| DNA & RNA Element - RepTar |
| Gene Name | miRNA | Begin | End | Profile |
|---|
| RNF39 | hsa-miR-129-3p | beg:387 | end:404 | pic:3' TACGAAAAACCCCATTCCCGAA 5'& ||| ||||||| &5' --GCTCCAG-----AAGGGCT- 3' |
| RNF39 | hsa-miR-129star | beg:394 | end:404 | pic:3' TATGAAAAACCCCATTCCCGAA 5'& ||||||| &5' --------------AAGGGCT- 3' |
| RNF39 | hsa-miR-1294 | beg:138 | end:157 | pic:3' TCTGTTGTTACGGTTGGAGTGT 5'& ||.|||| .||||||| &5' ----AATAATGA-GACCTCAC- 3' |
| RNF39 | hsa-miR-646 | beg:34 | end:52 | pic:3' CGGAGTCTCCGTCGACGAA 5'& ||| | |||||||||| &5' GCC-CT---GCAGCTGCTT 3' |
| RNF39 | hsa-miR-1233 | beg:387 | end:406 | pic:3' GACGCCCTCCTGTCCCGAGT 5'& || || |||||||| &5' --GCTCCAGA--AGGGCTCA 3' |
| RNF39 | hsa-miR-1270 | beg:695 | end:713 | pic:3' TGTGTCGAGAAGGTA-TAGAGGTC 5'& |||| ||||||| &5' --------CTTCAGACATCTCCA- 3' |
| RNF39 | hsa-miR-620 | beg:703 | end:713 | pic:3' TAAAGATATAGATAGAGGTA 5'& ||||||| &5' ------------ATCTCCA- 3' |
| RNF39 | bkv-miR-B1-5p | beg:200 | end:221 | pic:3' TACGAGAAGGGTTC-AGAGTCTA 5'& ||| ||||. .| ||||||| &5' -TGC-CTTCT--GGCTCTCAGA- 3' |
| RNF39 | hsa-miR-377star | beg:555 | end:572 | pic:3' CTTAAGTGGTTCCCGTTGGAGA 5'& |.||| || ||||||| &5' -AGTTC-CC-----CAACCTC- 3' |
| RNF39 | hsa-miR-1291 | beg:397 | end:411 | pic:3' TGACGACCAGAAGTC-AGTCCCGGT 5'& .| |||||||| &5' -------------GGCTCAGGGCC- 3' |
| RNF39 | hsa-miR-1278 | beg:235 | end:252 | pic:3' TATCTACTATACG----TGTCATGAT 5'& || |||||||| &5' -----------GCTACTACAGTACT- 3' |
| RNF39 | hsa-miR-429 | beg:304 | end:318 | pic:3' TGCCAAAATGGTCTGTCATAAT 5'& ||| |||||||. &5' ---------CCAT-CAGTATTG 3' |
| RNF39 | hsa-miR-1257 | beg:79 | end:95 | pic:3' CCAGTCTTGGGTAGTAAGTGA 5'& .|||| ||||||| &5' ----GGAACA---CATTCAC- 3' |
| RNF39 | hsa-miR-106astar | beg:94 | end:108 | pic:3' CATTCTTCACGAATGTAACGTC 5'& || |||||||| &5' ---------GCC--CATTGCAG 3' |
| RNF39 | ebv-miR-BART15 | beg:445 | end:455 | pic:3' AGTTCCTTTGTTTTGGTGACTG 5'& ||||||| &5' --------------CCACTGA- 3' |
| RNF39 | hsa-miR-1207-5p | beg:427 | end:445 | pic:3' GGGGAGGGTCGGAGGGACGGT 5'& |. .||. ||||||| &5' -----CTGGGCTACCCTGCC- 3' |
| RNF39 | hsa-miR-4266 | beg:561 | end:575 | pic:3' CCGGTTCCGGAGGATC 5'& |||| ||||||| &5' --CCAA--CCTCCTA- 3' |
| RNF39 | hsa-miR-940 | beg:197 | end:208 | pic:3' CCCCTCGCCCCCGGGACGGAA 5'& .|||||||| &5' ------------TCCTGCCTT 3' |
| RNF39 | hsa-miR-940 | beg:429 | end:446 | pic:3' CCCCTCGCCCCC-GGGACGGAA 5'& ||| |||||||| &5' -------GGGCTACCCTGCCT- 3' |
| RNF39 | hsa-miR-125a-5p | beg:393 | end:409 | pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& .||||| ||||||| &5' ---------GAAGGG-CTCAGGG- 3' |
| RNF39 | hsa-miR-125b | beg:395 | end:409 | pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& |||| ||||||| &5' ---------AGGG-CTCAGGG- 3' |
| RNF39 | hsa-miR-4319 | beg:398 | end:409 | pic:3' CACCGAAACGAGTCCCT 5'& |||||||| &5' --------GCTCAGGG- 3' |
| RNF39 | hsa-miR-1255a | beg:704 | end:723 | pic:3' TTAGATGAAAGAAAC--GAGTAGGA 5'& ||| |||||||| &5' ---------TCTCCAAACTCATCCT 3' |
| RNF39 | hsa-miR-520d-5p | beg:504 | end:520 | pic:3' CTTTCCCGAAGGGAAACATC 5'& ||| ||||||| &5' ----GGGAAG--CTTTGTA- 3' |
| RNF39 | ebv-miR-BART1-3p | beg:648 | end:667 | pic:3' CTGTATCACCTATC--GCCACGAT 5'& ||| .||||||| &5' --------GGAACCAATGGTGCTA 3' |
| RNF39 | ebv-miR-BART15 | beg:639 | end:662 | pic:3' AGTTCCTTTGTTTTGGTGACTG 5'& ||| ||||| ..||||| ||. &5' TCACGGAAA-GGAACCAATGG- 3' |
| RNF39 | ebv-miR-BART5star | beg:288 | end:304 | pic:3' TCCACTTGTCGCCGGGTG 5'& .|| ||||| ||||| &5' GGG-GAACA--GGCCC-- 3' |
| RNF39 | ebv-miR-BART6-5p | beg:582 | end:601 | pic:3' GGATACCTAACCTGGTTGGAAT 5'& ||||| ||.|||| &5' -CTATGCTCA----CAGCCTT- 3' |
| RNF39 | hsa-miR-4274 | beg:573 | end:583 | pic:3' GTCCCCCTCCCTGACGAC 5'& ||||||| &5' ----------GACTGCT- 3' |
| RNF39 | hsa-let-7b | beg:676 | end:703 | pic:3' TTGGTGT-GTTGGATG---ATGGAGT 5'& || | ||||||. |||.||| &5' --CCTCCTCAACCTGGGAATACTTCA 3' |
| RNF39 | hsa-let-7c | beg:684 | end:703 | pic:3' TTGGTATGTTGGATG---ATGGAGT 5'& ||||||. |||.||| &5' -------CAACCTGGGAATACTTCA 3' |
| RNF39 | hsa-let-7e | beg:185 | end:208 | pic:3' TTGATATGTTGG--------AGGATGGAGT 5'& |||| ||||.|||. &5' --------AACCAAATCCATTCCTGCCTT- 3' |
| RNF39 | hsa-miR-103-2star | beg:494 | end:515 | pic:3' GTTCCGTCGTGACATTTCTTCGA 5'& | || || ..|||||| &5' ----GTGGCCCTCT-GGGAAGCT 3' |
| RNF39 | hsa-miR-1183 | beg:219 | end:249 | pic:3' ACGGGTGAGAGTGGTAG-TG--GATGTCAC 5'& .|. ||||| || .| ||||||| &5' --TCTTCTCTCCCCTACAGCTACTACAGT- 3' |
| RNF39 | hsa-miR-1200 | beg:387 | end:409 | pic:3' CTCCGA-GTCTTACCGAGTCCTC 5'& ||| ||||| ||||||||. &5' ---GCTCCAGAAGGGCTCAGGG- 3' |
| RNF39 | hsa-miR-1202 | beg:223 | end:246 | pic:3' GAGGGGGTGACGTCGACCGTG 5'& |||.||| || ||||| .|| &5' CTCTCCC-CTACAGCTACTAC 3' |
| RNF39 | hsa-miR-1202 | beg:301 | end:322 | pic:3' GAGGGGGTGACGTCGACCGTG 5'& |||||| |.| .|||.| &5' CTCCCCATCAGTA-TTGGTA- 3' |
| RNF39 | hsa-miR-1205 | beg:26 | end:46 | pic:3' GAGTTTCGT---TTGGGACGTCT 5'& .|| ..|||||||| &5' -----GGCCACTGGCCCTGCAG- 3' |
| RNF39 | hsa-miR-1207-5p | beg:164 | end:185 | pic:3' GGGGAGGGTCGGAGGGACGGT 5'& | .|.||| | |||||||. &5' -CGTTTCCA-CGTCCCTGCT- 3' |
| RNF39 | hsa-miR-1207-5p | beg:667 | end:690 | pic:3' GGGGAGGGTCGGAGGGAC-GGT 5'& ||||||.| |||||. || &5' CCCCTCTCT-CCTCCTCAACC- 3' |
| RNF39 | hsa-miR-1224-3p | beg:524 | end:547 | pic:3' GAC-TCCTCTCTCCTCCACCCC 5'& || |||| ||.||||||| &5' -TGCAGGATCT-GGGGGTGGGG 3' |
| RNF39 | hsa-miR-1224-5p | beg:667 | end:687 | pic:3' GGTGGAGGGCTCAGGAGTG 5'& || ||||.| |||||| &5' CC-CCTCTCTCCTCCTCA- 3' |
| RNF39 | hsa-miR-1225-3p | beg:387 | end:406 | pic:3' GACCCCCGCCGTGTCCCCGAGT 5'& || || | ||||||| &5' ------GCTCCAGAAGGGCTCA 3' |
| RNF39 | hsa-miR-1226star | beg:197 | end:219 | pic:3' GGGGTAGGTCCGGACGTACGGGAGTG 5'& ||| |||| ||.|||| &5' -----TCCT-GCCTTCTGGCTCTCA- 3' |
| RNF39 | hsa-miR-1227 | beg:532 | end:553 | pic:3' GACCCCTTTTCCCACCGTGC 5'& ||||||. .||| || || &5' CTGGGGGT-GGGGAGGGAC- 3' |
| RNF39 | hsa-miR-1228star | beg:431 | end:452 | pic:3' GTG-TGTGGACGGGGGCGGGTG 5'& .| || ||||||. |.|||| &5' -GCTAC-CCTGCCT--GTCCAC 3' |
| RNF39 | hsa-miR-1244 | beg:222 | end:244 | pic:3' TTGGTAGAGTATGTTTGGTTGATGAA 5'& |||| ||.||||| &5' -----TCTCTCCCCTA-CAGCTACT- 3' |
| RNF39 | hsa-miR-1246 | beg:179 | end:201 | pic:3' GGACGAGGTT---TTTAGGTAA 5'& |||||| ||||||||| &5' -CTGCTCAAAACCAAATCCATT 3' |
| RNF39 | hsa-miR-1246 | beg:206 | end:225 | pic:3' GGA-CGAGGTTTTTAGGTAA 5'& || ||||. |.||||. &5' -CTGGCTCTCAGAATCT--- 3' |
| RNF39 | hsa-miR-1255b | beg:702 | end:722 | pic:3' TTGGTGAAAGAAACGAGTAGGC 5'& ||. || ||||||| &5' ---CATC-TCCAAACTCATCC- 3' |
| RNF39 | hsa-miR-1258 | beg:239 | end:260 | pic:3' AAGGTGCTGGATTAGGATTGA 5'& |.|| . ||||.||| &5' --CTACAGTACT-TCCTGACT 3' |
| RNF39 | hsa-miR-125a-3p | beg:144 | end:160 | pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& .|| |||||||||| &5' -------GAG-ACCTCACCTG- 3' |
| RNF39 | hsa-miR-125a-3p | beg:208 | end:230 | pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& |||||.| ||||.||. || &5' GGCTCTC-AGAATCTTCTCT-- 3' |
| RNF39 | hsa-miR-1260 | beg:528 | end:547 | pic:3' ACCACCG---TCTCCACCCTA 5'& || .|.||||||. &5' ----GGATCTGGGGGTGGGG- 3' |
| RNF39 | hsa-miR-1265 | beg:112 | end:133 | pic:3' TTGTTGTGAACTGGTGTAGGAC 5'& ||.|.|| ||||||..| &5' AATAGCAAC---CCACATTTT- 3' |
| RNF39 | hsa-miR-1270 | beg:0 | end:13 | pic:3' TGTGTCGAGAAGGTATAGAGGTC 5'& ||. .|||||| &5' ----------TCTC-GTCTCCA- 3' |
| RNF39 | hsa-miR-1275 | beg:214 | end:237 | pic:3' CTGTC-----GGAGAGGGGGTG 5'& ||| .||||||||.|| &5' --CAGAATCTTCTCTCCCCTAC 3' |
| RNF39 | hsa-miR-1276 | beg:3 | end:24 | pic:3' ACAGAGGT--GTCC-CGAGAAAT 5'& ||||||| .|| |.|. &5' -GTCTCCAACTAGAAGTTT---- 3' |
| RNF39 | hsa-miR-1290 | beg:248 | end:271 | pic:3' AGGGACT-AGGTTTTTAGGT 5'& |.||||| |.| ||.|| &5' TTCCTGACTTCTCCCATTCA 3' |
| RNF39 | hsa-miR-1290 | beg:174 | end:199 | pic:3' AGGGACTAGGTT---TTTAGGT 5'& |||||| || ||||||| &5' TCCCTGCTCAAAACCAAATCCA 3' |
| RNF39 | hsa-miR-1292 | beg:154 | end:175 | pic:3' GTCGCAGACGGCCTT-GG-GCAAGGGT 5'& |.|| || ||||.||| &5' ---------CTGGTCTCCACGTTTCCA 3' |
| RNF39 | hsa-miR-1296 | beg:21 | end:43 | pic:3' CCTCTACC---TCGGTC-CCGGGATT 5'& ||| .|||| ||||||. &5' -----TGGCCCGGCCACTGGCCCTG- 3' |
| RNF39 | hsa-miR-1296 | beg:482 | end:497 | pic:3' CCTCTACCTCGGTCCCGGGATT 5'& .|.| |||||||. &5' --------GGTCTGGGCCCTG- 3' |
| RNF39 | hsa-miR-1299 | beg:378 | end:399 | pic:3' AGG-GAGTGTGTCTTAAGGTCTT 5'& || ||| | .|| ||||||| &5' -CCACTC-C-TAGC--TCCAGAA 3' |
| RNF39 | hsa-miR-1304 | beg:670 | end:688 | pic:3' GTGTAGAGTGACATCGGAGTTT 5'& ||| || |||||| &5' -----CTCTCTCCT-CCTCAA- 3' |
| RNF39 | hsa-miR-1308 | beg:369 | end:386 | pic:3' GGTGACT-TGGTGGGTACG 5'& ||||| .||||.| &5' CCACTCTTGCCACTC---- 3' |
| RNF39 | hsa-miR-1321 | beg:660 | end:679 | pic:3' TAGTGT--AAGTGGAGGGAC 5'& .| ||| ||||.|| &5' ---GCTATTTCCCCTCTCT- 3' |
| RNF39 | hsa-miR-15bstar | beg:315 | end:337 | pic:3' ATCTCGTCGTTTATTACTAAGC 5'& |.| || | ||||||| &5' TGGTAAAGTGACC-ATGATTC- 3' |
| RNF39 | hsa-miR-181a-2star | beg:827 | end:838 | pic:3' CCATGTCAGTTGCCAGTCACCA 5'& |||||||| &5' --------------TCAGTGGT 3' |
| RNF39 | hsa-miR-1827 | beg:194 | end:208 | pic:3' TAAGTTAGATGACGGAGT 5'& || || ||||||. &5' ---CATTC--CTGCCTT- 3' |
| RNF39 | hsa-miR-185 | beg:213 | end:232 | pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||| |||. | |||||||| &5' TCA-GAAT---C-TTCTCTCC- 3' |
| RNF39 | hsa-miR-185 | beg:660 | end:681 | pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& | |.| || ||||||| &5' ---GCTATTTCCCCTCTCTCC- 3' |
| RNF39 | hsa-miR-185 | beg:593 | end:608 | pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||| ||.|.|||| &5' ---------GCC-TTTTTTCCA 3' |
| RNF39 | hsa-miR-1908 | beg:425 | end:445 | pic:3' CTGGTTAGCGGCAGGGGCGGC 5'& ||| . ||. |||.||| &5' GACTGG--GCTA-CCCTGCC- 3' |
| RNF39 | hsa-miR-1908 | beg:186 | end:207 | pic:3' CTGGTTAGCGGCAGGGGCGGC 5'& ||||| || |.||.||| &5' -ACCAAAT-CCATTCCTGCC- 3' |
| RNF39 | hsa-miR-1909 | beg:165 | end:184 | pic:3' GCCACTCGTGGGC-CGGGGACGC 5'& |. .|| |.|||||| &5' ------GTTTCCACGTCCCTGC- 3' |
| RNF39 | hsa-miR-190b | beg:758 | end:780 | pic:3' TTGGGTTATAGTTTGTATAGT 5'& ..||| ||||. |||| ||. &5' GGCCC-ATATTTAACACATT- 3' |
| RNF39 | hsa-miR-1911star | beg:821 | end:841 | pic:3' CCTCTGGTGTTACGGACCAC 5'& ||||.| ||.|| |||| &5' -GAGATCTCAGTGG-TGGT- 3' |
| RNF39 | hsa-miR-196a | beg:560 | end:584 | pic:3' GGGTTGTTGTACTTTGATGGAT 5'& |||||| | .|||.|.| &5' CCCAACCTCCTATGACTGCTT- 3' |
| RNF39 | hsa-miR-196b | beg:560 | end:584 | pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& |||||| | .|||.|.| &5' CCCAACCTCCTATGACTGCTT- 3' |
| RNF39 | hsa-miR-197 | beg:821 | end:840 | pic:3' CGACCCACCTCTTC---CACCACTT 5'& |||| ||||||. &5' --------GAGATCTCAGTGGTGG- 3' |
| RNF39 | hsa-miR-1976 | beg:90 | end:111 | pic:3' TGT-CGTTCCTCCCGTCCTCC 5'& ||| || ||||||| &5' ACACGCCCATT--GCAGGAG- 3' |
| RNF39 | hsa-miR-198 | beg:216 | end:241 | pic:3' CTTGGAT-AGAGGGGAGACCTGG 5'& |||.|| |||||||| .|. &5' GAATCTTCTCTCCCCTACA-GCT 3' |
| RNF39 | hsa-miR-200b | beg:97 | end:116 | pic:3' AGTAGTAATGGTCCGTCATAAT 5'& ||||. |||| ||||||| &5' ----CATTG-CAGG-AGTATTA 3' |
| RNF39 | hsa-miR-200c | beg:95 | end:116 | pic:3' AGGTAGTAATGGGCCGTCATAAT 5'& || ||||.| || ||||||| &5' -CC--CATTGCA-GG-AGTATTA 3' |
| RNF39 | hsa-miR-202 | beg:509 | end:525 | pic:3' AAGGGTACGGGATATGGAGA 5'& ||..|.||||||| &5' -------GCTTTGTACCTCT 3' |
| RNF39 | hsa-miR-202 | beg:196 | end:217 | pic:3' AAGGGTACGGGATATGGAGA 5'& |.|| ||||.| |. |||| &5' -TTCC-TGCCTTCTGGCTCT 3' |
| RNF39 | hsa-miR-2052 | beg:171 | end:191 | pic:3' TGTAATGACAATAGTTTTGT 5'& ||.| ||| ||||||| &5' ACGTCCCTGC--TCAAAAC- 3' |
| RNF39 | hsa-miR-20bstar | beg:228 | end:249 | pic:3' GACCTTCACGGGT-----ATGATGTCA 5'& ||| ||||||||| &5' ---------CCCTACAGCTACTACAGT 3' |
| RNF39 | hsa-miR-2110 | beg:296 | end:310 | pic:3' GTGAGTCGCCGGCAAAGGGGTT 5'& |||| |||||| &5' --------GGCCC--TCCCCA- 3' |
| RNF39 | hsa-miR-2110 | beg:398 | end:418 | pic:3' GTGAGTCGCCGGCAAAGGGGTT 5'& .||||| |||| ||||||| &5' -GCTCAG-GGCC--TTCCCCA- 3' |
| RNF39 | hsa-miR-2110 | beg:552 | end:568 | pic:3' GTGAGTCGCCGGCAAAGGGGTT 5'& ||. |||||||| &5' ---------GCTAGTTCCCCAA 3' |
| RNF39 | hsa-miR-2110 | beg:50 | end:72 | pic:3' GTGAGTCGCCGGCA-AAGGGGTT 5'& .| | ||. | ||||||| &5' --TTTGGGGGTGGAATTCCCCA- 3' |
| RNF39 | hsa-miR-2110 | beg:730 | end:749 | pic:3' GTGAGTCGCCGGCAAAGGGGTT 5'& |||| | || ||||||| &5' --CTCA-CA-CCC-TTCCCCA- 3' |
| RNF39 | hsa-miR-2114star | beg:331 | end:351 | pic:3' TTCAGGGAACGAACTCCGAGC 5'& |.||| ||||||| &5' ---TTCCTACATAGAGGCTC- 3' |
| RNF39 | hsa-miR-2114star | beg:458 | end:480 | pic:3' TTCAGGGAACGAA-CTCCGAGC 5'& |||. ||||||.| &5' ---TCCTAAAACAAGAGGCTTG 3' |
| RNF39 | hsa-miR-26bstar | beg:278 | end:301 | pic:3' CTCGGTTCATTACCTCTTGTCC 5'& .||| | |||||.||||||| &5' -GGCCT-GCAATGGGGAACAGG 3' |
| RNF39 | hsa-miR-299-3p | beg:321 | end:344 | pic:3' TTCGCCAAATGGT----AGGGTGTAT 5'& |||.| |||| |||.||||| &5' AAGTG----ACCATGATTCCTACATA 3' |
| RNF39 | hsa-miR-29b | beg:652 | end:667 | pic:3' TTGTGACTAAAGTTTACCACGAT 5'& | |||||||||| &5' -----------CCAATGGTGCTA 3' |
| RNF39 | hsa-miR-30c-1star | beg:288 | end:310 | pic:3' CCTCATTTGT-TGGGAGAGGGTC 5'& ||.| |||| .||||| |||| &5' GGGG--AACAGGCCCTC-CCCA- 3' |
| RNF39 | hsa-miR-31 | beg:369 | end:383 | pic:3' TCGATACGGTCGTAGAACGGA 5'& ||| | ||||||| &5' -------CCA-C-TCTTGCC- 3' |
| RNF39 | hsa-miR-3125 | beg:222 | end:246 | pic:3' AGAGAGG---TGTCGAAGGAGAT 5'& ||||||| |||||| |. | &5' TCTCTCCCCTACAGCTACTAC-- 3' |
| RNF39 | hsa-miR-3131 | beg:593 | end:623 | pic:3' TTCCGGG---AAGGTGGTC----AGGAGCT 5'& |||. |||||. || |.||.|| &5' ---GCCTTTTTTCCATAAGAACCTTCTTGA 3' |
| RNF39 | hsa-miR-3138 | beg:427 | end:452 | pic:3' TGAGGGA--GATGGAGT-GACAGGTGT 5'& |. ||||| . |||||||| &5' ----CTGGGCTACCCTGCCTGTCCAC- 3' |
| RNF39 | hsa-miR-3141 | beg:187 | end:210 | pic:3' AGGAGGAGGT--GGGCGGGAG 5'& || |||| ||.|||.|| &5' -CCAAATCCATTCCTGCCTTC 3' |
| RNF39 | hsa-miR-3148 | beg:586 | end:608 | pic:3' TTCGTGTGT-GGTCAAAAAAGGT 5'& || |||| || ||||||||| &5' --GCTCACAGCC--TTTTTTCCA 3' |
| RNF39 | hsa-miR-3150 | beg:288 | end:310 | pic:3' GGTTGGAGCTCCTA------GAGGGGTC 5'& .|.||| ||||||| &5' -------TGGGGAACAGGCCCTCCCCA- 3' |
| RNF39 | hsa-miR-3150 | beg:396 | end:418 | pic:3' GGTTGGAGCTCCTAG-AGGGGTC 5'& .. ||| ||| | |||||| &5' --GGGCTC-AGGGCCTTCCCCA- 3' |
| RNF39 | hsa-miR-3152 | beg:759 | end:778 | pic:3' AATAACGGGGATAAGATTGTGT 5'& |||| |.||||||| &5' -----GCCCATA-TTTAACACA 3' |
| RNF39 | hsa-miR-3158 | beg:499 | end:517 | pic:3' CAGGACGTCTCTCCTTCGGGAA 5'& ||| | .||||||..| &5' --CCT-CT---GGGAAGCTTT- 3' |
| RNF39 | hsa-miR-3158 | beg:288 | end:305 | pic:3' CAGGACGTCTCTCCTTCGGGAA 5'& .|.|| |.||||| &5' -------GGGGAACAGGCCCT- 3' |
| RNF39 | hsa-miR-3175 | beg:213 | end:234 | pic:3' TGCAGTGACGCAAGAGAGGGGC 5'& ||| |||||||||| &5' ---TCAGAATCTTCTCTCCCC- 3' |
| RNF39 | hsa-miR-3175 | beg:614 | end:635 | pic:3' TGCAGTGACGCAAGAGAGGGGC 5'& || .|| .|||||||| &5' ---TC-TTGAAACTTCTCCCCG 3' |
| RNF39 | hsa-miR-3190-5p | beg:155 | end:176 | pic:3' AGAGACCGGCAGATG-GAAGGTGT 5'& ||||.| || || .|||||| &5' ---CTGGTC-TCCACGTTTCCAC- 3' |
| RNF39 | hsa-miR-3190-5p | beg:593 | end:610 | pic:3' AGAGACCGGCAGATGGAAGGTGT 5'& ||| ..|||||.| &5' ------GCCTT---TTTTCCATA 3' |
| RNF39 | hsa-miR-3191 | beg:154 | end:182 | pic:3' GACAGACCGGT----CGA---TGCAGGGGT 5'& ||||.| |.| |||||||. &5' ----CTGGTCTCCACGTTTCCACGTCCCT- 3' |
| RNF39 | hsa-miR-3196 | beg:429 | end:450 | pic:3' CTCCG--GGGACGG-CGGGGC 5'& .||| ||||||| |.|| &5' -GGGCTACCCTGCCTGTCC-- 3' |
| RNF39 | hsa-miR-324-3p | beg:304 | end:326 | pic:3' GGTCGTCGTGGACCCCGTCA 5'& ||| |||.| .||| ||| &5' CCATCAGTA-TTGGTAAAGT 3' |
| RNF39 | hsa-miR-330-5p | beg:387 | end:409 | pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& ||. ||| .|||.|||.| &5' GCTCCAGAA--GGGCTCAGGG- 3' |
| RNF39 | hsa-miR-361-3p | beg:40 | end:59 | pic:3' TTTAGTCTTAGTGTGGACCCCCT 5'& ||| | ..|||||| &5' ----CAGCTGCTT-TTTGGGGG- 3' |
| RNF39 | hsa-miR-373 | beg:232 | end:254 | pic:3' TGTGGGGTTTTAGCTTCGTGAAG 5'& ||| |. ||.||||| &5' ACAGCTACTAC----AGTACTTC 3' |
| RNF39 | hsa-miR-373star | beg:39 | end:58 | pic:3' CCTTTCG-CGGGGGTAAAACTCA 5'& || ||. |. |||||.| &5' -----GCAGCTGCT-TTTTGGG- 3' |
| RNF39 | hsa-miR-376a | beg:565 | end:578 | pic:3' TGCACCTAAAAGGA-GATACTA 5'& ||| |||||| &5' -----------CCTCCTATGA- 3' |
| RNF39 | hsa-miR-376b | beg:565 | end:578 | pic:3' TTGTACCTAAAAGGA-GATACTA 5'& ||| |||||| &5' ------------CCTCCTATGA- 3' |
| RNF39 | hsa-miR-384 | beg:493 | end:512 | pic:3' ATACTTGTTAAAGATCCTTA 5'& |.|| | |||.|||| &5' TGTGGCCC---TCTGGGAA- 3' |
| RNF39 | hsa-miR-384 | beg:72 | end:86 | pic:3' ATACTTGTTAAAGATCCTTA 5'& ||||||.|||| &5' --------ATTTCTGGGAA- 3' |
| RNF39 | hsa-miR-384 | beg:686 | end:697 | pic:3' ATACTTGTTAAAGATCCTTA 5'& ||.||||| &5' ------------CTGGGAAT 3' |
| RNF39 | hsa-miR-423-5p | beg:664 | end:687 | pic:3' TTTCAGAGC-GAGAGACGGGGAGT 5'& |.|| |||||| |.||||| &5' ----TTTCCCCTCTCTCCTCCTCA 3' |
| RNF39 | hsa-miR-4252 | beg:823 | end:838 | pic:3' ACCACGACT-GAGTCACCGG 5'& || ||||||||. &5' -------GATCTCAGTGGT- 3' |
| RNF39 | hsa-miR-4255 | beg:70 | end:89 | pic:3' AGGTAGAGA--CTTGTGAC 5'& .|||.||| |||||| &5' -TCATTTCTGGGAACAC-- 3' |
| RNF39 | hsa-miR-4257 | beg:670 | end:686 | pic:3' GAGTCAGGGGTGGAGACC 5'& ||| ||.|| |||| &5' CTC--TCTCCTCCTC--- 3' |
| RNF39 | hsa-miR-4257 | beg:554 | end:572 | pic:3' GAGTC-AGGGG-TGGAGACC 5'& .|| ||||| ||||| &5' --TAGTTCCCCAACCTC--- 3' |
| RNF39 | hsa-miR-425star | beg:241 | end:258 | pic:3' CCCGCCTGTGCTGTAAGGGCTA 5'& ||| || ||||.|| &5' ------ACAGTAC-TTCCTGA- 3' |
| RNF39 | hsa-miR-4265 | beg:577 | end:597 | pic:3' GGGTCTCGACT----CGGGTGTC 5'& ||| ||.||||| &5' ------GCTTTCTATGCTCACAG 3' |
| RNF39 | hsa-miR-4266 | beg:193 | end:213 | pic:3' CCGGTTC---CGGAGGATC 5'& ||| ||||.||.| &5' --CCATTCCTGCCTTCTGG 3' |
| RNF39 | hsa-miR-4270 | beg:197 | end:218 | pic:3' CGGGA-GG-GGACTGAGGGACT 5'& .||| || .|||.|||.| &5' -TCCTGCCTTCTGGCTCTC--- 3' |
| RNF39 | hsa-miR-4273 | beg:70 | end:89 | pic:3' GACAGGTAGT--CTCTTGTG 5'& .|||. |.|||||| &5' ----TCATTTCTGGGAACAC 3' |
| RNF39 | hsa-miR-4274 | beg:537 | end:558 | pic:3' GTC-CCCCTCCCTGA-CGAC 5'& .| |||||||||| ||| &5' -GGTGGGGAGGGACAAGCT- 3' |
| RNF39 | hsa-miR-4278 | beg:563 | end:575 | pic:3' GTTCCCGTTTGGGGGATC 5'& ||||.|||| &5' --------AACCTCCTA- 3' |
| RNF39 | hsa-miR-4280 | beg:575 | end:593 | pic:3' CGAGACGAGTCTTGATGTGAG 5'& |||||. |||..||| &5' ---CTGCTTT---CTATGCTC 3' |
| RNF39 | hsa-miR-4286 | beg:528 | end:547 | pic:3' CCATGGTCCTCACCCCA 5'& || | ||.|||||| &5' GGATCTGGGGGTGGGG- 3' |
| RNF39 | hsa-miR-4288 | beg:688 | end:707 | pic:3' CCTTTGAGTCGTCTGTT 5'& ||.||. | |||||| &5' GGGAATACTTCAGACA- 3' |
| RNF39 | hsa-miR-4291 | beg:343 | end:356 | pic:3' TCGACAAGGACGACTT 5'& | .||||||. &5' ----GGCTCTGCTGG- 3' |
| RNF39 | hsa-miR-4295 | beg:78 | end:95 | pic:3' TTCCTTTTGTAACGTGAC 5'& .|||| ||||| ||| &5' -GGGAACACATT-CAC-- 3' |
| RNF39 | hsa-miR-4296 | beg:577 | end:596 | pic:3' ACTCGGACT---CGGGTGTA 5'& ||.| ||.|||| &5' ---GCTTTCTATGCTCACA- 3' |
| RNF39 | hsa-miR-4296 | beg:322 | end:343 | pic:3' ACTCGG-ACTC-GGGTGTA 5'& ||| || ||| ||.|||| &5' TGA-CCATGATTCCTACAT 3' |
| RNF39 | hsa-miR-4296 | beg:403 | end:420 | pic:3' ACTCGGACTCGGGTGTA 5'& |.|||| |||||| &5' -GGGCCTTC-CCCACA- 3' |
| RNF39 | hsa-miR-4306 | beg:221 | end:232 | pic:3' ATGACGGAAAGAGAGGT 5'& |||||||| &5' --------TTCTCTCC- 3' |
| RNF39 | hsa-miR-4306 | beg:662 | end:681 | pic:3' ATGACGGAAAGAGAGGT 5'& ||.| || ||||||| &5' TATTTCCCCTCTCTCC- 3' |
| RNF39 | hsa-miR-4306 | beg:593 | end:608 | pic:3' ATGACGGAAAGAGAGGT 5'& ||| ||.|.|||| &5' ----GCC-TTTTTTCCA 3' |
| RNF39 | hsa-miR-4312 | beg:537 | end:558 | pic:3' ACC-CCTGTCCTTGTTCCGG 5'& || ||. |||.|||| ||. &5' -GGTGGGGAGGGACAA-GCT 3' |
| RNF39 | hsa-miR-4315 | beg:384 | end:401 | pic:3' CAGGTCGA-GTCTTTCGCC 5'& |.|||| |||||.| &5' --CTAGCTCCAGAAGG--- 3' |
| RNF39 | hsa-miR-4316 | beg:717 | end:738 | pic:3' GTGGT---CG-ATCGGAGTGG 5'& || |. |||.||||| &5' --CCTTGTGTATAGTCTCAC- 3' |
| RNF39 | hsa-miR-4318 | beg:234 | end:249 | pic:3' TCGTACATGGGTGTCAC 5'& ||| |.||||| &5' AGCTA----CTACAGT- 3' |
| RNF39 | hsa-miR-4320 | beg:212 | end:226 | pic:3' TCCTTCGATGTCTTAGGG 5'& || |||||||.. &5' ------CT-CAGAATCTT 3' |
| RNF39 | hsa-miR-4323 | beg:531 | end:550 | pic:3' AGACTCCGACACCCCGAC 5'& ||||.|| |||||| | &5' TCTGGGG--GTGGGGAGG 3' |
| RNF39 | hsa-miR-4327 | beg:169 | end:192 | pic:3' GGT-CAGGGGGTACGTTCGG 5'& ||| |||||. || || &5' CCACGTCCCTGCTCAAAACC 3' |
| RNF39 | hsa-miR-4330 | beg:525 | end:547 | pic:3' CGTTCCGAGACTAG-ACTCC 5'& |||.| ||||. ||.|| &5' GCAGGA-TCTGGGGGTGGGG 3' |
| RNF39 | hsa-miR-4330 | beg:341 | end:356 | pic:3' CGTTCCGAGACTAGACTCC 5'& .|||||||| |||. &5' --GAGGCTCTG--CTGG-- 3' |
| RNF39 | hsa-miR-455-5p | beg:626 | end:641 | pic:3' GCTACATCAGGTTTCCGTGTAT 5'& ||| ||||||| &5' --------TCCCC--GCACATA 3' |
| RNF39 | hsa-miR-483-3p | beg:527 | end:549 | pic:3' TTCTGC-CCTCCTCTCCTCACT 5'& |.||. ||.|| |.|||| &5' AGGATCTGGGGGTGGGGAG--- 3' |
| RNF39 | hsa-miR-491-5p | beg:51 | end:74 | pic:3' GGAGTACCTTC-CC--AAGGGGTGA 5'& |||..| || ||||||||| &5' -----TGGGGGTGGAATTCCCCACT 3' |
| RNF39 | hsa-miR-491-5p | beg:290 | end:311 | pic:3' GGAGTACCT--TCCCA-AGGGGTGA 5'& ||| ||| ||||||. &5' ------GGAACAGGCCCTCCCCAT- 3' |
| RNF39 | hsa-miR-491-5p | beg:396 | end:419 | pic:3' GGAGTACCT---TCCC--AAGGGGTGA 5'& ||. |||| |||||||| &5' ------GGGCTCAGGGCCTTCCCCAC- 3' |
| RNF39 | hsa-miR-493 | beg:397 | end:414 | pic:3' GGACCGTGTGTCATCTGGAAGT 5'& ||| ||| |.||||| &5' ---GGCT--CAG--GGCCTTC- 3' |
| RNF39 | hsa-miR-496 | beg:577 | end:594 | pic:3' CTCTAACCGGTACATTATGAGT 5'& ||. ||.|||| &5' -------GCTTTCT-ATGCTCA 3' |
| RNF39 | hsa-miR-505star | beg:194 | end:218 | pic:3' TGTAGTTATGAAGGACCGAGGG 5'& |||. |.| |.|||||||.| &5' -CATTCCTGCCTTCTGGCTCTC 3' |
| RNF39 | hsa-miR-508-3p | beg:712 | end:734 | pic:3' AGATGAGGTTTT-CCGATGTTAGT 5'& |||| | ||.|.|| &5' ---ACTCATCCTTGTGTATAGTC- 3' |
| RNF39 | hsa-miR-516a-3p | beg:497 | end:514 | pic:3' TGGGAGACTTTCCTTCGT 5'& .||||||| |||||| &5' GCCCTCTG---GGAAGC- 3' |
| RNF39 | hsa-miR-516b | beg:376 | end:398 | pic:3' TTTCACGA--AGAATGGAGGTCTA 5'& ||| || || ||||||| &5' ----TGCCACTCCTAGCTCCAGA- 3' |
| RNF39 | hsa-miR-516bstar | beg:497 | end:514 | pic:3' TGGGAGACTTTCCTTCGT 5'& .||||||| |||||| &5' GCCCTCTG---GGAAGC- 3' |
| RNF39 | hsa-miR-520a-3p | beg:232 | end:253 | pic:3' TGTCAGGTTTCCCTTCGTGAAA 5'& |||| |.| ||.|||| &5' ACAG-CTACTAC--AGTACTT- 3' |
| RNF39 | hsa-miR-520a-5p | beg:494 | end:510 | pic:3' TCTTTCATGAAGGGAGACCTC 5'& ||. ||||||||. &5' -----GTGG--CCCTCTGGG- 3' |
| RNF39 | hsa-miR-520d-3p | beg:229 | end:253 | pic:3' TGGGTGGTTTCTCT-TCGTGAAA 5'& ||.|| ||.|||| &5' -CCTACAGCTACTACAGTACTT- 3' |
| RNF39 | hsa-miR-520d-5p | beg:787 | end:807 | pic:3' CTTTCCCGAAGG--GAAACATC 5'& |||.| .|||||. &5' ----GGGTTATTTATTTTGTG- 3' |
| RNF39 | hsa-miR-525-5p | beg:494 | end:510 | pic:3' TCTTTCACGTAGGGAGACCTC 5'& ||| ||||||||. &5' -----GTGG--CCCTCTGGG- 3' |
| RNF39 | hsa-miR-527 | beg:504 | end:532 | pic:3' CTTTCC--CGAAG------GGAAACGTC 5'& .|| ||||. |.||||||| &5' ---GGGAAGCTTTGTACCTCTTTTGCAG 3' |
| RNF39 | hsa-miR-532-3p | beg:525 | end:550 | pic:3' ACGTTC-GGAA-CCCACACCCTCC 5'& ||||.| .|| ||||| |||||| &5' TGCAGGATCTGGGGGTG-GGGAGG 3' |
| RNF39 | hsa-miR-542-5p | beg:164 | end:183 | pic:3' AGAGCACTGTACTACTAGGGGCT 5'& ||| | .||||.| &5' ---CGTTTCCAC---GTCCCTG- 3' |
| RNF39 | hsa-miR-544 | beg:94 | end:110 | pic:3' CTTGAACGATTTTTACGTCTTA 5'& || |||||.| &5' ------GCCCAT--TGCAGGA- 3' |
| RNF39 | hsa-miR-559 | beg:785 | end:805 | pic:3' AAAACCACGTATAAATGAAAT 5'& ||||| |. ||||||.|||. &5' -TTTGG-GT-TATTTATTTTG 3' |
| RNF39 | hsa-miR-562 | beg:32 | end:53 | pic:3' CGTTTACC---ATGTCGATGAAA 5'& ||| |.|||||.|||| &5' -----TGGCCCTGCAGCTGCTTT 3' |
| RNF39 | hsa-miR-573 | beg:693 | end:704 | pic:3' GACTAGTCAATGTGTAGTGAAGTC 5'& .||||||| &5' ----------------TACTTCAG 3' |
| RNF39 | hsa-miR-574-5p | beg:82 | end:107 | pic:3' TGTGTGAGTGTGTGTGTGTGAGT 5'& |||||.||||||.| ||. || &5' ACACATTCACACGCCCATTG-CA 3' |
| RNF39 | hsa-miR-574-5p | beg:621 | end:645 | pic:3' TGTGT-GAGTGTGTGTGTGTGAGT 5'& || ||| | |.||||.||||| &5' --ACTTCTCCC-CGCACATACTCA 3' |
| RNF39 | hsa-miR-575 | beg:437 | end:454 | pic:3' CGA-GGACAGGTTGACCGAG 5'& || ||||||| |||| &5' -CTGCCTGTCC-ACTG---- 3' |
| RNF39 | hsa-miR-576-3p | beg:121 | end:133 | pic:3' CTAAGGTTAAAAAGGTGTAGAA 5'& ||||||.|| &5' -------------CCACATTTT 3' |
| RNF39 | hsa-miR-576-3p | beg:797 | end:812 | pic:3' CTAAGGTTAAAAAGGTGTAGAA 5'& |||| ..||||| &5' ---------TTTTGTGCATCT- 3' |
| RNF39 | hsa-miR-576-3p | beg:761 | end:782 | pic:3' CTAAGGTTAAAAAGGTGTAGAA 5'& ||| ||| |||||.|| &5' ----CCATATTTAACACATTTT 3' |
| RNF39 | hsa-miR-578 | beg:458 | end:474 | pic:3' TGTTAGGATCTCGTGTTCTTC 5'& ||||| ||||||.| &5' ----TCCTAAA--ACAAGAGG 3' |
| RNF39 | hsa-miR-578 | beg:594 | end:614 | pic:3' TGTTAGGATCTC--GTGTTCTTC 5'& ||| ||.||||| &5' -----CCTTTTTTCCATAAGAA- 3' |
| RNF39 | hsa-miR-585 | beg:85 | end:102 | pic:3' ATCGTATGTCTATGCGGGT 5'& ||| || ||||||| &5' ---CATTCAC--ACGCCCA 3' |
| RNF39 | hsa-miR-601 | beg:264 | end:285 | pic:3' GAGGAGGTTGTTAGGATCTGGT 5'& .|| ||| ||.||||.|| &5' ---TTCAAACCATTCTAGGCC- 3' |
| RNF39 | hsa-miR-604 | beg:31 | end:48 | pic:3' CAGGACTTAAGGCGTCGGA 5'& |||. |.|||||. &5' ---CTGGCC-CTGCAGCT- 3' |
| RNF39 | hsa-miR-610 | beg:626 | end:645 | pic:3' AGGGTCGTGTGTAAATCGAGT 5'& |||| |||||.| |||| &5' TCCCCGCACATA-----CTCA 3' |
| RNF39 | hsa-miR-620 | beg:0 | end:13 | pic:3' TAAAGATATAGA-TAGAGGTA 5'& .||| .|||||| &5' --------GTCTCGTCTCCA- 3' |
| RNF39 | hsa-miR-620 | beg:154 | end:166 | pic:3' TAAAGATATAGA-TAGAGGTA 5'& || .|||||| &5' ----------CTGGTCTCCA- 3' |
| RNF39 | hsa-miR-621 | beg:341 | end:359 | pic:3' TCCATTCGCGACAACGATCGG 5'& .|| ||| ||||.|.| &5' ----GAG-GCTC-TGCTGGTC 3' |
| RNF39 | hsa-miR-625 | beg:655 | end:675 | pic:3' CCTGATATCTTGA-AAGGGGGA 5'& ||.| .|| ||.||||| &5' -----ATGGTGCTATTTCCCCT 3' |
| RNF39 | hsa-miR-634 | beg:339 | end:358 | pic:3' CAGGTTTCAACCCCACGACCAA 5'& .|.|| ||||||| &5' ---TAGAGGCTC--TGCTGGT- 3' |
| RNF39 | hsa-miR-642 | beg:539 | end:553 | pic:3' GTTCTGTGTAAACCTCTCCCTG 5'& |||.||||||| &5' -----------TGGGGAGGGAC 3' |
| RNF39 | hsa-miR-648 | beg:169 | end:187 | pic:3' TGGT-CACGGGACGTGTGAA 5'& ||| || |||||| || &5' -CCACGT-CCCTGCTCA--- 3' |
| RNF39 | hsa-miR-650 | beg:192 | end:211 | pic:3' CAGGACTCTCGCGACGGAGGA 5'& ||| | ||||||.|| &5' -TCCATT---C-CTGCCTTCT 3' |
| RNF39 | hsa-miR-663b | beg:424 | end:440 | pic:3' GGAGTCCGTGCC-GGCCCGGTGG 5'& || |.||||.||| &5' ----------GGACTGGGCTACC 3' |
| RNF39 | hsa-miR-665 | beg:198 | end:213 | pic:3' TCCCCGGAGTCGGAGGACCA 5'& ||| ||||.|||| &5' -----CCT--GCCTTCTGG- 3' |
| RNF39 | hsa-miR-675star | beg:536 | end:557 | pic:3' ACTCGCCACTCCC-GTATGTC 5'& |.|.|| ||||| || .| &5' -GGGTGGGGAGGGACAAGC-- 3' |
| RNF39 | hsa-miR-744star | beg:799 | end:821 | pic:3' TCCAACTCCAAT-CACCGTTGTC 5'& ||| |||||||.| &5' ---TTGTGCATCTGTGGCAATA- 3' |
| RNF39 | hsa-miR-760 | beg:409 | end:433 | pic:3' AGGGGTGTCTGGGTCTC-GGC 5'& ||||||||||.|.| | |.| &5' TCCCCACAGATCTAAGGACTG 3' |
| RNF39 | hsa-miR-760 | beg:626 | end:648 | pic:3' AGGGGTGTC--TGGGTCTCGGC 5'& |||||.|| ||.|| .| &5' TCCCCGCACATACTCACGG--- 3' |
| RNF39 | hsa-miR-761 | beg:344 | end:356 | pic:3' ACACAGTCAAAGTGGGACGACG 5'& .|.|||||| &5' ------------GCTCTGCTG- 3' |
| RNF39 | hsa-miR-765 | beg:662 | end:684 | pic:3' GTAGTGGAAGGA-AGAGGAGGT 5'& .||. || ||| |||||||| &5' TATTTCC--CCTCTCTCCTCC- 3' |
| RNF39 | hsa-miR-765 | beg:614 | end:634 | pic:3' GTAGTGGAAGGAA---GAGGAGGT 5'& ||||.| ||.|||| &5' ------CTTCTTGAAACTTCTCC- 3' |
| RNF39 | hsa-miR-767-5p | beg:644 | end:665 | pic:3' GTACGAGTCTG---TTGG-TACCACGT 5'& |.|| |||| ||||||| &5' ------CGGAAAGGAACCAATGGTGC- 3' |
| RNF39 | hsa-miR-770-5p | beg:297 | end:320 | pic:3' ACCGGGACT-GTGCACCATGACCT 5'& |||||| ||. |||.||| &5' -GGCCCTCCCCATCA-GTATTGG- 3' |
| RNF39 | hsa-miR-920 | beg:552 | end:566 | pic:3' ATGACGAAGGTGTCGAGGGG 5'& ||| ||.||||| &5' ----GCT-----AGTTCCCC 3' |
| RNF39 | hsa-miR-922 | beg:345 | end:356 | pic:3' CTGCATCAGGATAAGAGACGACG 5'& |||||||| &5' --------------CTCTGCTG- 3' |
| RNF39 | hsa-miR-936 | beg:345 | end:356 | pic:3' GACGCTAAGGAGGGAGATGACA 5'& ||||.||| &5' -------------CTCTGCTG- 3' |
| RNF39 | hsa-miR-939 | beg:294 | end:310 | pic:3' GTGGGGGTCTCGGAGTCGAGGGGT 5'& ||| ||| ||||||| &5' ------CAG-GCC----CTCCCCA 3' |
| RNF39 | hsv1-miR-H1 | beg:192 | end:211 | pic:3' AGGTGAAGGGCAGGAAGGTAG 5'& |||| ||||.| |||||. &5' TCCA-TTCCTG-CCTTCT--- 3' |
| RNF39 | hsv1-miR-H2 | beg:375 | end:408 | pic:3' TCAGC-GTGAGC----AGGGA---CCGAGTCC 5'& |.| ||||| ||| |||||||| &5' --TTGCCACTCCTAGCTCCAGAAGGGCTCAGG 3' |
| RNF39 | hsv1-miR-H5-5p | beg:559 | end:574 | pic:3' CATCTCTACGGGCTTGGGGGGG 5'& ||| ||||.||. &5' ---------CCCCAACCTCCT- 3' |
| RNF39 | hsv1-miR-H8star | beg:524 | end:543 | pic:3' ATATATGTCCCTGGCCCCCG 5'& |.|||| |.|||||. &5' ----TGCAGGATCTGGGGGT 3' |
| RNF39 | hsv2-miR-H2 | beg:387 | end:406 | pic:3' AGCGCGTACTGGG---TCCGAGTCT 5'& || || .||||||| &5' ----GCT---CCAGAAGGGCTCAG- 3' |
| RNF39 | hsv2-miR-H9-3p | beg:525 | end:548 | pic:3' CTCCTCCTCTGGCTCCACCCTT 5'& | |||| . |.||||||.| &5' --GCAGGATCTGGGGGTGGGGA 3' |
| RNF39 | jcv-miR-J1-5p | beg:200 | end:222 | pic:3' TACGAAAAGGGTCCAGAGTCTT 5'& ||| |.| | |||||||| &5' -TGCC--TTCTGGCTCTCAGAA 3' |
| RNF39 | kshv-miR-K12-11star | beg:800 | end:817 | pic:3' GGATCTTTACAAATTCGACACTGG 5'& ||| |||||.| &5' --------TGTGCAT-CTGTGGC- 3' |
| RNF39 | kshv-miR-K12-12star | beg:213 | end:236 | pic:3' AGTTGGTCCCGT--GGGAGGGGGT 5'& .||| |.||||||.| &5' ----TCAGAATCTTCTCTCCCCTA 3' |
| RNF39 | kshv-miR-K12-2 | beg:228 | end:249 | pic:3' GTCTAGCTGGGCC-----TGATGTCAA 5'& ||| |||||||| &5' --------CCCTACAGCTACTACAGT- 3' |
| RNF39 | kshv-miR-K12-5star | beg:566 | end:584 | pic:3' GGAATCCCGTGGTCCCTGATGGA 5'& | || ||||.|.| &5' --------CTCCTATGACTGCTT 3' |