DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT048011 hsa-miR-30c-5p Homo sapiens UBE2NL 389898 Homo sapiens CLASH Functional MTI (Weak) 23622248

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004499 hsa-miR-26a-1* 389898 UBE2NL gcacguUCAUUG--GU-UCUUAUcc || ||| :| |||||| agucuuAGAAACAUUACAGAAUAaa 3 17 80 104 [hg19:X:142967744-142967768:+] 0.5406 126 0 -5.54 -0.1397 MIMAT0004505 hsa-miR-32* 389898 UBE2NL uuUAUAGUGU-GUGUGAUUUAAc || |:|:: : :|||||| | aaAUCUUAUGUUUUACUAAAAUa 2 21 655 677 [hg19:X:142968319-142968341:+] 0.5457 123 0 -6.07 -0.2628 MIMAT0004506 hsa-miR-33a* 389898 UBE2NL cacUACGUGACACCUUUGUAAc || || | |||||||| gacAUAGUCU-UAGAAACAUUa 2 20 75 95 [hg19:X:142967739-142967759:+] 0.5406 149 7 -8.63 -0.9710 MIMAT0004512 hsa-miR-100* 389898 UBE2NL guaUG-GAUAUCUA--UGUUCGAAc || ||:||||| |||||||| uagACACUGUAGAUGGACAAGCUUg 2 20 491 515 [hg19:X:142968155-142968179:+] 0.5414 169 7 -24.96 -0.6274 MIMAT0004518 hsa-miR-16-2* 389898 UBE2NL auUUCGUCGUGUCAUUAUAAcc | |: :|| |||||| uuAUGUUUUACUAAAAUAUUuu 3 21 660 681 [hg19:X:142968324-142968345:+] 0.5521 124 0 -2.92 -0.2290 MIMAT0000228 hsa-miR-198 389898 UBE2NL cuuggAUAGAGGGGAGACCUgg ||| |:: |||||| uuuugUAUGGCUUGUCUGGAaa 3 18 626 647 [hg19:X:142968290-142968311:+] 0.5393 133 0 -14.61 -0.1053 MIMAT0004551 hsa-miR-30d* 389898 UBE2NL cgUCGUUUGUAGACUGACUUUc | | |::|:| ||| ||| aaAUCUUAUGUUUUACUAAAAu 2 21 655 676 [hg19:X:142968319-142968340:+] 0.5457 124 0 -4.69 -0.1167 MIMAT0004553 hsa-miR-7-1* 389898 UBE2NL auaccgucugacacuAAACAAc |||||| uuuacuaaaauauuuUUUGUUa 2 8 666 687 [hg19:X:142968330-142968351:+] 0.5521 120 6 -1.43 -0.5350 MIMAT0004554 hsa-miR-7-2* 389898 UBE2NL aauccaucugacccuAAACAAc |||||| uuuacuaaaauauuuUUUGUUa 2 8 666 687 [hg19:X:142968330-142968351:+] 0.5521 120 6 -1.43 -0.5314 MIMAT0009197 hsa-miR-205* 389898 UBE2NL cuuGAA-GUGAGGUGACUUUAg ||| :::|::||| |||| aauCUUAUGUUUUACUAAAAUa 2 19 656 677 [hg19:X:142968320-142968341:+] 0.5457 129 0 -9.15 -0.2245 MIMAT0009198 hsa-miR-224* 389898 UBE2NL acaucagUGAUCCCGUGGUAAAa :|| | | ||||||| aaaauaaGCUUGUG-ACCAUUUu 2 17 608 629 [hg19:X:142968272-142968293:+] 0.5393 146 7 -9.13 -0.4819 MIMAT0000433 hsa-miR-142-5p 389898 UBE2NL ucaucacgaaAGA-UGAAAUAc ||| ||||||| ucuauccaagUCUAACUUUAUu 2 12 469 490 [hg19:X:142968133-142968154:+] 0.5414 146 7 -6.70 -1.0063 MIMAT0004609 hsa-miR-149* 389898 UBE2NL cgUGUCGGGGGCAGGGAGGGa | ||| : ||||||||| uaAAAGCAGUGGUCCCUCCCu 2 20 231 251 [hg19:X:142967895-142967915:+] 0.5364 159 7 -28.36 -0.4851 MIMAT0004615 hsa-miR-195* 389898 UBE2NL ccucgucgugucggUUAUAAcc |||||| uuauguuuuacuaaAAUAUUuu 3 9 660 681 [hg19:X:142968324-142968345:+] 0.5521 120 0 -4.40 -0.2290 MIMAT0000683 hsa-miR-302a* 389898 UBE2NL ucguucauGUAGGUGCAAAUUCa ||||| ||||||| auuuccccCAUCCUGGUUUAAGu 2 16 262 284 [hg19:X:142967926-142967948:+] 0.5364 159 7 -15.85 -0.6180 MIMAT0004676 hsa-miR-34b 389898 UBE2NL uaccGUCACCUCAAUCACUAAc |||| | ||:|||||| ucuuCAGU-UAUUUGGUGAUUa 2 19 117 137 [hg19:X:142967781-142967801:+] 0.5398 144 6 -12.57 -0.2224 MIMAT0004681 hsa-miR-26a-2* 389898 UBE2NL cuuUGUUCAUUAGUUCUUAUcc | || | | |||||| cuuAGAAACAUUACAGAAUAaa 3 20 83 104 [hg19:X:142967747-142967768:+] 0.5398 127 0 -7.92 -0.1390 MIMAT0000725 hsa-miR-373* 389898 UBE2NL ccuuucgcggggguAAAACUCa ||||||| ucuuuauuuuauuuUUUUGAGg 2 9 342 363 [hg19:X:142968006-142968027:+] 0.5088 140 7 -8.26 -0.7967 MIMAT0000735 hsa-miR-380 389898 UBE2NL uucuacaccuggUAUAAUGUau | |||||| auagucuuagaaACAUUACAga 3 11 78 99 [hg19:X:142967742-142967763:+] 0.5406 122 0 -3.83 -0.1658 MIMAT0000735 hsa-miR-380 389898 UBE2NL uucuACACCUGGUAUA-AUGUAu || ||::| || ||||| uauuUGGUGAUUAAAUGUACAUu 2 19 125 147 [hg19:X:142967789-142967811:+] 0.5398 122 0 -8.22 -0.9006 MIMAT0004701 hsa-miR-338-5p 389898 UBE2NL gugagucgugguccuAUAACAa |||||| uaaaauauuuuuuguUAUUGU- 2 8 671 691 [hg19:X:142968335-142968355:+] 0.5521 120 6 -2.96 -0.6220 MIMAT0002813 hsa-miR-493* 389898 UBE2NL uuACUUUCGGAUGGUACAUGUu | :: | :|| ||||||| auUUGGUGAUUA-AAUGUACAu 2 21 126 146 [hg19:X:142967790-142967810:+] 0.5398 142 7 -10.37 -1.0533 MIMAT0004767 hsa-miR-193b* 389898 UBE2NL aguagagcgggagUUUUGGGgc ||||||| auuacagaauaaaAAAACCCag 3 10 92 113 [hg19:X:142967756-142967777:+] 0.5398 125 0 -9.62 -0.1109 MIMAT0002830 hsa-miR-520f 389898 UBE2NL uugggAGAUUU-UCCUUCGUGAa |:|||: | ||||||| ccuggUUUAAGUAUAAAGCACUg 2 18 273 295 [hg19:X:142967937-142967959:+] 0.5374 152 7 -12.53 -0.8621 MIMAT0002833 hsa-miR-520a-5p 389898 UBE2NL ucuuucaugaagggAGACCUc |||||| uuuuguauggcuugUCUGGAa 2 8 626 646 [hg19:X:142968290-142968310:+] 0.5393 120 6 -13.43 -0.1546 MIMAT0002838 hsa-miR-525-5p 389898 UBE2NL ucuuucacguagggAGACCUc |||||| uuuuguauggcuugUCUGGAa 2 8 626 646 [hg19:X:142968290-142968310:+] 0.5393 120 6 -10.97 -0.1561 MIMAT0002868 hsa-miR-522 389898 UBE2NL ugugagauuucCCUUGGUAAAa | :||||||| aaaauaagcuuGUGACCAUUUu 2 12 608 629 [hg19:X:142968272-142968293:+] 0.5393 143 7 -9.88 -0.5120 MIMAT0002881 hsa-miR-509-3p 389898 UBE2NL gaugggugucugcauGGUUAGu |||||| ---------auugauCCAAUCa 2 8 1 13 [hg19:X:142967665-142967677:+] 0.5415 120 6 -10.58 -0.1149 MIMAT0004785 hsa-miR-545* 389898 UBE2NL agUAGAUUAUUUGUAAAUGAcu |||| ||: |||||| aaAUCUUAUG---UUUUACUaa 3 21 655 673 [hg19:X:142968319-142968337:+] 0.5457 128 0 -7.62 -0.2453 MIMAT0003165 hsa-miR-545 389898 UBE2NL cgugUGUUAUUUACAAACGACu ||| |: : ||||||| aauaACAUUGUGACUUUGCUGu 2 19 565 586 [hg19:X:142968229-142968250:+] 0.5414 150 7 -12.20 -0.3586 MIMAT0004794 hsa-miR-551b* 389898 UBE2NL ccaGAGUGGGUGCGAAC-UAAAg :|| ::: :||||| |||| uucUUCCUUUUUGCUUGCAUUUa 2 20 49 71 [hg19:X:142967713-142967735:+] 0.5415 123 0 -15.06 -0.9254 MIMAT0003235 hsa-miR-570 389898 UBE2NL cguuucCAUUAACG--ACAAAAgc |||| | : |||||| acuucuGUAAAUCUUAUGUUUUac 3 17 647 670 [hg19:X:142968311-142968334:+] 0.5457 127 0 -5.34 -0.1803 MIMAT0003241 hsa-miR-576-5p 389898 UBE2NL uuucugcaccucuuuAAUCUUa |||||| uuaauggacauagucUUAGAAa 2 8 69 90 [hg19:X:142967733-142967754:+] 0.5406 120 6 -6.51 -0.1123 MIMAT0004797 hsa-miR-582-3p 389898 UBE2NL ccaagUCAACAAGUUGGUCAAu || | | |||||||| uuaaaAGCAGCU-AACCAGUUc 2 18 433 453 [hg19:X:142968097-142968117:+] 0.5432 147 7 -13.70 -0.6809 MIMAT0003248 hsa-miR-583 389898 UBE2NL caUUACCCUGGAAGGA-GAAAc |:||| ||| ||| |||| gcAGUGGUCCCUCCCUGCUUUu 2 20 236 257 [hg19:X:142967900-142967921:+] 0.5364 131 0 -16.29 -0.3344 MIMAT0003256 hsa-miR-589* 389898 UBE2NL agACCCUUGGCCGUAA--ACAAGACu || | |:| : | ||||||| agUGUGCAUCACUUCUCCUGUUCUGc 2 23 17 42 [hg19:X:142967681-142967706:+] 0.5415 141 7 -12.02 -0.2771 MIMAT0003274 hsa-miR-606 389898 UBE2NL uagaaacuaaaAGUCAUCAAa | ||||||| uuugaggggggUAAGUAGUUu 2 11 357 377 [hg19:X:142968021-142968041:+] 0.5045 142 7 -11.30 -0.9450 MIMAT0003284 hsa-miR-616* 389898 UBE2NL uucAGUGACUUCCCAAAACUCa |:|:| | ||||||| ucuUUAUUUUAUUUUUUUGAGg 2 20 342 363 [hg19:X:142968006-142968027:+] 0.5088 147 7 -6.60 -0.7821 MIMAT0003294 hsa-miR-625 389898 UBE2NL ccuGAUAUCUUGAAAGGGGGa :||| | |||||||| cuuUUAUUCA--UUUCCCCCa 2 19 253 271 [hg19:X:142967917-142967935:+] 0.5364 147 7 -14.91 -1.1128 MIMAT0003297 hsa-miR-628-3p 389898 UBE2NL agcUGACGGUG-AGAAUGAUcu | | ::|: |:|||||| guaAAUCUUAUGUUUUACUAaa 3 19 653 674 [hg19:X:142968317-142968338:+] 0.5457 129 0 -5.74 -0.3045 MIMAT0004810 hsa-miR-629 389898 UBE2NL ucaagaggguugcaUUUGGGu |||||| auuacagaauaaaaAAACCCa 2 8 92 112 [hg19:X:142967756-142967776:+] 0.5398 120 6 -10.40 -0.1654 MIMAT0003299 hsa-miR-630 389898 UBE2NL uggaagggaccAUGUCUUAUga ||||||||| cuuagaaacauUACAGAAUAaa 3 12 83 104 [hg19:X:142967747-142967768:+] 0.5398 135 0 -9.76 -0.1418 MIMAT0003311 hsa-miR-641 389898 UBE2NL cuccacugaGAUAGGAUACAGAAa | | :||||||||| guacauuagCAAAUCUAUGUCUUg 2 16 141 164 [hg19:X:142967805-142967828:+] 0.5398 155 7 -14.64 -0.7245 MIMAT0003326 hsa-miR-663 389898 UBE2NL cgCCAGGGCGCCGCGGGGCGGa || |:| : : ||||||| auGGGCUCCU--UUCCCCGCCu 2 21 390 409 [hg19:X:142968054-142968073:+] 0.5365 141 7 -25.35 -0.8018 MIMAT0004814 hsa-miR-654-3p 389898 UBE2NL uuccacuaccagucGUCUGUAu ||||||| agaauaaaaaaaccCAGACAUc 2 9 97 118 [hg19:X:142967761-142967782:+] 0.5398 140 7 -8.67 -0.7166 MIMAT0003333 hsa-miR-549 389898 UBE2NL ucucgaguaggUAUCAACAGu :|||||||| ugugaaugaagGUAGUUGUCa 2 11 294 314 [hg19:X:142967958-142967978:+] 0.5385 146 7 -13.41 -0.8146 MIMAT0003337 hsa-miR-659 389898 UBE2NL accccuggGAGGGACUUGGUUc :| ::|||||||| aagcuugaUUGUUUGAACCAAa 2 15 509 530 [hg19:X:142968173-142968194:+] 0.5414 150 7 -14.81 -1.0039 MIMAT0005791 hsa-miR-1264 389898 UBE2NL uuguccACGAGUUUAUUCUGAAc ||:|| : ||||||| uucuccUGUUCUGCCAAGACUUc 2 18 29 51 [hg19:X:142967693-142967715:+] 0.5415 153 7 -11.37 -0.1728 MIMAT0003883 hsa-miR-767-3p 389898 UBE2NL ucuuUGGUACCCCAUACUCGUCu ::||| | |||||||| cacuGUCAUAAAGCAUGAGCAGa 2 20 173 195 [hg19:X:142967837-142967859:+] 0.5398 155 7 -16.91 -0.7060 MIMAT0005797 hsa-miR-1301 389898 UBE2NL cuUCAGUGAGGGUCC-GUCGACGUu :|| ::| :|||| :||||||| aaGGUAGUUGUCAGGUUAGCUGCAa 2 23 302 326 [hg19:X:142967966-142967990:+] 0.5385 165 7 -27.86 -0.8140 MIMAT0004185 hsa-miR-802 389898 UBE2NL uguuccUACUUAGAAACAAUGAc || | |:|||||||:| acuaaaAU-AUUUUUUGUUAUUg 2 18 669 690 [hg19:X:142968333-142968354:+] 0.5521 143 0 -12.10 -0.2857 MIMAT0004901 hsa-miR-298 389898 UBE2NL acCCUCUUGGAGGGAC----GAAGACGa | | ::|:| :||| ||||||: uuGUAUGGCUUGUCUGGAAACUUCUGUa 2 23 628 655 [hg19:X:142968292-142968319:+] 0.5393 133 0 -16.38 -0.1766 MIMAT0004912 hsa-miR-890 389898 UBE2NL guugACUACGGAAAGGUUCAu || | :|| ||||||| aauaUGCUCUCUAUCCAAGUc 2 18 460 480 [hg19:X:142968124-142968144:+] 0.5414 157 7 -13.47 -0.9670 MIMAT0004971 hsa-miR-921 389898 UBE2NL cuuaggaccaaGACAGGGAGUGAUc ||| ||||||||| aacaagcaucaCUG-CCCUCACUAa 2 15 543 566 [hg19:X:142968207-142968230:+] 0.5414 156 7 -20.54 -0.8693 MIMAT0005576 hsa-miR-1226* 389898 UBE2NL gggguagGUCCGGACGU-ACGGGAGUg || || | || |||||||| cauuuaaCAAGCAU-CACUGCCCUCAc 2 20 538 563 [hg19:X:142968202-142968227:+] 0.5414 156 7 -23.38 -0.7329 MIMAT0005586 hsa-miR-1231 389898 UBE2NL cgucgacaggcGGGUCUGUg |||||||| gaauaaaaaaaCCCAGACAu 2 10 98 117 [hg19:X:142967762-142967781:+] 0.5398 145 7 -18.22 -0.9183 MIMAT0005913 hsa-miR-1261 389898 UBE2NL uucgguuucggaAUAGGUa |||||| aaauaugcucucUAUCCAa 2 8 459 477 [hg19:X:142968123-142968141:+] 0.5414 120 6 -8.35 -0.1026 MIMAT0005929 hsa-miR-1275 389898 UBE2NL cugucGGAGAGGGGGUg | |:||||||| uuauuCAUUUCCCCCAu 2 13 256 272 [hg19:X:142967920-142967936:+] 0.5364 148 7 -17.94 -0.8919 MIMAT0005934 hsa-miR-548p 389898 UBE2NL uuucauugacgucAAAAACGAu |||||||| caagacuucuuccUUUUUGCUu 2 10 43 64 [hg19:X:142967707-142967728:+] 0.5415 145 7 -9.14 -0.6639 MIMAT0005934 hsa-miR-548p 389898 UBE2NL uuUCAUUGACGUCAAAAACGAu | ||| :| ||||||:| uuACUAA-AAUAUUUUUUGUUa 2 21 667 687 [hg19:X:142968331-142968351:+] 0.5521 134 0 -6.78 -0.2027 MIMAT0005788 hsa-miR-513b 389898 UBE2NL uauuuacuguggagGAACACUu ||||||| cccuucaaaauaagCUUGUGAc 2 9 602 623 [hg19:X:142968266-142968287:+] 0.5393 140 7 -9.35 -0.5932 MIMAT0005952 hsa-miR-1321 389898 UBE2NL uaguguaAGUGGAGGGAc || ||||||| gcaguggUC-CCUCCCUg 2 12 236 252 [hg19:X:142967900-142967916:+] 0.5364 141 7 -20.70 -0.1717 MIMAT0007881 hsa-miR-1908 389898 UBE2NL cugguuAGCGGCAGGGGCGGc || |: |||||||| augggcUC-CUUUCCCCGCCu 2 16 390 409 [hg19:X:142968054-142968073:+] 0.5365 149 7 -20.59 -0.8018 MIMAT0009979 hsa-miR-2054 389898 UBE2NL uuauuuaauuuaaauaUAAUGUc |||||| acauagucuuagaaacAUUACAg 2 8 76 98 [hg19:X:142967740-142967762:+] 0.5406 120 6 -9.02 -0.1453 MIMAT0011778 hsa-miR-2278 389898 UBE2NL gguccguugugugugACGAGAg |||||| aguucuuuagaaauaUGCUCUc 2 8 449 470 [hg19:X:142968113-142968134:+] 0.5423 120 6 -12.90 -0.1061 MIMAT0014982 hsa-miR-3120 389898 UBE2NL acgGACAGAUGUGAACGACAc :||| || :||||||| acaUUGU-GAC-UUUGCUGUc 2 19 569 587 [hg19:X:142968233-142968251:+] 0.5414 146 7 -14.01 -0.5911 MIMAT0014989 hsa-miR-3126-5p 389898 UBE2NL acgaagacCGUAGACAGGGAGu ||| : ||||||| guuuaaaaGCAGUGGUCCCUCc 2 15 228 249 [hg19:X:142967892-142967913:+] 0.5364 150 7 -18.82 -0.2478 MIMAT0014998 hsa-miR-3133 389898 UBE2NL uaacccaaaAUU-CUCAAGAAAu ||| |||||||| aaaagcagcUAACCAGUUCUUUa 2 14 435 457 [hg19:X:142968099-142968121:+] 0.5423 148 7 -9.29 -0.8744 MIMAT0015013 hsa-miR-548u 389898 UBE2NL gcGUUUUCAUUAA--CGUC-AGAAAc :||||| |: | ||| ||||| guUAAAAGCAGCUAACCAGUUCUUUa 2 22 432 457 [hg19:X:142968096-142968121:+] 0.5423 124 0 -8.54 -0.8133 MIMAT0015016 hsa-miR-3145 389898 UBE2NL guuaagguuuGUGAGUUUUAUAGa :||| |||||||: ucuuauguuuUACU-AAAAUAUUu 2 15 658 680 [hg19:X:142968322-142968344:+] 0.5457 136 0 -7.89 -0.2340 MIMAT0015026 hsa-miR-3153 389898 UBE2NL uuuacagggaUGAGCGAAAGGGg :||| ||||||| aauuuuauggGCUC-CUUUCCCc 2 14 384 405 [hg19:X:142968048-142968069:+] 0.5297 147 7 -21.52 -0.3746 MIMAT0015037 hsa-miR-3163 389898 UBE2NL cagaauGACGGGAGUAAAAUAu :| :|:|:||||||| ggguguUUUUCUUUAUUUUAUu 2 17 333 354 [hg19:X:142967997-142968018:+] 0.5088 156 7 -11.56 -1.1338 MIMAT0015037 hsa-miR-3163 389898 UBE2NL cagaAUGACGGGAGUAAAAUAu | :| :::| ||||||| guagUUUUAUUUUAAUUUUAUg 2 19 371 392 [hg19:X:142968035-142968056:+] 0.5297 150 7 -10.39 -0.4623 MIMAT0015047 hsa-miR-3172 389898 UBE2NL auUCCUGACGUUUUGGGgu || |: ||||||| acAGAAUAAAAAAACCCag 3 18 95 113 [hg19:X:142967759-142967777:+] 0.5398 129 0 -10.36 -0.1076 MIMAT0015051 hsa-miR-3174 389898 UBE2NL ccgagaCGUAGAGAU-UGAGUGAu ||||| ||: |||||| uaacaaGCAUCACUGCCCUCACUa 2 18 542 565 [hg19:X:142968206-142968229:+] 0.5414 132 6 -20.19 -0.1012 MIMAT0015056 hsa-miR-3179 389898 UBE2NL ugCAAAUUUAAAGUGGGGAAGa || ||:| || ||||||| aaGUGUAGA-GUCCCCCCUUCa 2 21 588 608 [hg19:X:142968252-142968272:+] 0.5404 158 7 -15.90 -0.7975 MIMAT0015057 hsa-miR-3180-5p 389898 UBE2NL gcUGCACCCCGCCUCGCAGACCUUc |: | | :|| :|||||||| ccAUUUUGUAUGGCUUGUCUGGAAa 2 24 623 647 [hg19:X:142968287-142968311:+] 0.5393 155 7 -19.99 -1.0868 MIMAT0015062 hsa-miR-3182 389898 UBE2NL cugaUGUGAUGUCUUcg |||:||||||| agaaACAUUACAGAAua 3 14 86 102 [hg19:X:142967750-142967766:+] 0.5398 141 0 -14.10 -0.2501 MIMAT0015065 hsa-miR-3185 389898 UBE2NL ggcGUCUGGCUGG--CGGAAGAAGa | | :| :|| | ||||||| cucCUGUUCUGCCAAGACUUCUUCc 2 21 31 55 [hg19:X:142967695-142967719:+] 0.5415 147 7 -17.63 -0.5224 MIMAT0016868 hsa-miR-4314 389898 UBE2NL gacaggguaaaGGGUCUc |||||| gaauaaaaaaaCCCAGAc 2 8 98 115 [hg19:X:142967762-142967779:+] 0.5398 120 6 -10.39 -0.2086 MIMAT0016898 hsa-miR-4263 389898 UBE2NL ccgGUUCCGUGAAUCUUa || |: ||||||| ggaCAUAGU-CUUAGAAa 2 16 74 90 [hg19:X:142967738-142967754:+] 0.5406 141 7 -10.07 -1.1342 MIMAT0016900 hsa-miR-4270 389898 UBE2NL cgggaggggacuGAGGGACu ||||||| aagcagugguccCUCCCUGc 2 9 234 253 [hg19:X:142967898-142967917:+] 0.5364 140 7 -17.69 -0.2051 MIMAT0016908 hsa-miR-4277 389898 UBE2NL cacaUGACACGAGUCU-UGACg ||| | :|:||| |||| ucuaACUUUAUUUAGACACUGu 2 18 479 500 [hg19:X:142968143-142968164:+] 0.5414 125 0 -12.24 -0.8770 MIMAT0000076 hsa-miR-21 389898 UBE2NL aguuguagucagacUAUUCGAu ||||||| guccccccuucaaaAUAAGCUu 2 9 597 618 [hg19:X:142968261-142968282:+] 0.5393 140 7 -6.85 -0.8083 MIMAT0000084 hsa-miR-27a 389898 UBE2NL cgcCUUGAAUCGGUGACACUu | |: || |||||||| uaaGUAUAAAG-CACUGUGAa 2 19 280 299 [hg19:X:142967944-142967963:+] 0.5374 148 7 -14.99 -0.7539 MIMAT0000084 hsa-miR-27a 389898 UBE2NL cgccuUGAAUCGGUGACA-CUu |:|||| |||||| || acuuuAUUUAGACACUGUAGAu 2 17 483 504 [hg19:X:142968147-142968168:+] 0.5414 132 0 -15.06 -0.5106 MIMAT0000227 hsa-miR-197 389898 UBE2NL cgacccaccucuuccACCACUu |||||| acaucuucaguuauuUGGUGAu 2 8 114 135 [hg19:X:142967778-142967799:+] 0.5398 120 6 -7.46 -0.1134 MIMAT0000241 hsa-miR-208a 389898 UBE2NL uguucgaaaaacgagCAGAAUa |||||| cauuuaauggacauaGUCUUAg 2 8 66 87 [hg19:X:142967730-142967751:+] 0.5406 120 6 -7.91 -0.1258 MIMAT0000250 hsa-miR-139-5p 389898 UBE2NL gaccucugugcacGUGACAUCu |||||||| aacuuuauuuagaCACUGUAGa 2 10 482 503 [hg19:X:142968146-142968167:+] 0.5414 145 7 -15.76 -0.8620 MIMAT0000255 hsa-miR-34a 389898 UBE2NL ugUUGGUCGAUUCUGUGACGGu ||| ||| | ||||||| uuAACAAGC--A-UCACUGCCc 2 21 541 559 [hg19:X:142968205-142968223:+] 0.5414 147 7 -16.85 -0.8609 MIMAT0000264 hsa-miR-203 389898 UBE2NL gaucaccaGGAUUUGUA-AAGUg || |:|||| |||| uaaaaaaaCCCAGACAUCUUCAg 2 15 101 123 [hg19:X:142967765-142967787:+] 0.5398 122 0 -10.52 -0.9837 MIMAT0000266 hsa-miR-205 389898 UBE2NL gucugagGCCACCUUACUUCCu | || ||||||||| uaaagcaCUGU-GAAUGAAGGu 2 16 286 306 [hg19:X:142967950-142967970:+] 0.5374 153 7 -16.59 -0.3892 MIMAT0000281 hsa-miR-224 389898 UBE2NL uugccUUGGUG-AUCACUGAAc ||: || | ||||||| ucacuAAUAACAUUGUGACUUu 2 17 560 581 [hg19:X:142968224-142968245:+] 0.5414 151 7 -12.61 -0.6547 MIMAT0000419 hsa-miR-27b 389898 UBE2NL cgUCUUGAAUCGGUGACACUu || |: || |||||||| uaAGUAUAAAG-CACUGUGAa 2 20 280 299 [hg19:X:142967944-142967963:+] 0.5374 153 7 -15.36 -0.7539 MIMAT0000419 hsa-miR-27b 389898 UBE2NL cgucuUGAAUCGGUGACA-CUu |:|||| |||||| || acuuuAUUUAGACACUGUAGAu 2 17 483 504 [hg19:X:142968147-142968168:+] 0.5414 132 0 -15.79 -0.5106 MIMAT0000424 hsa-miR-128 389898 UBE2NL uuucucuggccaaGUGACACu ||||||| uuuaaguauaaagCACUGUGa 2 9 278 298 [hg19:X:142967942-142967962:+] 0.5374 140 7 -14.15 -1.0567 MIMAT0000448 hsa-miR-136 389898 UBE2NL agguaguAGUUUUGUUUACCUca |:: | : |||||| uuuuugcUUGCAUUUAAUGGAca 3 17 56 78 [hg19:X:142967720-142967742:+] 0.5415 124 0 -6.77 -0.1245 MIMAT0000456 hsa-miR-186 389898 UBE2NL ucggguuuuccucuuAAGAAAc |||||| aggguguggguguuuUUCUUUa 2 8 326 347 [hg19:X:142967990-142968011:+] 0.5385 120 6 -6.32 -0.1216 MIMAT0000458 hsa-miR-190 389898 UBE2NL uggauUAUAUAGUUUGUAU-AGu || || :::||||| || cuugcAUUUAAUGGACAUAGUCu 2 18 62 84 [hg19:X:142967726-142967748:+] 0.5406 121 0 -7.28 -0.9046 MIMAT0000686 hsa-miR-34c-5p 389898 UBE2NL cgUUAGUCGAUUGAUGUGACGGa | |:| | |:| ||||||| acAUUUAACAAGCAUCACUGCCc 2 22 537 559 [hg19:X:142968201-142968223:+] 0.5414 157 7 -17.00 -0.8644 MIMAT0000720 hsa-miR-376c 389898 UBE2NL ugcaccuuaaaggAGAUACAa ||||||| guacauuagcaaaUCUAUGUc 2 9 141 161 [hg19:X:142967805-142967825:+] 0.5398 140 7 -7.95 -0.9218 MIMAT0004693 hsa-miR-330-5p 389898 UBE2NL cggaUUCUGUGUCCGGGUCUcu || | | | |||||| acagAAUAAAAAAACCCAGAca 3 19 95 116 [hg19:X:142967759-142967780:+] 0.5398 130 0 -13.32 -0.2291 MIMAT0000756 hsa-miR-326 389898 UBE2NL gaccuccUUCCCGGGUCUcc || |||||| agaauaaAAAAACCCAGAca 3 14 97 116 [hg19:X:142967761-142967780:+] 0.5398 121 0 -10.23 -0.2291 MIMAT0001541 hsa-miR-449a 389898 UBE2NL ugGUCGAUUGUU-AU-GUGACGGu || :|||||| | ||||||| aaCAUUUAACAAGCAUCACUGCCc 2 21 536 559 [hg19:X:142968200-142968223:+] 0.5414 162 7 -21.46 -0.8609 MIMAT0002816 hsa-miR-494 389898 UBE2NL cuccaaagggcacAUACAAAGu |||||||: cuucuguaaaucuUAUGUUUUa 2 10 648 669 [hg19:X:142968312-142968333:+] 0.5457 129 0 -10.45 -0.1588 MIMAT0002817 hsa-miR-495 389898 UBE2NL uucuucacgugguacAAACAAa |||||| uuuacuaaaauauuuUUUGUUa 2 8 666 687 [hg19:X:142968330-142968351:+] 0.5521 120 6 -2.78 -0.5385 MIMAT0002870 hsa-miR-499-5p 389898 UBE2NL uuUGU-AGUGAC--GU-UCAGAAUu :|| |:| || || ||||||| uuGCAUUUAAUGGACAUAGUCUUAg 2 20 63 87 [hg19:X:142967727-142967751:+] 0.5406 148 7 -12.56 -1.0110 MIMAT0003258 hsa-miR-590-5p 389898 UBE2NL gacGUGAAAAUACUUAUUCGAg | | || | |||||||| uccCCCCUUCA-AAAUAAGCUu 2 20 598 618 [hg19:X:142968262-142968282:+] 0.5393 149 7 -8.32 -0.8083 MIMAT0003327 hsa-miR-449b 389898 UBE2NL cgGUCGAUUGUU-AU-GUGACGGa || :|||||| | ||||||| aaCAUUUAACAAGCAUCACUGCCc 2 21 536 559 [hg19:X:142968200-142968223:+] 0.5414 162 7 -22.03 -0.8609 MIMAT0004960 hsa-miR-208b 389898 UBE2NL uguuuggaaaacaagCAGAAUa |||||| cauuuaauggacauaGUCUUAg 2 8 66 87 [hg19:X:142967730-142967751:+] 0.5406 120 6 -7.33 -0.1258

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G051337 UBE2NL Homo sapiens 389898

DNA & RNA Element - miRWalk Gene Name miRNAname Entrez ID Pathways UBE2NL hsa-miR-30c-5p 389898 hsa04120_Ubiquitin mediated proteolysis

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile UBE2NL hsa-miR-1264 beg:32 end:51 pic:3' TTGTCCACGAGTTTATTCTGAAC 5'& ||.|| ||||||| &5' ------TGTTCTGCCAAGACTT- 3' UBE2NL hsa-miR-582-3p beg:437 end:453 pic:3' CCAAGTCAACAAGTTGGTCAAT 5'& ||| .|||||||| &5' ----CAGC----TAACCAGTT- 3' UBE2NL hsa-miR-522 beg:612 end:630 pic:3' TGTGAGATTTCCCTTGGTAAAA 5'& .||. | |||||||| &5' --GCTT-----GTGACCATTTT 3' UBE2NL hsa-miR-139-5p beg:490 end:504 pic:3' GACCTCTGTGCAC-GTGACATCT 5'& | ||||||||| &5' ------------GACACTGTAGA 3' UBE2NL hsa-miR-27a beg:286 end:300 pic:3' CGCCTTGAATCGGTGACACTT 5'& || ||||||||| &5' ---------AG-CACTGTGAA 3' UBE2NL hsa-miR-27b beg:286 end:300 pic:3' CGTCTTGAATCGGTGACACTT 5'& || ||||||||| &5' ---------AG-CACTGTGAA 3' UBE2NL hsa-miR-549 beg:302 end:315 pic:3' TCTCGAGTAGGTATCAACAGT 5'& .||||||||| &5' -----------GTAGTTGTCA 3' UBE2NL hsa-miR-205 beg:287 end:305 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& .| |.| ||||||||| &5' ---GCACTGT--GAATGAAGG- 3' UBE2NL hsa-miR-128 beg:288 end:299 pic:3' TTTCTCTGGCCAAGTGACACT 5'& |||||||| &5' -------------CACTGTGA 3' UBE2NL hsa-miR-1231 beg:106 end:117 pic:3' CGTCGACAGGCGGGTCTGTG 5'& ||||||||. &5' -----------CCCAGACAT 3' UBE2NL hsa-miR-1908 beg:390 end:409 pic:3' CTGGTTAGCGGCAGGGGCGGC 5'& |.| || |. |||||||| &5' GGC---TC-CTTTCCCCGCC- 3' UBE2NL hsa-miR-921 beg:551 end:566 pic:3' CTTAGGACCAAGACAGGGAGTGATC 5'& ||| ||||||||| &5' -----------CTG-CCCTCACTA- 3' UBE2NL hsa-miR-4263 beg:71 end:90 pic:3' CCGGTTCCGTGAATCTTA 5'& || || |. ||||||| &5' GGACATAGT-CTTAGAA- 3' UBE2NL hsa-miR-3153 beg:391 end:406 pic:3' TTTACAGGGATGAGCGAAAGGGG 5'& .||| |||||||| &5' ----------GCTC-CTTTCCCC 3' UBE2NL ebv-miR-BART14 beg:50 end:72 pic:3' TAGGGATGATGACGTCGTAAAT 5'& |||.| .|.|| ||||||| &5' -TCCTTTTTGCTT--GCATTTA 3' UBE2NL ebv-miR-BART20-3p beg:325 end:349 pic:3' CCATTGTCCGACAC--GGAAGTAC 5'& |||. || ||| .|||.|| &5' GGTGT--GGGTGTTTTTCTTTAT- 3' UBE2NL ebv-miR-BART22 beg:612 end:633 pic:3' TGATGAT--CTGGTACTGAAACATT 5'& .|| |||||| |||||| &5' ---GCTTGTGACCAT---TTTGTA- 3' UBE2NL hcmv-miR-US5-1 beg:623 end:642 pic:3' TGCGAGAGCAGTCCGAACAGT 5'& |.|.|| |||||||| &5' ----TTTTGTATGGCTTGTC- 3' UBE2NL hsa-miR-3126-5p beg:233 end:249 pic:3' ACGAAGACCGTAGACAGGGAGT 5'& ||| ||||||| &5' --------GCAGTGGTCCCTC- 3' UBE2NL hsa-miR-224 beg:567 end:581 pic:3' TTGCCTTGGTGATCACTGAAC 5'& ||.| ||||||| &5' --------CATT-GTGACTT- 3' UBE2NL hsa-miR-302astar beg:267 end:285 pic:3' TCGTTCATGTAGGTGCAAATTCA 5'& ||||| |||||||| &5' --------CATCCTGGTTTAAGT 3' UBE2NL hcmv-miR-UL22Astar beg:119 end:135 pic:3' GATGTTTGATCGTAAGACCACT 5'& ||. |.|||||| &5' ---------AGTTATTTGGTGA 3' UBE2NL hcmv-miR-UL22Astar beg:403 end:419 pic:3' GATGTTTGATCGT-AAGACCACT 5'& || ||.|||||| &5' ----------GCCTTTTTGGTGA 3' UBE2NL hcmv-miR-UL70-3p beg:263 end:276 pic:3' GGCGCGCGGTCGGGTAGGGG 5'& || |||||||. &5' -------CC--CCCATCCT- 3' UBE2NL hiv1-miR-H1 beg:233 end:253 pic:3' CGGGTCCGTGCGGAGGGACC 5'& || ||. | |||||||| &5' GCAGTGGT-C-CCTCCCTG- 3' UBE2NL hsa-miR-100star beg:494 end:516 pic:3' GTATGGATATCTA--TGTTCGAAC 5'& ||.||||| ||||||||| &5' -----CTGTAGATGGACAAGCTTG 3' UBE2NL hsa-miR-1206 beg:172 end:194 pic:3' CGAATTTGTAGA-TGTACTTGT 5'& || ||| .|||||.|| &5' -CTGT--CATAAAGCATGAGCA 3' UBE2NL hsa-miR-1250 beg:281 end:297 pic:3' TTTCCGGTGTAGGTCGTGGCA 5'& .|| |||||.|| &5' --------TATAAAGCACTGT 3' UBE2NL hsa-miR-1257 beg:245 end:265 pic:3' CCAGTCTTGGGT----AGTAAGTGA 5'& ||| |.|||||.| &5' --------CCCTGCTTTTATTCATT 3' UBE2NL hsa-miR-125b-2star beg:599 end:623 pic:3' CAGGGTTCTCGGAC-TGAACACT 5'& ||| .||||||| &5' --CCCTTCAAAATAAGCTTGTGA 3' UBE2NL hsa-miR-1261 beg:462 end:477 pic:3' TTCGGTTTCGGAATAGGTA 5'& ||. | |||||| &5' --GCT----CTCTATCCA- 3' UBE2NL hsa-miR-1265 beg:562 end:586 pic:3' TTGTTGTGA-ACTGGTGTAGGAC 5'& ||.||||.| ||||. | ||| &5' AATAACATTGTGACTT--TGCTG 3' UBE2NL hsa-miR-1282 beg:180 end:205 pic:3' TTCGT-CTT-TTTCCG-TTTGCT 5'& ||||| ||. |.|||| |.||| &5' AAGCATGAGCAGAGGCTAGACG- 3' UBE2NL hsa-miR-1286 beg:19 end:43 pic:3' TCCCG-AGT--AGAAC-CAGGACGT 5'& || ||| ||| ||.|||| &5' ---GCATCACTTCTCCTGTTCTGC- 3' UBE2NL hsa-miR-1286 beg:146 end:166 pic:3' TCCCGAGTAGAACCAGGACGT 5'& || |||| |||.||. &5' ---GCAAATCTATGTCTTGT- 3' UBE2NL hsa-miR-1289 beg:384 end:399 pic:3' TTTTACGTCTAAGGACCTGAGGT 5'& ||. |||.|||| &5' ----------TTTATGGGCTCC- 3' UBE2NL hsa-miR-1298 beg:287 end:304 pic:3' ATGTAGACCTGTCGGCTTACTT 5'& .|| ||| .||||||| &5' -GCA-CTG------TGAATGAA 3' UBE2NL hsa-miR-1301 beg:306 end:327 pic:3' CTTCAGTGAGGGTCC-GTCGACGTT 5'& .| .|||| .|||||||| &5' -------TTGTCAGGTTAGCTGCAA 3' UBE2NL hsa-miR-1324 beg:626 end:645 pic:3' CTTTCACGTATCTTAAGACAGACC 5'& ||.||.| .||||||| &5' -----TGTATGGC---TTGTCTGG 3' UBE2NL hsa-miR-142-3p beg:74 end:98 pic:3' AGGTATTTCATCCTTTGTGATGT 5'& ||||. | ||||||.|||| &5' --CATAGTCTTAGAAACATTACA 3' UBE2NL hsa-miR-142-5p beg:331 end:354 pic:3' TCATCACGAAAG---ATGAAATAC 5'& .|||.|||. ||.||||| &5' ---GGTGTTTTTCTTTATTTTAT- 3' UBE2NL hsa-miR-143 beg:247 end:267 pic:3' CTCGATGTCACGAAGTAGAGT 5'& ||.| |||||.|| &5' ---CTGCTTTTATTCATTTC- 3' UBE2NL hsa-miR-146a beg:445 end:456 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |||||||. &5' -------------CAGTTCTT- 3' UBE2NL hsa-miR-146b-5p beg:435 end:456 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& ||| |||||||. &5' AGCAGCTAAC---CAGTTCTT- 3' UBE2NL hsa-miR-15astar beg:621 end:640 pic:3' ACTCCGTCGTGT--TATACCGGAC 5'& ||. .||||||.|| &5' --------CATTTTGTATGGCTTG 3' UBE2NL hsa-miR-1908 beg:234 end:255 pic:3' CTGGTTAGC-GGCAGGGGCGGC 5'& ||.| | || ||||.||. &5' ---CAGTGGTCCCTCCCTGCT- 3' UBE2NL hsa-miR-1909 beg:236 end:254 pic:3' GCCACTCGTGGGCCGGGGACGC 5'& ||| |. ||| .|||||| &5' --GTG-GT-CCC--TCCCTGC- 3' UBE2NL hsa-miR-193bstar beg:546 end:571 pic:3' AGTAGA-GCGGGAGTT-TTGGGGC 5'& |||| .||||||| ||. | &5' -CATCACTGCCCTCACTAATAAC- 3' UBE2NL hsa-miR-19a beg:621 end:641 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& || |||||.||.| |||. &5' -CA-TTTTGTATGGC-TTGT--- 3' UBE2NL hsa-miR-218-1star beg:509 end:529 pic:3' GGTACCACGAACTGC----CTTGGTA 5'& ||||||. |||||| &5' -------GCTTGATTGTTTGAACCA- 3' UBE2NL hsa-miR-2278 beg:238 end:258 pic:3' GGTCCGTTGTGTGTGACGAGAG 5'& ||. | | | |||||.|. &5' ---GGTCCCTC-C-CTGCTTTT 3' UBE2NL hsa-miR-26a beg:507 end:526 pic:3' TCGGATAGGACCTAATGAACTT 5'& |||.| ||||..||||| &5' AGCTT------GATTGTTTGAA 3' UBE2NL hsa-miR-28-5p beg:379 end:401 pic:3' GAGTTATCTGACACTCGAGGAA 5'& |.||| .| ||.||||||| &5' -TTAATT--TTATGGGCTCCTT 3' UBE2NL hsa-miR-2909 beg:154 end:172 pic:3' GGTTCTCTACAAC-CGGGATTG 5'& |||| |.|||.|. &5' -------ATGTCTTGTCCTGAT 3' UBE2NL hsa-miR-3121 beg:471 end:493 pic:3' ACAGGAAACGGA-TGAGATAAAT 5'& ||| |.|| |||.|||||| &5' --TCCAA-GTCTAACTTTATTTA 3' UBE2NL hsa-miR-3127 beg:151 end:172 pic:3' GAAGGGTAAGGTGTTCGGGACTA 5'& ||. ||. |.|||||| &5' --TCTATGTCTT---GTCCTGAT 3' UBE2NL hsa-miR-3129 beg:442 end:467 pic:3' TTTGGTT-AGAGATGTGATGACG 5'& |||||. |||.|| | ||| &5' -AACCAGTTCTTTAGAAATATGC 3' UBE2NL hsa-miR-3132 beg:462 end:477 pic:3' AGGAGACTCGAGGAAGAGATGGGT 5'& || ||||||.||| &5' --------GC----TCTCTATCCA 3' UBE2NL hsa-miR-3136 beg:105 end:127 pic:3' TTACTGGGA-TGGATAAGTCAGTC 5'& |||| || ||||||.| &5' ----ACCCAGACATCTTCAGTTA- 3' UBE2NL hsa-miR-3141 beg:256 end:276 pic:3' AGGAGGAGGTGGGCGGGAG 5'& |.| ..||| ||| ||| &5' TTCATTTCC-CCCATCCT- 3' UBE2NL hsa-miR-3154 beg:36 end:62 pic:3' AGACGAGG---GTTGAGGGGAAGAC 5'& ||||| | | ||.||.||.|| &5' TCTGC-CAAGACTTCTTCCTTTTTG 3' UBE2NL hsa-miR-3162 beg:398 end:424 pic:3' GAGGGGTGGGAAGATGAG-GGATT 5'& |||||.||.||.|. | .|||| &5' -TCCCCGCCTTTTTGGTGATCTAA 3' UBE2NL hsa-miR-3169 beg:439 end:455 pic:3' GATACACGGTTCGTGTCAGGAT 5'& ||.|| | ||||.|| &5' ------GCTAA-C-CAGTTCT- 3' UBE2NL hsa-miR-3173 beg:35 end:59 pic:3' ACCGGACGGA--TAAAGGAGGAAA 5'& | ||||| | |||.|||||| &5' -GTTCTGCCAAGACTTCTTCCTTT 3' UBE2NL hsa-miR-3174 beg:545 end:566 pic:3' CCGAGACGTAGAGATT-GAGTGAT 5'& ||||| ||. ||||||| &5' ------GCATCACTGCCCTCACTA 3' UBE2NL hsa-miR-3174 beg:146 end:178 pic:3' CCG---AGACGTAGA----GATTGAGTGAT 5'& || ||| .||| ||.|.|||||. &5' -GCAAATCTATGTCTTGTCCTGATTCACTG 3' UBE2NL hsa-miR-3179 beg:587 end:608 pic:3' TGCAAATTTAAAGTGGGGAAGA 5'& || ||.| || ||||||| &5' --GTGTAGAG-TCCCCCCTTC- 3' UBE2NL hsa-miR-3180-5p beg:627 end:647 pic:3' GCTGCACCCCGCCTCGCAGACCTTC 5'& || ||| .|||||||| &5' ----GTATGGCT---TGTCTGGAA- 3' UBE2NL hsa-miR-3184 beg:585 end:609 pic:3' TTTTCGAG-C-CAGACTCCGGGGAGT 5'& |||. | ||| |||.||| &5' --AAGTGTAGAGTCCC---CCCTTCA 3' UBE2NL hsa-miR-33astar beg:210 end:231 pic:3' CACTACGTGAC-AC-CTTTGTAAC 5'& | |.|| || |||||.|| &5' -----GGATTGTTGTGAAACGTT- 3' UBE2NL hsa-miR-33astar beg:519 end:542 pic:3' CACTACGTGACACCTTTGTAAC 5'& ||| || |||.|||||| &5' -TGAACCAAAATGGGAACATT- 3' UBE2NL hsa-miR-34a beg:539 end:559 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& .||| ||| ||||||| &5' -TAACAAGCAT---CACTGCC- 3' UBE2NL hsa-miR-34b beg:118 end:137 pic:3' TACCGTCACCTCAATCACTAAC 5'& |||| ||.|||||| &5' ----CAGTTAT-TTGGTGATT- 3' UBE2NL hsa-miR-34c-5p beg:539 end:559 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& .|| ||| ||||||| &5' -TAACAAGCAT----CACTGCC- 3' UBE2NL hsa-miR-362-5p beg:311 end:331 pic:3' TGAGTGTGGATCCAAG----GTTCCTAA 5'& ||||| |||||.| &5' ----------AGGTTAGCTGCAAGGGT- 3' UBE2NL hsa-miR-365star beg:588 end:602 pic:3' TGTCGACGGGGAC-TTTCAGGGA 5'& || |.|||||| &5' -----------TGTAGAGTCCC- 3' UBE2NL hsa-miR-4271 beg:260 end:271 pic:3' GGGGTGGAAAAGAAGGGGG 5'& .||||||| &5' -----------TTTCCCCC 3' UBE2NL hsa-miR-4271 beg:35 end:56 pic:3' GGGGTGGAAAAGAAGGGGG 5'& .| || ||||..|| &5' -TCTGCCAAGACTTCTTCC 3' UBE2NL hsa-miR-4273 beg:523 end:541 pic:3' GACAGGTAGT-CTCTTGTG 5'& ||| |.|||||. &5' ----CCAAAATGGGAACAT 3' UBE2NL hsa-miR-4297 beg:288 end:308 pic:3' GTGT--CTGTCCTTCCGT 5'& ||| || |||||.| &5' CACTGTGAAT-GAAGGTA 3' UBE2NL hsa-miR-4307 beg:72 end:95 pic:3' CCTTTGTCCT--TTTTTGTAA 5'& ||| |.|| |.||||||| &5' GGACATAGTCTTAGAAACATT 3' UBE2NL hsa-miR-4320 beg:579 end:602 pic:3' TCCTTCGAT-------GTCTTAGGG 5'& |||. .|||.|||| &5' -----GCTGTCAAGTGTAGAGTCCC 3' UBE2NL hsa-miR-4323 beg:318 end:340 pic:3' AGAC--TCCGACACCC-CGAC 5'& ||| ||| |||||| |.| &5' -CTGCAAGGGTGTGGGTGTT- 3' UBE2NL hsa-miR-4325 beg:577 end:596 pic:3' AGTGACTCTGTTCACGTT 5'& | ||| ||||||.|. &5' TTGCTGT--CAAGTGTAG 3' UBE2NL hsa-miR-4329 beg:70 end:88 pic:3' CACCTTGATCCCAGAGTCC 5'& |||| || ||||.|| &5' -TGGACATA--GTCTTAG- 3' UBE2NL hsa-miR-449a beg:164 end:181 pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||.|. |||||.|| &5' -----CTGATT---CACTGTCA 3' UBE2NL hsa-miR-449a beg:538 end:559 pic:3' TGGTCGATTGTTAT--GTGACGGT 5'& .|||||| ||||||| &5' -----TTAACAAGCATCACTGCC- 3' UBE2NL hsa-miR-449b beg:538 end:559 pic:3' CGGTCGATTGTTAT--GTGACGGA 5'& .|||||| ||||||| &5' -----TTAACAAGCATCACTGCC- 3' UBE2NL hsa-miR-449cstar beg:137 end:153 pic:3' TGTCTCTCCTCACGT-TGATCGTT 5'& ||.| |.|||||| &5' -----------TGTACATTAGCAA 3' UBE2NL hsa-miR-452star beg:495 end:507 pic:3' GTGAATGAAGAAACGTCTACTC 5'& ||.|||||. &5' ------------TGTAGATGG- 3' UBE2NL hsa-miR-488star beg:630 end:645 pic:3' AACTCTCACGGTAATAGACCC 5'& || | ||.||||| &5' -------TGGC-TTGTCTGG- 3' UBE2NL hsa-miR-513a-5p beg:236 end:253 pic:3' TACTGTGGAGGGACACTT 5'& .||. |||||||| &5' GTGGTCCCTCCCTG---- 3' UBE2NL hsa-miR-516a-3p beg:287 end:305 pic:3' TGGGAGACTTTCCTTCGT 5'& .| || |||| |||| &5' GCACTGTGAAT-GAAG-- 3' UBE2NL hsa-miR-516bstar beg:287 end:305 pic:3' TGGGAGACTTTCCTTCGT 5'& .| || |||| |||| &5' GCACTGTGAAT-GAAG-- 3' UBE2NL hsa-miR-519c-3p beg:447 end:470 pic:3' TAGGAGATTTTTCTACGTGAAA 5'& .|.||.||.||| |||| || &5' GTTCTTTAGAAATATGCTCT-- 3' UBE2NL hsa-miR-520a-5p beg:627 end:646 pic:3' TCTTTCATGAAGGG-AGACCTC 5'& |||. |.. |||||| &5' -----GTATGGCTTGTCTGGA- 3' UBE2NL hsa-miR-525-5p beg:626 end:646 pic:3' TCTTTCACGTA---GGGAGACCTC 5'& ||.|| .. |||||| &5' ------TGTATGGCTTGTCTGGA- 3' UBE2NL hsa-miR-542-3p beg:172 end:183 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||||||.| &5' --------------CTGTCATA 3' UBE2NL hsa-miR-548m beg:101 end:121 pic:3' GTTTTTGGTGTTTATGGAAAC 5'& ||||||| ||.| |.||| &5' -AAAAACC-CAGACATCTT-- 3' UBE2NL hsa-miR-570 beg:324 end:343 pic:3' CGTTTCCATTAACGACAAAAGC 5'& ||.|||. | ||||||. &5' --AAGGGTGTG-GGTGTTTTT- 3' UBE2NL hsa-miR-571 beg:492 end:515 pic:3' GAGTGA-GTCTACCGG-TTGAGT 5'& |||| .|||||| |.||. &5' --CACTGTAGATGGACAAGCTT- 3' UBE2NL hsa-miR-577 beg:363 end:383 pic:3' GTCCATGGTTATAAAATAGAT 5'& .|||| .||||||.| &5' -GGGTAAGTA-GTTTTATTT- 3' UBE2NL hsa-miR-583 beg:43 end:62 pic:3' CATTACCCTG--GAAGGAGAAAC 5'& ||| ||||||.|||| &5' -------GACTTCTTCCTTTTTG 3' UBE2NL hsa-miR-593 beg:180 end:199 pic:3' TCTTTGGGGTCGTCTCTGT 5'& ||.| . |||||||.| &5' --AAGCATGAGCAGAGGC- 3' UBE2NL hsa-miR-625 beg:249 end:271 pic:3' CCTGATATCTTG-AAAGGGGGA 5'& .|| |||||||| &5' --GCTTTTATTCATTTCCCCC- 3' UBE2NL hsa-miR-641 beg:646 end:669 pic:3' CTCCACTGAGA----TAGGATACAGAAA 5'& .||| |||.|||||.|| &5' -------TTCTGTAAATCTTATGTTTT- 3' UBE2NL hsa-miR-642 beg:353 end:368 pic:3' GTTCTGTGTAAACCTCTCCCTG 5'& ||| |||.|||. &5' ---------TTTTGAGGGGGG- 3' UBE2NL hsa-miR-647 beg:436 end:446 pic:3' CTTCCTTCACTCACGTCGGTG 5'& |||||.| &5' -------------GCAGCTA- 3' UBE2NL hsa-miR-708 beg:388 end:401 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |..||||||| &5' -------------TGGGCTCCTT 3' UBE2NL hsa-miR-802 beg:676 end:690 pic:3' TGTTCCTACTTAGAAACAATGAC 5'& |.|||||||.|| &5' -----------TTTTTGTTATTG 3' UBE2NL hsa-miR-890 beg:460 end:478 pic:3' GTTGACTACG-GAA--AGGTTCAT 5'& |||| || ||||||| &5' ------ATGCTCTCTATCCAAGT- 3' UBE2NL hsa-miR-892a beg:62 end:83 pic:3' GATGCGTCTTT--CCTGTGTCAC 5'& ||| |||||.||| &5' ----GCATTTAATGGACATAGT- 3' UBE2NL hsa-miR-924 beg:194 end:218 pic:3' CGTTCTG--TAGTGT-TCTGAGA 5'& || |||| ||||. .||.| &5' GCTAGACGTATCATCCGGATT-- 3' UBE2NL hsa-miR-92a-2star beg:264 end:275 pic:3' CATTACGTTGTTTAGGGGTGGG 5'& |||||.|| &5' --------------CCCCATCC 3' UBE2NL hsv1-miR-H7 beg:30 end:54 pic:3' GGAAACCAACG--TCTGGGGAAA 5'& ||| ||| ||||..||| &5' CCTGTTC-TGCCAAGACTTCTT- 3' UBE2NL hsv2-miR-H20 beg:516 end:529 pic:3' TCTTTCCCCAGGCATTGGTTT 5'& ||..| |||||| &5' --------GTTTG-AACCAA- 3' UBE2NL hsv2-miR-H7-5p beg:30 end:54 pic:3' GGAAACCAATGC--CTGGGGAAA 5'& ||| |.| |||..||| &5' CCTGTTC-TGCCAAGACTTCTT- 3' UBE2NL kshv-miR-K12-1 beg:635 end:657 pic:3' CGAATGTGGGTCAA--AGGACATTA 5'& . | | |.|||||| &5' -----TGTCTGGAAACTTCTGTAA- 3' UBE2NL kshv-miR-K12-12star beg:389 end:406 pic:3' AGTTGGTCCCGTGGGAGGGGGT 5'& |||| ||.|.|||| &5' -------GGGCTCCTTTCCCC- 3' UBE2NL mcv-miR-M1-5p beg:37 end:56 pic:3' TCACATGGATCTTTAAGAAGGT 5'& |.|| ||| ||||||| &5' ----TGCCAAGAC-TTCTTCC- 3' UBE2NL sv40-miR-S1-5p beg:587 end:609 pic:3' TTCCGAGTAA-AGTCCGGGGAGT 5'& |. .| || |||.||| &5' ---GTGTAGAGTCCC-CCCTTCA 3'

DNA & RNA Element - SomamiR Gene Name Mutation Mutation ID miR ID Chromosome Location Ref Alt mirsite mirseed Seed Class Sample Name Cancer Type UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-143-3p chrX 143885218 T C taaATCTCAtgtttt UGAGAUGA m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-208a-3p chrX 143885218 T C taaaTCTTATgtttt AUAAGACG m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-208b-3p chrX 143885218 T C taaaTCTTATgtttt AUAAGACG m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-3672 chrX 143885218 T C taaaTCTCATgtttt AUGAGACU m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-376c-3p chrX 143885218 T C taaatctTATGTTtt AACAUAGA m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-4699-5p chrX 143885218 T C taAATCTTatgtttt AGAAGAUU m6c RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-4712-3p chrX 143885218 T C taaaTCTCATgtttt AAUGAGAG m6b RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-4770 chrX 143885218 T C taaATCTCAtgtttt UGAGAUGA m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-4803 chrX 143885218 T C taaatcTTATGTTtt UAACAUAA m7b RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-5186 chrX 143885218 T C taAATCTCatgtttt AGAGAUUG m6b RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-143-3p chrX 143885218 T C taaATCTCAtgtttt UGAGAUGA m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-208a-3p chrX 143885218 T C taaaTCTTATgtttt AUAAGACG m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-208b-3p chrX 143885218 T C taaaTCTTATgtttt AUAAGACG m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-3672 chrX 143885218 T C taaaTCTCATgtttt AUGAGACU m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-376c-3p chrX 143885218 T C taaatctTATGTTtt AACAUAGA m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-4699-5p chrX 143885218 T C taAATCTTatgtttt AGAAGAUU m6c RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-4712-3p chrX 143885218 T C taaaTCTCATgtttt AAUGAGAG m6b RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-4770 chrX 143885218 T C taaATCTCAtgtttt UGAGAUGA m6a RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-4803 chrX 143885218 T C taaatcTTATGTTtt UAACAUAA m7b RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143885218T>C COSN2346834 hsa-miR-5186 chrX 143885218 T C taAATCTCatgtttt AGAGAUUG m6b RK180_C02 [liver][NS][carcinoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-153-5p chrX 143884284 G A tgcagAAAAATaccc UCAUUUUU m6c YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-22-5p chrX 143884284 G A tgcaGAAGAAtaccc AGUUCUUC m6c YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-26a-1-3p chrX 143884284 G A tgcagaAGAATAccc CCUAUUCU m6c YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-26a-2-3p chrX 143884284 G A tgcagaAGAATAccc CCUAUUCU m6c YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-3182 chrX 143884284 G A tgCAGAAGaataccc GCUUCUGU m6b YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-335-3p chrX 143884284 G A tgcaGAAAAAtaccc UUUUUCAU m6a YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-4659a-3p chrX 143884284 G A tgcAGAAGAAtaccc UUUCUUCU m7b YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-4659b-3p chrX 143884284 G A tgcAGAAGAAtaccc UUUCUUCU m7b YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-4743-3p chrX 143884284 G A tgCAGAAAaataccc UUUCUGUC m6a YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-4778-3p chrX 143884284 G A tgcaGAAGAAtaccc UCUUCUUC m6c YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-627-3p chrX 143884284 G A tgcAGAAAAataccc UCUUUUCU m6c YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-630 chrX 143884284 G A tgcagaAGAATACcc AGUAUUCU m7b YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-6738-3p chrX 143884284 G A tGCAGAAGaataccc CUUCUGCC m7a YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-6740-3p chrX 143884284 G A tgcAGAAGAataccc UGUCUUCU m6c YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-6875-3p chrX 143884284 G A tgcaGAAGAATaccc AUUCUUCC m7a YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884284G>A COSM1715715 hsa-miR-942-5p chrX 143884284 G A tgcAGAAGAataccc UCUUCUCU m6a YUAKER [skin][NS][malignant_melanoma][NS] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-1225-5p chrX 143884290 C G agaaTACCCAatggc GUGGGUAC m6b SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-1229-5p chrX 143884290 C G agaaTACCCAatggc GUGGGUAG m6b SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-25-3p chrX 143884290 C G agaatacGCAATGgc CAUUGCAC m6a SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-3132 chrX 143884290 C G agaaTACCCAatggc UGGGUAGA m6a SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-4317 chrX 143884290 C G agaatacGCAATGgc ACAUUGCC m6b SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-450a-1-3p chrX 143884290 C G agaataCCCAATggc AUUGGGAA m6a SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-450a-2-3p chrX 143884290 C G agaataCCCAATggc AUUGGGGA m6a SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-4678 chrX 143884290 C G agAATACCcaatggc AAGGUAUU m6c SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-503-3p chrX 143884290 C G agAATACCCaatggc GGGGUAUU m7b SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-5681b chrX 143884290 C G agAATACCcaatggc AGGUAUUG m6b SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-6839-3p chrX 143884290 C G agaatACCCAAtggc UUGGGUUU m6a SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884290C>G COSM3737819 hsa-miR-6861-5p chrX 143884290 C G agaaTACCCAatggc ACUGGGUA m6c SJRHB059R [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-1587 chrX 143884299 G A aatggCAGCCCctaa UUGGGCUG m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-185-3p chrX 143884299 G A aatggCAGCCCCTaa AGGGGCUG m8a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-1914-3p chrX 143884299 G A aatggcaACCCCTaa GGAGGGGU m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-192-3p chrX 143884299 G A aaTGGCAGcccctaa CUGCCAAU m6a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-193b-5p chrX 143884299 G A aatggcAACCCCtaa CGGGGUUU m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-22-3p chrX 143884299 G A aatGGCAGCccctaa AAGCUGCC m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-23a-5p chrX 143884299 G A aatggcAACCCCtaa GGGGUUCC m6a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-296-3p chrX 143884299 G A aatggCAACCCctaa GAGGGUUG m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-3064-3p chrX 143884299 G A aaTGGCAAcccctaa UUGCCACA m6a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-3170 chrX 143884299 G A aatggcAACCCCtaa CUGGGGUU m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-3184-5p chrX 143884299 G A aatggcaGCCCCTaa UGAGGGGC m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-342-5p chrX 143884299 G A aatggcaACCCCTaa AGGGGUGC m6a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-3620-5p chrX 143884299 G A aatggCAGCCCctaa GUGGGCUG m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-3936 chrX 143884299 G A aatggcaACCCCTaa UAAGGGGU m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-3940-5p chrX 143884299 G A aatggCAACCCctaa GUGGGUUG m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-3972 chrX 143884299 G A aaTGGCAGcccctaa CUGCCAGC m6a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-423-5p chrX 143884299 G A aatggcaGCCCCTaa UGAGGGGC m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4283 chrX 143884299 G A aatggcAGCCCCtaa UGGGGCUC m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4423-5p chrX 143884299 G A aatGGCAACccctaa AGUUGCCU m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4446-3p chrX 143884299 G A aatggCAGCCCctaa CAGGGCUG m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4489 chrX 143884299 G A aatggcAGCCCCtaa UGGGGCUA m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4492 chrX 143884299 G A aatggCAGCCCCtaa GGGGCUGG m7a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4498 chrX 143884299 G A aatggCAGCCCctaa UGGGCUGG m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4507 chrX 143884299 G A aatggCAACCCctaa CUGGGUUG m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4508 chrX 143884299 G A aatggcAGCCCCtaa GCGGGGCU m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4656 chrX 143884299 G A aatggCAGCCCctaa UGGGCUGA m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4659a-5p chrX 143884299 G A aATGGCAGcccctaa CUGCCAUG m7a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4675 chrX 143884299 G A aatggCAGCCCCtaa GGGGCUGU m7a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4688 chrX 143884299 G A aatggcaGCCCCTAa UAGGGGCA m7a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-4741 chrX 143884299 G A aatggCAGCCCctaa CGGGCUGU m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-5001-5p chrX 143884299 G A aatggCAGCCCctaa AGGGCUGG m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-5006-5p chrX 143884299 G A aaTGGCAAcccctaa UUGCCAGG m6a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-5194 chrX 143884299 G A aatggcaACCCCTaa UGAGGGGU m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-5590-5p chrX 143884299 G A aATGGCAAcccctaa UUGCCAUA m7a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-5787 chrX 143884299 G A aatggCAGCCCctaa GGGCUGGG m6a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-604 chrX 143884299 G A aatgGCAGCCcctaa AGGCUGCG m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-608 chrX 143884299 G A aatggcaACCCCTaa AGGGGUGG m6a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6085 chrX 143884299 G A aatggcAGCCCCTaa AAGGGGCU m7b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-647 chrX 143884299 G A aatgGCAGCCcctaa GUGGCUGC m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6501-5p chrX 143884299 G A aaTGGCAACccctaa AGUUGCCA m7b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-656-5p chrX 143884299 G A aatGGCAACCcctaa AGGUUGCC m7b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6727-3p chrX 143884299 G A aaTGGCAGcccctaa UCCUGCCA m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6738-5p chrX 143884299 G A aatggcaACCCCTaa CGAGGGGU m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6743-5p chrX 143884299 G A aatggcaGCCCCTaa AAGGGGCA m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6747-5p chrX 143884299 G A aatggcaACCCCTaa AGGGGUGU m6a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6762-3p chrX 143884299 G A aatgGCAGCCcctaa UGGCUGCU m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6782-5p chrX 143884299 G A aatggcaACCCCTAa UAGGGGUG m7a S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6789-5p chrX 143884299 G A aatggcaGCCCCTAa GUAGGGGC m7b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6813-5p chrX 143884299 G A aatggcAGCCCCTaa CAGGGGCU m7b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6817-5p chrX 143884299 G A aATGGCAGcccctaa UCUGCCAU m7b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6829-5p chrX 143884299 G A aatgGCAGCCCctaa UGGGCUGC m7b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6846-5p chrX 143884299 G A aatggcAGCCCCtaa UGGGGGCU m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6848-5p chrX 143884299 G A aatggcAGCCCCtaa UGGGGGCU m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6855-5p chrX 143884299 G A aatggcAACCCCtaa UUGGGGUU m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-6882-3p chrX 143884299 G A aatGGCAGCccctaa UGCUGCCU m6b S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-744-3p chrX 143884299 G A aatGGCAACccctaa CUGUUGCC m6c S01494 [lung][NS][carcinoma][small_cell_carcinoma] UBE2NL chrX:g.143884299G>A COSM316328 hsa-miR-762 chrX 143884299 G A aatggCAGCCCCtaa GGGGCUGG m7a S01494 [lung][NS][carcinoma][small_cell_carcinoma]

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region UBE2NL High_conserved miR-133abc chrX:142967427 7-mer-A1 31 CDS UBE2NL High_conserved miR-135ab/135a-5p chrX:142967616 7-mer-m8 29 CDS UBE2NL High_conserved miR-139-5p chrX:142968167 8-mer 16 3pUTR UBE2NL High_conserved miR-205/205ab chrX:142967970 7-mer-m8 22 3pUTR UBE2NL High_conserved miR-21/590-5p chrX:142968282 7-mer-m8 4 3pUTR UBE2NL High_conserved miR-22/22-3p chrX:142968109 7-mer-A1 22 3pUTR UBE2NL High_conserved miR-27abc/27a-3p chrX:142967963 8-mer 22 3pUTR UBE2NL High_conserved miR-34ac/34bc-5p/449abc/449c-5p chrX:142968223 7-mer-m8 4 3pUTR UBE2NL High_conserved miR-425/425-5p/489 chrX:142967846 7-mer-A1 11 3pUTR UBE2NL High_conserved miR-128/128ab chrX:142967962 8-mer 22 3pUTR UBE2NL High_conserved miR-490-3p chrX:142967983 7-mer-A1 11 3pUTR UBE2NL High_conserved miR-499-5p chrX:142967751 7-mer-m8 20 3pUTR UBE2NL Medium_conserved miR-544/544ab/544-3p chrX:142967386 7-mer-m8 9 CDS UBE2NL Medium_conserved miR-873 chrX:142967267 7-mer-m8 18 CDS UBE2NL Medium_conserved miR-149 chrX:142967261 7-mer-m8 16 CDS UBE2NL Medium_conserved miR-186 chrX:142968011 7-mer-A1 16 3pUTR UBE2NL Medium_conserved miR-186 chrX:142968121 7-mer-A1 18 3pUTR UBE2NL Medium_conserved miR-224 chrX:142968245 7-mer-m8 20 3pUTR UBE2NL Medium_conserved miR-376c/741-5p chrX:142967825 7-mer-m8 18 3pUTR UBE2NL Medium_conserved miR-491-5p chrX:142967221 7-mer-A1 9 CDS UBE2NL Medium_conserved miR-495/1192 chrX:142968351 7-mer-A1 24 3pUTR

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score UBE2NL RAID00072777 hsa-miR-224-5p miRNA MIMAT0000281 UBE2NL mRNA 389898 Prediction 0.2202 UBE2NL RAID00176392 hsa-miR-3613-3p miRNA MIMAT0017991 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID00426317 hsa-miR-4744 miRNA MIMAT0019875 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID00434999 hsa-miR-495-3p miRNA MIMAT0002817 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID00579291 hsa-miR-659-3p miRNA MIMAT0003337 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID00620263 hsa-miR-6787-5p miRNA MIMAT0027474 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID00640560 hsa-miR-4436a miRNA MIMAT0018952 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID00797459 hsa-miR-205-5p miRNA MIMAT0000266 UBE2NL mRNA 389898 Prediction 0.2202 UBE2NL RAID00868922 hsa-miR-449b-5p miRNA MIMAT0003327 UBE2NL mRNA 389898 Prediction 0.2202 UBE2NL RAID00900582 hsa-miR-208b-3p miRNA MIMAT0004960 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID00997892 hsa-miR-4778-5p miRNA MIMAT0019936 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01003239 hsa-miR-34a-5p miRNA MIMAT0000255 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01144609 hsa-miR-27a-3p miRNA MIMAT0000084 UBE2NL mRNA 389898 Prediction 0.2202 UBE2NL RAID01144716 hsa-miR-449a miRNA MIMAT0001541 UBE2NL mRNA 389898 Prediction 0.2202 UBE2NL RAID01172757 hsa-miR-4768-3p miRNA MIMAT0019921 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01181749 hsa-miR-330-5p miRNA MIMAT0004693 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01307016 hsa-miR-625-5p miRNA MIMAT0003294 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01483056 hsa-miR-499a-5p miRNA MIMAT0002870 UBE2NL mRNA 389898 Prediction 0.2202 UBE2NL RAID01484866 hsa-miR-4263 miRNA MIMAT0016898 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01592938 hsa-miR-663a miRNA MIMAT0003326 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01675548 hsa-miR-30c-5p miRNA MIMAT0000244 UBE2NL mRNA 389898 CLASH 0.5483 UBE2NL RAID01680144 hsa-miR-186-5p miRNA MIMAT0000456 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01747987 hsa-miR-4706 miRNA MIMAT0019806 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01948149 hsa-miR-216b-3p miRNA MIMAT0026721 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID01951867 hsa-miR-190a-5p miRNA MIMAT0000458 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02012091 hsa-miR-5000-3p miRNA MIMAT0021020 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02058629 hsa-miR-136-5p miRNA MIMAT0000448 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02107764 hsa-miR-4799-5p miRNA MIMAT0019976 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02292450 hsa-miR-452-3p miRNA MIMAT0001636 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02316675 hsa-miR-4665-5p miRNA MIMAT0019739 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02323949 hsa-miR-34c-5p miRNA MIMAT0000686 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02388881 hsa-miR-139-5p miRNA MIMAT0000250 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02562938 hsa-miR-197-3p miRNA MIMAT0000227 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02609952 hsa-miR-3912-5p miRNA MIMAT0027036 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02721887 hsa-miR-203a-3p miRNA MIMAT0000264 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02734374 hsa-miR-494-3p miRNA MIMAT0002816 UBE2NL mRNA 389898 CLIP-seq//Prediction 0.6308 UBE2NL RAID02741962 hsa-miR-590-5p miRNA MIMAT0003258 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02760732 hsa-miR-208a-3p miRNA MIMAT0000241 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02956566 hsa-miR-548p miRNA MIMAT0005934 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID02980270 hsa-miR-27b-3p miRNA MIMAT0000419 UBE2NL mRNA 389898 Prediction 0.2381 UBE2NL RAID03201171 hsa-miR-1226-5p miRNA MIMAT0005576 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID03263765 hsa-miR-4749-5p miRNA MIMAT0019885 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID03370040 hsa-miR-128-3p miRNA MIMAT0000424 UBE2NL mRNA 389898 Prediction 0.2202 UBE2NL RAID03414514 hsa-miR-376c-3p miRNA MIMAT0000720 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID03431365 hsa-miR-3681-3p miRNA MIMAT0018109 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID03687623 hsa-miR-326 miRNA MIMAT0000756 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID03690268 hsa-miR-1908-5p miRNA MIMAT0007881 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID03785913 hsa-miR-3663-3p miRNA MIMAT0018085 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID03904588 hsa-miR-8064 miRNA MIMAT0030991 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID03941047 hsa-miR-1275 miRNA MIMAT0005929 UBE2NL mRNA 389898 Prediction 0.1828 UBE2NL RAID04017172 hsa-miR-21-5p miRNA MIMAT0000076 UBE2NL mRNA 389898 Prediction 0.1828