SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs6365 | snp | A/C/G/T | 0.406641 | 0.194842 | intron-variant | CDRT1 | GRCh38.p7 | 17:15589496 | TCATAAGAGGGGAAC[A/C/G/T]CAGGAGGCTGGCTCG | 374286 |
rs151439 | snp | C/T | 0.4872 | 0.0789694 | intron-variant | CDRT1 | GRCh38.p7 | 17:15590320 | CTGATCTGTGCCAGT[C/T]CCTCCACTGTATGAA | 374286 |
rs151440 | snp | A/G | 0.48498 | 0.0853497 | intron-variant | CDRT1 | GRCh38.p7 | 17:15590155 | GGGAGATGAGGAGAC[A/G]GTGGCAGAAAGAGGC | 374286 |
rs151442 | snp | A/C/G/T | 0.0134471 | 0.080937 | intron-variant, synonymous-codon | CDRT1 | GRCh38.p7 | 17:15589095 | GAGACTCCACATCGC[A/C/G/T]GGACACTTACCAGCA | 374286 |
rs151443 | snp | A/G | 0.00795532 | 0.062565 | intron-variant, utr-variant-3-prime | CDRT1 | GRCh38.p7 | 17:15588796 | CAACTCAATCACACT[A/G]CCTAAAATCGGCACT | 374286 |
rs151444 | snp | C/T | 0.00835141 | 0.0640778 | intron-variant | CDRT1 | GRCh38.p7 | 17:15588527 | ACTTACTCCTCTCTA[C/T]AAGAGAAATGATCAT | 374286 |
rs151446 | snp | C/T | 0.299664 | 0.245017 | intron-variant | CDRT1 | GRCh38.p7 | 17:15580535 | ATATACCACTATTTT[C/T]ATCTTCaattttaat | 374286 |
rs151447 | snp | C/T | 0.4608 | 0.1344 | intron-variant | CDRT1 | GRCh38.p7 | 17:15575262 | CGGAAGACCATAAGA[C/T]AGAAAAGGGGTCCCA | 374286 |
rs151448 | snp | A/G | 0.49995 | 0.00499176 | intron-variant | CDRT1 | GRCh38.p7 | 17:15566668 | gaggctgaggcagga[A/G]aacggcgtgaacccg | 374286 |
rs163373 | snp | C/T | 0.139225 | 0.224118 | intron-variant | CDRT1 | GRCh38.p7 | 17:15598928 | CAGCCTCCCAAAGTG[C/T]TGGGATTACAGGGGT | 374286 |
rs163377 | snp | A/G | 0.000399281 | 0.0141238 | intron-variant | CDRT1 | GRCh38.p7 | 17:15606333 | tcgttctctggtcag[A/G]ttggtctcaaagctc | 374286 |
rs171047 | snp | C/T | 0 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15575339 | GGCTGGCAGAGGTGC[C/T]GGGAGAGCCCTCAGG | 374286 |
rs173071 | snp | C/G | 0 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15602666 | gcactccagcctggg[C/G]gacagcgagactccg | 374286 |
rs180537 | snp | C/G | 0.5 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15575193 | AGTGTTTTGCCCTAG[C/G]AGATTATAGCTGCCA | 374286 |
rs183506 | snp | A/C/G/T | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15602649 | acagcgagactccgt[A/C/G/T]tcaaaaaaaaaaaaa | 374286 |
rs187344 | snp | C/G | 0 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15570814 | ccgagcccaGTTTCA[C/G]TGGGGAGCAGCCCAT | 374286 |
rs189279 | snp | G/T | 0 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15566607 | tgccactgcactcca[G/T]cctgggtgacagagc | 374286 |
rs190186 | snp | A/C/G/T | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15602735 | gaggctgaggcagga[A/C/G/T]aatggcgtgaacccc | 374286 |
rs236783 | snp | G/T | 0.0107246 | 0.0724382 | intron-variant | CDRT1 | GRCh38.p7 | 17:15587567 | CTGGAACTACAGTAC[G/T]GAATGAAGTCAGGGC | 374286 |
rs236784 | snp | A/T | 0.399253 | 0.200558 | intron-variant | CDRT1 | GRCh38.p7 | 17:15586786 | CCTCCTGCATCAAAT[A/T]AATTACTTTCTTCAT | 374286 |
rs236785 | snp | A/C | 0.488786 | 0.0740357 | intron-variant | CDRT1 | GRCh38.p7 | 17:15586682 | ACATTCCTTGCCTTT[A/C]TCTCTTCCATCCCTC | 374286 |
rs236786 | snp | C/T | 0.494651 | 0.0514399 | intron-variant | CDRT1 | GRCh38.p7 | 17:15585674 | ttagcagaaagcttc[C/T]ccagagagttcttct | 374286 |
rs236787 | snp | A/G/T | 0.474992 | 0.108989 | intron-variant | CDRT1 | GRCh38.p7 | 17:15585543 | ttggctccttctgcc[A/G/T]tctttttgtttccta | 374286 |
rs236788 | snp | A/T | 0.320096 | 0.239972 | intron-variant | CDRT1 | GRCh38.p7 | 17:15584627 | TGGCACGAGGAGCCC[A/T]CAATCAGTGGACTTC | 374286 |
rs236789 | snp | C/T | 0 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15583636 | CCCAACTCAAGACTC[C/T]AGCCACCCCAGGCCC | 374286 |
rs236790 | snp | C/T | 0.256619 | 0.249912 | intron-variant | CDRT1 | GRCh38.p7 | 17:15583543 | CAAATAGCCTAATAC[C/T]GCATTCCCTGAAACC | 374286 |
rs236792 | snp | C/T | 0.490563 | 0.0680388 | intron-variant | CDRT1 | GRCh38.p7 | 17:15581619 | GGCCTGGTTAGGTCA[C/T]CCACTTTCAGTTGTC | 374286 |
rs236793 | snp | C/T | 0.296109 | 0.245711 | intron-variant | CDRT1 | GRCh38.p7 | 17:15579503 | TTAACTTTAATTTCC[C/T]GTGTAAATCCCACAT | 374286 |
rs236794 | snp | A/G | 0.499946 | 0.00519141 | intron-variant | CDRT1 | GRCh38.p7 | 17:15578056 | TCCATCTTTTGTATG[A/G]CCATCTCTTACTCAT | 374286 |
rs236795 | snp | G/T | 0.393434 | 0.20476 | intron-variant | CDRT1 | GRCh38.p7 | 17:15577848 | TAGTGCAAAGTCACT[G/T]CACTGAAAAAACACA | 374286 |
rs236796 | snp | C/T | 0.442249 | 0.159814 | intron-variant | CDRT1 | GRCh38.p7 | 17:15577303 | TACAAAAAGTTTTTG[C/T]GAACTCTTCATACCA | 374286 |
rs236797 | snp | C/G | 0.29046 | 0.246704 | intron-variant | CDRT1 | GRCh38.p7 | 17:15576906 | AAGAACAGGGTTTAG[C/G]TTAAGTATTATAGGG | 374286 |
rs236798 | snp | C/T | 0.432651 | 0.170701 | intron-variant | CDRT1 | GRCh38.p7 | 17:15576462 | AATTCTTGTTTGTAC[C/T]GATCTATTCATTTCA | 374286 |
rs236799 | snp | C/T | 0.5 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15575122 | GTGGTTAAAAGTGAA[C/T]GTTCCCAATATTTCT | 374286 |
rs236801 | snp | C/G | 0.306679 | 0.24349 | intron-variant | CDRT1 | GRCh38.p7 | 17:15574044 | TCCTCTCCCAGCAGC[C/G]TGAGAGACACCTGGC | 374286 |
rs236802 | snp | A/C/T | 0.595949 | 0.14124 | intron-variant | CDRT1 | GRCh38.p7 | 17:15572876 | CCCATTTGTACAACT[A/C/T]ATTTCTGGCTTCTCC | 374286 |
rs236803 | snp | C/G | 0.38555 | 0.210062 | intron-variant | CDRT1 | GRCh38.p7 | 17:15572287 | agtaatatggtcagg[C/G]ttgcatggtgaagca | 374286 |
rs236811 | snp | C/T | 0.386504 | 0.209444 | intron-variant | CDRT1 | GRCh38.p7 | 17:15566829 | cgcctgtaatcccag[C/T]actttgggaggccga | 374286 |
rs236813 | snp | A/C/G | 0.096198 | 0.197235 | utr-variant-3-prime | CDRT1 | GRCh38.p7 | 17:15565964 | CAGTCCACCATACCC[A/C/G]AGCCCATGATTATCC | 374286 |
rs236814 | snp | C/T | 0.499996 | 0.00139776 | upstream-variant-2KB, intron-variant | TVP23C, TVP23C-CDRT4, CDRT1 | GRCh38.p7 | 17:15565156 | AGTTTTCTGGTATTT[C/T]TGCACAGAAGCCTGA | 374286 |
rs236815 | snp | G/T | 0.499928 | 0.00598999 | upstream-variant-2KB, intron-variant | TVP23C, TVP23C-CDRT4, CDRT1 | GRCh38.p7 | 17:15565130 | CCTGATGAAACCCAT[G/T]AAGAATTTAAAAGGG | 374286 |
rs574168 | snp | A/C | 0 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15584292 | AATGATGTTGATGCA[A/C]AAAATATATTTAATA | 374286 |
rs597532 | snp | C/T | 0.41325 | 0.18934 | intron-variant | CDRT1 | GRCh38.p7 | 17:15575176 | TCAGGAGGATAAAAC[C/T]AAGTGTTTTGCCCTA | 374286 |
rs597535 | snp | A/G | 0.41325 | 0.18934 | intron-variant | CDRT1 | GRCh38.p7 | 17:15575178 | AGGAGGATAAAACCA[A/G]GTGTTTTGCCCTAGG | 374286 |
rs625889 | snp | A/G | 0 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15583529 | TATACAGTTGTTTTG[A/G]TTTCAGGGAATGCGG | 374286 |
rs639153 | snp | G/T | 0 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15584224 | AAAAAAGTATATTGG[G/T]TGAATTAATTGTGGT | 374286 |
rs762697 | snp | C/T | 0.478104 | 0.102316 | intron-variant | CDRT1 | GRCh38.p7 | 17:15596423 | CAGGTCATCCTAGAG[C/T]AACTGAGTATGGCCT | 374286 |
rs762698 | snp | A/C/T | 0.000399281 | 0.0141238 | intron-variant | CDRT1 | GRCh38.p7 | 17:15596347 | GAGGCATTCAGAGTC[A/C/T]GTGGAGGGTAGGGGC | 374286 |
rs762699 | snp | A/G | 0.000399281 | 0.0141238 | intron-variant | CDRT1 | GRCh38.p7 | 17:15596325 | GGTAGGGGCTCCACC[A/G]CCCACATCATGACCC | 374286 |
rs762700 | snp | A/G | 0.000798403 | 0.0199641 | intron-variant | CDRT1 | GRCh38.p7 | 17:15596307 | CACATCATGACCCAC[A/G]GTATCATGGGGTTGG | 374286 |
rs949426 | snp | C/G | 0.288906 | 0.246954 | intron-variant | CDRT1 | GRCh38.p7 | 17:15586837 | AATCTCCTCCCTAAT[C/G]TCTATTCTATCCCTT | 374286 |
rs1026260 | snp | A/G | 0.5 | 0 | utr-variant-3-prime | CDRT1 | GRCh38.p7 | 17:15566215 | CCCTGCAGCACGCCC[A/G]TAATTCCGGGGAATT | 374286 |
rs1377221 | snp | C/T | 0.2408 | 0.249831 | intron-variant | CDRT1 | GRCh38.p7 | 17:15606790 | CACTAAGCATAAAAA[C/T]TCAACTTTGCCTTTC | 374286 |
rs1377222 | snp | C/T | 0.4998 | 0.00999798 | intron-variant | CDRT1 | GRCh38.p7 | 17:15606837 | CTGTCTTCCCCATAC[C/T]GACTGTTCTATTGTC | 374286 |
rs1377223 | snp | A/G | 0.4928 | 0.0595664 | intron-variant | CDRT1 | GRCh38.p7 | 17:15606850 | ACTGACTGTTCTATT[A/G]TCAAGATGCAATTTG | 374286 |
rs1377224 | snp | A/G | 0.10237 | 0.201756 | intron-variant | CDRT1 | GRCh38.p7 | 17:15606988 | GGACCTTCGTCTCTC[A/G]GCATATTGAAATGAT | 374286 |
rs1812044 | snp | C/T | 0.0329836 | 0.124112 | intron-variant | CDRT1 | GRCh38.p7 | 17:15618199 | ctgggactacaggtg[C/T]gtgccaccatgtcct | 374286 |
rs1901692 | snp | A/G | 0.0198 | 0.0975087 | | | GRCh38.p7 | 17:15606810 | CTTTGCCTTTCCCCT[A/G]TCTTATCTGTTCTGT | 374286 |
rs1901693 | snp | C/T | 0.4422 | 0.159872 | | | GRCh38.p7 | 17:15606944 | GTGAAGTCCTAGGCC[C/T]AAAATATGGCAGAAA | 374286 |
rs1972442 | snp | A/G | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15600777 | caggcatgagccacc[A/G]cgcccggccgacaat | 374286 |
rs2010495 | snp | C/T | 0.0341408 | 0.126114 | intron-variant | CDRT1 | GRCh38.p7 | 17:15618105 | cctgacctcgtgatc[C/T]gcctgcctcggcctc | 374286 |
rs2076843 | snp | G/T | 0.0134861 | 0.0810011 | intron-variant | CDRT1 | GRCh38.p7 | 17:15586558 | tgcatagtcttttca[G/T]aatatgcattttcca | 374286 |
rs2123373 | snp | A/G | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15579187 | aaAAGGTGTCTGTGT[A/G]TGTGAAACCACAATC | 374286 |
rs2123374 | snp | C/G | | | intron-variant, utr-variant-3-prime | CDRT1 | GRCh38.p7 | 17:15588832 | GAGATGATCACTCCA[C/G]GTTCTCTGCCTTTTT | 374286 |
rs2167725 | snp | C/T | 0 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15579246 | TATATTTTCTTCTTA[C/T]ATTCTTTGCATTTCT | 374286 |
rs2167726 | snp | C/T | 0.146314 | 0.227484 | intron-variant | CDRT1 | GRCh38.p7 | 17:15579253 | TCTTCTTACATTCTT[C/T]GCATTTCTTTTAAAC | 374286 |
rs2190756 | snp | A/G | 0.07777 | 0.181209 | intron-variant | CDRT1 | GRCh38.p7 | 17:15605207 | GTGAGGAGTCCAAAG[A/G]CATCATGATCCCTGT | 374286 |
rs2190757 | snp | G/T | 0.5 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15605133 | CTTCTTCTTTTTATA[G/T]TTAACAGTTTTCCTA | 374286 |
rs2190758 | snp | A/C | 0.5 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15605038 | GTATATATTGCTTAA[A/C]ATTTGAATGAGATGG | 374286 |
rs2215088 | snp | C/T | 0.5 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15604914 | ATTTGTTCTTACAGA[C/T]TCTTTCAGGGGAACG | 374286 |
rs2250088 | snp | C/T | 0.418653 | 0.184544 | upstream-variant-2KB | CDRT1 | GRCh38.p7 | 17:15621397 | TTGAGAAGATGACAA[C/T]GGGCTGCCTCCTGAG | 374286 |
rs2257237 | snp | C/T | 0.375 | 0.216506 | intron-variant | CDRT1 | GRCh38.p7 | 17:15572050 | TAAATTTATATGTTC[C/T]ATATCTTGATTGTGG | 374286 |
rs2257284 | snp | A/G | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15581494 | TTAGACTTCTGACTT[A/G]CCTGCACTATCTACT | 374286 |
rs2258057 | snp | A/C | 0.0257191 | 0.110445 | intron-variant | CDRT1 | GRCh38.p7 | 17:15572530 | ccctgccttcattcc[A/C]gtccggtggggaagg | 374286 |
rs2258072 | snp | A/G | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15572943 | AGCTGCCTGGGTAAA[A/G]TAGACCATAGAATCC | 374286 |
rs2258077 | snp | A/G | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15573326 | AATAGAGTAAACCCC[A/G]CAGGGAAACAGAACC | 374286 |
rs2258129 | snp | C/T | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15573362 | GAATTCTCCACCTCT[C/T]CTCTACTGAGAGTCT | 374286 |
rs2259843 | snp | A/T | 0.5 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15582003 | tttattaGTCCTTTT[A/T]CTCCTTTTTATCATT | 374286 |
rs2259879 | snp | C/T | 0.5 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15582409 | ATTAAAACAGCTAAA[C/T]TTCAACAACCTGAAT | 374286 |
rs2259880 | snp | C/T | 0.5 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15582453 | TTAAAGATTTCATGG[C/T]AAATCAAACTTAATA | 374286 |
rs2259972 | snp | A/C | 0.0433465 | 0.140692 | intron-variant | CDRT1 | GRCh38.p7 | 17:15584836 | TCAGAAACTAAACTT[A/C]CACATAAAATGGCCT | 374286 |
rs2259977 | snp | A/G | 0.0799831 | 0.183287 | intron-variant | CDRT1 | GRCh38.p7 | 17:15585262 | GTGCCATGTTGGGAA[A/G]ATAGATGGTTCCAGG | 374286 |
rs2260527 | snp | C/T | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15576050 | AACTCCAATTTTAAC[C/T]GAACTAGGAAACACA | 374286 |
rs2260987 | snp | C/T | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15586522 | ttcaaaaattttttg[C/T]accaaaataaactca | 374286 |
rs2260988 | snp | C/G | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15586584 | TATAcaaggggactt[C/G]aaaaagttcatggaa | 374286 |
rs2260991 | snp | A/G | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15586800 | TTATTTGATGCAGGA[A/G]GTTAATAGACAGTAG | 374286 |
rs2260992 | snp | A/G | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15587005 | AGCTAGAGTGAACCT[A/G]GAGCCTTGAGAAGGC | 374286 |
rs2261039 | snp | A/G | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15588199 | CATAAGTCACGTTAC[A/G]GCACTGGTACTACAC | 374286 |
rs2261040 | snp | C/T | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15588340 | TCACTAATTAAGTGA[C/T]GTCTTAATAAAGTAT | 374286 |
rs2261060 | snp | A/G | | | intron-variant, utr-variant-3-prime | CDRT1 | GRCh38.p7 | 17:15588688 | ATATTCTTTCTTATT[A/G]TAAGTTTGTTTCATA | 374286 |
rs2261061 | snp | A/G | 0.000399281 | 0.0141238 | intron-variant, utr-variant-3-prime | CDRT1 | GRCh38.p7 | 17:15588742 | ATCAGCCAGATCAGT[A/G]CTGCCTCTACTGGAT | 374286 |
rs2261062 | snp | A/G/T | 0.00954822 | 0.0685355 | intron-variant, utr-variant-3-prime | CDRT1 | GRCh38.p7 | 17:15588894 | TTGTTGTGCTGTTCC[A/G/T]GGAGTTGCCATTCTG | 374286 |
rs2270988 | snp | A/G | 0.29278 | 0.246313 | upstream-variant-2KB | CDRT1 | GRCh38.p7 | 17:15620334 | TTTAATGCAATCCTA[A/G]AAGGTAGTTATCATT | 374286 |
rs2323743 | snp | C/T | 0.00119737 | 0.0244387 | intron-variant | CDRT1 | GRCh38.p7 | 17:15571961 | gtggttactgggaaa[C/T]ggcggtggggggagg | 374286 |
rs2323744 | snp | A/G | 0.000798403 | 0.0199641 | intron-variant | CDRT1 | GRCh38.p7 | 17:15571962 | tggttactgggaaac[A/G]gcggtggggggaggg | 374286 |
rs2323745 | snp | G/T | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15571984 | gggggaggggtgcgg[G/T]ggacaggagggaatt | 374286 |
rs2323746 | snp | C/T | | | intron-variant | CDRT1 | GRCh38.p7 | 17:15571988 | gaggggtgcggggga[C/T]aggagggaattggct | 374286 |
rs2323747 | snp | C/T | 0.5 | 0 | intron-variant | CDRT1 | GRCh38.p7 | 17:15572005 | ggagggaattggcta[C/T]agaggggcataagaa | 374286 |
rs2323748 | snp | A/G | 0.00993419 | 0.0697739 | intron-variant | CDRT1 | GRCh38.p7 | 17:15572014 | tggctacagaggggc[A/G]taagaaactttttga | 374286 |
rs2323749 | snp | A/C | 0.266819 | 0.249434 | intron-variant | CDRT1 | GRCh38.p7 | 17:15578899 | ATTTTTTTCTTTTTT[A/C]TTTTATAGGCAATCT | 374286 |