 end:879 pic:3' ACGAACGGACAGTT-TGAGATGG 5'& ||. || |||||.|| &5' -----GCTGGGCACTACTCTGCC 3' HOXB4 hsv1-miR-H5-3p beg:1080 end:1091 pic:3' GGCCTCCCAAACCTAGAGACTG 5'& |.|||||| &5' --------------TTTCTGAC 3' HOXB4 hsv1-miR-H5-3p beg:788 end:808 pic:3' GGCCTCCCAAACCTAGAGACTG 5'& |||||| |||||| &5' --GGAGGGCCTTC--CTCTGA- 3' HOXB4 hsv1-miR-H6-3p beg:27 end:49 pic:3' CCCTACCTTCCTGCCCTTCAC 5'& |||.||| .|| .||| |||| &5' GGGGTGG-GGG-TGGGCAGTG 3' HOXB4 hsv1-miR-H6-3p beg:58 end:80 pic:3' CCCTACCTTCCTGCCCTTCAC 5'& |||.|||..|||| |||.| &5' GGGGTGGGGGGACAGGAGG-- 3' HOXB4 hsv1-miR-H7 beg:1098 end:1111 pic:3' GGAAACCAACGTCTGGGGAAA 5'& |||.|||||| &5' ----------CAGGCCCCTT- 3' HOXB4 hsv2-miR-H10 beg:470 end:489 pic:3' GGCGGGTGGGGGCGTGGG 5'& || ||.||.|||| |.| &5' -CGGCCGCCTCCGC-CTC 3' HOXB4 hsv2-miR-H10 beg:110 end:131 pic:3' GGCGGGTGGGGGCGTGGG 5'& |.|||| ||||| |||.. &5' CTGCCCTCCCCCACACTT 3' HOXB4 hsv2-miR-H20 beg:712 end:734 pic:3' TCTTTCCCCA--GGCATTGGTTT 5'& .|||.||||| || |.|| &5' GGAAGGGGGTGGCCTTGAC---- 3' HOXB4 hsv2-miR-H22 beg:1087 end:1110 pic:3' CGGGT-GGGTGCAGGTCTGGGGA 5'& || .||| ||||.||||| &5' ---CATTCCAAAACCAGGCCCCT 3' HOXB4 hsv2-miR-H2 beg:461 end:474 pic:3' AGCGCGTACTGGGTCCGAGTCT 5'& |.||| |||||.| &5' --------GGCCC-GGCTCGG- 3' HOXB4 hsv2-miR-H22 beg:192 end:210 pic:3' CGGGTGGGTGCAGGTCTGGGGA 5'& ||||| ||.|||| &5' ------CCACGGGGAGGCCCC- 3' HOXB4 hsv2-miR-H6star beg:33 end:63 pic:3' TCCTACC-----TTCCCGTCTTCTACCC 5'& .||.||| .|| ||||..|||||| &5' GGGGTGGGCAGTGAGTGCAGGGGATGGG 3' HOXB4 hsv2-miR-H7-3p beg:746 end:767 pic:3' CTGCTCCCCAGC-CTTAGGTTT 5'& .| ||| ||.|||||. &5' -GC-AGGAAAATTGAGTCCAAG 3' HOXB4 hsv2-miR-H9-3p beg:20 end:40 pic:3' CTCCTCCTCTG-GCTCCACCCTT 5'& || | ||.||||||.. &5' ------GAACCTCGGGGTGGGGG 3' HOXB4 hsv2-miR-H9-3p beg:694 end:719 pic:3' CTCCTCCTCTGGCTCCACCCTT 5'& |||||||.|| | || ||||| &5' GAGGAGGGGAGCAAGTAGGGAA 3' HOXB4 hsv2-miR-H9-5p beg:472 end:491 pic:3' TGGCGCTGAGGTGGAGGCTC 5'& .|||| ||||.||||.| &5' GCCGC--CTCCGCCTCTG-- 3' HOXB4 kshv-miR-K12-12star beg:103 end:126 pic:3' AGTTGGTCCCGTGGGAGGGGGT 5'& ||.| .|||||||||| &5' --AATCTATCTGCCCTCCCCCA 3' HOXB4 kshv-miR-K12-2star beg:842 end:862 pic:3' GTCGAGATCGGGACCTTCTAG 5'& |||.| ||..||||.|| &5' CAGTTG-AGTTCTGGGAG--- 3' HOXB4 kshv-miR-K12-3 beg:910 end:931 pic:3' AGC-GACGGCAGGAGTCTTACACT 5'& | ||| |||||||| &5' --GACTGAAAAT----GAATGTGA 3' HOXB4 kshv-miR-K12-8star beg:60 end:83 pic:3' TCGCCCCGCAATCACTCCCTCA 5'& .|.|||| | || |||||.| &5' GGTGGGGGGACAG-GAGGGGG- 3' HOXB4 sv40-miR-S1-3p beg:732 end:752 pic:3' TGAGTCCCGTACTTTGTCCG 5'& ||||||| .|| |.|||| &5' ACTCAGGA-GTG-AGCAGG- 3' HOXB4 sv40-miR-S1-5p beg:1098 end:1111 pic:3' TTCCGAGTAAAGTCCGGGGAGT 5'& |||||||||. &5' -----------CAGGCCCCTT- 3' HOXB4 sv40-miR-S1-5p beg:887 end:908 pic:3' TTCCGAGTAAAGTC--CGGGGAGT 5'& |. || ||| |||.||| &5' ---GTACAG--CAGAAGCCTCTC- 3' HOXB4 hsa-miR-647 beg:38 end:56 pic:3' CTTCCTTCACTCACGTCGGTG 5'& .|| ||||||||||| &5' --GGGCAGTGAGTGCAG---- 3'

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region HOXB4 High_conserved miR-503 chr17:46653579 7-mer-m8 31 3pUTR HOXB4 High_conserved miR-9/9ab chr17:46657378 7-mer-m8 24 5pUTR HOXB4 High_conserved miR-135ab/135a-5p chr17:46653258 7-mer-m8 11 3pUTR HOXB4 High_conserved miR-139-5p chr17:46657278 7-mer-A1 82 5pUTR HOXB4 High_conserved miR-141/200a chr17:46653494 7-mer-m8 44 3pUTR HOXB4 High_conserved miR-141/200a chr17:46656760 7-mer-A1 0 5pUTR HOXB4 High_conserved miR-142-3p chr17:46654290 7-mer-A1 71 CDS HOXB4 High_conserved miR-143/1721/4770 chr17:46656367 7-mer-m8 60 5pUTR HOXB4 High_conserved miR-145 chr17:46657327 8-mer 53 5pUTR HOXB4 High_conserved miR-17/17-5p/20ab/20b-5p/93/106ab/427/518a-3p/519d chr17:46653952 7-mer-A1 27 3pUTR HOXB4 High_conserved miR-181abcd/4262 chr17:46653155 7-mer-m8 44 3pUTR HOXB4 High_conserved let-7/98/4458/4500 chr17:46652965 7-mer-m8 24 3pUTR HOXB4 High_conserved miR-191 chr17:46656809 7-mer-m8 33 5pUTR HOXB4 High_conserved miR-193/193b/193a-3p chr17:46653235 7-mer-m8 29 3pUTR HOXB4 High_conserved miR-193/193b/193a-3p chr17:46656214 7-mer-A1 9 5pUTR HOXB4 High_conserved miR-1ab/206/613 chr17:46652988 8-mer 62 3pUTR HOXB4 High_conserved miR-204/204b/211 chr17:46655896 7-mer-A1 0 5pUTR HOXB4 High_conserved miR-204/204b/211 chr17:46656508 7-mer-m8 13 5pUTR HOXB4 High_conserved miR-204/204b/211 chr17:46656711 7-mer-m8 0 5pUTR HOXB4 High_conserved miR-216a chr17:46656436 7-mer-m8 4 5pUTR HOXB4 High_conserved miR-216a chr17:46656702 7-mer-m8 36 5pUTR HOXB4 High_conserved miR-22/22-3p chr17:46656446 7-mer-A1 51 5pUTR HOXB4 High_conserved miR-122/122a/1352 chr17:46657204 7-mer-m8 67 5pUTR HOXB4 High_conserved miR-23abc/23b-3p chr17:46653153 8-mer 49 3pUTR HOXB4 High_conserved miR-29abcd chr17:46656183 7-mer-A1 11 5pUTR HOXB4 High_conserved miR-338/338-3p chr17:46653577 7-mer-A1 42 3pUTR HOXB4 High_conserved miR-338/338-3p chr17:46656125 7-mer-m8 20 5pUTR HOXB4 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr17:46653509 7-mer-A1 56 3pUTR HOXB4 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr17:46657429 7-mer-m8 4 5pUTR HOXB4 High_conserved miR-375 chr17:46657396 7-mer-A1 42 5pUTR HOXB4 High_conserved miR-383 chr17:46655985 7-mer-m8 18 5pUTR HOXB4 High_conserved miR-425/425-5p/489 chr17:46653023 7-mer-m8 11 3pUTR HOXB4 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr17:46656911 8-mer 20 5pUTR HOXB4 Medium_conserved miR-505/505-3p chr17:46657215 7-mer-A1 67 5pUTR HOXB4 Medium_conserved miR-543 chr17:46656979 7-mer-A1 13 5pUTR HOXB4 Medium_conserved miR-615-3p chr17:46653608 7-mer-m8 18 3pUTR HOXB4 Medium_conserved miR-615-3p chr17:46655804 8-mer 31 5pUTR HOXB4 Medium_conserved miR-758 chr17:46657244 8-mer 78 5pUTR HOXB4 Medium_conserved miR-136 chr17:46654100 7-mer-m8 11 CDS HOXB4 Medium_conserved miR-136 chr17:46657059 7-mer-A1 13 5pUTR HOXB4 Medium_conserved miR-154/872 chr17:46656209 7-mer-A1 9 5pUTR HOXB4 Medium_conserved miR-185/882/3473/4306/4644 chr17:46653008 7-mer-m8 29 3pUTR HOXB4 Medium_conserved miR-185/882/3473/4306/4644 chr17:46653173 7-mer-m8 16 3pUTR HOXB4 Medium_conserved miR-28-5p/708/1407/1653/3139 chr17:46653758 7-mer-m8 31 3pUTR HOXB4 Medium_conserved miR-320abcd/4429 chr17:46653745 7-mer-m8 42 3pUTR HOXB4 Medium_conserved miR-320abcd/4429 chr17:46653913 7-mer-A1 51 3pUTR HOXB4 Medium_conserved miR-326/330/330-5p chr17:46657412 7-mer-m8 27 5pUTR HOXB4 Medium_conserved miR-328a/328b-3p chr17:46653434 7-mer-m8 7 3pUTR HOXB4 Medium_conserved miR-328a/328b-3p chr17:46653886 7-mer-m8 11 3pUTR HOXB4 Medium_conserved miR-328a/328b-3p chr17:46657313 7-mer-A1 58 5pUTR HOXB4 Medium_conserved miR-340-5p chr17:46653949 7-mer-m8 13 3pUTR HOXB4 Medium_conserved miR-342-3p chr17:46656705 7-mer-A1 29 5pUTR HOXB4 Medium_conserved miR-370 chr17:46653332 7-mer-A1 0 3pUTR HOXB4 Medium_conserved miR-370 chr17:46654319 7-mer-m8 62 CDS HOXB4 Medium_conserved miR-376c/741-5p chr17:46655937 7-mer-A1 51 5pUTR HOXB4 Medium_conserved miR-377 chr17:46652928 8-mer 31 3pUTR HOXB4 Medium_conserved miR-378/422a/378bcdefhi chr17:46653198 8-mer 11 3pUTR HOXB4 Medium_conserved miR-379/1193-5p/3529 chr17:46655254 7-mer-m8 42 CDS HOXB4 Medium_conserved miR-384/384-3p chr17:46653144 8-mer 42 3pUTR HOXB4 Medium_conserved miR-410/344de/344b-1-3p chr17:46653948 7-mer-A1 7 3pUTR HOXB4 Medium_conserved miR-421 chr17:46656968 7-mer-A1 13 5pUTR HOXB4 Medium_conserved miR-127/127-3p chr17:46657273 7-mer-A1 78 5pUTR HOXB4 Medium_conserved miR-491-5p chr17:46653957 7-mer-A1 9 3pUTR HOXB4 Medium_conserved miR-491-5p chr17:46657033 7-mer-m8 22 5pUTR HOXB4 Medium_conserved miR-496 chr17:46656777 7-mer-m8 13 5pUTR

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score HOXB4 RAID00012728 hsa-miR-320b miRNA MIMAT0005792 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID00054354 hsa-miR-6867-5p miRNA MIMAT0027634 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID00188701 hsa-miR-320c miRNA MIMAT0005793 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID00238628 hsa-miR-4262 miRNA MIMAT0016894 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID00239601 hsa-miR-4723-5p miRNA MIMAT0019838 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID00298877 hsa-miR-185-5p miRNA MIMAT0000455 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID00560124 hsa-miR-23c miRNA MIMAT0018000 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID00575290 hsa-miR-4667-3p miRNA MIMAT0019744 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID00751461 hsa-miR-6879-5p miRNA MIMAT0027658 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID00796371 hsa-miR-708-5p miRNA MIMAT0004926 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID01058560 hsa-miR-328-5p miRNA MIMAT0026486 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01070679 hsa-let-7d-5p miRNA MIMAT0000065 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID01103738 hsa-miR-181c-5p miRNA MIMAT0000258 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID01133967 hsa-miR-340-5p miRNA MIMAT0004692 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID01150423 hsa-miR-7843-5p miRNA MIMAT0030411 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01195532 hsa-miR-6868-5p miRNA MIMAT0027636 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01345991 hsa-miR-1-3p miRNA MIMAT0000416 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6478 HOXB4 RAID01381760 hsa-miR-320a miRNA MIMAT0000510 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID01394861 hsa-miR-4447 miRNA MIMAT0018966 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01409190 hsa-miR-23b-3p miRNA MIMAT0000418 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID01537189 hsa-miR-4510 miRNA MIMAT0019047 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01579049 hsa-miR-425-5p miRNA MIMAT0003393 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01581376 hsa-miR-4419a miRNA MIMAT0018931 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01602063 hsa-miR-668-3p miRNA MIMAT0003881 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01673136 hsa-miR-182-3p miRNA MIMAT0000260 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID01700815 hsa-miR-5590-3p miRNA MIMAT0022300 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01718064 hsa-miR-6129 miRNA MIMAT0024613 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID01727620 hsa-miR-300 miRNA MIMAT0004903 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID01796527 hsa-let-7c-5p miRNA MIMAT0000064 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID01832299 hsa-miR-181b-5p miRNA MIMAT0000257 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID01866455 hsa-miR-495-3p miRNA MIMAT0002817 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID01986521 hsa-miR-6820-5p miRNA MIMAT0027540 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02063627 hsa-miR-149-5p miRNA MIMAT0000450 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID02071987 hsa-miR-4632-5p miRNA MIMAT0022977 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02078889 hsa-miR-6887-3p miRNA MIMAT0027675 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02106573 hsa-miR-5701 miRNA MIMAT0022494 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02128027 hsa-miR-4267 miRNA MIMAT0016893 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02152787 hsa-miR-7109-5p miRNA MIMAT0028115 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02211800 hsa-miR-6890-3p miRNA MIMAT0027681 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02249704 hsa-miR-422a miRNA MIMAT0001339 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID02358005 hsa-miR-181d-5p miRNA MIMAT0002821 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID02392800 hsa-miR-34c-5p miRNA MIMAT0000686 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID02424069 hsa-miR-205-5p miRNA MIMAT0000266 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID02497341 hsa-miR-4500 miRNA MIMAT0019036 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID02514746 hsa-miR-3658 miRNA MIMAT0018078 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02522726 hsa-miR-451b miRNA MIMAT0019840 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02528654 hsa-let-7b-5p miRNA MIMAT0000063 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID02574757 hsa-miR-23a-3p miRNA MIMAT0000078 HOXB4 mRNA 3214 Western Blot//Reporter Assay//CLIP-seq//Prediction 0.9560 HOXB4 RAID02589539 hsa-miR-181a-5p miRNA MIMAT0000256 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID02593309 hsa-miR-494-3p miRNA MIMAT0002816 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02629810 hsa-miR-6735-5p miRNA MIMAT0027371 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02760085 hsa-miR-3126-3p miRNA MIMAT0015377 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02784987 hsa-miR-613 miRNA MIMAT0003281 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6478 HOXB4 RAID02789628 hsa-miR-6885-5p miRNA MIMAT0027670 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02799948 hsa-miR-374a-5p miRNA MIMAT0000727 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02802353 hsa-miR-136-5p miRNA MIMAT0000448 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID02804309 hsa-miR-1275 miRNA MIMAT0005929 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02847226 hsa-miR-4306 miRNA MIMAT0016858 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02912910 hsa-miR-328-3p miRNA MIMAT0000752 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID02925292 hsa-miR-384 miRNA MIMAT0001075 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID02936014 hsa-miR-4472 miRNA MIMAT0018999 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID02941636 hsa-miR-6130 miRNA MIMAT0024614 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03028823 hsa-miR-28-5p miRNA MIMAT0000085 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID03104964 hsa-miR-202-3p miRNA MIMAT0002811 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID03116551 hsa-miR-6131 miRNA MIMAT0024615 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03139315 hsa-miR-127-3p miRNA MIMAT0000446 HOXB4 mRNA 3214 CLIP-seq 0.5483 HOXB4 RAID03225377 hsa-miR-374b-5p miRNA MIMAT0004955 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03270869 hsa-let-7a-5p miRNA MIMAT0000062 HOXB4 mRNA 3214 CLIP-seq//CLASH 0.6606 HOXB4 RAID03335105 hsa-miR-200a-3p miRNA MIMAT0000682 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03342757 hsa-miR-4436b-3p miRNA MIMAT0019941 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03442153 hsa-miR-543 miRNA MIMAT0004954 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID03457155 hsa-miR-132-5p miRNA MIMAT0004594 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03477070 hsa-miR-6133 miRNA MIMAT0024617 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03523200 hsa-miR-320d miRNA MIMAT0006764 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID03600851 hsa-miR-206 miRNA MIMAT0000462 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6478 HOXB4 RAID03620797 hsa-miR-6127 miRNA MIMAT0024610 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03697642 hsa-miR-377-3p miRNA MIMAT0000730 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03702439 hsa-miR-4530 miRNA MIMAT0019069 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03744751 hsa-miR-141-3p miRNA MIMAT0000432 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03772089 hsa-miR-142-5p miRNA MIMAT0000433 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03890876 hsa-miR-3613-3p miRNA MIMAT0017991 HOXB4 mRNA 3214 Prediction 0.1828 HOXB4 RAID03939740 hsa-miR-4429 miRNA MIMAT0018944 HOXB4 mRNA 3214 CLIP-seq//Prediction 0.6308 HOXB4 RAID04307355 FENDRR lncRNA 400550 HOXB4 protein 3214 Microarray//RNA-seq 0.6606 HOXB4 RAID05267372 TUG1 lncRNA 55000 HOXB4 protein 3214 Microarray//RNA-seq 0.6606