DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Med8; MNCb-2386 ATTTA 23-829 904-908 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.!

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT014132 mmu-miR-181a-5p Mus musculus Med8 80509 Mus musculus Sequencing Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000137 mmu-miR-126-5p 80509 Med8 gcgcaugguuuucAUUAUUac |||||| ggguuucuuuguuUAAUAAag 3 9 960 980 [mm9:4:118088353-118088373:+] 0.5846 120 0 -2.91 -0.1251 MIMAT0004545 mmu-miR-200b* 80509 Med8 agguUACGACGGGUC-AUUCUAc :||: ||:||| |||||| gaacGUGUGGCUCAGAUAAGAUc 2 19 784 806 [mm9:4:118088177-118088199:+] 0.5425 134 6 -17.70 -0.1826 MIMAT0004574 mmu-miR-294* 80509 Med8 ucUAUCCCGGAGGUAAAAC-UCa ||| |||| | ||||| || ucAUAUUGCCUGC-UUUUGUAGa 2 21 839 860 [mm9:4:118088232-118088253:+] 0.5293 126 0 -13.01 -0.3940 MIMAT0004575 mmu-miR-295* 80509 Med8 cuucACACGGGGUGUAAAC-UCa ||||::|: |||||| || agccUGUGUUCU-CAUUUGUAGa 2 19 180 201 [mm9:4:118087573-118087594:+] 0.6591 128 0 -16.72 -0.8752 MIMAT0004579 mmu-miR-302a* 80509 Med8 cgUUCAUGUUGGUGCAAAUUca ||| :: |: :|||||| caAAGGGUUUCUUUGUUUAAua 3 21 956 977 [mm9:4:118088349-118088370:+] 0.5846 132 0 -6.92 -0.1756 MIMAT0004617 mmu-miR-148a* 80509 Med8 ucAGCCUCACAGA-GUCUUGAAa |:| | | | |||||||| ccUUGUCCUAUAUGCAGAACUUa 2 21 334 356 [mm9:4:118087727-118087749:+] 0.5878 147 7 -11.59 -0.7801 MIMAT0004626 mmu-miR-18a* 80509 Med8 guCUUCCUCGUGAAUCCCGUCa ||| ||:: ||||||| uuGAA--AGUGGGAAGGGCAGc 2 21 811 830 [mm9:4:118088204-118088223:+] 0.5394 145 7 -17.34 -0.3687 MIMAT0004626 mmu-miR-18a* 80509 Med8 gucuucCUCGUGAAUCCCGUCa |:||| ||||||| uuuucuGGGCA---AGGGCAGa 2 17 915 933 [mm9:4:118088308-118088326:+] 0.6213 144 7 -18.40 -0.8070 MIMAT0004636 mmu-miR-93* 80509 Med8 gcCCUUCAC-GAUCGAGUCGUCa || || | :|: ||||||| agGGCAGAGAUUGAGUCAGCAGa 2 21 926 948 [mm9:4:118088319-118088341:+] 0.6030 151 7 -19.97 -0.7748 MIMAT0004643 mmu-miR-331-5p 80509 Med8 ccuagggACC-CUGGUAUGGAUc ||| ||: ||||||| uuguagaUGGUGAUAAUACCUAc 2 16 195 217 [mm9:4:118087588-118087610:+] 0.6591 154 7 -14.54 -0.6534 MIMAT0004691 mmu-miR-382* 80509 Med8 uuuuucacaacaggcACUUACu |||||| auuaaaaugagaaaaUGAAUGu 2 8 238 259 [mm9:4:118087631-118087652:+] 0.6591 120 6 -5.99 -0.1784 MIMAT0001094 mmu-miR-412 80509 Med8 gccgaucaccuGGUCCACUu :||||||| agccuccacucUCAGGUGAu 2 10 12 31 [mm9:4:118087405-118087424:+] 0.5786 141 7 -12.68 -0.5456 MIMAT0001094 mmu-miR-412 80509 Med8 gccgaucaccugGUCCACUu ||||||| cccuaaaagcuaCAGGUGAg 2 9 485 504 [mm9:4:118087878-118087897:+] 0.5254 140 7 -14.92 -0.1526 MIMAT0003127 mmu-miR-484 80509 Med8 uagcccuccccuGACUCGGACu ||||||||| gaccuaauauuuCUGAGCCUGu 2 11 165 186 [mm9:4:118087558-118087579:+] 0.6463 150 7 -18.27 -0.9023 MIMAT0003736 mmu-miR-670 80509 Med8 aaGUGGUGUAUGUGAGUCC-CUa || | : || |||||| || ggCAGCCUCCACUCUCAGGUGAu 2 21 9 31 [mm9:4:118087402-118087424:+] 0.5786 120 0 -18.96 -0.5172 MIMAT0014816 mmu-miR-3099 80509 Med8 agGGGUUGGAGAGAGA-UCGGAu ||:|| | |:||| ||||| gaCCUAA--UAUUUCUGAGCCUg 2 21 165 185 [mm9:4:118087558-118087578:+] 0.6463 125 0 -21.92 -0.8383 MIMAT0003740 mmu-miR-674 80509 Med8 auGUGGUGAGGGUAGAGU-CACg || | |||| ||||| ||| ggCAGC-CUCCACUCUCAGGUGa 2 21 9 30 [mm9:4:118087402-118087423:+] 0.5786 126 0 -22.51 -0.8760 MIMAT0003451 mmu-miR-677 80509 Med8 agucuucgauUAGUAGUGACUu ||| ||||||| guccucuuccAUC-UCACUGAa 2 13 766 786 [mm9:4:118088159-118088179:+] 0.5425 146 7 -14.09 -0.4448 MIMAT0003457 mmu-miR-680 80509 Med8 ggGGGUACA-GUCG---UCUACGGg |:| ||| | || ||||||| gcCUCCUGUGCUGCUAAAGAUGCCc 2 20 594 618 [mm9:4:118087987-118088011:+] 0.4880 149 7 -28.76 -0.1860 MIMAT0003468 mmu-miR-689 80509 Med8 ccugGGGCGGCUC-GCCCCUGc |:: :: || :|||||| aaggCUUAUUUAGAUGGGGACa 2 18 68 89 [mm9:4:118087461-118087482:+] 0.6470 128 6 -19.06 -0.2839 MIMAT0003471 mmu-miR-692 80509 Med8 cuCACUCCGCGAGUUUCUCUa |||||| : || |||| uuGUGAGGAUUAAAAUGAGAa 2 20 230 250 [mm9:4:118087623-118087643:+] 0.6591 127 0 -15.67 -0.1331 MIMAT0003472 mmu-miR-693-5p 80509 Med8 cuuuugaaagccUACACCGAc :||||||| aucucacugaacGUGUGGCUc 2 10 776 796 [mm9:4:118088169-118088189:+] 0.5425 141 7 -13.83 -0.1475 MIMAT0003499 mmu-miR-709 80509 Med8 agGA-GGACGGAGAC-GGAGg || ||||:||||| |||| gaCUCCCUGUCUCUGUCCUCu 2 18 752 772 [mm9:4:118088145-118088165:+] 0.5306 136 0 -29.73 -0.1554 MIMAT0003506 mmu-miR-715 80509 Med8 gugCGCCCCCACACGUGCCUc || || ||||||| cugGCAGGCAACAGCACGGAg 2 19 655 675 [mm9:4:118088048-118088068:+] 0.5034 142 7 -20.40 -0.2420 MIMAT0003510 mmu-miR-717 80509 Med8 ucucuUCCAUAGAGACA-GACUc ||||: ||||| |||| cucucAGGUG-AUCUGUGCUGAg 2 18 20 41 [mm9:4:118087413-118087434:+] 0.5786 123 0 -21.60 -0.4545 MIMAT0003781 mmu-miR-676* 80509 Med8 cguucaGGAUUCCAACAUCUCa |||: |||||||| auauugCCUGCUUUUGUAGAGu 2 17 841 862 [mm9:4:118088234-118088255:+] 0.5293 152 7 -17.98 -0.4682 MIMAT0004838 mmu-miR-742* 80509 Med8 acuaAUCGUUGGUACACUCau ||| : : |||||| cucgUAGGGUUGUUGUGAGga 3 18 218 238 [mm9:4:118087611-118087631:+] 0.6591 125 0 -10.43 -0.2278 MIMAT0004848 mmu-miR-883a-5p 80509 Med8 cauuGACGAUGAAGAGAGUCGu |||:|:| |:||||||| aggcCUGUUGCCUUUCUCAGCg 2 19 890 911 [mm9:4:118088283-118088304:+] 0.5192 170 7 -25.35 -0.4219 MIMAT0004848 mmu-miR-883a-5p 80509 Med8 cauugacgaUGAAGAGAGUCGu || ||||||| cagcaagagACAGAUCUCAGCu 2 14 110 131 [mm9:4:118087503-118087524:+] 0.6336 141 7 -13.41 -0.2568 MIMAT0005293 mmu-miR-467e 80509 Med8 ugUAUAUGUACG-AGUGUGAAUa | ||: |||: ||||||| gaAAAUGAAUGUAAAACACUUAg 2 21 248 270 [mm9:4:118087641-118087663:+] 0.6591 151 7 -11.49 -0.9478 MIMAT0005830 mmu-miR-466l 80509 Med8 uuauacacacguacAUAAAUau |||||| uuguuuaauaaagaUAUUUAaa 3 9 968 989 [mm9:4:118088361-118088382:+] 0.5846 120 0 -0.84 -0.2178 MIMAT0005838 mmu-miR-669j 80509 Med8 acaAACGUACACUCAUAUACGu || | ||| ||||||| ccaUUCCUUGU-CCUAUAUGCa 2 20 329 349 [mm9:4:118087722-118087742:+] 0.5853 149 7 -9.27 -0.5984 MIMAT0005840 mmu-miR-669i 80509 Med8 caUACGUACACA-CAUAUACGu || | | ||| ||||||| ccAUUCCU-UGUCCUAUAUGCa 2 20 329 349 [mm9:4:118087722-118087742:+] 0.5853 148 7 -9.39 -0.5984 MIMAT0005851 mmu-miR-1193 80509 Med8 cuAUCAUUUUGCCCACUGGAu | | :||| ||||||| acUUGGGAAA---GUGACCUa 2 20 153 170 [mm9:4:118087546-118087563:+] 0.6336 143 7 -15.07 -1.2231 MIMAT0005855 mmu-miR-467h 80509 Med8 ugUAUAUGUACG-UGUGUGAAUa | ||: |||: | ||||||| gaAAAUGAAUGUAAAACACUUAg 2 21 248 270 [mm9:4:118087641-118087663:+] 0.6591 159 7 -12.44 -0.9478 MIMAT0007874 mmu-miR-1904 80509 Med8 ggagggagguCUC-CUCGUCUUg ||| ||||||| ggcagagauuGAGUCAGCAGAAu 2 13 928 950 [mm9:4:118088321-118088343:+] 0.6030 143 7 -15.35 -0.3572 MIMAT0007876 mmu-miR-1907 80509 Med8 ugGAGGUC-UAGGAGACGACGAg :|::|| |||| ||||||| ucUUUUAGCCUCCUGUGCUGCUa 2 21 587 609 [mm9:4:118087980-118088002:+] 0.4880 163 7 -26.35 -0.2376 MIMAT0007876 mmu-miR-1907 80509 Med8 ugGAGGUCUAGGA-GAC-GACGAg ||||| || | :|| ||||| agCUCCA-UUCAUAUUGCCUGCUu 2 21 831 853 [mm9:4:118088224-118088246:+] 0.5394 121 0 -19.24 -0.6316 MIMAT0009396 mmu-miR-1933-5p 80509 Med8 uuUGAUUCUGGCUUGUGGUACUGa |:| :| :| | | ||||||| ugAUUUGGUUC-AUCUCCAUGACa 2 23 360 382 [mm9:4:118087753-118087775:+] 0.5903 152 7 -13.44 -0.7337 MIMAT0009413 mmu-miR-1947 80509 Med8 gucgUGAGUCGAUCGAG-CAGGa |||| ||: ||| |||| gacgACUC-CCUGUCUCUGUCCu 2 19 749 770 [mm9:4:118088142-118088163:+] 0.5306 120 0 -19.63 -0.1957 MIMAT0009431 mmu-miR-1958 80509 Med8 ugaaugacgaaggugAAAGGAu |||||| uugaauaaaugauagUUUCCUa 2 8 294 315 [mm9:4:118087687-118087708:+] 0.6222 120 6 -10.60 -0.1207 MIMAT0009434 mmu-miR-1961 80509 Med8 aagAUUGAUGAUGGAGu |||: ||||||| ugaUAAUACCUACCUCg 2 15 205 221 [mm9:4:118087598-118087614:+] 0.6591 150 7 -13.79 -0.5972 MIMAT0009435 mmu-miR-1962 80509 Med8 uacacagggucaCGGUCGGAGa | ||||||| ----guguggacGGCAGCCUCc 2 11 1 18 [mm9:4:118087394-118087411:+] 0.5510 142 7 -20.76 -0.3468 MIMAT0009442 mmu-miR-1969 80509 Med8 ugGGUACAAUUUCAG----AGGUAGAa || ||| ||| ||||||| cuCCCUGUCUCUGUCCUCUUCCAUCUc 2 22 754 780 [mm9:4:118088147-118088173:+] 0.5306 144 7 -19.46 -0.3148 MIMAT0009455 mmu-miR-1983 80509 Med8 ucuuuUGUACGAGGUCCACUc | | ||| ||||||| gcccuAAAAGCUACAGGUGAg 2 17 484 504 [mm9:4:118087877-118087897:+] 0.5254 156 7 -20.04 -0.1526 MIMAT0009455 mmu-miR-1983 80509 Med8 ucuuuuguacGAG-GUCCACUc ||| ||||||| gcagccuccaCUCUCAGGUGAu 2 12 10 31 [mm9:4:118087403-118087424:+] 0.5786 146 7 -16.13 -0.5492 MIMAT0011221 mmu-miR-2145 80509 Med8 uugguccGGGCUGGGACGa ::| ||||||| ccuaccuUUCAACCCUGCc 2 13 312 330 [mm9:4:118087705-118087723:+] 0.5853 144 7 -18.11 -0.8072 MIMAT0011287 mmu-miR-2183 80509 Med8 uccUCCAGUCCCCAAGUu :|||: |||||||| cguGGGUU-GGGGUUCAu 2 16 719 735 [mm9:4:118088112-118088128:+] 0.5187 153 7 -20.35 -0.2969 MIMAT0012774 mmu-miR-664 80509 Med8 auccgacccCUCAUUUACUUAu ||| |||||||| gauuaaaauGAGAAAAUGAAUg 2 14 237 258 [mm9:4:118087630-118087651:+] 0.6591 157 7 -11.65 -1.1078 MIMAT0015643 mmu-miR-3472 80509 Med8 ccaagGAAGGUCGAAGACCG-AUAAu :||:: ||| ||| |||| caugaUUUUUUGCUCAAGGCUUAUUu 2 21 53 78 [mm9:4:118087446-118087471:+] 0.6266 120 0 -10.89 -0.6016 MIMAT0000121 mmu-let-7g 80509 Med8 uugaCAUGUUUGAUGAUGGAGu ||: ||: ||||||| gaugGUGAUAAUACCUACCUCg 2 19 200 221 [mm9:4:118087593-118087614:+] 0.6591 150 7 -16.00 -0.5972 MIMAT0000122 mmu-let-7i 80509 Med8 uuGUCGUGUUUGAUGAUGGAGu ::|:: ||: ||||||| gaUGGUGAUAAUACCUACCUCg 2 21 200 221 [mm9:4:118087593-118087614:+] 0.6591 148 7 -15.74 -0.5972 MIMAT0000124 mmu-miR-15b 80509 Med8 acAUUUGGUACUACACGACGAu | |:|| | ||||||||| uuUUAGCC-UCCUGUGCUGCUa 2 21 589 609 [mm9:4:118087982-118088002:+] 0.4880 158 7 -20.71 -0.2354 MIMAT0000126 mmu-miR-27b 80509 Med8 cgUCUUGAAUC--GGUGACACUu ||| || || ||||||||| acAGAUCUCAGCUCCACUGUGAa 2 20 119 141 [mm9:4:118087512-118087534:+] 0.6336 166 7 -25.54 -0.4229 MIMAT0000140 mmu-miR-128 80509 Med8 uuUCUCUGG-CCAAGUGACACu ||| :| | | ||||||| acAGAUCUCAGCUCCACUGUGa 2 20 119 140 [mm9:4:118087512-118087533:+] 0.6336 150 7 -16.34 -0.5682 MIMAT0000210 mmu-miR-181a 80509 Med8 ugaguggcugucgcaACUUACAa ||||||| auuaaaaugagaaaaUGAAUGUa 2 9 238 260 [mm9:4:118087631-118087653:+] 0.6591 140 7 -8.90 -1.2917 MIMAT0000219 mmu-miR-24 80509 Med8 gacaaggacgacuuGACUCGGu ||||||| gugaccuaauauuuCUGAGCCu 2 9 163 184 [mm9:4:118087556-118087577:+] 0.6463 140 7 -16.65 -1.0489 MIMAT0000225 mmu-miR-195 80509 Med8 cgguuauaAAGACACGACGAu | |||||||||| uuuuagccUCCUGUGCUGCUa 2 14 589 609 [mm9:4:118087982-118088002:+] 0.4880 157 7 -22.42 -0.2376 MIMAT0000247 mmu-miR-143 80509 Med8 cucgaugucACGAAGUAGAGu || |||||||| auugugauuUGGUUCAUCUCc 2 13 356 376 [mm9:4:118087749-118087769:+] 0.5903 152 7 -13.04 -0.5899 MIMAT0004576 mmu-miR-296-3p 80509 Med8 ccUCUCGGAGG-UGG---GUUGGGAg | ||::||| ||| ||||||| ugAUAGUUUCCUACCUUUCAACCCUg 2 21 303 328 [mm9:4:118087696-118087721:+] 0.6222 158 7 -24.58 -0.7446 MIMAT0000383 mmu-let-7d 80509 Med8 uugaUA-CGUUG-GAU-GAUGGAGa || |::|: || ||||||| guagAUGGUGAUAAUACCUACCUCg 2 19 197 221 [mm9:4:118087590-118087614:+] 0.6591 143 7 -13.87 -0.6008 MIMAT0000521 mmu-let-7a 80509 Med8 uugauaUGUUGGAU-GAUGGAGu |:|| || ||||||| auggugAUAA--UACCUACCUCg 2 17 201 221 [mm9:4:118087594-118087614:+] 0.6591 144 7 -15.99 -0.5972 MIMAT0000522 mmu-let-7b 80509 Med8 uuggugUGUUGGAU-GAUGGAGu |:|| || ||||||| auggugAUAA--UACCUACCUCg 2 17 201 221 [mm9:4:118087594-118087614:+] 0.6591 144 7 -15.89 -0.5972 MIMAT0000523 mmu-let-7c 80509 Med8 uugguaUGUUGGAU-GAUGGAGu |:|| || ||||||| auggugAUAA--UACCUACCUCg 2 17 201 221 [mm9:4:118087594-118087614:+] 0.6591 144 7 -15.99 -0.5972 MIMAT0000524 mmu-let-7e 80509 Med8 uugauaUGUUGGAGGAUGGAGu |:|| : |||||||| auggugAUAA-UACCUACCUCg 2 17 201 221 [mm9:4:118087594-118087614:+] 0.6591 150 7 -19.68 -0.5972 MIMAT0000525 mmu-let-7f 80509 Med8 uugauaUGUUAGAUGAUGGAGu |:||| ||||||| auggugAUAAU-ACCUACCUCg 2 17 201 221 [mm9:4:118087594-118087614:+] 0.6591 146 7 -16.30 -0.5935 MIMAT0000526 mmu-miR-15a 80509 Med8 guguUUGGUAAUACACGACGAu |:|| | ||||||||| uuuuAGCC-UCCUGUGCUGCUa 2 19 589 609 [mm9:4:118087982-118088002:+] 0.4880 156 7 -20.71 -0.2354 MIMAT0000527 mmu-miR-16 80509 Med8 gcgguuauaaauGCACGACGAu :|||||||| cuuuuagccuccUGUGCUGCUa 2 11 588 609 [mm9:4:118087981-118088002:+] 0.4880 146 7 -19.41 -0.2376 MIMAT0000537 mmu-miR-27a 80509 Med8 cgcCUUGAAUC--GGUGACACUu || || || ||||||||| acaGAUCUCAGCUCCACUGUGAa 2 19 119 141 [mm9:4:118087512-118087534:+] 0.6336 161 7 -20.13 -0.4229 MIMAT0000545 mmu-miR-98 80509 Med8 uuguuaUGUUGAAUGAUGGAGu |:|| | ||||||| auggugAUAA-UACCUACCUCg 2 17 201 221 [mm9:4:118087594-118087614:+] 0.6591 146 7 -17.26 -0.5972 MIMAT0000548 mmu-miR-322 80509 Med8 agguuUUGUACUUAACGACGAc |:| | ||||||| cuuuuAGCCUCCUGUGCUGCUa 2 18 588 609 [mm9:4:118087981-118088002:+] 0.4880 141 7 -10.90 -0.2354 MIMAT0000590 mmu-miR-342-3p 80509 Med8 ugcccaCGCUAAAGACAC-ACUCu |:|| |||||| |||| ucucagGUGA--UCUGUGCUGAGu 2 18 21 42 [mm9:4:118087414-118087435:+] 0.5786 122 0 -20.21 -0.2738 MIMAT0000590 mmu-miR-342-3p 80509 Med8 ugcccacgcuaaagacACACUCu |||||| uaccucguaggguuguUGUGAGg 2 8 215 237 [mm9:4:118087608-118087630:+] 0.6591 120 6 -15.40 -0.1016 MIMAT0000673 mmu-miR-181b 80509 Med8 ugggUGGCUGUCGUUACUUACAa | :|| | ||||||||| uuaaAAUGAGA-AAAUGAAUGUa 2 20 239 260 [mm9:4:118087632-118087653:+] 0.6591 153 7 -11.76 -1.2917 MIMAT0000674 mmu-miR-181c 80509 Med8 ugagUGGCUGUCCAACUUACAa | :|| | ||||||| uuaaAAUGAGAAAAUGAAUGUa 2 19 239 260 [mm9:4:118087632-118087653:+] 0.6591 146 7 -8.96 -1.2925 MIMAT0000677 mmu-miR-7a 80509 Med8 uguugUUUUAGUGAUCAGAAGGu |:||| ||| ||||||| cacggAGAAU-ACU-GUCUUCCu 2 19 669 689 [mm9:4:118088062-118088082:+] 0.5187 158 7 -19.21 -0.1304 MIMAT0000678 mmu-miR-7b 80509 Med8 uguugUUUUAGUGUUCAGAAGGu |:||| || ||||||| cacggAGAAU-AC-UGUCUUCCu 2 19 669 689 [mm9:4:118088062-118088082:+] 0.5187 150 7 -16.99 -0.1407 MIMAT0001095 mmu-miR-370 80509 Med8 ugguccaaggugGGGUCGUCCg :|||||||| agaugcccagggUCCAGCAGGu 2 11 611 632 [mm9:4:118088004-118088025:+] 0.4880 146 7 -27.36 -0.1184 MIMAT0001533 mmu-miR-448 80509 Med8 uacccuGUAGGAUGUAUACGUu ::|||| ||||||| auuccuUGUCCU--AUAUGCAg 2 17 331 350 [mm9:4:118087724-118087743:+] 0.5853 149 7 -13.97 -0.5849 MIMAT0003128 mmu-miR-485 80509 Med8 cuuaaguagUGCCGGUCGGAGa |||| ||||||| ---guguggACGG-CAGCCUCc 2 14 1 18 [mm9:4:118087394-118087411:+] 0.5510 151 7 -20.35 -0.3255 MIMAT0003168 mmu-miR-543 80509 Med8 uucUUCAC-GUGGCGCUUACAaa || || | :|||||| uuaAAAUGAGAAAAUGAAUGUaa 3 20 239 261 [mm9:4:118087632-118087654:+] 0.6591 122 0 -6.80 -0.2314 MIMAT0003450 mmu-miR-488 80509 Med8 cugguucuuugucGGAAAGUu ||||||| ugauaguuuccuaCCUUUCAa 2 9 303 323 [mm9:4:118087696-118087716:+] 0.6222 140 7 -11.16 -1.0214 MIMAT0003453 mmu-miR-497 80509 Med8 auguUUGGUGUCACACGACGAc |:|| | ||||||||| uuuuAGCCUC-CUGUGCUGCUa 2 19 589 609 [mm9:4:118087982-118088002:+] 0.4880 156 7 -18.55 -0.2333 MIMAT0004324 mmu-miR-181d 80509 Med8 ugggUGGCUGUUGUUACUUACAa | :|| || ||||||||| uuaaAAUGAGAA-AAUGAAUGUa 2 20 239 260 [mm9:4:118087632-118087653:+] 0.6591 161 7 -12.90 -1.2909 MIMAT0004847 mmu-miR-882 80509 Med8 ugAUUACGC--GAUUGAG-AGAGGa || ||:| :|:::|| ||||| cuUAUUGUGAUUUGGUUCAUCUCCa 2 21 353 377 [mm9:4:118087746-118087770:+] 0.5878 123 0 -17.19 -0.8667 MIMAT0004869 mmu-miR-421 80509 Med8 cgCGGGUUAAUUACAGAC--AACUa ||:||: ||| |||| |||| ugGCUCAGAUAAGAUCUGGAUUGAa 2 22 791 815 [mm9:4:118088184-118088208:+] 0.5409 121 0 -15.78 -0.6403 MIMAT0004896 mmu-miR-590-3p 80509 Med8 ugAUCGA-AUAUGU-AUUUUAau | |:| |: : | |||||| ggUUGUUGUGAGGAUUAAAAUga 3 20 225 247 [mm9:4:118087618-118087640:+] 0.6591 121 0 -4.67 -0.1046 MIMAT0004941 mmu-miR-544 80509 Med8 cucGAACGAUUUUUACGUCUUa ||||: | |||||||| uucCUUGUCCUAUAUGCAGAAc 2 20 332 353 [mm9:4:118087725-118087746:+] 0.5853 159 7 -14.77 -0.9541

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G069180 Med8 Mus musculus 80509 19536157 0 0 R50921; MOUSE$MED8_01; Binding factors: mmu-miR-181a-5p , mmu-miR-181b-5p , mmu-miR-181c-3p , mmu-miR-181d-5p // 0 0 R50922; MOUSE$MED8_02; Binding factors: mmu-miR-153-3p , mmu-miR-448-3p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Med8 mmu-miR-664 beg:243 end:259 pic:3' ATCCGACCCCTCATTTACTTAT 5'& ||| ||||||||. &5' ---------GAGAAAATGAATG 3' Med8 mmu-miR-467h beg:253 end:270 pic:3' TGTATATGTACGTG-TGTGAATA 5'& |||.| ||||||| &5' --------ATGTAAAACACTTA- 3' Med8 mmu-miR-148astar beg:345 end:356 pic:3' TCAGCCTCACAGAGTCTTGAAA 5'& |||||||| &5' -------------CAGAACTT- 3' Med8 mmu-miR-216b beg:920 end:938 pic:3' AGTGTAAACGGA--CGTCTCTAAA 5'& || ||||||||| &5' --------GCAAGGGCAGAGATT- 3' Med8 mmu-miR-18astar beg:813 end:829 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& || .||| ||||||| &5' -AGTGGGA------AGGGCAG- 3' Med8 mmu-miR-18astar beg:918 end:933 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& |.||| ||||||| &5' ------GGGCA---AGGGCAG- 3' Med8 mmu-miR-331-5p beg:199 end:217 pic:3' CCTAGGGACC-CTGGTATGGATC 5'& ||| ||. ||||||| &5' -------TGGTGATAATACCTA- 3' Med8 mmu-miR-296-3p beg:309 end:328 pic:3' CCTCTCGGA-GGTGGGTTGGGAG 5'& ||| || ..||||||| &5' ------CCTACCTTTCAACCCT- 3' Med8 mmu-miR-370 beg:614 end:633 pic:3' TGGTCCAAGGTGGGGTCGTCCG 5'& ||||| .||||||||. &5' -CCAGGG-----TCCAGCAGGT 3' Med8 mmu-miR-1962 beg:0 end:18 pic:3' TACACAGGGTCACGGTCGGAGA 5'& .|||| | | ||||||| &5' GTGTGGAC----GGCAGCCTC- 3' Med8 mmu-miR-485 beg:4 end:18 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& |||| ||||||| &5' ---------ACGG-CAGCCTC- 3' Med8 mmu-miR-504 beg:608 end:625 pic:3' CTATCTCACGTCTGGTCCCAGA 5'& ||| ||| |||||||| &5' ---AGA-TGC---CCAGGGTC- 3' Med8 mmu-miR-1983 beg:17 end:31 pic:3' TCTTTTGTACGAG-GTCCACTC 5'& ||| ||||||| &5' ----------CTCTCAGGTGA- 3' Med8 mmu-miR-412 beg:20 end:31 pic:3' GCCGATCACCTGGTCCACTT 5'& .||||||| &5' -----------TCAGGTGA- 3' Med8 mmu-miR-1983 beg:490 end:505 pic:3' TCTTTTGTACGAGGTCCACTC 5'& ||| |||||||| &5' ---------GCTACAGGTGAG 3' Med8 mmu-miR-412 beg:490 end:505 pic:3' GCCGATCACCTGGTCCACTT 5'& |||| |||||||. &5' --GCTA------CAGGTGAG 3' Med8 mmu-miR-1933-5p beg:363 end:382 pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& | . | ||||||| &5' -------GGTTCATCTCCATGAC- 3' Med8 mmu-miR-761 beg:471 end:484 pic:3' ACACAGTCAAAGTGGGACGACG 5'& |. ||||||| &5' -----------CGGCCTGCTG- 3' Med8 mmu-let-7d beg:202 end:221 pic:3' TTGATAC-GTTGGATGATGGAGA 5'& .|| .||. ||||||| &5' ----GTGATAATAC-CTACCTC- 3' Med8 mmu-miR-98 beg:203 end:221 pic:3' TTGTTATGTTGAATGATGGAGT 5'& .|.||||| ||||||| &5' GATAATAC------CTACCTC- 3' Med8 mmu-let-7a beg:204 end:221 pic:3' TTGATATGTTGGATGATGGAGT 5'& |.||. ||||||| &5' ------ATAATAC-CTACCTC- 3' Med8 mmu-let-7b beg:204 end:221 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& |.||. ||||||| &5' ------ATAATAC-CTACCTC- 3' Med8 mmu-let-7c beg:204 end:221 pic:3' TTGGTATGTTGGATGATGGAGT 5'& |.||. ||||||| &5' ------ATAATAC-CTACCTC- 3' Med8 mmu-let-7e beg:204 end:221 pic:3' TTGATATGTTGGAGGATGGAGT 5'& |.||. |||||||| &5' ------ATAATA-CCTACCTC- 3' Med8 mmu-let-7f beg:204 end:221 pic:3' TTGATATGTTAGATGATGGAGT 5'& |.||| ||||||| &5' ------ATAATAC-CTACCTC- 3' Med8 mmu-miR-1961 beg:205 end:221 pic:3' AAGATTGATGATGGAGT 5'& |||. ||||||| &5' ---TAATACCTACCTC- 3' Med8 mmu-miR-484 beg:174 end:186 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||||||||| &5' ------------CTGAGCCTG- 3' Med8 mmu-miR-2183 beg:717 end:735 pic:3' TCCTCCAGTCCCCAAGTT 5'& | |||. |||||||| &5' -GTGGGTT-GGGGTTCA- 3' Med8 mmu-miR-1193 beg:154 end:171 pic:3' CTATCATTTTGCCC----ACTGGAT 5'& ||| ||||||| &5' -----------GGGAAAGTGACCTA 3' Med8 mcmv-miR-m107-1-5p beg:148 end:169 pic:3' CCAC-TGAGCTCTGCTCACTGGC 5'& | |||.|.|| ||||||| &5' ---GAACTTGGGAA-AGTGACC- 3' Med8 mcmv-miR-m108-2-3p beg:924 end:944 pic:3' TGGCCAGTGAGCAGAGCTCAGTG 5'& || || | |.|||||| &5' ---GGGCAGA-GA-TTGAGTCA- 3' Med8 mcmv-miR-m21-1 beg:547 end:566 pic:3' GCCGAACTTGCACAGGGGATA 5'& ||| |.| |.||||. &5' --GCTC-AGCAT-TTCCCTG- 3' Med8 mcmv-miR-m22-1 beg:68 end:88 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& |||.| ||.||||| &5' -GGCTTATTTA--GATGGGGA- 3' Med8 mmu-let-7bstar beg:691 end:716 pic:3' CCCTTCCGTCATC-CAACATATC 5'& |||.|||||| | ||| ||||| &5' -GGAGGGCAGTTGTGTTTTATAG 3' Med8 mmu-let-7g beg:201 end:221 pic:3' TTGACATGTTTGATGATGGAGT 5'& ||. ||. ||||||| &5' ----GTGATAATACCTACCTC- 3' Med8 mmu-let-7gstar beg:695 end:717 pic:3' CGTTCCGTC-AC-CGGACATGTCA 5'& |.||||| || |..| ||.||| &5' --AGGGCAGTTGTGTTT-TATAGT 3' Med8 mmu-miR-106a beg:842 end:865 pic:3' GATGGACGT-GACAATCGTGAAAC 5'& |.||||| .|| ||| ||| &5' -TGCCTGCTTTTG-TAGAG--TTG 3' Med8 mmu-miR-1193 beg:23 end:35 pic:3' CTATCATTTTGCCCACTGGAT 5'& |||||.||. &5' ------------GGTGATCTG 3' Med8 mmu-miR-1193 beg:406 end:427 pic:3' CTATCATTTTGC-CCACTGGAT 5'& ||| ||||.|||. &5' ---AGTTATCCATGGTGGCCTG 3' Med8 mmu-miR-1196 beg:918 end:938 pic:3' TCCGTCTCCGTCCATCTAAA 5'& .|||| ||||| ||||| &5' GGGCAAGGGCAG--AGATT- 3' Med8 mmu-miR-1224 beg:759 end:783 pic:3' GAGGT-GGAG-GGGTCAGGAGTG 5'& |||.. |||| .||| .||||| &5' CTCTGTCCTCTTCCA--TCTCAC 3' Med8 mmu-miR-125b-3p beg:635 end:656 pic:3' TCGAGGGTTCTCGGATTGGGCA 5'& |||||..||||| .||.| &5' AGCTCTTAAGAGG--GACTC-- 3' Med8 mmu-miR-128 beg:119 end:141 pic:3' TTTCTCTGGCCAA---GTGACACT 5'& |||.| |||||||| &5' ----AGATCTCAGCTCCACTGTGA 3' Med8 mmu-miR-1306 beg:378 end:397 pic:3' GTAGTGGTGGTCTCGGTTGCA 5'& ||||| . |||||||.| &5' ---CACCAGT-GAGCCAATG- 3' Med8 mmu-miR-135astar beg:744 end:768 pic:3' GCGGTGCCGAGGT-TAGGGATAT 5'& |. ||| |||| .||.||.| &5' -GTGACGACTCCCTGTCTCTGT- 3' Med8 mmu-miR-136star beg:187 end:209 pic:3' TTCTGAGTAAAC-TCTGCTACTA 5'& |||||||| |||.|.|||| &5' ----CTCATTTGTAGATGGTGAT 3' Med8 mmu-miR-137 beg:31 end:53 pic:3' GATGCGCATAAGAATTCGTTATT 5'& |.| ||.||||||.| &5' ----GTGCTGAGTTGAGCAATGA 3' Med8 mmu-miR-139-5p beg:843 end:861 pic:3' GACCTCTGTGCACGT-GACATCT 5'& .| ||| .|||||| &5' --------GCCTGCTTTTGTAGA 3' Med8 mmu-miR-143 beg:356 end:376 pic:3' CTCGATGTCACGAAGTAGAGT 5'& |. |. || |||||||| &5' --GTGATT-TGGTTCATCTC- 3' Med8 mmu-miR-143 beg:757 end:782 pic:3' CTCGATGTCAC--GAA-GTAGAGT 5'& |. | || ||| ||||||| &5' --GTCTCTGTCCTCTTCCATCTCA 3' Med8 mmu-miR-146a beg:177 end:194 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |.||..| ||||||| &5' AGCCTGT--------GTTCTCA 3' Med8 mmu-miR-146b beg:177 end:194 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |||||.| ||||||| &5' AGCCTGT--------GTTCTCA 3' Med8 mmu-miR-154star beg:526 end:543 pic:3' TTATCCAGTTGGCACATACTAA 5'& | || ||.|||| &5' -------CTTCCAGGTGTGAT- 3' Med8 mmu-miR-15a beg:590 end:610 pic:3' GTGTTTGGTAATACACGACGAT 5'& |.|| |||||||||| &5' ----AGCCTCC-TGTGCTGCTA 3' Med8 mmu-miR-15astar beg:406 end:427 pic:3' ACTCCGTCGT---GTCATACCGGAC 5'& ||. || .||||||| &5' ------AGTTATCCATGGTGGCCTG 3' Med8 mmu-miR-15b beg:590 end:610 pic:3' ACATTTGGTACTACACGACGAT 5'& |.|| |||||||||| &5' ----AGCCTCC-TGTGCTGCTA 3' Med8 mmu-miR-15bstar beg:41 end:61 pic:3' ATCTCGTCGTTTATTACTAAGC 5'& ||||| .| ||||||. &5' --GAGCAATGAC--ATGATTT- 3' Med8 mmu-miR-16 beg:591 end:610 pic:3' GCGGTTATAAATGCACGACGAT 5'& ||| .||||||||| &5' -GCCTCC-----TGTGCTGCTA 3' Med8 mmu-miR-16star beg:663 end:682 pic:3' AGTCGTCGTGTCAGTTATGACC 5'& ||||||.| ||||||| &5' ----CAGCACGGAGAATACTG- 3' Med8 mmu-miR-17star beg:448 end:467 pic:3' GATGTTCACGGGAGTGACGTCA 5'& ||.| || |||||| |||| &5' CTGC-AG-GCCCTC-CTGC--- 3' Med8 mmu-miR-181b beg:242 end:260 pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& .|| | ||||||||| &5' ------TGAGAA-AATGAATGT- 3' Med8 mmu-miR-181b beg:371 end:390 pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& .||| .|||| ||.|||. &5' -TCCA-TGACACCAGTGAG---- 3' Med8 mmu-miR-181d beg:242 end:260 pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& .|| || ||||||||| &5' ------TGAGAA-AATGAATGT- 3' Med8 mmu-miR-184 beg:753 end:770 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |||| ||||.|||| &5' -CCCTG------TCTCTGTCC- 3' Med8 mmu-miR-188-3p beg:802 end:823 pic:3' ACGTTTGGGACGTA-----CACCCTC 5'& .||| || |||||| &5' -------TCTGGATTGAAAGTGGGA- 3' Med8 mmu-miR-18astar beg:694 end:704 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& |||||||| &5' --------------AGGGCAGT 3' Med8 mmu-miR-1904 beg:681 end:703 pic:3' GGAGGGAGG--TCTCCTCGTCTTG 5'& ||.||||| .|||| |||| &5' -CTTCCTCCGTGGAGG-GCAG--- 3' Med8 mmu-miR-1907 beg:585 end:609 pic:3' TGGAGGTCT-AGGAGACGACGAG 5'& |.|..|| |||| ||||||| &5' -CTTTTAGCCTCCTGTGCTGCT- 3' Med8 mmu-miR-1928 beg:779 end:795 pic:3' CTCGACCGTTACATCGA 5'& ||| .|||.||| &5' ---CTGAACGTGTGGCT 3' Med8 mmu-miR-1944 beg:653 end:676 pic:3' TTAGTCTTGAACTGTAA---GTCGTGTCTC 5'& ||.|| ||||||.||| &5' ----------TGGCAGGCAACAGCACGGAG 3' Med8 mmu-miR-1950 beg:331 end:352 pic:3' ACTGGTATAGGAATCTACGTCT 5'& || |.|||| ||||||| &5' ---CCTTGTCCTAT-ATGCAGA 3' Med8 mmu-miR-195 beg:591 end:610 pic:3' CGGTTATAAAGACACGACGAT 5'& ||| ||||||||||| &5' GCCTC-----CTGTGCTGCTA 3' Med8 mmu-miR-1953 beg:888 end:909 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |.||||| |||||.|| &5' ---AGGCCTGTTGCCTTTCTCA 3' Med8 mmu-miR-1954 beg:434 end:457 pic:3' TTGTCCCA----GAGTGAGACGTCA 5'& .||| || |||||||| &5' ---GGGGGCATACTGTCTCTGCAG- 3' Med8 mmu-miR-1957 beg:836 end:857 pic:3' CAGTAT-ACGAGATGGTGAC 5'& ||||| ||| ||.|. .|| &5' -TCATATTGC-CTGCTTTTG 3' Med8 mmu-miR-1969 beg:753 end:780 pic:3' TGGGTACAATTTCAG----AGGTAGAA 5'& ||| ||| ||| ||||||| &5' -CCC-TGTCTCTGTCCTCTTCCATCT- 3' Med8 mmu-miR-199a-5p beg:503 end:526 pic:3' CTTGTCCATCAGAC---TTGTGACCC 5'& |||| |||| .||||||| &5' ----AGGTT-TCTGGAGGACACTGG- 3' Med8 mmu-miR-199bstar beg:503 end:526 pic:3' CTTGTCCATCAGAT---TTGTGACCC 5'& |||| |||. .||||||| &5' ----AGGTT-TCTGGAGGACACTGG- 3' Med8 mmu-miR-19astar beg:334 end:355 pic:3' CATCACGTTG-ATACGTTTTGAT 5'& ||. ||||||.|||| &5' ----TGTCCTATATGCAGAACT- 3' Med8 mmu-miR-205 beg:490 end:520 pic:3' GTCTGAGG-CCAC-CTT------ACTTCCT 5'& .|| |||| |.| ||.|||| &5' ---GCTACAGGTGAGGAGGTTTCTGGAGGA 3' Med8 mmu-miR-2134 beg:62 end:73 pic:3' CGTGGGGCAAAGGGTTCTG 5'& |.||||.| &5' -----------CTCAAGGC 3' Med8 mmu-miR-214 beg:462 end:484 pic:3' TGACGGA--CAGACACGGACGACA 5'& ||||| || |||||||| &5' -CTGCCCAAGTACG-GCCTGCTG- 3' Med8 mmu-miR-214 beg:840 end:865 pic:3' TGACGGACAGAC-ACGGA-CGACA 5'& |.|||||| || ||. |.|| &5' ATTGCCTG-CTTTTGTAGAGTTG- 3' Med8 mmu-miR-2141 beg:519 end:534 pic:3' TTGAAAAGACT-GTGGAGGA 5'& |||. |||.||| &5' -------CTGGCCACTTCC- 3' Med8 mmu-miR-23a beg:528 end:542 pic:3' CCTTTAGGGACCGTTACACTA 5'& ||| ..|||||| &5' -----TCCA----GGTGTGAT 3' Med8 mmu-miR-23b beg:528 end:542 pic:3' CCATTAGGGACCGTTACACTA 5'& ||| ..|||||| &5' -----TCCA----GGTGTGAT 3' Med8 mmu-miR-24 beg:164 end:184 pic:3' GACAAGGACGACTT-GACTCGGT 5'& ||| ||||||| &5' -----CCTAATATTTCTGAGCC- 3' Med8 mmu-miR-27a beg:119 end:142 pic:3' CGCCTTGAATCG--GTGACACTT 5'& || || ||| ||||||||| &5' ---GATCTCAGCTCCACTGTGAA 3' Med8 mmu-miR-27astar beg:378 end:402 pic:3' ACGAGTGTTCG-TCG---ATTCGGGA 5'& ||| ||. ||| |..|||| &5' ----CACCAGTGAGCCAATGGGCCC- 3' Med8 mmu-miR-27b beg:119 end:142 pic:3' CGTCTTGAATCG--GTGACACTT 5'& |||| || ||| ||||||||| &5' -CAGATCTCAGCTCCACTGTGAA 3' Med8 mmu-miR-298 beg:749 end:769 pic:3' CCCTTCTTGTCGGGA-GGAGACGG 5'& .|| |||| .|||||.| &5' ------GACT-CCCTGTCTCTGTC 3' Med8 mmu-miR-29bstar beg:529 end:552 pic:3' ATTTGGTGGTA--TACTTTGGTCG 5'& ||| ||||.|||||| &5' ----CCAGGTGTGATGAGACCAGC 3' Med8 mmu-miR-3072 beg:421 end:443 pic:3' TCTTCCGAA---GGACCTCCCCCGT 5'& ||| . || ||||||| &5' ----GGCCTGTATGTGTTGGGGGCA 3' Med8 mmu-miR-30estar beg:798 end:818 pic:3' CGACATTTGTAGG-CTGACTTTC 5'& || |||. ||.|||||| &5' ------AAGATCTGGATTGAAAG 3' Med8 mmu-miR-328 beg:941 end:958 pic:3' TGCCTTCCCGTCTCT-CCCGGTC 5'& ||||| |||||| &5' --------GCAGAATTGGGCCA- 3' Med8 mmu-miR-330star beg:17 end:43 pic:3' AGAGACGTCCG--GGACACGAAACG 5'& |||| ||||. .||||||| |. &5' -CTCT-CAGGTGATCTGTGCTGAGT 3' Med8 mmu-miR-335-3p beg:232 end:252 pic:3' CCAGTCCTCGTTATTACTTTTT 5'& |||| .|| |||||.||| &5' ----AGGATTAA-AATGAGAAA 3' Med8 mmu-miR-340-5p beg:697 end:716 pic:3' TTAGTCAGAGTAACGAAATATT 5'& ||||. ||.||||||. &5' ---CAGTTG---TGTTTTATAG 3' Med8 mmu-miR-346 beg:645 end:665 pic:3' TCTCCGTCCGTGAGCCCGTCTGT 5'& ||| |||| |||||.|| &5' ------AGGGACTCTGGCAGGCA 3' Med8 mmu-miR-3471 beg:109 end:129 pic:3' TTACGGAA--TGTCAACCTAGAGT 5'& || ||| ||||||| &5' ---GCAAGAGACA----GATCTCA 3' Med8 mmu-miR-378 beg:609 end:628 pic:3' GGAAGACTGA-GGT-TCAGGTCA 5'& ||. ||| .|||||| &5' ------GATGCCCAGGGTCCAG- 3' Med8 mmu-miR-412 beg:616 end:636 pic:3' GCCGATCACCTGG---TCCACTT 5'& || || || |||||.| &5' -----AG-GGTCCAGCAGGTGGA 3' Med8 mmu-miR-448 beg:267 end:284 pic:3' TACCCTGTAGGATGTATACGTT 5'& .||| . ||||||| &5' -----GCATG--GTGTATGCAA 3' Med8 mmu-miR-466b-3p beg:417 end:435 pic:3' AGAATACACACGCACATACATAT 5'& ||| || |||||||.| &5' ------GTG-GCCTGTATGTGT- 3' Med8 mmu-miR-467e beg:249 end:270 pic:3' TGTATATGTACGAG-TGTGAATA 5'& ||. |||. ||||||| &5' ----ATGAATGTAAAACACTTA- 3' Med8 mmu-miR-493 beg:96 end:112 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& |||||| .|.|||| &5' ------ACACAG----GCTTTCA 3' Med8 mmu-miR-497 beg:590 end:609 pic:3' ATGTTTGGTGTCACACGACGAC 5'& |.|| | ||||||||| &5' ----AGCCTCC-TGTGCTGCT- 3' Med8 mmu-miR-499 beg:278 end:298 pic:3' TTTGTAGTGACGTTCAGAATT 5'& .|| ||| .|||||.| &5' --GCAATTCTG--GGTCTTGA 3' Med8 mmu-miR-500 beg:263 end:281 pic:3' ACTTGGGAACGGGTCCACGTAA 5'& |.| || ||||.|| &5' -----CTTAGCAT-GGTGTAT- 3' Med8 mmu-miR-503 beg:594 end:610 pic:3' GACGTCATGACAAGGG--CGACGAT 5'& |||. ||||||| &5' ------------TCCTGTGCTGCTA 3' Med8 mmu-miR-511 beg:806 end:829 pic:3' ACTCACG-TCTCGTTTTCCGTA 5'& || || || | .||.|||| &5' -GATTGAAAGTGGGAAGGGCA- 3' Med8 mmu-miR-544 beg:332 end:353 pic:3' CTCGAACGATTTTTACGTCTTA 5'& ||||. |||||||| &5' ---CTTGTCCTATATGCAGAA- 3' Med8 mmu-miR-544 beg:843 end:862 pic:3' CTCGAACGATTTTTACGTCTTA 5'& || |||| ||.|||.| &5' --GCCTGCTTT---TGTAGAGT 3' Med8 mmu-miR-615-5p beg:634 end:657 pic:3' CTAGGCTCGTGG---C-CCCTGGGGG 5'& |||| |. | |||||.|. &5' -----GAGCTCTTAAGAGGGACTCT- 3' Med8 mmu-miR-666-5p beg:830 end:853 pic:3' CCGAGAGTGTCGAC-ACGGGCGA 5'& |||| ||. ||||.||| &5' -GCTC-CATTCATATTGCCTGCT 3' Med8 mmu-miR-669i beg:414 end:435 pic:3' CATACGTACAC-ACATATACGT 5'& ||| .|| |||||.||. &5' --ATG-GTGGCCTGTATGTGT- 3' Med8 mmu-miR-669j beg:267 end:284 pic:3' ACAAACGTACACTCATATACGT 5'& ||||| ||.|||||| &5' -----GCATG---GTGTATGCA 3' Med8 mmu-miR-676star beg:844 end:863 pic:3' CGTTCAGGATTCCAACATCTCA 5'& |||. ||||||||| &5' ------CCTGCTTTTGTAGAGT 3' Med8 mmu-miR-677 beg:773 end:787 pic:3' AGTCTTCGATTAGTAGTGACTT 5'& ||| |||||||| &5' ----------ATC-TCACTGAA 3' Med8 mmu-miR-683 beg:512 end:537 pic:3' CTCCTGTG-TCGAATGTC-GTCC 5'& |||||||| .|| || |||| &5' GAGGACACTGGCC-ACTTCCAGG 3' Med8 mmu-miR-688 beg:178 end:188 pic:3' CTTATTCATCAGCGGACGCT 5'& |||||.| &5' ------------GCCTGTG- 3' Med8 mmu-miR-693-3p beg:843 end:865 pic:3' AATGTCGG-TGTAGAC-TTTCGACG 5'& ||| .| |.|| |.||.|| &5' -----GCCTGCTTTTGTAGAGTTG- 3' Med8 mmu-miR-693-5p beg:778 end:796 pic:3' CTTTTGAAAGCCTACACCGAC 5'& ||| .||||||| &5' ----ACTGAAC-GTGTGGCT- 3' Med8 mmu-miR-706 beg:947 end:970 pic:3' AAAAAACTCTG--TCCCAAAGAGA 5'& |||.| |||||||||.| &5' ----TTGGGCCAAAGGGTTTCTTT 3' Med8 mmu-miR-743b-5p beg:162 end:183 pic:3' ACTAC-CTGTGGTC----AGACTTGT 5'& | ||| |.| |||||.| &5' ----GTGAC-CTAATATTTCTGAGC- 3' Med8 mmu-miR-744star beg:646 end:669 pic:3' TCCAACTCCA----ATCA-CCGTTGTC 5'& |||| |.| |||||||| &5' -----GAGGGACTCTGGCAGGCAACAG 3' Med8 mmu-miR-744star beg:814 end:833 pic:3' TCCAACTCCAATCACCGTTGTC 5'& | || || ||||.||| &5' -----GTGGGAAG-GGCAGCAG 3' Med8 mmu-miR-761 beg:882 end:901 pic:3' ACACAGTCAAAGTGGGACGACG 5'& ||| . ||||.||| &5' -----CAGCCA-GGCCTGTTGC 3' Med8 mmu-miR-764-5p beg:816 end:837 pic:3' TCC-TCCTGTACACTCGTGG 5'& .|| |||.|| ||| || &5' GGGAAGGGCAGC--AGCTCC 3' Med8 mmu-miR-767 beg:263 end:280 pic:3' ACGAGTCTGTTGGTACCACGT 5'& ||.|| |||||||.| &5' --CTTAG-----CATGGTGTA 3' Med8 mmu-miR-7a beg:670 end:689 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .|.| .||| ||||||| &5' -----GAGAATACT-GTCTTCC- 3' Med8 mmu-miR-7a beg:757 end:777 pic:3' TGTTGTTTTAGTGATC--AGAAGGT 5'& .|| ||. ||||||| &5' --------GTCTCTGTCCTCTTCCA 3' Med8 mmu-miR-877 beg:360 end:382 pic:3' GGGACGC-GGTAGAGGAGATG 5'& ..|| | .||||||| || &5' -TTTG-GTTCATCTCCATGAC 3' Med8 mmu-miR-877star beg:496 end:522 pic:3' ACC-CTCCTCCCTCT-TCTCCTGT 5'& || ||||||| .||||||| &5' -GGTGAGGAGGTTTCTGGAGGACA 3' Med8 mmu-miR-881 beg:727 end:749 pic:3' AGATAAGTCTTTTC-TGTGTCAA 5'& .|||| .|||||| &5' ---GTTCATTTGTCTGCACAGT- 3' Med8 mmu-miR-883a-5p beg:539 end:557 pic:3' CATTGACGATGAAGAGAGTCGT 5'& || || ||||||| &5' -----TGAGACCAG-CTCAGCA 3' Med8 mmu-miR-883a-5p beg:113 end:131 pic:3' CATTGACGATGAAGAGAGTCGT 5'& | || ||||||| &5' ------GAGACAGATCTCAGC- 3' Med8 mmu-miR-883a-5p beg:891 end:911 pic:3' CATTGACGATGAAGAGAGTCGT 5'& |||.|.| |.||||||| &5' ----CTGTTGCCTTTCTCAGC- 3' Med8 mmu-miR-93star beg:926 end:948 pic:3' GCCCTTCACGA--TCGAGTCGTCA 5'& ||| || | || ||||||| &5' -GGGCAGAGATTGAG-TCAGCAG- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Med8; MNCb-2386 mmu-let-7f 206 223 UGAUAUGUUAGAUGAUGGAGU- |:||| |||||||: ----GAUAAUAC-CUACCUCGU Med8; MNCb-2386 mmu-let-7g 194 223 UGACAUGU----UUG--AU-GAUGGAGU- :|||| | :|: || |||||||: UUUGUAGAUGGUGAUAAUACCUACCUCGU Med8; MNCb-2386 mmu-miR-128a 113 142 UUUUCUCUGGCCAA-------GUGACACU- ||||||| |||||||| -CAAGAGACAGAUCUCAGCUCCACUGUGAA Med8; MNCb-2386 mmu-miR-128b 113 142 CUUUCUCUGGCCAA-------GUGACACU- ||||||| |||||||| -CAAGAGACAGAUCUCAGCUCCACUGUGAA Med8; MNCb-2386 mmu-miR-133a 69 90 UGUCGACCAA--CUUCCCCUGGUU :||| || |||||| -AGGCUUAUUUAGAUGGGGACA-- Med8; MNCb-2386 mmu-miR-137 31 54 -GAUGCGCAUAAGAAUUCGUUAUU- ||::|| ||:||||||:| UCUGUGCUGAG--UUGAGCAAUGAC Med8; MNCb-2386 mmu-miR-146b 179 195 -UCGGAUACCUUAAGUCAAGAGU- |||||:| ||||||| GAGCCUGU--------GUUCUCAU Med8; MNCb-2386 mmu-miR-150 201 239 GUGACCA-UGU-------------UCCCAACC---CUCU- |||| |:| ||||||| |||: --AUGGUGAUAAUACCUACCUCGUAGGGUUGUUGUGAGGA Med8; MNCb-2386 mmu-miR-152 21 42 -GGGUUCAAGACAGUACGUGACU- |:||:|| || ||::|||| UCUCAGGUGA--UC-UGUGCUGAG Med8; MNCb-2386 mmu-miR-181b 212 261 -GGGUGG-------------CUGUCGU-------------UACUUACAA ||:||| | || | |||||||| ACCUACCUCGUAGGGUUGUUGUGAGGAUUAAAAUGAGAAAAUGAAUGUA Med8; MNCb-2386 mmu-miR-181d 211 261 UUGGGUGG---------------CUGUUG-----------UUACUUACAA |||:||| || :|: ||||||||| UACCUACCUCGUAGGGUUGUUGUGAGGAUUAAAAUGAGAAAAUGAAUGUA Med8; MNCb-2386 mmu-miR-188 13 33 UGGGAGGUGGUACGUUCCCUAC |||||||: ||:| ||| -GCCUCCACUCU-CAGGUGAUC Med8; MNCb-2386 mmu-miR-192 279 295 -ACAGUUAAGUAUCCAGUC || |||||| |:|||| AUG-CAAUUC-UGGGUCU- Med8; MNCb-2386 mmu-miR-201 25 44 UCUUGUUAC-GGA-AUGACUCAU ::|| :|| |:|||||| ----AGGUGAUCUGUGCUGAGUU Med8; MNCb-2386 mmu-miR-202 187 222 AGAAGGGUA---------CGCG---AU--AUGGAGA |||:||| |:| || |||||| -GUUCUCAUUUGUAGAUGGUGAUAAUACCUACCUCG Med8; MNCb-2386 mmu-miR-24 27 49 GACAAGG-ACGACUUGACUCGGU || ||: ||||||::||||| GUGAUCUGUGCUGAGUUGAGCA- Med8; MNCb-2386 mmu-miR-25 22 53 -AGUC---------UGGCUCUGUUCACGUUAC- |||| :|:||| :| |||||| CUCAGGUGAUCUGUGCUGAGUUGA--GCAAUGA Med8; MNCb-2386 mmu-miR-27a 127 143 CGCCUUGAAUCGGUGACACUU- |:|| |||||||||| ---CAGCU---CCACUGUGAAU Med8; MNCb-2386 mmu-miR-27b 119 143 CGUCUUGAAUCG--GUGACACUU- |||| || ||| ||||||||| ACAGAUCUCAGCUCCACUGUGAAU Med8; MNCb-2386 mmu-miR-28 108 135 GAGUUA---UCUGACAC---UCGAGGAA |||: |||| |||||| UUCAGCAAGAGACAGAUCUCAGCUCCA- Med8; MNCb-2386 mmu-miR-330 19 49 AGAGACGUCCG--GGACACGAAA-----CG- |||| ||||: :||||||| || ACUCU-CAGGUGAUCUGUGCUGAGUUGAGCA Med8; MNCb-2386 mmu-miR-337 24 48 UUUCCG-UAGUAUAUC-CUCGACUU- |||: ||| |:|: |||:|||: -CAGGUGAUC-UGUGCUGAGUUGAGC Med8; MNCb-2386 mmu-miR-339 63 89 ACUCGAGGACCUC------CUGUCCCU- |||| || ||::|||| --UGCUCAAGGCUUAUUUAGAUGGGGAC Med8; MNCb-2386 mmu-miR-342 5 43 -CUGCC---------------CACGCUAAAGACAC-ACUCU ||||| | |:|| |||||| |||| GGACGGCAGCCUCCACUCUCAG-GUGA--UCUGUGCUGAGU Med8; MNCb-2386 mmu-miR-34c 104 140 -CGUUAGUCGA-------------UUGAUGUGACGGA || ||||| |:|| |||||: GGCUUUCAGCAAGAGACAGAUCUCAGCUCCACUGUG- Med8; MNCb-2386 mmu-miR-375 22 51 -AGUGCGCU-----CGGCUUG-CUUGUUU ||| |:|| ||:|| ||:||| CUCAGGUGAUCUGUGCUGAGUUGAGCAAU Med8; MNCb-2386 mmu-miR-412 6 37 -UGCCGAUCACCU-----GGUCCACUU--CA- ||||| || :||||||| || GACGGC-AGCCUCCACUCUCAGGUGAUCUGUG Med8; MNCb-2386 mmu-miR-434-5p 25 49 -CCA--AGUUUGGUACUCAGCUCGA ||| || : | |||||:|||| AGGUGAUCUGUGC-UGAGUUGAGCA Med8; MNCb-2386 mmu-miR-455-3p 1 14 UCACAUAUACGGGCACCUGACGUA :|||||| ||| -----------GUGUGGACGGCAG Med8; MNCb-2386 mmu-miR-464 122 160 AUAGAGU-GU-------CUUA--------UUUGAACCAU |||||| | |||| :||||||| GAUCUCAGCUCCACUGUGAAUAGCCAUUCGAACUUGGG- Med8; MNCb-2386 mmu-miR-484 154 187 UAGCCCUCCC-CUG----------ACUCGGACU |:|||| | ||| |||||||| CUUGGGAAAGUGACCUAAUAUUUCUGAGCCUGU Med8; MNCb-2386 mmu-miR-485-5p 6 19 CUUAAGUAGUGCCGGUCGGAGA |||| ||||||| --------GACGG-CAGCCUCC Med8; MNCb-2386 mmu-miR-488* 85 114 -CUGG-----UUCUU-UGUCGGAAAGUU- ||| ||||| |||| ||||||: GGACAAUAAAAAGAACACAGGCUUUCAGC Med8; MNCb-2386 mmu-miR-491 2 23 GGAGUACCUUCCCAAGG-GGUGA- :|||| || || ||||| ---UGUGGACGGCAGCCUCCACUC Med8; MNCb-2386 mmu-miR-540 156 186 GGUCCUA--GCUGG-------AGACU-GGA- :||| :|||| ||||| ||| -UGGGAAAGUGACCUAAUAUUUCUGAGCCUG Med8; MNCb-2386 mmu-miR-665 4 30 AUUCCCUGGAGUCGGAGGA------CCA- |||| |||||||| ||| ---UGGACGGCAGCCUCCACUCUCAGGUG Med8; MNCb-2386 mmu-miR-668 25 56 -CCAUC--ACCCGGCUCGGCUC---ACUGU- |||: || ||:||| ||| ||||| AGGUGAUCUGUGCUGAGUUGAGCAAUGACAU Med8; MNCb-2386 mmu-miR-670 14 33 AAGUGGUGUAUGUGAGUCC-CUA- | |||| |||||| ||| -CCUCCACU----CUCAGGUGAUC Med8; MNCb-2386 mmu-miR-672 197 223 GUGUGUGUCA----UGUGGUUGGAGU- :| |::|| |:||| |||||: -GUAGAUGGUGAUAAUACCUACCUCGU Med8; MNCb-2386 mmu-miR-673 19 48 -GAG-GUUC-CUGGUCUCGAC---ACUC- ||| ||:| ||:| | |||| |||| ACUCUCAGGUGAUCUGUGCUGAGUUGAGC Med8; MNCb-2386 mmu-miR-674 9 39 AUGU----GGUGAGGGUAG---AGUCACG- :|| ||||||:|| || |||| GGCAGCCUCCACUCUCAGGUGAUCUGUGCU Med8; MNCb-2386 mmu-miR-679 112 135 UGGUUCUCAGUGGAGUGUC-AGG- |||||| || || ||| ||| -GCAAGAGACAGAUCUCAGCUCCA Med8; MNCb-2386 mmu-miR-683 82 116 -CUCCUGUG-------------UCGAAUGUCGUCC |:||||| :|||| ||||| UGGGGACAAUAAAAAGAACACAGGCUUUCAGCAA- Med8; MNCb-2386 mmu-miR-689 63 90 CCUGGGG--CGGC----UC-GCCCCUGC :|:| ||: || :|||||| -UGCUCAAGGCUUAUUUAGAUGGGGACA Med8; MNCb-2386 mmu-miR-691 12 29 AAAAGACGGAG---AGAAGUCCUUA ||||| ||| |||| -----AGCCUCCACUCU-CAGGU-- Med8; MNCb-2386 mmu-miR-705 9 27 ACGGGUGG-GGUGGAGGGUGG || :|| |||| ||:|| GGCA-GCCUCCAC-UCUCAG- Med8; MNCb-2386 mmu-miR-711 279 297 GAAUGUAGAGAGGGGCCCAGGG- |:|| ::|:|||||:: -AUGCAA----UUCUGGGUCUUG Med8; MNCb-2386 mmu-miR-717 24 43 UCUCUUCCAUAGAGACA-GACUC- ||||: ||||| ||||| ----CAGGUGA-UCUGUGCUGAGU Med8; MNCb-2386 mmu-miR-719 30 43 UUGUAAAAAGACAUCGGCUCUA ||||| ||:||| -------AUCUGU-GCUGAGU- Med8; MNCb-2386 mmu-miR-720 102 121 ACCUCCG-GGGUCG--CUCUA |||| ::|||| |||| --CAGGCUUUCAGCAAGAGAC Med8; MNCb-2386 mmu-miR-743 264 280 AGAUGAGUCGAACCACAGAAA |||:||| |||||| --CACUUAGCAUGGUGUA--- Med8; MNCb-2386 mmu-miR-762 104 135 -CGAGACA-GG-----GCC-GGGGUCGGGG- |||:| | | | :|:||||:|| GGCUUUCAGCAAGAGACAGAUCUCAGCUCCA Med8; MNCb-2386 mmu-miR-770-3p 125 153 -GGUCGAGGUG-CAGUC--CGGGU-GC- :||||||||| || | ||| || CUCAGCUCCACUGUGAAUAGCCAUUCGA Med8; MNCb-2386 mmu-miR-7b 88 113 -UUGUUUUA---GUGUUCAGAAGGU- ||:|||| ||||:| |||:|| CAAUAAAAAGAACACAGG-CUUUCAG Med8; MNCb-2386 mmu-miR-98 205 223 -UUGUUAUGUUGAAUGAUGGAGU- :|:||||| |||||||: UGAUAAUAC------CUACCUCGU Med8; MNCb-2386 mmu-let-7a 214 221 UGAUAUGUUGGAU----------------------------GAUGGAGU |:|||: |||||||: G------AGCCUGUGUUCUCAUUUGUAGAUGGUGAUAAUACCUACCUCGU Med8; MNCb-2386 mmu-let-7b 214 221 UUGGUGUGUUGGAU----------------------------GAUGGAGU |:|||: |||||||: G-------AGCCUGUGUUCUCAUUUGUAGAUGGUGAUAAUACCUACCUCGU Med8; MNCb-2386 mmu-let-7c 214 221 ---------------------UUGGUA-UGUUGGAUGAUGGAGU :|: :| |:||: |||||||: GAGCCUGUGUUCUCAUUUGUAGAUGGUGAUAAUAC-CUACCUCGU Med8; MNCb-2386 mmu-let-7e 214 221 UGAUA-----------------------UGUUGGAGGAUGGAGU |:||: ||||||||: GAGCCUGUGUUCUCAUUUGUAGAUGGUGAUAAUA-CCUACCUCGU Med8; MNCb-2386 mmu-let-7f 214 221 UGAUA-----------------------UGUUAGAUGAUGGAGU |:||| |||||||: GAGCCUGUGUUCUCAUUUGUAGAUGGUGAUAAUAC-CUACCUCGU Med8; MNCb-2386 mmu-let-7g 214 221 UGA----------------------CAUGUUUGAUGAUGGAGU ||: ||: |||||||: GAGCCUGUGUUCUCAUUUGUAGAUGGUGAUAAUACCUACCUCGU Med8; MNCb-2386 mmu-miR-128a 133 140 UU--------------UUCUCUGGCCAA-------GUGACACU ||||||| |||||||| AACACAGGCUUUCAGCAAGAGACAGAUCUCAGCUCCACUGUGAA Med8; MNCb-2386 mmu-miR-128b 133 140 CU--------------UUCUCUGGCCAA-------GUGACACU ||||||| |||||||| AACACAGGCUUUCAGCAAGAGACAGAUCUCAGCUCCACUGUGAA Med8; MNCb-2386 mmu-miR-181b 253 260 GGGUG----------------------GCUGUCGUUACUUACAA :|| | ||||||||| CUCGUAGGGUUGUUGUGAGGAUUAAAAUGAGAA-AAUGAAUGUA Med8; MNCb-2386 mmu-miR-181d 253 260 -------------------UUGGGUG-GCUGUUGUUACUUACAA :|:: :|| || ||||||||| CUCGUAGGGUUGUUGUGAGGAUUAAAAUGAGAA-AAUGAAUGUA Med8; MNCb-2386 mmu-miR-24 177 184 GA-------------------CAA-GGACGACUU-GACUCGGU || ||| ||||||| UAGCCAUUCGAACUUGGGAAAGUGACCUAAUAUUUCUGAGCCU Med8; MNCb-2386 mmu-miR-27a 134 141 CGC--------------------CUUGAAUC--GGUGACACUU || || || |||||||||| ACACAGGCUUUCAGCAAGAGACAGAUCUCAGCUCCACUGUGAAU Med8; MNCb-2386 mmu-miR-27b 134 141 C--------------------GUCUUGAAUC--GGUGACACUU |||| || || |||||||||| ACACAGGCUUUCAGCAAGAGACAGAUCUCAGCUCCACUGUGAAU Med8; MNCb-2386 mmu-miR-484 179 186 U----------AGCCCUCCC-CU----------GACUCGGACU |:|||| | || ||||||||| GCCAUUCGAACUUGGGAAAGUGACCUAAUAUUUCUGAGCCUGU Med8; MNCb-2386 mmu-miR-98 214 221 ---------------------------UUGUUAUGUUGAAUGAUGGAGU :|:||||| |||||||: GAGCCUGUGUUCUCAUUUGUAGAUGGUGAUAAUAC------CUACCUCGU Med8; MNCb-2386 mmu-let-7a 204 221 ugaUAUGUUGGAUGAUGGAGu ||| || ||||||| gtgATAATAC---CTACCTCg Med8; MNCb-2386 mmu-let-7b 201 221 uuggugUGUUGGAU-GAUGGAGu |:|| || ||||||| atggtgATAA--TACCTACCTCg Med8; MNCb-2386 mmu-let-7c 203 221 uuggUAUGUUGGAUGAUGGAGu ||| || ||||||| ggtgATAATAC---CTACCTCg Med8; MNCb-2386 mmu-let-7e 202 221 ugauaUGUUGGAGGAUGGAGu |:|| : |||||||| tggtgATAA-TACCTACCTCg Med8; MNCb-2386 mmu-let-7f 202 221 ugauaUGUUA-GAUGAUGGAGu |:||| | ||||||| tggtgATAATAC--CTACCTCg Med8; MNCb-2386 mmu-let-7g 201 221 UGACAUGUUUGAUGAUGGAGu |: ||: ||: ||||||| ATGGTGATAATACCTACCTCg Med8; MNCb-2386 mmu-miR-128a 114 140 UUUUC--UCUGG---CCAAGUGACACU ||:|| |||:| | | |||||||| AAGAGACAGATCTCAGCTCCACTGTGA Med8; MNCb-2386 mmu-miR-128b 116 140 CUUUCUCUGG---CCAAGUGACACU ||:| |||:| | | |||||||| GAGACAGATCTCAGCTCCACTGTGA Med8; MNCb-2386 mmu-miR-133a 68 91 UGUCGACCAA--CUUCCCCUGGUu | :||| || || |||||| | AAGGCTTATTTAGATGGGGACAAt Med8; MNCb-2386 mmu-miR-133b 69 91 auCGACCAA--CUUCCCCUGGUu ||| || || |||||| | agGCTTATTTAGATGGGGACAAt Med8; MNCb-2386 mmu-miR-137 32 52 GAUGCGCAUAAGAAUUCGUUAUU ||::|| | ||:||||||:| CTGTGCTGA--GTTGAGCAATGA Med8; MNCb-2386 mmu-miR-146b 180 193 UCGGAUACCUUAAGUCAAGAGU |||||:| ||||||| AGCCTGT--------GTTCTCA Med8; MNCb-2386 mmu-miR-150 216 237 guGACCAUGUUCC--CAACCCUCu || || |:|| |||| ||| acCTCGT--AGGGTTGTTGTGAGg Med8; MNCb-2386 mmu-miR-152 22 40 GGGUUCAAGACAGUACGUGACU |:||:| || : ||::|||| CTCAGG---TGATCTGTGCTGA Med8; MNCb-2386 mmu-miR-188 12 32 UGGGAGGUGGUACGUUCCCUAc | |||||||: | ||:| ||| AGCCTCCACTCT-CAGGTGATc Med8; MNCb-2386 mmu-miR-192 276 295 ACA---GUUAAGUAUCCAGuc ||| |||||| |:|||| TGTATGCAATTC-TGGGTCtt Med8; MNCb-2386 mmu-miR-201 20 43 ucuuGU-UAC-GGA-AUGACUCAu || :|| :|| |:|||||| ctctCAGGTGATCTGTGCTGAGTt Med8; MNCb-2386 mmu-miR-202 186 217 AGAAGGGUA---------CGCGA-UAUGGAga | |||:||| |:| | |||||| TGTTCTCATTTGTAGATGGTGATAATACCTac Med8; MNCb-2386 mmu-miR-24 163 184 gacaaggacgacuuGACUCGGu ||||||| gtgacctaatatttCTGAGCCt Med8; MNCb-2386 mmu-miR-24 27 49 gACAAGG-ACGACUUGACUCGgu || ||: ||||||::||||| gTGATCTGTGCTGAGTTGAGCaa Med8; MNCb-2386 mmu-miR-25 31 51 AGUC-UGGCUCUGUUCACGUUAC || | :|:||| : | |||||| TCTGTGCTGAGTT--GAGCAATG Med8; MNCb-2386 mmu-miR-27a 119 141 cGCCUUGAAUC--GGUGACACUU | || || || |||||||||| aCAGATCTCAGCTCCACTGTGAA Med8; MNCb-2386 mmu-miR-27b 119 141 cGUCUUGAAUC--GGUGACACUU |||| || || |||||||||| aCAGATCTCAGCTCCACTGTGAA Med8; MNCb-2386 mmu-miR-28 111 135 gaGUUAUCUGAC---ACUCGAGGaa ||| |||| | | |||||| agCAAGAGACAGATCTCAGCTCCac Med8; MNCb-2386 mmu-miR-337 23 46 uuUCCG-UAGUAUAU-CCUCGACUu |||: ||| |:|: |||:||| tcAGGTGATC-TGTGCTGAGTTGAg Med8; MNCb-2386 mmu-miR-339 68 87 acuCGAGGACCUCCUGUCCCU |||: | | ||::|||| aagGCTTATTTA-GATGGGGA Med8; MNCb-2386 mmu-miR-342 22 42 cuGCCCACGCUAAAGACAC-ACUCu | ||| || |||||| |||| ctCAGGT--GA--TCTGTGCTGAGt Med8; MNCb-2386 mmu-miR-34c 112 140 CGUU---AGUC--GA-UUGAUGUGACgga |||| ||| || |:|| ||||| GCAAGAGACAGATCTCAGCTCCACTGtga Med8; MNCb-2386 mmu-miR-375 23 50 AGUGCGCU-----CGGCUU-GCUUGUUu ||| |:|| ||:||: :||:||| TCAGGTGATCTGTGCTGAGTTGAGCAAt Med8; MNCb-2386 mmu-miR-412 7 33 UGCCGAUC--ACCUG---GUCCACUuca ||||| || | || ||||||| ACGGC-AGCCTCCACTCTCAGGTGAtct Med8; MNCb-2386 mmu-miR-434-5p 26 48 CCA--AGUUUGGUACUCAGCUCGa ||| || : | |||||:|||| GGTGATCTGTGC-TGAGTTGAGCa Med8; MNCb-2386 mmu-miR-464 122 160 aUAGAGU----GU----CUUAU--------UUGAACCau |||||| || ||||| ||||||| gATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGga Med8; MNCb-2386 mmu-miR-484 154 186 uAGCCC-UCCCCU----------GACUCGGACu |:||| | | || ||||||||| cTTGGGAAAGTGACCTAATATTTCTGAGCCTGt Med8; MNCb-2386 mmu-miR-485-5p 1 18 cuuaaguagUGCCGGUCGGAGa |||| ||||||| ---gtgtggACGG-CAGCCTCc Med8; MNCb-2386 mmu-miR-488* 91 112 cuggUUCUU-UGUCGGAAAGUu ||||| |||| |||||| taaaAAGAACACAGGCTTTCAg Med8; MNCb-2386 mmu-miR-491 1 21 ggaguACCUUCC--CAAGGGGUGA |||| || | |:||||| --gtgTGGACGGCAG-CCTCCACT Med8; MNCb-2386 mmu-miR-540 154 184 GGUCC---UAGCUGG-------AGACU-GGA |: || | :|||| ||||| ||| CTTGGGAAAGTGACCTAATATTTCTGAGCCT Med8; MNCb-2386 mmu-miR-665 1 22 auucCCUGGAGUCGGAGGacca |||| |||||||| gtgtGGACGGCAGCCTCCactc Med8; MNCb-2386 mmu-miR-668 26 54 CCAU--CACCCGGCUCGGCUC---ACUGU |||: || ||:|||::||| ||||| GGTGATCTGTGCTGAGTTGAGCAATGACA Med8; MNCb-2386 mmu-miR-670 9 31 aaGU-GGUGUAUGUGAGUCC-CUA || || | || |||||| ||| ggCAGCCTC-CACTCTCAGGTGAT Med8; MNCb-2386 mmu-miR-672 196 221 gugUGUGUCA----UGUGGUUGGAGu | |::|| |:||| ||||| tgtAGATGGTGATAATACCTACCTCg Med8; MNCb-2386 mmu-miR-673 20 46 GAG-GUUC-CUGGUCUCGAC---ACUC ||| ||:| ||:| | |||| |||| CTCTCAGGTGATCTGTGCTGAGTTGAG Med8; MNCb-2386 mmu-miR-674 6 30 aUGUGGU--GAGGGUAGAGU-CACg ||: || |||| ||||| ||| gACGGCAGCCTCCACTCTCAGGTGa Med8; MNCb-2386 mmu-miR-679 111 133 UGGUUCUCAGUGGAGUGUC-AGG | |||||| || || ||| ||| AGCAAGAGACAGATCTCAGCTCC Med8; MNCb-2386 mmu-miR-683 95 116 cUCCUGUGU-CGAAUGUCGUcc || ||||| |||| ||||| aAGAACACAGGCTTTCAGCAag Med8; MNCb-2386 mmu-miR-689 70 89 CCUGGGGCGGCUC-GCCCCUGc || |:: :: || :|||||| GG--CTTATTTAGATGGGGACa Med8; MNCb-2386 mmu-miR-691 7 30 aaaaGACGGA-GAGA-AGUCCuua | |||| | || ||||| acggCAGCCTCCACTCTCAGGtga Med8; MNCb-2386 mmu-miR-705 8 27 aCGGGUGGGGUGGAGGGUgg | | :||:| |||:|| cGGCAGCCTCCACTCTCAgg Med8; MNCb-2386 mmu-miR-711 266 295 GAAU-GU---AGAGAGG----GGCCCAGgg |||| || | | | | |:||||| CTTAGCATGGTGTATGCAATTCTGGGTCtt Med8; MNCb-2386 mmu-miR-717 20 41 ucucuUCCAUAGAGACA-GACUC ||||: ||||| ||||| ctctcAGGTG-ATCTGTGCTGAG Med8; MNCb-2386 mmu-miR-719 23 43 uuguaaaaAGACAUCGGCUCua ||||| ||:||| tcaggtgaTCTGT-GCTGAGtt Med8; MNCb-2386 mmu-miR-720 100 118 accUCCG-GGGUCGCUCUa |||| ::|||| ||| cacAGGCTTTCAGCAAGAg Med8; MNCb-2386 mmu-miR-743 262 282 agaUGAGUCGAACCACAGAaa |||:||| |||||| | aacACTTAGCATGGTGTATgc Med8; MNCb-2386 mmu-miR-762 112 133 cgagacagGGCCGGGGUCGGGG | | :|:||||:|| gcaagagaCAGATCTCAGCTCC Med8; MNCb-2386 mmu-miR-770-3p 119 136 gGUCGAGGUGCAGUCCGGGUGc ||| || |||| :|||| aCAGATC----TCAGCTCCACt Med8; MNCb-2386 mmu-miR-7b 92 111 UUGUUUUAGUGUUCAGAAGGU || ||:| ||| || |||:|| AAAAAGAACAC-AGGCTTTCA Med8; MNCb-2386 mmu-miR-98 206 221 uUGUUAUGUUGAAUGAUGGAGu |:||||| ||||||| gATAATAC------CTACCTCg

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Med8 RAID00000897 mmu-miR-652-5p miRNA MIMAT0017260 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID00020303 mmu-miR-98-5p miRNA MIMAT0000545 Med8 mRNA 80509 CLIP-seq//Prediction 0.6478 Med8 RAID00091615 mmu-miR-6410 miRNA MIMAT0025163 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID00134055 mmu-miR-181a-5p miRNA MIMAT0000210 Med8 mRNA 80509 NGS (Next Generation Sequencing)//CLIP-seq//Prediction 0.7353 Med8 RAID00253205 mmu-let-7i-5p miRNA MIMAT0000122 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID00310927 mmu-miR-181c-5p miRNA MIMAT0000674 Med8 mRNA 80509 CLIP-seq//Prediction 0.6478 Med8 RAID00380670 mmu-miR-882 miRNA MIMAT0004847 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID00414525 mmu-miR-346-3p miRNA MIMAT0017039 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID00425730 mmu-miR-544-3p miRNA MIMAT0004941 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID00445674 mmu-miR-195a-5p miRNA MIMAT0000225 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID00485407 mmu-let-7a-5p miRNA MIMAT0000521 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID00587966 mmu-miR-7b-5p miRNA MIMAT0000678 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID00668287 mmu-miR-27b-3p miRNA MIMAT0000126 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID00680143 mmu-let-7g-5p miRNA MIMAT0000121 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID00689512 mmu-miR-16-5p miRNA MIMAT0000527 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID00979098 mmu-miR-15b-5p miRNA MIMAT0000124 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01099480 mmu-miR-27a-3p miRNA MIMAT0000537 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01233549 mmu-miR-7211-5p miRNA MIMAT0028390 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01263093 mmu-miR-7051-3p miRNA MIMAT0028007 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01275067 mmu-miR-148b-5p miRNA MIMAT0017036 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01370923 mmu-miR-1933-5p miRNA MIMAT0009396 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01390898 mmu-miR-484 miRNA MIMAT0003127 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01467184 mmu-miR-296-3p miRNA MIMAT0004576 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID01580248 mmu-let-7b-5p miRNA MIMAT0000522 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID01672212 mmu-miR-488-3p miRNA MIMAT0003450 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID01802730 mmu-miR-18a-3p miRNA MIMAT0004626 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01854316 mmu-miR-471-3p miRNA MIMAT0017195 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01883803 mmu-miR-6369 miRNA MIMAT0025113 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01943341 mmu-miR-148a-5p miRNA MIMAT0004617 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID01980462 mmu-miR-6922-3p miRNA MIMAT0027745 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02055377 mmu-miR-181d-5p miRNA MIMAT0004324 Med8 mRNA 80509 CLIP-seq//Prediction 0.6559 Med8 RAID02071200 mmu-miR-1193-3p miRNA MIMAT0005851 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02075534 mmu-let-7d-5p miRNA MIMAT0000383 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID02117715 mmu-miR-322-5p miRNA MIMAT0000548 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02199597 mmu-let-7e-5p miRNA MIMAT0000524 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID02273270 mmu-miR-7001-5p miRNA MIMAT0027904 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02295465 mmu-miR-5124b miRNA MIMAT0025136 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02318237 mmu-miR-15a-5p miRNA MIMAT0000526 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02471629 mmu-miR-7069-3p miRNA MIMAT0028045 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02603982 mmu-miR-6361 miRNA MIMAT0025104 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02614847 mmu-miR-6413 miRNA MIMAT0025166 Med8 mRNA 80509 Prediction 0.2202 Med8 RAID02637885 mmu-miR-24-3p miRNA MIMAT0000219 Med8 mRNA 80509 Prediction 0.2202 Med8 RAID02674690 mmu-let-7c-5p miRNA MIMAT0000523 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID02681962 mmu-miR-143-3p miRNA MIMAT0000247 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02700219 mmu-miR-412-3p miRNA MIMAT0001094 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02714782 mmu-miR-497a-5p miRNA MIMAT0003453 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02720791 mmu-miR-342-3p miRNA MIMAT0000590 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID02844368 mmu-miR-3098-3p miRNA MIMAT0014918 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID02986336 mmu-miR-370-5p miRNA MIMAT0017174 Med8 mRNA 80509 Prediction 0.2202 Med8 RAID03270119 mmu-miR-181b-5p miRNA MIMAT0000673 Med8 mRNA 80509 CLIP-seq//Prediction 0.6478 Med8 RAID03308574 mmu-let-7f-5p miRNA MIMAT0000525 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID03344900 mmu-miR-485-5p miRNA MIMAT0003128 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03379476 mmu-miR-6902-5p miRNA MIMAT0027704 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03399835 mmu-miR-370-3p miRNA MIMAT0001095 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03432545 mmu-miR-543-3p miRNA MIMAT0003168 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308 Med8 RAID03540938 mmu-miR-7a-5p miRNA MIMAT0000677 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03614271 mmu-miR-421-3p miRNA MIMAT0004869 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03782781 mmu-miR-3064-3p miRNA MIMAT0014835 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03812062 mmu-miR-128-3p miRNA MIMAT0000140 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03864700 mmu-miR-448-3p miRNA MIMAT0001533 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03865259 mmu-miR-7035-3p miRNA MIMAT0027975 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03910550 mmu-miR-590-3p miRNA MIMAT0004896 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03921795 mmu-miR-1983 miRNA MIMAT0009455 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03952954 mmu-miR-5626-5p miRNA MIMAT0022381 Med8 mRNA 80509 Prediction 0.1828 Med8 RAID03952964 mmu-miR-1961 miRNA MIMAT0009434 Med8 mRNA 80509 CLIP-seq//Prediction 0.6308