DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000556 | mmu-miR-324-3p | 18002 | Nedd8 | ucgucGUGGACCC-CGUCACc | | || ||| |||||| | gaggaCCCCAGGGUGCAGUGu | 2 | 16 | 138 | 158 | [mm9:14:56281208-56281228:-] | 0.7564 | 123 | 6 | -21.48 | -0.3217 |
MIMAT0004640 | mmu-miR-325 | 18002 | Nedd8 | aacuauccuCCACGAGUUAUUu | ||| ||||||| | uguauccuuGGUUAUCAAUAAa | 2 | 14 | 231 | 252 | [mm9:14:56281114-56281135:-] | 0.7564 | 149 | 7 | -10.10 | -1.3493 |
MIMAT0002105 | mmu-miR-464 | 18002 | Nedd8 | auagagugucuUAUUUGAACCAu | | ||||||||| | -----------AGAAACUUGGUu | 2 | 13 | 1 | 12 | [mm9:14:56281354-56281365:-] | 0.6686 | 152 | 7 | -11.78 | -0.5742 |
MIMAT0002105 | mmu-miR-464 | 18002 | Nedd8 | auAGAGUGUC-UUAUUUGAACCAu | |||:|::| :|| |||||| | ugUCUUAUGGCUGUAUCCUUGGUu | 2 | 22 | 220 | 243 | [mm9:14:56281123-56281146:-] | 0.7564 | 132 | 6 | -17.73 | -0.1546 |
MIMAT0002109 | mmu-miR-468 | 18002 | Nedd8 | gucugugugcguguaGUCAGUAu | ||||||| | uuggguuuuaguuugCAGUCAUg | 2 | 9 | 187 | 209 | [mm9:14:56281157-56281179:-] | 0.7564 | 140 | 7 | -13.17 | -0.9711 |
MIMAT0004760 | mmu-miR-470* | 18002 | Nedd8 | agaAGAGUCUUUCCAUGACCAa | |||:: : : ||||||| | caaUCUUGUGUGUCUACUGGUg | 2 | 20 | 107 | 128 | [mm9:14:56281238-56281259:-] | 0.7574 | 147 | 7 | -11.12 | -0.4215 |
MIMAT0004781 | mmu-miR-532-3p | 18002 | Nedd8 | acguuCGGAACCCACACCCUCc | |:|| | ||||||| | uguguGUCUACUG-GUGGGAGa | 2 | 18 | 113 | 133 | [mm9:14:56281233-56281253:-] | 0.7574 | 143 | 7 | -18.83 | -0.9872 |
MIMAT0004188 | mmu-miR-802 | 18002 | Nedd8 | uuCCUAC---UUAGAA---ACA-AUGACu | ||||| |||||| ||| ||||| | uuGGAUGCCCAAUCUUGUGUGUCUACUGg | 2 | 21 | 98 | 126 | [mm9:14:56281240-56281268:-] | 0.7574 | 130 | 0 | -18.72 | -0.5044 |
MIMAT0003898 | mmu-miR-760 | 18002 | Nedd8 | agGGGUGUCUG-GGUCUCGGc | |:| :||| |||||||| | cuCUCUGGGACACCAGAGCCa | 2 | 19 | 65 | 85 | [mm9:14:56281281-56281301:-] | 0.7584 | 157 | 7 | -25.65 | -0.6598 |
MIMAT0003481 | mmu-miR-695 | 18002 | Nedd8 | aagucAGUGGA--UACGGGUUAGa | || |:| |||||||||| | cccccUCUCUUGGAUGCCCAAUCu | 2 | 18 | 89 | 112 | [mm9:14:56281254-56281277:-] | 0.7584 | 160 | 7 | -20.43 | -0.9906 |
MIMAT0003481 | mmu-miR-695 | 18002 | Nedd8 | aagucaguggauacgGGUUAGa | |||||| | uaccuccuugcccugCCAAUCa | 2 | 8 | 18 | 39 | [mm9:14:56281327-56281348:-] | 0.7135 | 120 | 6 | -14.24 | -0.1524 |
MIMAT0004837 | mmu-miR-615-5p | 18002 | Nedd8 | cuaggCUCGUG-GCCCCUGGGGg | ||| |: :| ||||||| | gguggGAGAAUGUGAGGACCCCa | 2 | 18 | 125 | 147 | [mm9:14:56281219-56281241:-] | 0.7564 | 152 | 7 | -24.46 | -1.0700 |
MIMAT0004849 | mmu-miR-883a-3p | 18002 | Nedd8 | uaUGACUCUCGA-C-AACGUCAau | |:||:| :| | ||||||| | cuAUUGGGUUUUAGUUUGCAGUca | 3 | 21 | 184 | 207 | [mm9:14:56281159-56281182:-] | 0.7564 | 134 | 0 | -15.48 | -0.2416 |
MIMAT0004851 | mmu-miR-883b-3p | 18002 | Nedd8 | uaUGACUCUCUA-C-AACGUCAau | |:||:| | | ||||||| | cuAUUGGGUUUUAGUUUGCAGUca | 3 | 21 | 184 | 207 | [mm9:14:56281159-56281182:-] | 0.7564 | 130 | 0 | -14.27 | -0.2416 |
MIMAT0004861 | mmu-miR-877 | 18002 | Nedd8 | gggacgcgGUAGAGGAGAug | ||| |||||| | uggcaucaCAUAUCCUCUca | 3 | 13 | 45 | 64 | [mm9:14:56281302-56281321:-] | 0.7584 | 132 | 0 | -14.89 | -0.1115 |
MIMAT0007876 | mmu-miR-1907 | 18002 | Nedd8 | uggaGGUCUA--GGAGACGA-CGAg | |||||| || ||||| ||| | uggcCCAGAUGGCCCCUGCUGGCUa | 2 | 19 | 162 | 186 | [mm9:14:56281180-56281204:-] | 0.7564 | 133 | 0 | -23.03 | -0.9286 |
MIMAT0009426 | mmu-miR-1955 | 18002 | Nedd8 | uuuucgacgucacGU-AG-GACCCUGa | || || ||||||| | ucacauauccucuCACUCUCUGGGACa | 2 | 13 | 50 | 76 | [mm9:14:56281290-56281316:-] | 0.7584 | 142 | 7 | -15.57 | -1.0322 |
MIMAT0009431 | mmu-miR-1958 | 18002 | Nedd8 | ugaaugacgaaggugAAAGGAu | |||||| | guuaucaauaaaauaUUUCCUg | 2 | 8 | 241 | 262 | [mm9:14:56281104-56281125:-] | 0.7564 | 120 | 6 | -9.14 | -0.8087 |
MIMAT0009460 | mmu-miR-1982.1 | 18002 | Nedd8 | gacACCCUCUU-GUAUCCCAC-UCu | || |||:| | |||||| || | gaaUGUGAGGACCCCAGGGUGCAGu | 2 | 21 | 132 | 156 | [mm9:14:56281210-56281234:-] | 0.7564 | 127 | 0 | -21.35 | -0.2044 |
MIMAT0011214 | mmu-miR-2138 | 18002 | Nedd8 | uaaGGCGGUUCGGGC-AAGGGAa | | |:|| |: :| |||||| | uugCAGUCAUGUGUGCUUCCCUg | 2 | 20 | 199 | 221 | [mm9:14:56281145-56281167:-] | 0.7564 | 123 | 6 | -17.34 | -1.1141 |
MIMAT0012773 | mmu-miR-767 | 18002 | Nedd8 | acgagucUGUUGGUAC-CACGu | :||::|||| |||| | uuaguuuGCAGUCAUGUGUGCu | 2 | 15 | 194 | 215 | [mm9:14:56281151-56281172:-] | 0.7564 | 122 | 0 | -18.19 | -0.8420 |
MIMAT0015643 | mmu-miR-3472 | 18002 | Nedd8 | ccaaggaaggucGAAGACCGAUAAu | || ||||||||| | cccagauggcccCUGCUGGCUAUUg | 2 | 14 | 165 | 189 | [mm9:14:56281177-56281201:-] | 0.7564 | 157 | 7 | -21.36 | -0.4672 |
MIMAT0000125 | mmu-miR-23b | 18002 | Nedd8 | ccAUUAGGGACC-GUUACACUa | || | : || ||||||| | ucUACUGGUGGGAGAAUGUGAg | 2 | 20 | 119 | 140 | [mm9:14:56281226-56281247:-] | 0.7574 | 142 | 7 | -13.65 | -0.2438 |
MIMAT0000149 | mmu-miR-137 | 18002 | Nedd8 | gaugcGCAUAAGAAU---UCGUUAUu | :|||| |||: | ||||| | auggcUGUAUCCUUGGUUAUCAAUAa | 2 | 19 | 226 | 251 | [mm9:14:56281115-56281140:-] | 0.7564 | 125 | 0 | -12.73 | -0.3044 |
MIMAT0000153 | mmu-miR-141 | 18002 | Nedd8 | gguagaaauGGUC---UGUCACAAu | |||| :||||||| | gugaggaccCCAGGGUGCAGUGUUc | 2 | 14 | 136 | 160 | [mm9:14:56281206-56281230:-] | 0.7564 | 144 | 7 | -15.26 | -0.2047 |
MIMAT0000220 | mmu-miR-190 | 18002 | Nedd8 | uggAUUAUAUAGU-UUGUAUAGu | ||||:|: || ||||||| | ucaUAAUGUGGCAUCACAUAUCc | 2 | 20 | 37 | 59 | [mm9:14:56281307-56281329:-] | 0.7584 | 162 | 7 | -13.49 | -0.5917 |
MIMAT0000221 | mmu-miR-191 | 18002 | Nedd8 | gucgacgaaAACCCUAAGGCAAc | |||| ||||||| | ---agaaacUUGG--UUCCGUUu | 2 | 15 | 1 | 18 | [mm9:14:56281348-56281365:-] | 0.6686 | 147 | 7 | -13.00 | -0.8204 |
MIMAT0000381 | mmu-miR-34c | 18002 | Nedd8 | cguUAGUCGAUUGAUGUGACGGa | | ||| |:| ||||||| | gacACCAG--AGC--CACUGCCc | 2 | 21 | 73 | 91 | [mm9:14:56281275-56281293:-] | 0.7584 | 142 | 7 | -14.77 | -0.2964 |
MIMAT0000382 | mmu-miR-34b-5p | 18002 | Nedd8 | uguuagucgauuaauGUGACGGa | ||||||| | cugggacaccagagcCACUGCCc | 2 | 9 | 69 | 91 | [mm9:14:56281275-56281297:-] | 0.7584 | 140 | 7 | -16.98 | -0.3164 |
MIMAT0000519 | mmu-miR-200a | 18002 | Nedd8 | uguagcaauGGUC---UGUCACAAu | |||| :||||||| | gugaggaccCCAGGGUGCAGUGUUc | 2 | 14 | 136 | 160 | [mm9:14:56281206-56281230:-] | 0.7564 | 144 | 7 | -15.23 | -0.2047 |
MIMAT0000532 | mmu-miR-23a | 18002 | Nedd8 | ccuuuagggaccgUUACACUa | ||||||| | cuacuggugggagAAUGUGAg | 2 | 9 | 120 | 140 | [mm9:14:56281226-56281246:-] | 0.7574 | 140 | 7 | -13.45 | -0.2438 |
MIMAT0000535 | mmu-miR-29a | 18002 | Nedd8 | auuggCUAAAGUC--UAC-CACGAu | | || ||| ||| ||||| | uuuuaGUUUGCAGUCAUGUGUGCUu | 2 | 18 | 192 | 216 | [mm9:14:56281150-56281174:-] | 0.7564 | 120 | 0 | -12.36 | -0.5830 |
MIMAT0000542 | mmu-miR-34a | 18002 | Nedd8 | uguugGUCGAUUCUGUGACGGu | || | :|| ||||||| | ugggaCACCAGAGCCACUGCCc | 2 | 18 | 70 | 91 | [mm9:14:56281275-56281296:-] | 0.7584 | 157 | 7 | -21.44 | -0.3137 |
MIMAT0000661 | mmu-miR-214 | 18002 | Nedd8 | ugacGGACAGACACGGACGACa | || | : | ||||||| | uggcCCAGAUGGCCCCUGCUGg | 2 | 19 | 162 | 183 | [mm9:14:56281183-56281204:-] | 0.7564 | 146 | 7 | -19.65 | -0.3268 |
MIMAT0000677 | mmu-miR-7a | 18002 | Nedd8 | uguuguuUUAGUGAUCA-GAAGGu | |:|||: || ||||| | aguuugcAGUCAUGUGUGCUUCCc | 2 | 17 | 196 | 219 | [mm9:14:56281147-56281170:-] | 0.7564 | 120 | 0 | -12.44 | -0.6718 |
MIMAT0000678 | mmu-miR-7b | 18002 | Nedd8 | uguuguuUUAGUGUUCA-GAAGGu | |:|||:: || ||||| | aguuugcAGUCAUGUGUGCUUCCc | 2 | 17 | 196 | 219 | [mm9:14:56281147-56281170:-] | 0.7564 | 124 | 0 | -13.55 | -0.6718 |
MIMAT0004747 | mmu-miR-411 | 18002 | Nedd8 | gcaUGCGAUAUGCCAGAUGAu | |: :|:|:: ||||||| | ccaAUCUUGUGU-GUCUACUg | 2 | 19 | 106 | 125 | [mm9:14:56281241-56281260:-] | 0.7574 | 148 | 7 | -15.22 | -0.5979 |
MIMAT0001542 | mmu-miR-449a | 18002 | Nedd8 | uggucgaUUGU-UAUGUGACGGu | | || | ||||||| | cugggacACCAGAGCCACUGCCc | 2 | 16 | 69 | 91 | [mm9:14:56281275-56281297:-] | 0.7584 | 142 | 7 | -17.76 | -0.3137 |
MIMAT0003893 | mmu-miR-761 | 18002 | Nedd8 | acacaGUCAAAGUGGGACGACg | ||| | |||||||| | uggccCAGAUGGCCCCUGCUGg | 2 | 18 | 162 | 183 | [mm9:14:56281183-56281204:-] | 0.7564 | 153 | 7 | -20.48 | -0.3241 |
MIMAT0003460 | mmu-miR-449c | 18002 | Nedd8 | ggucgaUCGUUAC-GUGACGGa | | ||: | ||||||| | ugggacACCAGAGCCACUGCCc | 2 | 16 | 70 | 91 | [mm9:14:56281275-56281296:-] | 0.7584 | 146 | 7 | -20.07 | -0.3137 |
MIMAT0004852 | mmu-miR-190b | 18002 | Nedd8 | uuGGGUUAUA--GU-UUGUAUAGu | | :|||:| || ||||||| | auCAUAAUGUGGCAUCACAUAUCc | 2 | 20 | 36 | 59 | [mm9:14:56281307-56281330:-] | 0.7584 | 149 | 7 | -10.55 | -0.5991 |
MIMAT0004896 | mmu-miR-590-3p | 18002 | Nedd8 | ugAUCGAAUAUGUAUUUUAau | | | |||| ||||||| | ccUUGGUUAUCAAUAAAAUau | 3 | 20 | 236 | 256 | [mm9:14:56281110-56281130:-] | 0.7564 | 143 | 0 | -6.49 | -0.1722 |
MIMAT0005447 | mmu-miR-449b | 18002 | Nedd8 | cgGUCGAUUGUUGUGACGGa | || | |: : ||||||| | gaCA-CCAGAGCCACUGCCc | 2 | 19 | 73 | 91 | [mm9:14:56281275-56281293:-] | 0.7584 | 144 | 7 | -18.96 | -0.3164 |
MIMAT0004936 | mmu-miR-873 | 18002 | Nedd8 | uccUCUGAGUGUU-CAAGGACg | ||: | :||: ||||||| | cccAGGGU-GCAGUGUUCCUGg | 2 | 19 | 144 | 164 | [mm9:14:56281202-56281222:-] | 0.7564 | 147 | 7 | -16.45 | -0.2186 |
MIMAT0004936 | mmu-miR-873 | 18002 | Nedd8 | uccucugaguguucAAGGACg | |||||| | uaucaauaaaauauUUCCUG- | 2 | 8 | 243 | 262 | [mm9:14:56281104-56281123:-] | 0.7564 | 120 | 6 | -6.83 | -0.7979 |