DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome UBL5 3'UTR ae2e38b9bf BA116393 NM_001048241 chr19:9801685-9801797:+ UBL5 3'UTR 9555873e05 BA116394 NM_001048241 chr19:9801685-9801797:+ UBL5 5'UTR ae2e38b9bf CA182600 NM_001048241 chr19:9799568-9800013:+ UBL5 5'UTR 9555873e05 CA182601 NM_001048241 chr19:9799568-9800013:+

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0049166 chr19 9939512 9940797 + hsa_circ_0049161 chr19 9938567 9939550 + hsa_circ_0049165 chr19 9939267 9940797 + hsa_circ_0049162 chr19 9939002 9939550 + hsa_circ_0049164 chr19 9939267 9939550 + hsa_circ_0049163 chr19 9939002 9940797 + hsa_circ_0049160 chr19 9938555 9940797 +

DNA & RNA Element - circRNADb circRNA ID Chrom Start End Strand Samples hsa_circ_18467 chr19 9939267 9939550 + normal brain tissue hsa_circ_19424 chr19 9939002 9939351 + glioblastoma

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-UBL5.10 NM_001048241Tchr19:9939267-9939550 expressed UBL5 59286 protein-coding + hsa_circ_0049164 hsa-circ-UBL5.11 NM_001048241Tchr19:9938555-9940797 none UBL5 59286 protein-coding + hsa_circ_0049160 hsa-circ-UBL5.12 NM_001048241Tchr19:9939512-9940797 expressed UBL5 59286 protein-coding + hsa_circ_0049166 hsa-circ-UBL5.13 NM_001048241Tchr19:9939002-9940797 none UBL5 59286 protein-coding + hsa_circ_0049163 hsa-circ-UBL5.14 NM_001048241Tchr19:9939267-9940797 none UBL5 59286 protein-coding + hsa_circ_0049165 hsa-circ-UBL5.6 NM_024292Tchr19:9939002-9939550 none UBL5 59286 protein-coding + hsa_circ_0049162 hsa-circ-UBL5.9 NM_024292Tchr19:9938567-9939550 expressed UBL5 59286 protein-coding + hsa_circ_0049161

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT031343 hsa-miR-18a-5p Homo sapiens UBL5 59286 Homo sapiens Sequencing Functional MTI (Weak) 20371350 MIRT037335 hsa-miR-877-5p Homo sapiens UBL5 59286 Homo sapiens CLASH Functional MTI (Weak) 23622248 MIRT043187 hsa-miR-324-5p Homo sapiens UBL5 59286 Homo sapiens CLASH Functional MTI (Weak) 23622248

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004550 hsa-miR-30c-2* 59286 UBL5 ucucauuugucGGAAGAGGGUc :| ||||||| cugccccgcuuUCCUCUCCCAu 2 12 19 40 [hg19:19:9940703-9940724:+] 0.4915 143 7 -14.45 -0.1436 MIMAT0004674 hsa-miR-30c-1* 59286 UBL5 ccucauuuguuGGGAGAGGGUc :||||||||| cugccccgcuuUCCUCUCCCAu 2 12 19 40 [hg19:19:9940703-9940724:+] 0.4915 151 7 -20.64 -0.1436 MIMAT0000751 hsa-miR-330-3p 59286 UBL5 agagacgucCGGCACACGAAACg | :|| ||||||| aaagacuuaGAUGU-UGCUUUGu 2 15 92 113 [hg19:19:9940776-9940797:+] 0.6302 144 7 -14.37 -1.2817 MIMAT0004762 hsa-miR-486-3p 59286 UBL5 uaGGACAUGACUCGACGGGGc ||| || ||||||| auCCUCAUCU-UCCUGCCCCg 2 20 7 26 [hg19:19:9940691-9940710:+] 0.4915 141 7 -25.33 -0.3864 MIMAT0002808 hsa-miR-511 59286 UBL5 acugacgucucguUUUCUGug |||||| aacucaccuuaauAAAGACuu 3 9 79 99 [hg19:19:9940763-9940783:+] 0.6302 120 0 -6.56 -0.2400 MIMAT0002849 hsa-miR-524-5p 59286 UBL5 cuCUUUC-ACGAAGGGAAACAUc || || ||||| |||||| ggGAUAGAUGCUU--GUUUGUAa 2 21 57 77 [hg19:19:9940741-9940761:+] 0.6360 128 6 -13.05 -0.1918 MIMAT0002849 hsa-miR-524-5p 59286 UBL5 cucuuucacgaAGGGAAACAuc |: |||||| agacuuagaugUUGCUUUGU-- 3 12 94 113 [hg19:19:9940778-9940797:+] 0.6302 123 0 -8.86 -0.2416 MIMAT0002855 hsa-miR-520d-5p 59286 UBL5 cuuucccgaAGGGAAACAuc |: |||||| acuuagaugUUGCUUUGU-- 3 12 96 113 [hg19:19:9940780-9940797:+] 0.6245 123 0 -7.92 -0.2346 MIMAT0002855 hsa-miR-520d-5p 59286 UBL5 cuuucccgaagggAAACAUc |||||| ggauagaugcuugUUUGUAa 2 8 58 77 [hg19:19:9940742-9940761:+] 0.6360 120 6 -7.86 -0.2100 MIMAT0005791 hsa-miR-1264 59286 UBL5 uuguccacGAGUUUAUUCUGAAc ||:|| ||||||| aaacucacCUUAAUAAAGACUUa 2 16 78 100 [hg19:19:9940762-9940784:+] 0.6302 155 7 -10.72 -1.2911 MIMAT0004901 hsa-miR-298 59286 UBL5 accCUCUUGGAGGGACGAA-GACGa |||||:| |:| ||| |||| -auGAGAAUC-CUCAUCUUCCUGCc 2 22 1 23 [hg19:19:9940685-9940707:+] 0.5444 131 0 -19.87 -0.4054 MIMAT0004925 hsa-miR-876-3p 59286 UBL5 acuuAAUGAAACA--UUUG-GUGGu ||: ||||| |||| |||| augcUUG-UUUGUAAAAACUCACCu 2 19 64 87 [hg19:19:9940748-9940771:+] 0.6360 123 0 -12.90 -1.2419 MIMAT0004945 hsa-miR-744 59286 UBL5 acGACAAUCGGGAUCGGGGCGu || | :||| ||||||| ucCUCAUCUUCCU-GCCCCGCu 2 21 8 28 [hg19:19:9940692-9940712:+] 0.4915 150 7 -21.97 -0.6224 MIMAT0004974 hsa-miR-924 59286 UBL5 cguucUGUAGU--GUUCUGAGa || |:| ||||||: aacucACCUUAAUAAAGACUUa 2 16 79 100 [hg19:19:9940763-9940784:+] 0.6302 126 0 -8.70 -0.2080 MIMAT0005906 hsa-miR-1255a 59286 UBL5 uuAGAUGA-AAGAAACGAGUAGGa |:| || | | | ||||||| gcUUUCCUCUCCCAUCCUCAUCCc 2 22 26 49 [hg19:19:9940710-9940733:+] 0.6360 152 7 -13.59 -0.2329 MIMAT0005929 hsa-miR-1275 59286 UBL5 cuGUCGGAG-AGGGGGUg || |||| ||||||| ccCAUCCUCAUCCCCCAc 2 16 36 53 [hg19:19:9940720-9940737:+] 0.6360 158 7 -26.31 -0.4328 MIMAT0005945 hsa-miR-1255b 59286 UBL5 uuGGUGAAAGAA------ACGAGUAGGc ||:||||| | | ||||||| ccCCGCUUUCCUCUCCCAUCCUCAUCCc 2 21 22 49 [hg19:19:9940706-9940733:+] 0.4915 151 7 -19.22 -0.1056 MIMAT0014988 hsa-miR-3125 59286 UBL5 agaGA-GGUGUCGAAGGAGAu || || |: :||||||| uucCUGCCCCGCUUUCCUCUc 2 18 16 36 [hg19:19:9940700-9940720:+] 0.4915 152 7 -17.22 -0.2715 MIMAT0015051 hsa-miR-3174 59286 UBL5 ccgaGACGUAGA-GAUUGAGUGau :||: | | ||||||| augcUUGUUUGUAAAAACUCACcu 3 20 64 87 [hg19:19:9940748-9940771:+] 0.6360 126 0 -12.29 -0.2129 MIMAT0016855 hsa-miR-4302 59286 UBL5 gagcgacucGGUGUGACc |||||||| ccucaucccCCACACUGg 2 10 41 58 [hg19:19:9940725-9940742:+] 0.6360 145 7 -20.44 -0.1722 MIMAT0016871 hsa-miR-4320 59286 UBL5 uccuucgaugUCUUAGGg ||||||| -------augAGAAUCCu 2 9 1 11 [hg19:19:9940685-9940695:+] 0.5444 140 7 -10.10 -0.5197 MIMAT0016926 hsa-miR-4328 59286 UBL5 uuaGGACCCUUUUGAcc ::|| |||||| uugUUUGUAAAAACUca 3 15 68 84 [hg19:19:9940752-9940768:+] 0.6360 126 0 -5.54 -0.1350 MIMAT0000072 hsa-miR-18a 59286 UBL5 gaUAGACGUGAUCUACGUGGAAu :|:||:| | | |||||| uuGUUUGUA-AAAACUCACCUUa 2 22 68 89 [hg19:19:9940752-9940773:+] 0.6360 123 6 -17.08 -0.4485 MIMAT0000231 hsa-miR-199a-5p 59286 UBL5 cuuguccaucagacuUGUGACCc ||||||| ccauccucaucccccACACUGGg 2 9 37 59 [hg19:19:9940721-9940743:+] 0.6360 140 7 -17.01 -0.1012 MIMAT0000263 hsa-miR-199b-5p 59286 UBL5 cuugucuaucagauuUGUGACCc ||||||| ccauccucaucccccACACUGGg 2 9 37 59 [hg19:19:9940721-9940743:+] 0.6360 140 7 -15.40 -0.1012 MIMAT0004602 hsa-miR-125a-3p 59286 UBL5 ccGAGGGUUCUUGGAGUGGAca :|: :|| || ||||||| ugUUUGUAA-AAACUCACCUua 3 21 69 89 [hg19:19:9940753-9940773:+] 0.6360 138 0 -15.14 -0.4084 MIMAT0001412 hsa-miR-18b 59286 UBL5 gauugacgugaucuacGUGGAAu |||||| cuuguuuguaaaaacuCACCUUa 2 8 67 89 [hg19:19:9940751-9940773:+] 0.6360 120 6 -13.79 -0.4485 MIMAT0002817 hsa-miR-495 59286 UBL5 uuCUUCACGUGGUACAAACAaa |:| | | ||||||| ugGGAUAGAUGCUUGUUUGUaa 3 21 56 77 [hg19:19:9940740-9940761:+] 0.6360 128 0 -11.35 -0.1819

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G048566 UBL5 Homo sapiens 59286

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile UBL5 hsa-miR-1264 beg:83 end:100 pic:3' TTGTCCACGAGTTTATTCTGAAC 5'& ||.|| ||||||| &5' --------CTTAATAAAGACTT- 3' UBL5 hsa-miR-199b-5p beg:49 end:60 pic:3' CTTGTCTATCAGATTTGTGACCC 5'& |||||||| &5' ---------------ACACTGGG 3' UBL5 hsa-miR-4320 beg:1 end:12 pic:3' TCCTTCGATGTCTTAGGG 5'& |||||||. &5' ----------AGAATCCT 3' UBL5 hsa-miR-4302 beg:39 end:59 pic:3' GAGCGACTCGGTGTGACC 5'& ||| ||||||||| &5' CTCATCCC-CCACACTGG 3' UBL5 ebv-miR-BART3star beg:49 end:60 pic:3' TCGTGTTGTGATTGTGATCCA 5'& |||||.|| &5' ------------ACACTGGG- 3' UBL5 hcmv-miR-UL70-3p beg:21 end:45 pic:3' GGCGCGCGGTC-GGGTAGGGG 5'& |||| || |||||||.| &5' CCGCTTTCCTCTCCCATCCTC 3' UBL5 hsa-miR-103 beg:91 end:110 pic:3' AGTATCGGGACATGTTACGACGA 5'& || |.| .|||.|||| &5' ----AGACTTA---GATGTTGCT 3' UBL5 hsa-miR-107 beg:91 end:110 pic:3' ACTATCGGGACATGTTACGACGA 5'& || |.| .|||.|||| &5' ----AGACTTA---GATGTTGCT 3' UBL5 hsa-miR-1182 beg:22 end:45 pic:3' CAGTGT-AGG-GAGGGTTCTGGGAG 5'& |.| ||| |||||| .|||| &5' --CGCTTTCCTCTCCCA---TCCTC 3' UBL5 hsa-miR-1255a beg:21 end:49 pic:3' TTAGATGAAAGAAAC------GAGTAGGA 5'& | ||||| ||||||| &5' ---CCGCTTTCCTCTCCCATCCTCATCC- 3' UBL5 hsa-miR-1255b beg:28 end:49 pic:3' TTGGTGAAAGAAACGAGTAGGC 5'& || || ||||||| &5' --CCTCTCCCATC-CTCATCC- 3' UBL5 hsa-miR-1275 beg:35 end:54 pic:3' CTGTCGGAG-AGGGGGTG 5'& || |||| |||||||| &5' --CATCCTCATCCCCCAC 3' UBL5 hsa-miR-1299 beg:43 end:65 pic:3' AGGGAGTGTGTCTTAAGGTCTT 5'& |||| ||||| |.. .||| &5' TCCCCCACACTGGGA--TAGA- 3' UBL5 hsa-miR-18a beg:67 end:90 pic:3' GATAGACGTGATCTACGTGGAAT 5'& |.|.||.| ||||||| &5' -TGTTTGTAAAAACT-CACCTTA 3' UBL5 hsa-miR-1908 beg:8 end:29 pic:3' CTGGTT--AGCGGCAGGGGCGGC 5'& .|| || |.| ||||||. &5' --TCATCTTC-CTG-CCCCGCT- 3' UBL5 hsa-miR-2861 beg:16 end:35 pic:3' GGCGGGTGGCGGTCCGGGG 5'& |.||| ||||. ||.| &5' CTGCC--CCGCTTT-CCTC 3' UBL5 hsa-miR-30c-2star beg:23 end:40 pic:3' TCTCATTTGTCGGA---AGAGGGTC 5'& ||.| ||||||| &5' ----------GCTTTCCTCTCCCA- 3' UBL5 hsa-miR-3141 beg:11 end:32 pic:3' AGGAGGAGGTGGGCGGGAG 5'& ||.|||| | |||||..|| &5' TCTTCCTGC-CCCGCTTTC 3' UBL5 hsa-miR-3141 beg:25 end:45 pic:3' AGGAGGAGGTGGGCGGGAG 5'& ..|||||. ||| |||| &5' -TTTCCTCT-CCCATCCTC 3' UBL5 hsa-miR-3153 beg:13 end:35 pic:3' TTTACAGGGATGA-GCGAAAGGGG 5'& |.|||.| ||||||||.| &5' -----TTCCTGCCCCGCTTTCCTC 3' UBL5 hsa-miR-330-3p beg:94 end:112 pic:3' AGAGACGTCCGGCACACGAAACG 5'& || .|| .|| |||||||. &5' ---CT-TAGA-TGT-TGCTTTGT 3' UBL5 hsa-miR-4257 beg:39 end:59 pic:3' GAGTCAGGGGTGGAGACC 5'& |||| |||||| |||| &5' CTCATCCCCCACA-CTGG 3' UBL5 hsa-miR-4271 beg:21 end:39 pic:3' GGGGTGGAAAAGAAGGGGG 5'& ||||.|. ||| ||.||| &5' CCCCGCT--TTCCTCTCCC 3' UBL5 hsa-miR-4298 beg:16 end:40 pic:3' GACGGAGGA-GGAGGACAGGGTC 5'& ||||| || ..|||| ||||| &5' CTGCC-CCGCTTTCCTCTCCCA- 3' UBL5 hsa-miR-4314 beg:16 end:34 pic:3' GACAGGGT-AAAGGGTCTC 5'& ||| |||. |||||. &5' CTGCCCCGCTTTCCT---- 3' UBL5 hsa-miR-4325 beg:50 end:68 pic:3' AGTGACTCTGTTCACGTT 5'& |||||.||.|. ||| &5' -CACTGGGATAGATGC-- 3' UBL5 hsa-miR-486-3p beg:4 end:27 pic:3' TAGGACATGACTCGACGGGGC 5'& ||||| || |||||||| &5' ATCCTCATCTTC-CTGCCCCG 3' UBL5 hsa-miR-490-5p beg:46 end:67 pic:3' TGGGTG-GACCTCTAGGTACC 5'& ||||| |||| ||| ||| &5' -CCCACACTGG-GATAGATG- 3' UBL5 hsa-miR-632 beg:46 end:68 pic:3' AGGGTGT--CCTTCGTCTGTG 5'& |||||| ||.| .|||..| &5' -CCCACACTGGGA-TAGATGC 3' UBL5 hsa-miR-877 beg:15 end:36 pic:3' GGGACGCGGT-AGAGGAGATG 5'& ||||| ||. |.|||||| &5' -CCTGCCCCGCTTTCCTCT-- 3' UBL5 hsv1-miR-H1 beg:21 end:42 pic:3' AGGTGAAGGGCAGGAAGGTAG 5'& ||.|||.|| ||. ||||| &5' -CCGCTTTCC-TCTC-CCATC 3' UBL5 hsv2-miR-H6 beg:23 end:43 pic:3' CGT-AGGGGAGCGGAAGGTAA 5'& || |||.||| || ||| &5' GCTTTCCTCTC-CCATCC--- 3' UBL5 kshv-miR-K12-12star beg:16 end:40 pic:3' AGTTGGTCCCGT-GGGAGGGGGT 5'& | .|| || .||||.|||| &5' -CTGCCCC-GCTTTCCTCTCCCA 3'

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region UBL5 High_conserved miR-18ab/4735-3p chr19:9940773 7-mer-A1 16 3pUTR UBL5 High_conserved miR-199ab-5p chr19:9940743 7-mer-m8 33 3pUTR UBL5 High_conserved miR-33ab/33-5p chr19:9939069 7-mer-A1 31 CDS UBL5 Medium_conserved miR-504/4725-5p chr19:9938726 7-mer-m8 13 5pUTR UBL5 Medium_conserved miR-615-3p chr19:9938688 8-mer 11 5pUTR UBL5 Medium_conserved miR-876-5p/3167 chr19:9940650 8-mer 73 CDS UBL5 Medium_conserved miR-320abcd/4429 chr19:9940674 7-mer-A1 53 CDS UBL5 Medium_conserved miR-376abd/376b-3p chr19:9940645 7-mer-A1 53 CDS UBL5 Medium_conserved miR-491-5p chr19:9940738 7-mer-A1 22 3pUTR

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score UBL5 RAID00013993 ebv-miR-BART5-5p miRNA MIMAT0003413 UBL5 mRNA 59286 PAR-CLIP 0.5483 UBL5 RAID00653290 hsa-miR-1275 miRNA MIMAT0005929 UBL5 mRNA 59286 Prediction 0.1828 UBL5 RAID00738911 hsa-miR-4472 miRNA MIMAT0018999 UBL5 mRNA 59286 Prediction 0.1828 UBL5 RAID01479703 hsa-miR-199b-5p miRNA MIMAT0000263 UBL5 mRNA 59286 CLIP-seq//Prediction 0.6308 UBL5 RAID01496567 hsa-miR-6731-5p miRNA MIMAT0027363 UBL5 mRNA 59286 Prediction 0.1828 UBL5 RAID01567364 hsa-miR-125a-3p miRNA MIMAT0004602 UBL5 mRNA 59286 CLIP-seq//Prediction 0.6308 UBL5 RAID01608250 hsa-miR-5010-5p miRNA MIMAT0021043 UBL5 mRNA 59286 Prediction 0.1828 UBL5 RAID01720488 hsa-miR-8085 miRNA MIMAT0031012 UBL5 mRNA 59286 Prediction 0.1828 UBL5 RAID01791610 hsa-miR-199a-5p miRNA MIMAT0000231 UBL5 mRNA 59286 CLIP-seq//Prediction 0.6308 UBL5 RAID02783771 hsa-miR-324-5p miRNA MIMAT0000761 UBL5 mRNA 59286 CLASH 0.5483 UBL5 RAID03280026 hsa-miR-4447 miRNA MIMAT0018966 UBL5 mRNA 59286 Prediction 0.1828 UBL5 RAID03381542 hsa-miR-18a-5p miRNA MIMAT0000072 UBL5 mRNA 59286 NGS (Next Generation Sequencing)//CLIP-seq//Prediction 0.7226 UBL5 RAID03713406 hsa-miR-4525 miRNA MIMAT0019064 UBL5 mRNA 59286 Prediction 0.1828 UBL5 RAID03740109 hsa-miR-744-5p miRNA MIMAT0004945 UBL5 mRNA 59286 Prediction 0.1828 UBL5 RAID03743866 hsa-miR-495-3p miRNA MIMAT0002817 UBL5 mRNA 59286 CLIP-seq//Prediction 0.6308 UBL5 RAID03912359 hsa-miR-6721-5p miRNA MIMAT0025852 UBL5 mRNA 59286 Prediction 0.1828 UBL5 RAID03924301 hsa-miR-18b-5p miRNA MIMAT0001412 UBL5 mRNA 59286 CLIP-seq//Prediction 0.6308 UBL5 RAID04025072 hsa-miR-877-5p miRNA MIMAT0004949 UBL5 mRNA 59286 CLASH 0.5483