DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Brca1 ATTTA 64-5502 5502-5506

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004521 mmu-miR-15b* 12189 Brca1 aucucGUCGU-UUAUUA-CUAAGc | |:| |||:|| ||||| cauguCUGUACAAUGAUGGAUUCc 2 18 711 734 [mm9:11:101350347-101350370:-] 0.6868 124 0 -9.00 -0.8159 MIMAT0004522 mmu-miR-27b* 12189 Brca1 caaGUGGU--UAGUCGAUUCG-AGa |||:: ||||| ||||| || agaCACUGUCAUCAG-UAAGCGUCa 2 20 1233 1256 [mm9:11:101357971-101357994:-] 0.5990 124 0 -15.52 -0.4806 MIMAT0004523 mmu-miR-29b* 12189 Brca1 auUUGGUGGUAUACUUUGGUCg | ||:|| : ||||||| gcAUCCGCCUGGAAAAACCAGc 2 21 82 103 [mm9:11:101350978-101350999:-] 0.6123 152 7 -22.09 -0.4185 MIMAT0004526 mmu-miR-101a* 12189 Brca1 cguagucgugacacUAUUGACu ||||||| ugccguucccaacaAUAACUGa 2 9 1397 1418 [mm9:11:101357809-101357830:-] 0.5143 140 7 -11.54 -0.5972 MIMAT0004527 mmu-miR-124* 12189 Brca1 uaGUUCCAGGCGACACUUGUGc ::| |||:|: ||||||| uuUGAAGUCUGUCUUGAACACa 2 21 155 176 [mm9:11:101350905-101350926:-] 0.6123 160 7 -17.15 -1.1574 MIMAT0004530 mmu-miR-127* 12189 Brca1 uagucucgggagACUCGAAGUc ||||||||| uauuuguagaggUGAGCUUCAg 2 11 1193 1214 [mm9:11:101358013-101358034:-] 0.5963 150 7 -22.37 -0.3175 MIMAT0004530 mmu-miR-127* 12189 Brca1 uagucucgggagacUCGAAGUc ||||||| agaaaguuguagacAGCUUCAc 2 9 531 552 [mm9:11:101358675-101358696:-] 0.5387 140 7 -11.05 -0.1187 MIMAT0000143 mmu-miR-9* 12189 Brca1 ugAAAG-CCAAUAGAUCGAAAUa |||| | | ||||||| guUUUCACCUGAGAAAGCUUUAu 2 21 181 203 [mm9:11:101350878-101350900:-] 0.6123 143 7 -9.64 -0.7086 MIMAT0000152 mmu-miR-140* 12189 Brca1 ggcACC-AAGAUGGGACACCAu ||| || : :||||||| agaUGGCUUGAGAUCUGUGGUu 2 19 437 458 [mm9:11:101350623-101350644:-] 0.5331 149 7 -18.10 -0.4094 MIMAT0004533 mmu-miR-141* 12189 Brca1 agGUUGUGACG--UGA---CCUUCUac :||: :||| :|| |||||| aaUAAUUUUGCUUGCUGAAGGAAGAga 3 21 813 839 [mm9:11:101350242-101350268:-] 0.6868 126 0 -14.24 -0.2221 MIMAT0004534 mmu-miR-145* 12189 Brca1 guUCUUGUCAUAA--AGGUCCUUa | :|::| ||| ||||||| caAUGAUGG-AUUCCACCAGGAAa 2 21 721 743 [mm9:11:101350338-101350360:-] 0.6868 145 7 -12.69 -1.0081 MIMAT0004542 mmu-miR-191* 12189 Brca1 cccuugcuuuAGGUUCAC-GUCg |:|||||| ||| ugugagguuuUUCAAGUGCCAGu 2 13 580 602 [mm9:11:101350479-101350501:-] 0.5239 120 0 -17.92 -0.6939 MIMAT0004572 mmu-miR-290-3p 12189 Brca1 cccGAAUUUUGAUCCGCCGUGAAa ||| | ||:| ||||||| aguCUU-UACCUGGUAGGCACUUg 2 22 47 69 [mm9:11:101359158-101359180:-] 0.5236 155 7 -17.81 -0.3103 MIMAT0000370 mmu-miR-292-3p 12189 Brca1 ugUGAGUUUUGGACCG-CCGUGAAa | || ||||||: ||||||| uuAGUCUUUACCUGGUAGGCACUUg 2 23 45 69 [mm9:11:101359158-101359182:-] 0.5236 165 7 -26.42 -0.3077 MIMAT0004580 mmu-miR-34c* 12189 Brca1 ggaCCGACACACCAAU-CACUAa | || |||| || ||||| ucaGCCUCUGUGCCUAGGUGAUu 2 20 1512 1534 [mm9:11:101357693-101357715:-] 0.5631 127 0 -16.94 -0.4687 MIMAT0004583 mmu-miR-130b* 12189 Brca1 ucaucaCGUUGUC--CCUUUCUCa ||| : | |||||||| aucacaGCAUUUGGUGGAAAGAGa 2 17 305 328 [mm9:11:101350753-101350776:-] 0.4699 147 7 -16.59 -0.2749 MIMAT0004583 mmu-miR-130b* 12189 Brca1 ucauCACGUUGU-CCCUUUCUCa |||| || ||||||| uuguGUGCCCCAUAAGAAAGAGa 2 19 158 180 [mm9:11:101359047-101359069:-] 0.5956 149 7 -14.64 -0.8836 MIMAT0004620 mmu-let-7a* 12189 Brca1 ccuuUCUGUCAUCUAACAUAUc | :: ||: :||||||| gggcAUGUCGUGAGUUGUAUAu 2 19 330 351 [mm9:11:101350730-101350751:-] 0.4700 150 7 -10.65 -0.1333 MIMAT0004621 mmu-let-7b* 12189 Brca1 ccCUUCCGUCAUCCAACAUAUc | | |: ||: |||||||| ggGCAUGUCGUGAGUUGUAUAu 2 21 330 351 [mm9:11:101350730-101350751:-] 0.4700 160 7 -14.93 -0.1307 MIMAT0004622 mmu-let-7c-1* 12189 Brca1 ccuuucgaucuuccaACAUGUc |||||| ugaauauuucaugucUGUACAa 2 8 702 723 [mm9:11:101350358-101350379:-] 0.6868 120 6 -6.10 -0.1271 MIMAT0005439 mmu-let-7c-2* 12189 Brca1 ccuuUCUGUCAUCUAACAUAUc | :: ||: :||||||| gggcAUGUCGUGAGUUGUAUAu 2 19 330 351 [mm9:11:101350730-101350751:-] 0.4700 150 7 -10.65 -0.1333 MIMAT0004623 mmu-let-7f* 12189 Brca1 ccCUUCCGUUAUCUAACAUAUc | | |: :|: :||||||| ggGCAUGUCGUGAGUUGUAUAu 2 21 330 351 [mm9:11:101350730-101350751:-] 0.4700 152 7 -11.29 -0.1320 MIMAT0004625 mmu-miR-16* 12189 Brca1 aguCGUCGUGUCAGUUAUGACc || |::| ||:||||||| aauGCUGUGCUGUUAAUACUGc 2 20 961 982 [mm9:11:101350099-101350120:-] 0.6868 167 7 -17.03 -1.1759 MIMAT0004628 mmu-miR-21* 12189 Brca1 cugucggguagcugACGACAAc ||||||| guuuauaaaugcugUGCUGUUa 2 9 954 975 [mm9:11:101350106-101350127:-] 0.6868 140 7 -11.12 -1.1438 MIMAT0004629 mmu-miR-22* 12189 Brca1 auuuCGAACGGUGACUUCUUGa |: | : |||||||||| aguuGUAUAUGACUGAAGAACa 2 19 342 363 [mm9:11:101350718-101350739:-] 0.4686 158 7 -15.94 -0.8268 MIMAT0004630 mmu-miR-26b* 12189 Brca1 cuCGG-UUCAUUACCUCUUGUcc ||: ||| || ||||||| uuGCUGAAGGAA--GAGAACAua 3 21 824 844 [mm9:11:101350237-101350257:-] 0.6868 136 0 -11.28 -0.1830 MIMAT0004630 mmu-miR-26b* 12189 Brca1 cucgGUUCAUUACCUCUUGUCc ||: | : ||||||||| cguaCAGAUUG-GGAGAACAGc 2 19 1362 1382 [mm9:11:101357845-101357865:-] 0.5354 152 7 -17.51 -0.1364 MIMAT0004630 mmu-miR-26b* 12189 Brca1 cucGGUUCAUUACCUCUUGUCc |||: | : ||||||| guuCCAGAU-GCCAAGAACAGc 2 20 960 980 [mm9:11:101358247-101358267:-] 0.5694 141 7 -13.70 -0.1343 MIMAT0004631 mmu-miR-29a* 12189 Brca1 gacuugugguuuucUUUAGUCa ||||||| ugugguuugacuuaAAAUCAGu 2 9 452 473 [mm9:11:101350608-101350629:-] 0.5331 140 7 -9.59 -0.4392 MIMAT0000549 mmu-miR-322* 12189 Brca1 cacaacgucgcgaaGUACAAa |||||| uccuuauaaaauugCAUGUUc 2 8 387 407 [mm9:11:101350674-101350694:-] 0.5326 120 6 -6.62 -0.1116 MIMAT0004647 mmu-miR-338-5p 12189 Brca1 gugaGUCGUGGUCCUAUA-ACAa || |||:: ||||| ||| uuuaCAACACUGUGAUAUGUGUg 2 19 372 394 [mm9:11:101358833-101358855:-] 0.4989 130 0 -13.03 -0.2731 MIMAT0000595 mmu-miR-345-5p 12189 Brca1 uucGUGACCUGAUCCCCA-GUCg ||:| |:||: |||| ||| gaaCAUUAGGCUGAGGGUGCAGu 2 20 179 201 [mm9:11:101359026-101359048:-] 0.5956 131 0 -22.50 -0.3437 MIMAT0000650 mmu-miR-17* 12189 Brca1 gauguucACGGGAGUGACGUca ||:: :|||||| gcugugcUGUUAAUACUGCAaa 3 16 964 985 [mm9:11:101350096-101350117:-] 0.6868 127 0 -16.13 -0.3033 MIMAT0004665 mmu-miR-218-1* 12189 Brca1 ccacgaacugccuugGUACAAa |||||| uuccuuauaaaauugCAUGUUc 2 8 386 407 [mm9:11:101350674-101350695:-] 0.5326 120 6 -5.87 -0.1105 MIMAT0004668 mmu-miR-138* 12189 Brca1 gggaccacaaCACUUCAUCGGc || ||||||| aaggcuccagGUUUAGUAGCCa 2 13 481 502 [mm9:11:101350579-101350600:-] 0.4694 144 7 -15.09 -0.4968 MIMAT0004670 mmu-miR-7a* 12189 Brca1 auACCGUCUGACACUAAACAAc | |::| | ||||||||| gcUAGUGGUC-CUGAUUUGUUc 2 21 368 388 [mm9:11:101350693-101350713:-] 0.4911 154 7 -11.81 -0.1555 MIMAT0004691 mmu-miR-382* 12189 Brca1 uuuUUCACAACAGGCACUUACu | || || :||||||| auuAUGUAUUUGAUGUGAAUGu 2 20 561 582 [mm9:11:101350499-101350520:-] 0.4559 151 7 -12.29 -0.4738 MIMAT0004746 mmu-miR-409-5p 12189 Brca1 uacguuucaacgagccCAUUGGa |||||| guuguagcagcucuaaGUAACCc 2 8 650 672 [mm9:11:101350409-101350431:-] 0.6344 120 6 -14.70 -0.1292 MIMAT0001637 mmu-miR-452 12189 Brca1 cagaGUCAAAGGAGACGUUUGu | ||| : |||||||: ugugCUGUUAAUACUGCAAAUa 2 19 966 987 [mm9:11:101350094-101350115:-] 0.6868 138 0 -13.53 -0.2107 MIMAT0001637 mmu-miR-452 12189 Brca1 cagagucaaaggagaCGUUUGu |||||| caaauaaacuaaauaGCAAACa 2 8 982 1003 [mm9:11:101350078-101350099:-] 0.6868 120 6 -8.69 -0.7305 MIMAT0002106 mmu-miR-465a-5p 12189 Brca1 aguguagucacgguaaGAUUUAu |||||| uaauacugcaaauaaaCUAAAUa 2 8 974 996 [mm9:11:101350085-101350107:-] 0.6868 120 6 -8.77 -0.1887 MIMAT0002106 mmu-miR-465a-5p 12189 Brca1 agUGUA-GUCACGGUAAGAUUUAu || | || | | | ||||||| acACCUGCACUCCAAGUCUAAAUu 2 22 489 512 [mm9:11:101358715-101358738:-] 0.5032 156 7 -13.93 -0.1834 MIMAT0004759 mmu-miR-466a-5p 12189 Brca1 auaCAUGUAC--AUGU--GUGU-GUAu |||| || ||:| |||| ||| gugGUACUUGCCUAUAAUCACAGCAUu 2 20 289 315 [mm9:11:101350766-101350792:-] 0.4685 121 0 -11.01 -0.1648 MIMAT0002107 mmu-miR-466a-3p 12189 Brca1 agAAUACACACGCACAUACAUAu || | | | ||||||| aaUUCAGAGCCAGAUUAUGUAUu 2 22 548 570 [mm9:11:101350511-101350533:-] 0.4559 141 7 -5.58 -0.6343 MIMAT0003409 mmu-miR-467a 12189 Brca1 gcguAUAUGUA-CGUCCGUGAAu | ||| | |:|||||||| agucUUUACCUGGUAGGCACUUg 2 19 47 69 [mm9:11:101359158-101359180:-] 0.5236 161 7 -19.45 -0.3077 MIMAT0003127 mmu-miR-484 12189 Brca1 uaGCC--CUCCCCUGACUCGGACu ||| || |||: ||||||| agCGGUAGAAGGGGGAGAGCCUGu 2 21 465 488 [mm9:11:101358739-101358762:-] 0.5121 159 7 -31.59 -0.1709 MIMAT0003166 mmu-miR-546 12189 Brca1 cuGAGGCACGGUGGUa ||:: | |||||| agCUUUAUCCCACCAa 2 15 196 211 [mm9:11:101350870-101350885:-] 0.6123 122 6 -11.91 -0.1237 MIMAT0004786 mmu-miR-540-5p 12189 Brca1 ugucucagucucccaCUGGGAAc ||||||| uuguuucuaugagccGACCCUUu 2 9 1005 1027 [mm9:11:101358200-101358222:-] 0.5721 140 7 -13.33 -0.2426 MIMAT0004788 mmu-miR-20b* 12189 Brca1 gaucuucACGAGUGUGACGUca ||:| |:|||||| gcugugcUGUUAAUACUGCAaa 3 16 964 985 [mm9:11:101350096-101350117:-] 0.6868 139 0 -16.28 -0.3008 MIMAT0004790 mmu-miR-503* 12189 Brca1 ggUCCGUCACCUUUGUUAUGAg | || ||| : :|||||| aaAUGCUGUGCUGUUAAUACUg 2 21 960 981 [mm9:11:101350100-101350121:-] 0.6868 140 6 -11.06 -0.1053 MIMAT0003376 mmu-miR-302c 12189 Brca1 ggUGACUUUGUACCUUC-GUGAa | || |: || |||| |||| gcAGUGUAGGAU-GAAGCCACUu 2 21 1446 1467 [mm9:11:101357760-101357781:-] 0.5057 122 0 -15.86 -0.1665 MIMAT0015219 mmu-miR-3475 12189 Brca1 aaguuuGGUACACGGAG-GUCu |||| | |||| ||| ggaacuCCAUCUUCCUCGCAGg 2 16 643 664 [mm9:11:101358563-101358584:-] 0.5676 123 0 -16.59 -0.1291 MIMAT0014816 mmu-miR-3099 12189 Brca1 agGGGUUGGAGAGAGA-UCGGAu |||| ||||||||| ||||| agCCCAUCCUCUCUCUGAGCCUa 2 21 927 949 [mm9:11:101358278-101358300:-] 0.5694 156 0 -36.47 -0.1915 MIMAT0014816 mmu-miR-3099 12189 Brca1 agGGGUU-GGAGAGAGA-UCGGAu |:::| |:||||||| ||||| ccCUUGAUCUUCUCUCUCAGCCUc 2 21 1496 1519 [mm9:11:101357708-101357731:-] 0.5631 139 0 -28.62 -0.3254 MIMAT0003896 mmu-miR-763 12189 Brca1 cggugaCCAAGAAG--GGUCGACc || ||| | ||||||| gccuaaGGCUCUGCAGCCAGCUGc 2 17 11 34 [mm9:11:101359193-101359216:-] 0.5236 151 7 -21.11 -0.3613 MIMAT0003896 mmu-miR-763 12189 Brca1 cgGUGACCAAGAAGGGU-CGACc ::|| | | |||||| |||| agUGCUUG-UGUUCCCAGGCUGc 2 21 734 755 [mm9:11:101358472-101358493:-] 0.5712 126 0 -17.76 -0.4042 MIMAT0003896 mmu-miR-763 12189 Brca1 cgGUGACCAAGAAGGGUCG-ACc |: || |:| |||||| || cuCGAUGACUUUCCCCAGCGUGu 2 21 601 623 [mm9:11:101358604-101358626:-] 0.5798 124 0 -16.33 -0.2673 MIMAT0003737 mmu-miR-666-5p 12189 Brca1 ccgagAGUGUCGACACGGGCGa | || | | ||||||| aacaaUAACUGAUUUGCCCGCu 2 18 1407 1428 [mm9:11:101357799-101357820:-] 0.5143 153 7 -19.40 -0.4630 MIMAT0004823 mmu-miR-666-3p 12189 Brca1 ucGUCCGCUAGUGCGACGUCGg ||| | | :| ||||||| ccCAGCCUAAGGCUCUGCAGCc 2 21 7 28 [mm9:11:101359199-101359220:-] 0.5236 156 7 -19.88 -0.2036 MIMAT0003897 mmu-miR-759 12189 Brca1 caguuuuaacaaacgUGAGACg |||||| ucuuuaaauacacggACUCUGa 2 8 678 699 [mm9:11:101350382-101350403:-] 0.6606 120 6 -10.27 -0.2005 MIMAT0003739 mmu-miR-673-5p 12189 Brca1 gagguuccUGGUCUCGACACuc |: | |||||| guauguuuAUAAAUGCUGUGcu 3 15 950 971 [mm9:11:101350110-101350131:-] 0.6868 122 0 -8.63 -0.1712 MIMAT0003898 mmu-miR-760 12189 Brca1 aggggugUCUGGGUCUCGGc | |::||||||| acugaggAAAUUCAGAGCCa 2 14 540 559 [mm9:11:101350522-101350541:-] 0.4440 149 7 -17.48 -0.8058 MIMAT0003451 mmu-miR-677 12189 Brca1 agucuucGAUUAGUAGUG-ACUu |||| |||||| ||| cuuuucuCUAAGCAUCACAUGAg 2 16 302 324 [mm9:11:101358903-101358925:-] 0.5162 131 0 -16.15 -0.2925 MIMAT0003457 mmu-miR-680 12189 Brca1 ggGGGUACAGUCGUCUACGGg :|| |||: |||||||| gaUCCCUGUU-CCAGAUGCCa 2 20 953 972 [mm9:11:101358255-101358274:-] 0.5694 157 7 -25.35 -0.4065 MIMAT0003459 mmu-miR-682 12189 Brca1 gucUGAAGUGACA---CUGACGUc :|| ::|||| |||||| aauGCUGUGCUGUUAAUACUGCAa 2 19 961 984 [mm9:11:101350097-101350120:-] 0.6868 121 6 -14.49 -0.2887 MIMAT0003461 mmu-miR-683 12189 Brca1 cucCUGUGUCGAAUGUCGUCc ||: :| ||||||| acaGAUUGGGAGAACAGCAGa 2 19 1365 1385 [mm9:11:101357842-101357862:-] 0.5354 142 7 -13.28 -0.5109 MIMAT0003471 mmu-miR-692 12189 Brca1 cucacuccgcgagUUUCUCUa ||||||| cagcauuugguggAAAGAGAu 2 9 309 329 [mm9:11:101350752-101350772:-] 0.4699 140 7 -13.47 -0.1101 MIMAT0003471 mmu-miR-692 12189 Brca1 cucacuccgcgagUUUCUCUa :|||||| uugcuugcugaagGAAGAGAa 2 9 820 840 [mm9:11:101350241-101350261:-] 0.6868 124 6 -10.28 -0.1526 MIMAT0003471 mmu-miR-692 12189 Brca1 cuCACUCCGCGAG---UUUCUCUa ||| | | | : ||||||| uuGUGUGCCCCAUAAGAAAGAGAa 2 20 158 181 [mm9:11:101359046-101359069:-] 0.5956 142 7 -9.03 -0.5475 MIMAT0003474 mmu-miR-694 12189 Brca1 gaaguccGUUGUAAAAGUc ||::||||||| gucacuaCAGUAUUUUCAc 2 13 1165 1183 [mm9:11:101358044-101358062:-] 0.6034 152 7 -11.26 -0.5983 MIMAT0004827 mmu-miR-297b-3p 12189 Brca1 auacccauacacacAUACAUAu ||||||| auucagagccagauUAUGUAUu 2 9 549 570 [mm9:11:101350511-101350532:-] 0.4559 140 7 -4.89 -0.6343 MIMAT0003742 mmu-miR-455 12189 Brca1 cacauaUACGGGCACCUGACg || :| ||||||| gaacucAUAAUCUUGGACUGu 2 16 853 873 [mm9:11:101350208-101350228:-] 0.6868 147 7 -14.07 -1.1888 MIMAT0003493 mmu-miR-703 12189 Brca1 aagaAAGGAAGACUUCCAAAa | ||| | ||||||| ugggUGCCU--UAAAGGUUUu 2 18 121 139 [mm9:11:101350942-101350960:-] 0.6123 146 7 -13.68 -0.7106 MIMAT0003502 mmu-miR-712 12189 Brca1 ccAUGGCGGGCCCACUUCCUc | ::||:: | ||||||| aaUUUUGCUU-GCUGAAGGAa 2 20 816 835 [mm9:11:101350246-101350265:-] 0.6868 149 7 -16.24 -1.0253 MIMAT0003504 mmu-miR-713 12189 Brca1 cgacacacggaAGUCACGu ||||||| uugacuuaaaaUCAGUGCu 2 9 458 476 [mm9:11:101350605-101350623:-] 0.5012 140 7 -10.72 -0.5280 MIMAT0003504 mmu-miR-713 12189 Brca1 cgACACAC--GGAAG-UCACGu |||| | ::||| ||||| aaUGUGAGGUUUUUCAAGUGCc 2 18 578 599 [mm9:11:101350482-101350503:-] 0.5239 120 0 -14.34 -0.3299 MIMAT0003506 mmu-miR-715 12189 Brca1 gugcgcccccacacGUGCCUc |||||| uucuucuuuaaauaCACGGAc 2 8 674 694 [mm9:11:101350387-101350407:-] 0.6606 120 6 -12.24 -0.1676 MIMAT0003511 mmu-miR-450b-5p 12189 Brca1 auaaguccuugUAUGACGUUUu |||||||||| cugugcuguuaAUACUGCAAAu 2 12 965 986 [mm9:11:101350095-101350116:-] 0.6868 155 7 -12.42 -1.2705 MIMAT0003512 mmu-miR-450b-3p 12189 Brca1 uaCGUACGU-UUUACAAGGGUUa ||| | | ||:| ||||||| ucGCAGGAAGAAGUCUUCCCAAg 2 21 658 680 [mm9:11:101358547-101358569:-] 0.5694 163 7 -15.46 -0.1075 MIMAT0003781 mmu-miR-676* 12189 Brca1 cgUUCAGGAUUCCAACAUCUCa || | ||| |||||||| agAAAU-CUA--UUUGUAGAGg 2 21 1186 1204 [mm9:11:101358023-101358041:-] 0.6034 147 7 -13.44 -0.5441 MIMAT0004210 mmu-miR-804 12189 Brca1 agguccacuccuugUUGAGUGu ||||||: acauauuuuucaugAACUCAUa 2 9 840 861 [mm9:11:101350220-101350241:-] 0.6868 124 0 -10.78 -0.1216 MIMAT0004237 mmu-miR-742 12189 Brca1 aaaugGGUCGUACCACCGAAAg | ||::| ||||||| auucaCAAGUGUCUUGGCUUUa 2 18 510 531 [mm9:11:101358696-101358717:-] 0.5210 153 7 -12.66 -0.7124 MIMAT0004839 mmu-miR-743b-5p 12189 Brca1 acuACCUGUGGUCAG-ACUUGu | || ::| ||| ||||| ccuUUGAAGUCUGUCUUGAACa 2 19 153 174 [mm9:11:101350907-101350928:-] 0.6123 122 0 -13.45 -1.0251 MIMAT0004843 mmu-miR-879* 12189 Brca1 ggCUUUCGAAC-UUC--GGUAUUCg ||: |||| : | ||||||| ugGAGUACUUGUGUGCCCCAUAAGa 2 21 150 174 [mm9:11:101359053-101359077:-] 0.5876 146 7 -16.15 -0.4022 MIMAT0004844 mmu-miR-880 12189 Brca1 agaUGAGUCUCUCC---UACCUCAu :| || : ||| ||||||| cuaGCCCAAGAAGGCAAAUGGAGUa 2 20 132 156 [mm9:11:101359071-101359095:-] 0.5797 146 7 -17.40 -0.6414 MIMAT0004845 mmu-miR-881* 12189 Brca1 ucuacacuGAC-AAUAGAGAGAc :|| | ||||||| uuagccccUUGAUCUUCUCUCUc 2 15 1491 1513 [mm9:11:101357714-101357736:-] 0.5631 141 7 -10.28 -0.3170 MIMAT0004848 mmu-miR-883a-5p 12189 Brca1 cauuGACGAUGA-AGAGAGUCGu :|| | :| ||||||||| ccccUUGAUCUUCUCUCUCAGCc 2 19 1495 1517 [mm9:11:101357710-101357732:-] 0.5631 157 7 -17.05 -0.2316 MIMAT0004851 mmu-miR-883b-3p 12189 Brca1 uaUGA-CUCUCUACAACGUCAAu |:| |: || | ||||||| acAUUAGGCUGAGGGUGCAGUUg 2 21 181 203 [mm9:11:101359024-101359046:-] 0.5956 151 7 -21.70 -0.1109 MIMAT0004856 mmu-miR-105 12189 Brca1 ugGUGUUC--GUAGACUCGUG-AACc ||: || | | | ||||| ||| agCAUUAGGUCCUGUCAGCACGUUGg 2 22 1322 1347 [mm9:11:101357880-101357905:-] 0.5479 120 0 -18.53 -0.1326 MIMAT0004864 mmu-miR-297a* 12189 Brca1 auacccauacacacAUACAUAu ||||||| auucagagccagauUAUGUAUu 2 9 549 570 [mm9:11:101350511-101350532:-] 0.4559 140 7 -4.89 -0.6343 MIMAT0004866 mmu-miR-297c* 12189 Brca1 auacccauacacacAUACAUAu ||||||| auucagagccagauUAUGUAUu 2 9 549 570 [mm9:11:101350511-101350532:-] 0.4559 140 7 -4.89 -0.6343 MIMAT0004867 mmu-miR-327 12189 Brca1 uaggAGU-ACGGGGAGUUCa ||| |||:||||||| aaaaUCAGUGCUCCUCAAGg 2 16 465 484 [mm9:11:101350597-101350616:-] 0.5012 162 7 -23.14 -0.2085 MIMAT0004867 mmu-miR-327 12189 Brca1 uaGGAGUACGGGGAGUUCa :| | | :|||||||| ggUCCCUUCUCCCUCAAGa 2 18 1063 1081 [mm9:11:101358146-101358164:-] 0.5748 153 7 -21.18 -0.4510 MIMAT0004871 mmu-miR-465b-5p 12189 Brca1 gucuagucgugguaaGAUUUAu |||||| aauacugcaaauaaaCUAAAUa 2 8 975 996 [mm9:11:101350085-101350106:-] 0.6868 120 6 -9.23 -0.1817 MIMAT0004871 mmu-miR-465b-5p 12189 Brca1 gucUAGUCGUGG---UAAGAUUUAu | | ||||: | ||||||| uacACCUGCACUCCAAGUCUAAAUu 2 20 488 512 [mm9:11:101358715-101358739:-] 0.5032 150 7 -11.85 -0.1851 MIMAT0004873 mmu-miR-465c-5p 12189 Brca1 gucuagucgcgguaaGAUUUAu |||||| aauacugcaaauaaaCUAAAUa 2 8 975 996 [mm9:11:101350085-101350106:-] 0.6868 120 6 -7.61 -0.1851 MIMAT0004873 mmu-miR-465c-5p 12189 Brca1 gucuaGUCGCGGUAAGAUUUAu || : | | ||||||| accugCACUCCAAGUCUAAAUu 2 18 491 512 [mm9:11:101358715-101358736:-] 0.5032 149 7 -11.28 -0.1868 MIMAT0004875 mmu-miR-466b-5p 12189 Brca1 guaCAUGUAC--AUGU--GUGU-GUAg |||| || ||:| |||| ||| gugGUACUUGCCUAUAAUCACAGCAUu 2 20 289 315 [mm9:11:101350766-101350792:-] 0.4685 121 0 -11.45 -0.1648 MIMAT0004876 mmu-miR-466b-3p 12189 Brca1 agAAUACACACGCACAUACAUAu || | | | ||||||| aaUUCAGAGCCAGAUUAUGUAUu 2 22 548 570 [mm9:11:101350511-101350533:-] 0.4559 141 7 -5.58 -0.6343 MIMAT0005453 mmu-miR-466b-3-3p 12189 Brca1 agAAUACACACGCACAUACAUAa || | | | ||||||| aaUUCAGAGCCAGAUUAUGUAUu 2 22 548 570 [mm9:11:101350511-101350533:-] 0.4559 141 7 -6.31 -0.6343 MIMAT0004877 mmu-miR-466c-5p 12189 Brca1 auaCAUGUACG--UGU--GUGU-GUAg |||| ||| |:| |||| ||| gugGUACUUGCCUAUAAUCACAGCAUu 2 20 289 315 [mm9:11:101350766-101350792:-] 0.4685 121 0 -13.99 -0.1664 MIMAT0004878 mmu-miR-466c-3p 12189 Brca1 agAAUACACACGCACAUACAUAu || | | | ||||||| aaUUCAGAGCCAGAUUAUGUAUu 2 22 548 570 [mm9:11:101350511-101350533:-] 0.4559 141 7 -5.58 -0.6343 MIMAT0004879 mmu-miR-466e-5p 12189 Brca1 auaCAUGUAC--AUGU--GUGU-GUAg |||| || ||:| |||| ||| gugGUACUUGCCUAUAAUCACAGCAUu 2 20 289 315 [mm9:11:101350766-101350792:-] 0.4685 121 0 -11.45 -0.1648 MIMAT0004880 mmu-miR-466e-3p 12189 Brca1 agAAUACACACGCACAUACAUAu || | | | ||||||| aaUUCAGAGCCAGAUUAUGUAUu 2 22 548 570 [mm9:11:101350511-101350533:-] 0.4559 141 7 -5.58 -0.6343 MIMAT0004883 mmu-miR-466g 12189 Brca1 acacacacguacACAGACAUa |||||||| augaauauuucaUGUCUGUAc 2 10 701 721 [mm9:11:101350360-101350380:-] 0.6868 145 7 -10.27 -0.9362 MIMAT0004890 mmu-miR-509-5p 12189 Brca1 uacuaacGGUGUAAGACCUCAu :|| | ||||||| ucacaaaUCA-AGCCUGGAGUu 2 16 891 911 [mm9:11:101358316-101358336:-] 0.5694 141 7 -13.95 -0.1018 MIMAT0004894 mmu-miR-574-3p 12189 Brca1 acACCCACACACGUACUCG-CAc || ||| || |||||| || caUGAGUG-CUGGAUGAGCAGUg 2 21 319 340 [mm9:11:101358887-101358908:-] 0.5083 126 0 -20.35 -0.1320 MIMAT0004931 mmu-miR-466d-3p 12189 Brca1 gauacacacgcacAUACAUAu ||||||| uucagagccagauUAUGUAUu 2 9 550 570 [mm9:11:101350511-101350531:-] 0.4559 140 7 -5.58 -0.6343 MIMAT0004934 mmu-miR-872 12189 Brca1 ggacUUGAUUGUUCAUUGGaa |:|| :|||||||| uagcAGCU-CUAAGUAACCca 3 18 654 673 [mm9:11:101350408-101350427:-] 0.6344 135 0 -13.39 -0.1730 MIMAT0004938 mmu-miR-875-3p 12189 Brca1 guaucggaGUCAU-AAAAGUcc || || |||||| gaagagaaCA-UAUUUUUCAug 3 14 833 853 [mm9:11:101350228-101350248:-] 0.6868 122 0 -6.65 -0.1312 MIMAT0005835 mmu-miR-1-2-as 12189 Brca1 acCUUACAUUUCUUCAUACAu || | || | |||||||| cuGAUUAUAUA-AAGUAUGUu 2 20 937 956 [mm9:11:101350125-101350144:-] 0.6868 157 7 -8.61 -1.2359 MIMAT0005837 mmu-miR-1187 12189 Brca1 aaUGUGUGUAUGUGUGUGU-GUAu || ::| ||:| |||| ||| guACUUGCCUAUAAUCACAGCAUu 2 22 292 315 [mm9:11:101350766-101350789:-] 0.4685 125 0 -11.04 -0.1633 MIMAT0005839 mmu-miR-669f 12189 Brca1 uaUGCACA-CACACAUACAUAUAc :| ||| ||| || ||||||| ggGCAUGUCGUGAGU-UGUAUAUg 2 22 330 352 [mm9:11:101350729-101350751:-] 0.4700 162 7 -16.93 -0.1760 MIMAT0005846 mmu-miR-467f 12189 Brca1 acAUCC--ACA-CACAC-ACAUAUa |:|| ||| ||| | |||||| gaUGGGCAUGUCGUGAGUUGUAUAu 2 20 327 351 [mm9:11:101350730-101350754:-] 0.4700 125 6 -14.99 -0.1337 MIMAT0005852 mmu-miR-1194 12189 Brca1 uccUAGAUCGUCAAUGAGUAag ||:| || |||||| cauAUUUUUCAUGAACUCAUaa 3 20 841 862 [mm9:11:101350219-101350240:-] 0.6868 131 0 -7.23 -0.1270 MIMAT0005854 mmu-miR-467g 12189 Brca1 uauauacacacacAUACAUAu ||||||| uucagagccagauUAUGUAUu 2 9 550 570 [mm9:11:101350511-101350531:-] 0.4559 140 7 -4.89 -0.6380 MIMAT0005856 mmu-miR-1195 12189 Brca1 acUCGUCCGACCGGAGCUUGAGu | || :| :| :|||||| agAACAUAUUUUUCAUGAACUCa 2 22 837 859 [mm9:11:101350222-101350244:-] 0.6868 133 6 -14.41 -0.2389 MIMAT0007863 mmu-miR-1902 12189 Brca1 uucaGUACGG--AUGACGUGGAGa |||||| : ||||||| cuucCAUGCCCGGGGAGCACCUCu 2 19 14 37 [mm9:11:101351044-101351067:-] 0.6123 149 7 -23.23 -0.6489 MIMAT0007873 mmu-miR-1896 12189 Brca1 gaggagugggUGGUAGUCUCUc ||| ||||||| cagagcuuggACC-UCAGAGAu 2 13 248 268 [mm9:11:101358959-101358979:-] 0.5956 146 7 -14.53 -0.1136 MIMAT0007878 mmu-miR-1894-3p 12189 Brca1 gaGGGAAGUGGGAG-AG-GGAACg |||| | :|| | || ||||| caCCCUGCUUCCACUUCUCCUUGu 2 21 985 1008 [mm9:11:101358219-101358242:-] 0.5694 127 0 -23.97 -0.5572 MIMAT0009390 mmu-miR-1927 12189 Brca1 agucagggaUUGUAGGUCUCCAg |||| ||||||| gauugggagAACA-GCAGAGGUu 2 15 1368 1389 [mm9:11:101357838-101357859:-] 0.5354 148 7 -16.85 -0.1160 MIMAT0009397 mmu-miR-1933-3p 12189 Brca1 uaucagUGU-GACUACCAGGACc |:| || :|||||||| gaacaaAUAGCUAGUGGUCCUGa 2 17 359 381 [mm9:11:101350700-101350722:-] 0.4799 155 7 -19.73 -1.0194 MIMAT0009397 mmu-miR-1933-3p 12189 Brca1 uauCAGUGU---GACU----A-CCAGGACc |||:|| |||| | ||||||| cuuGUCGCAUUUCUGAGCAUUAGGUCCUGu 2 20 1307 1336 [mm9:11:101357891-101357920:-] 0.5479 144 7 -23.08 -0.4356 MIMAT0009400 mmu-miR-1936 12189 Brca1 cgGUCAAGUGUCGUCCA-GUCAAu || | :| | :||| ||||| aaCAUUAGGCUGAGGGUGCAGUUg 2 22 180 203 [mm9:11:101359024-101359047:-] 0.5956 121 0 -15.20 -0.2230 MIMAT0009402 mmu-miR-1938 12189 Brca1 cuggcUUGAUGUUCAGGGUGGc |:|| :| ||||||| gagaaAGCUUUA--UCCCACCa 2 18 191 210 [mm9:11:101350871-101350890:-] 0.6123 146 7 -15.32 -1.0794 MIMAT0009409 mmu-miR-1944 12189 Brca1 uuAGUCUUGA---ACU-GU-A-AGUCGUGUCUc | || :|| ||| || | | ||||||| caUGAGUGCUGGAUGAGCAGUGUGUGCACAGAa 2 26 319 351 [mm9:11:101358876-101358908:-] 0.4993 145 7 -15.82 -0.6503 MIMAT0009424 mmu-miR-1953 12189 Brca1 guCUUCGGACUCUUGAAAGGGu || |: || :|||||||| agGACACUCGAUGACUUUCCCc 2 21 595 616 [mm9:11:101358611-101358632:-] 0.5798 160 7 -17.75 -0.2835 MIMAT0009425 mmu-miR-1954 12189 Brca1 uuGUCCCAGAGUGAGACGUCa ||| | :|||||||| ccCAGCCUAAGGCUCUGCAGc 2 20 7 27 [mm9:11:101359200-101359220:-] 0.5236 151 7 -17.86 -0.1236 MIMAT0009427 mmu-miR-669n 12189 Brca1 uguguGUAG-GUGUGUGUUUa ::|| :: ||||||| aagucUGUCUUGAACACAAAa 2 16 159 179 [mm9:11:101350902-101350922:-] 0.6123 142 7 -9.51 -1.0814 MIMAT0009427 mmu-miR-669n 12189 Brca1 uguguguagguguGUGUUUa |||||| acuacaguauuuuCACAAAg 2 8 1168 1187 [mm9:11:101358040-101358059:-] 0.6034 120 6 -9.86 -0.1015 MIMAT0009431 mmu-miR-1958 12189 Brca1 ugaauGACGAAGGUGAA-AGGAu |||||||||||| |||| ucaccCUGCUUCCACUUCUCCUu 2 18 984 1006 [mm9:11:101358221-101358243:-] 0.5694 149 0 -26.88 -0.2388 MIMAT0009433 mmu-miR-1960 12189 Brca1 ucGGGAG-AAG-AUUGUCGUGACc |:| | ||| ||:||||||| cuCUCACAUUCAAAAUAGCACUGa 2 21 1095 1118 [mm9:11:101358109-101358132:-] 0.5748 158 7 -19.38 -1.0595 MIMAT0009435 mmu-miR-1962 12189 Brca1 uacacAGGGUCACGGUCGGAGa ||:| | :||||||| gaucuUCUC--UCUCAGCCUCu 2 18 1501 1520 [mm9:11:101357707-101357726:-] 0.5631 146 7 -19.01 -0.4497 MIMAT0009439 mmu-miR-1966 12189 Brca1 cuGAGAGAGGACUCGGUCGAGGGAa :|||: ||| :: ||||||| auUUCUUCCCU---UUUGCUCCCUg 2 24 768 789 [mm9:11:101350292-101350313:-] 0.6868 151 7 -20.50 -1.0028 MIMAT0009441 mmu-miR-1968 12189 Brca1 ucaggugguAGGAAUU-GUCGACGu ||: |: ||||||| gccuaaggcUCUGCAGCCAGCUGCu 2 16 11 35 [mm9:11:101359192-101359216:-] 0.5236 142 7 -16.99 -0.4714 MIMAT0009445 mmu-miR-1274a 12189 Brca1 acCGCGGACUUGUCCCUG-GACu | |::|| :|| |||| ||| uaGGGUUUGUGCA-GGACACUGa 2 21 523 544 [mm9:11:101350537-101350558:-] 0.4567 122 0 -23.38 -0.2364 MIMAT0009456 mmu-miR-1839-5p 12189 Brca1 guUCUGGACAAGAUAGAUGGAa | ||| | || ||||||| aaAAACCAG--CU-UCUACCUa 2 21 94 112 [mm9:11:101350969-101350987:-] 0.6123 147 7 -13.35 -0.8983 MIMAT0009457 mmu-miR-1839-3p 12189 Brca1 cgACAACCAUCUAUUCAUCCAGa | |||| |: :|||||||| gaUAUUGG--GGGGAGUAGGUCu 2 22 879 899 [mm9:11:101350182-101350202:-] 0.6868 158 7 -21.90 -0.4591 MIMAT0009458 mmu-miR-1981 12189 Brca1 cggUGCAGAUUCGGGUCGGAA-AUg ::||| ||| |||||| || ccaGUGUC-AAGGAGAGCCUUCUAa 2 22 598 621 [mm9:11:101350460-101350483:-] 0.5799 123 0 -17.84 -0.7265 MIMAT0011210 mmu-miR-2134 12189 Brca1 cguggggCA-AAGGGUUCUg || ||||||||| ggaagaaGUCUUCCCAAGAu 2 13 663 682 [mm9:11:101358545-101358564:-] 0.5694 151 7 -15.50 -0.1423 MIMAT0011210 mmu-miR-2134 12189 Brca1 cgUGGGGCAAAGGGUUCUg ::::| | ||||||| uuGUUUCCUAGCCCAAGAa 2 18 125 143 [mm9:11:101359084-101359102:-] 0.5512 145 7 -16.30 -0.4225 MIMAT0011212 mmu-miR-2136 12189 Brca1 guguagaGUCAGUUGUGGGUc || ||||||||| ccagcacCAAACAACACCCAg 2 15 500 520 [mm9:11:101350561-101350581:-] 0.4694 154 7 -22.65 -0.4887 MIMAT0011216 mmu-miR-2140 12189 Brca1 uggugguucuaGACGUGGa ||||||| uuuuguguuucCUGCACCa 2 9 277 295 [mm9:11:101358932-101358950:-] 0.5240 140 7 -11.84 -0.2692 MIMAT0011221 mmu-miR-2145 12189 Brca1 uugGUC--CGGGCUGGGACGa ||| |::| ||||||| gaaCAGCUGUUC-ACCCUGCu 2 17 974 993 [mm9:11:101358234-101358253:-] 0.5694 145 7 -21.67 -0.2232 MIMAT0012771 mmu-miR-432 12189 Brca1 gaCGGGUGACUAGA--UGAGGUUCu |||::: | || |||||||| gaGCCUGUACACCUGCACUCCAAGu 2 22 481 505 [mm9:11:101358722-101358746:-] 0.5032 156 7 -21.29 -0.2509 MIMAT0012773 mmu-miR-767 12189 Brca1 acgagucUGUUG-GUACCACGu |:|:| ||||||| gcguguuAUAGCAGAUGGUGCa 2 15 618 639 [mm9:11:101358588-101358609:-] 0.5737 145 7 -18.26 -0.2061 MIMAT0012774 mmu-miR-664 12189 Brca1 auccgaccccucauuUACUUAu |||||| uacacggacucugauAUGAAUa 2 8 686 707 [mm9:11:101350374-101350395:-] 0.6606 120 6 -7.42 -0.1277 MIMAT0014852 mmu-miR-3072* 12189 Brca1 ggacgggagggagcCCCAGGGa ||||||| gcacaauuagcaguGGGUCCCu 2 9 1048 1069 [mm9:11:101358158-101358179:-] 0.5748 140 7 -20.02 -0.3798 MIMAT0015641 mmu-miR-3470b 12189 Brca1 ggUCGGACCAGAUGUCUC-ACu |||:||| | ||||| || agAGCUUGGACCUCAGAGAUGg 2 20 249 270 [mm9:11:101358957-101358978:-] 0.5956 131 0 -22.36 -0.1342 MIMAT0015646 mmu-miR-3474 12189 Brca1 cuuagGUGCAGAGGAGGGUCCc ::| | | :||||||| auaagUGCUUGUGUUCCCAGGc 2 18 731 752 [mm9:11:101358475-101358496:-] 0.5712 149 7 -18.50 -0.1583 MIMAT0000124 mmu-miR-15b 12189 Brca1 acAUUUGGUACUACACG-ACGAu ||||: || | ||| |||| caUAAAUAAU--UUUGCUUGCUg 2 21 809 829 [mm9:11:101350252-101350272:-] 0.6868 121 0 -9.03 -1.2426 MIMAT0000125 mmu-miR-23b 12189 Brca1 ccAUUAGGGACCGUUACACUa || |: || ||||||| ugUAUUUGAUGUGAAUGUGAg 2 20 565 585 [mm9:11:101350496-101350516:-] 0.4679 151 7 -9.85 -0.1784 MIMAT0000126 mmu-miR-27b 12189 Brca1 cgUCUUGAAUCG--GUGACACUu | |::|| | |||||||| ccACAGUUUUACAACACUGUGAu 2 20 365 387 [mm9:11:101358840-101358862:-] 0.4989 150 7 -19.07 -0.3441 MIMAT0000127 mmu-miR-29b 12189 Brca1 uugugacuaaaguuuACCACGAu ||||||| gcaccucucagucuuUGGUGCUu 2 9 30 52 [mm9:11:101351029-101351051:-] 0.6123 140 7 -16.78 -0.3635 MIMAT0000127 mmu-miR-29b 12189 Brca1 uugugacuaaAGUUUAC-CACGAu ||| ||| ||||| ucucuaagcaUCACAUGAGUGCUg 2 14 306 329 [mm9:11:101358898-101358921:-] 0.5162 121 0 -13.41 -0.1530 MIMAT0000128 mmu-miR-30a 12189 Brca1 gaaggucagcUCCUACAAAUGu || |||||||: gauuauauaaAGUAUGUUUAUa 2 13 939 960 [mm9:11:101350121-101350142:-] 0.6868 136 0 -9.21 -0.2172 MIMAT0000130 mmu-miR-30b 12189 Brca1 ucGACUCACA----UCCUACAAAUGu |||| | | || |||||||: acCUGAUUAUAUAAAGUAUGUUUAUa 2 21 935 960 [mm9:11:101350121-101350146:-] 0.6868 139 0 -11.49 -0.2113 MIMAT0000134 mmu-miR-124 12189 Brca1 ccguaagugGCGCACGGAAu :| ||||||| augugagggUGGGUGCCUUa 2 12 112 131 [mm9:11:101350950-101350969:-] 0.6123 143 7 -16.19 -0.3354 MIMAT0004528 mmu-miR-125a-3p 12189 Brca1 ccgaGGGUUCUU--GGAGUGGACa | ||| || ::||||||| ugaaCACAAAAAGUUUUCACCUGa 2 19 169 192 [mm9:11:101350889-101350912:-] 0.6123 153 7 -16.87 -1.1939 MIMAT0004528 mmu-miR-125a-3p 12189 Brca1 ccgAGGGUUCUUG-----GAGU-GGACa | |||||||| :||| |||| agaUGCCAAGAACAGCUGUUCACCCUGc 2 20 965 992 [mm9:11:101358235-101358262:-] 0.5694 122 0 -21.48 -0.4965 MIMAT0000140 mmu-miR-128 12189 Brca1 uuucucuggccaaGUGACACu ||||||| cacaguuuuacaaCACUGUGa 2 9 366 386 [mm9:11:101358841-101358861:-] 0.4989 140 7 -13.87 -1.0033 MIMAT0000144 mmu-miR-132 12189 Brca1 gcuGGUACCGACAUCUGACAAu :||| : |:||||||| aacUCAUAAUCUUGGACUGUUu 2 20 854 875 [mm9:11:101350206-101350227:-] 0.6868 151 7 -14.56 -1.0432 MIMAT0000148 mmu-miR-136 12189 Brca1 ggUAGUA-GUUUUGUUUACCUCa | :|| |||:: ||||||| ccAGUAUGCAAGGGCAAUGGAGa 2 21 913 935 [mm9:11:101350146-101350168:-] 0.6868 155 7 -18.25 -0.6114 MIMAT0000148 mmu-miR-136 12189 Brca1 gguaGUAGUUUUGUUUACCUCa || ||::||||||||| agccCAAGAAGGCAAAUGGAGu 2 19 134 155 [mm9:11:101359072-101359093:-] 0.5797 166 7 -21.69 -0.4225 MIMAT0000148 mmu-miR-136 12189 Brca1 gguaguaGUUUUGUUUACCUCa || | ||||||| augaagcCACUUCCAAUGGAGc 2 16 1456 1477 [mm9:11:101357750-101357771:-] 0.5344 143 7 -11.45 -0.1577 MIMAT0000150 mmu-miR-138 12189 Brca1 gccGGACUAAGUGU---UGUGGUCGa :|| |||| : :||||||| uuuUCUUUUUCAAGUGUGCACCAGCa 2 21 756 781 [mm9:11:101358446-101358471:-] 0.5712 147 7 -18.30 -0.3516 MIMAT0000151 mmu-miR-140 12189 Brca1 gauGGUAUCCCAUUUUGGU-GAc ||: || ||||||| || cauCCGCCUGGAAAAACCAGCUu 2 20 83 105 [mm9:11:101350976-101350998:-] 0.6123 123 0 -14.16 -0.4015 MIMAT0000156 mmu-miR-144 12189 Brca1 ucAUGUAGUAGAUAUGACau |::: ::|: |||||| gcUGUGCUGUUAAUACUGca 3 19 964 983 [mm9:11:101350098-101350117:-] 0.6868 130 0 -11.92 -0.3434 MIMAT0000159 mmu-miR-149 12189 Brca1 cccUCACUUCUGU--GCCUCGGUCu | |||:|| | | ||||||| gacACUGAGGAAAUUCAGAGCCAGa 2 21 537 561 [mm9:11:101350520-101350544:-] 0.4440 159 7 -21.47 -0.9212 MIMAT0000160 mmu-miR-150 12189 Brca1 guGACCAUGUUCCCAACCCUCu :| ||||| | ||||||| uaUUCGUACA--GAUUGGGAGa 2 21 1358 1377 [mm9:11:101357850-101357869:-] 0.5479 157 7 -21.50 -0.4368 MIMAT0000209 mmu-miR-129-5p 12189 Brca1 cguuCGGGUCUGGCGUUUUUc |:: | ||:||||| | ugcuGUUAAUACUGCAAAUAa 2 18 968 988 [mm9:11:101350093-101350113:-] 0.6868 125 0 -10.40 -0.1038 MIMAT0000210 mmu-miR-181a 12189 Brca1 ugaguggcugucgcaACUUACAa ||||||| auuauguauuugaugUGAAUGUg 2 9 561 583 [mm9:11:101350498-101350520:-] 0.4559 140 7 -8.78 -0.2350 MIMAT0000219 mmu-miR-24 12189 Brca1 gacaaGGACGACUUGACUCGGu |||| | ||||||| ucaagCCUGGAGUUCUGAGCCc 2 18 898 919 [mm9:11:101358308-101358329:-] 0.5694 153 7 -21.51 -0.2076 MIMAT0000219 mmu-miR-24 12189 Brca1 gacaAGGACGACUUGACUCGGu |||| || ||||||| cccaUCCU-CU-CUCUGAGCCu 2 19 929 948 [mm9:11:101358279-101358298:-] 0.5694 146 7 -19.54 -0.3173 MIMAT0000223 mmu-miR-193 12189 Brca1 ugAC-CCUGAAACAUC-CGGUCAa || || :||| || |||||| ugUGAGGUUUUUCAAGUGCCAGUg 2 21 580 603 [mm9:11:101350478-101350501:-] 0.5239 127 6 -16.08 -0.7861 MIMAT0000233 mmu-miR-200b 12189 Brca1 agUAGUAAUGGUCCGUCAUAAu | ::| ||:| ||||||| aaAAUGUCACUA--CAGUAUUu 2 21 1160 1179 [mm9:11:101358048-101358067:-] 0.5891 149 7 -10.12 -0.7661 MIMAT0000238 mmu-miR-205 12189 Brca1 gucUGAGGCCACCUUACUUCCu |:|::| | | |||||| auaAUUUUGCUUG-CUGAAGGa 2 20 814 834 [mm9:11:101350247-101350267:-] 0.6868 121 6 -13.22 -0.1465 MIMAT0000248 mmu-miR-30e 12189 Brca1 gaaggucAGUUCCUACAAAUGu | ||| |||||||: gauuauaUAAAGUAUGUUUAUa 2 16 939 960 [mm9:11:101350121-101350142:-] 0.6868 143 0 -10.44 -0.2133 MIMAT0000513 mmu-miR-19b 12189 Brca1 agUCAAAACGUACCUAAA-CGUGu ||| || | ||||| |||| gaAGUCUUCCCAAGAUUUCGCACc 2 22 667 690 [mm9:11:101358537-101358560:-] 0.5694 129 0 -9.26 -0.1091 MIMAT0000514 mmu-miR-30c 12189 Brca1 cgacucucacaUCCUACAAAUGu || |||||||: ugauuauauaaAGUAUGUUUAUa 2 13 938 960 [mm9:11:101350121-101350143:-] 0.6868 136 0 -9.51 -0.2113 MIMAT0000515 mmu-miR-30d 12189 Brca1 gaaggucagccCCUACAAAUGu | |||||||: gauuauauaaaGUAUGUUUAUa 2 12 939 960 [mm9:11:101350121-101350142:-] 0.6868 131 0 -8.81 -0.2192 MIMAT0000528 mmu-miR-18a 12189 Brca1 gauagacgugaUCUACGUGGAAu :|: ||||||| ucccacacggaGGGAGCACCUUc 2 13 797 819 [mm9:11:101358408-101358430:-] 0.5639 144 7 -17.31 -0.1609 MIMAT0000532 mmu-miR-23a 12189 Brca1 ccuUUAGGGACCGUUACACUa | |: || ||||||| uguAUUUGAUGUGAAUGUGAg 2 19 565 585 [mm9:11:101350496-101350516:-] 0.4679 146 7 -8.75 -0.1784 MIMAT0000535 mmu-miR-29a 12189 Brca1 auUGGCUAAAGUC---UACCACGAu ||| | |||| ||||||| gcACC--UCUCAGUCUUUGGUGCUu 2 21 30 52 [mm9:11:101351029-101351051:-] 0.6123 144 7 -18.29 -0.3635 MIMAT0000535 mmu-miR-29a 12189 Brca1 auuggcuaaAGUCUAC-CACGAu ||| ||| ||||| cucuaagcaUCACAUGAGUGCUg 2 14 307 329 [mm9:11:101358898-101358920:-] 0.5162 121 0 -13.41 -0.1530 MIMAT0000536 mmu-miR-29c 12189 Brca1 auuggcuaaaguuuACCACGAu ||||||| caccucucagucuuUGGUGCUu 2 9 31 52 [mm9:11:101351029-101351050:-] 0.6123 140 7 -16.43 -0.3635 MIMAT0000536 mmu-miR-29c 12189 Brca1 auuggcuaaAGUUUAC-CACGAu ||| ||| ||||| cucuaagcaUCACAUGAGUGCUg 2 14 307 329 [mm9:11:101358898-101358920:-] 0.5162 121 0 -13.41 -0.1530 MIMAT0000537 mmu-miR-27a 12189 Brca1 cgccUUGAAUCG--GUGACACUu |::|| | |||||||| ccacAGUUUUACAACACUGUGAu 2 18 365 387 [mm9:11:101358840-101358862:-] 0.4989 148 7 -13.66 -0.3441 MIMAT0000538 mmu-miR-31 12189 Brca1 gucGAUACGGUCGUAGA-ACGGa || | :|||| ||| |||| cuuCUCUCUCAGCCUCUGUGCCu 2 20 1504 1526 [mm9:11:101357701-101357723:-] 0.5631 131 0 -17.89 -0.3072 MIMAT0000541 mmu-miR-96 12189 Brca1 ucguuuuuACACGAUC-ACGGUUu ||| | || |||||| cagaucccUGUUCCAGAUGCCAAg 2 16 951 974 [mm9:11:101358253-101358276:-] 0.5694 123 6 -13.30 -0.2026 MIMAT0000546 mmu-miR-103 12189 Brca1 agUAUCGGGACAUGUUACGACGa :|| ::| || |||||||: aaGUAUGUUUAUA-AAUGCUGUg 2 22 948 969 [mm9:11:101350112-101350133:-] 0.6868 139 0 -13.04 -0.1002 MIMAT0000546 mmu-miR-103 12189 Brca1 aguauCGGGACAUGUUACGACGa |: |||| :||| |||| augcuGUGCUGU-UAAUACUGCa 2 19 962 983 [mm9:11:101350098-101350119:-] 0.6868 128 0 -13.28 -0.1226 MIMAT0000555 mmu-miR-324-5p 12189 Brca1 uguGGUUACG-GGAUCCCCU-ACGc || |||: ||| |||| ||| guuCCUAUGUACCU--GGGAGUGCa 2 21 1028 1050 [mm9:11:101358177-101358199:-] 0.5748 120 0 -19.72 -0.3071 MIMAT0004651 mmu-miR-340-5p 12189 Brca1 uuagucagaguaacgAAAUAUu |||||| auuauauaaaguaugUUUAUAa 2 8 940 961 [mm9:11:101350120-101350141:-] 0.6868 120 6 -4.67 -0.2376 MIMAT0000647 mmu-miR-107 12189 Brca1 acUAUCGGGACAUGUUACGACGa :|| ::| || |||||||: aaGUAUGUUUAUA-AAUGCUGUg 2 22 948 969 [mm9:11:101350112-101350133:-] 0.6868 139 0 -13.04 -0.1002 MIMAT0000647 mmu-miR-107 12189 Brca1 acuauCGGGACAUGUUACGACGa |: |||| :||| |||| augcuGUGCUGU-UAAUACUGCa 2 19 962 983 [mm9:11:101350098-101350119:-] 0.6868 128 0 -13.65 -0.1226 MIMAT0000651 mmu-miR-19a 12189 Brca1 agUCAAAACGUAUCUAAA-CGUGu ||| || | |||||| |||| gaAGUCUUCCCAAGAUUUCGCACc 2 22 667 690 [mm9:11:101358537-101358560:-] 0.5694 137 0 -11.73 -0.1091 MIMAT0000657 mmu-miR-200c 12189 Brca1 agguagUAAUGGGCCGUCAUAAu || | | ||||||| acuaaaAUGUCACUACAGUAUUu 2 18 1157 1179 [mm9:11:101358048-101358070:-] 0.5891 145 7 -10.70 -0.7944 MIMAT0000659 mmu-miR-212 12189 Brca1 accGGCACU-GACCUCUGACAAu :| | | || | ||||||| aacUCAUAAUCUUG-GACUGUUu 2 20 854 875 [mm9:11:101350206-101350227:-] 0.6868 144 7 -10.48 -1.0190 MIMAT0000659 mmu-miR-212 12189 Brca1 accggcacUGACCUCU-GACAAu ::|||:|| ||||| gucagcacGUUGGGGAUCUGUUu 2 15 1335 1357 [mm9:11:101357870-101357892:-] 0.5479 122 0 -19.61 -0.1665 MIMAT0000673 mmu-miR-181b 12189 Brca1 uggguggcugucguUACUUACAa :||||||| auuauguauuugauGUGAAUGUg 2 10 561 583 [mm9:11:101350498-101350520:-] 0.4559 141 7 -10.17 -0.2350 MIMAT0000674 mmu-miR-181c 12189 Brca1 ugaguggcuguccaACUUACAa ||||||| uuauguauuugaugUGAAUGUg 2 9 562 583 [mm9:11:101350498-101350519:-] 0.4559 140 7 -9.42 -0.2308 MIMAT0000677 mmu-miR-7a 12189 Brca1 uguuguuUUAGUGAUCAGAAGGu || | |:||||||| ----uuuAAGAAAUGGUCUUCCa 2 17 1 19 [mm9:11:101351062-101351080:-] 0.6123 152 7 -16.44 -0.8884 MIMAT0000677 mmu-miR-7a 12189 Brca1 uguuguuUUAGUGAUCA-GAAGGu |:|| :|:|| ||||| accucucAGUCUUUGGUGCUUCCa 2 17 32 55 [mm9:11:101351026-101351049:-] 0.6123 124 0 -17.94 -0.2994 MIMAT0000677 mmu-miR-7a 12189 Brca1 uguUGUUUUAGUGAUCAGAAGGu :||::| | |||||||| cucGCAGGA--AGAAGUCUUCCc 2 21 657 677 [mm9:11:101358550-101358570:-] 0.5694 149 7 -15.99 -0.2164 MIMAT0000678 mmu-miR-7b 12189 Brca1 uguuguuUUAGUGUUCAGAAGGu || | :||||||| ----uuuAAGAAAUGGUCUUCCa 2 17 1 19 [mm9:11:101351062-101351080:-] 0.6123 144 7 -14.07 -0.8884 MIMAT0000678 mmu-miR-7b 12189 Brca1 uguUGUUUUAGUGUUCAGAAGGu :||::| | ||||||||| cucGCAGGA--AGAAGUCUUCCc 2 21 657 677 [mm9:11:101358550-101358570:-] 0.5694 157 7 -16.82 -0.2164 MIMAT0000704 mmu-miR-361 12189 Brca1 cauggggaccUCUAAGACUAUu :|| ||||||| uuaaauacacGGACUCUGAUAu 2 13 681 702 [mm9:11:101350379-101350400:-] 0.6606 148 7 -12.95 -0.7474 MIMAT0000741 mmu-miR-377 12189 Brca1 uguUUUCA-ACGGAAAC-ACACUa |:| | ||: |||| ||||| gccAGAUUAUGUAUUUGAUGUGAa 2 20 556 579 [mm9:11:101350502-101350525:-] 0.4559 126 0 -11.90 -0.8059 MIMAT0000741 mmu-miR-377 12189 Brca1 ugUUUUCAACGGAAACA-CACUa ||:|| || ||| |||| gaAAGAGAUGGGCAUGUCGUGAg 2 21 321 343 [mm9:11:101350738-101350760:-] 0.4700 120 0 -10.45 -0.4535 MIMAT0003151 mmu-miR-378 12189 Brca1 ggaagacuGAGGUUCA-GGUCa :|:||||| |||| gugagguuUUUCAAGUGCCAGu 2 14 581 602 [mm9:11:101350479-101350500:-] 0.5239 121 0 -17.68 -0.6901 MIMAT0004745 mmu-miR-384-5p 12189 Brca1 ugUAACGGAUCCUUA-ACAAAUGu ||| : || |:| ||||||: ugAUUAUAUA-AAGUAUGUUUAUa 2 22 938 960 [mm9:11:101350121-101350143:-] 0.6868 134 0 -6.39 -0.2152 MIMAT0001092 mmu-miR-376b 12189 Brca1 uucaccuACAAGGAGAUACUa |||| ||||||| uucuccuUGUU--UCUAUGAg 2 15 999 1017 [mm9:11:101358210-101358228:-] 0.5694 147 7 -9.76 -0.2190 MIMAT0001095 mmu-miR-370 12189 Brca1 ugGUCCAAGGUGGGGUCGUCCg || | | ::| |||||||| uuCAAG-UGUGCACCAGCAGGu 2 21 764 784 [mm9:11:101358443-101358463:-] 0.5712 154 7 -20.38 -0.1704 MIMAT0004750 mmu-miR-425 12189 Brca1 aguugcccuCACUAGCACAGUAa ||| | ||||||| acaaauuuuGUGUUAGUGUCAUu 2 15 1546 1568 [mm9:11:101357659-101357681:-] 0.5456 154 7 -17.86 -0.8825 MIMAT0004750 mmu-miR-425 12189 Brca1 aguugcccuCACUA-GCACA-GUAa ||||| :|||| ||| uacaacacuGUGAUAUGUGUGCAUu 2 15 374 398 [mm9:11:101358829-101358853:-] 0.5119 121 0 -19.19 -0.5421 MIMAT0001420 mmu-miR-433 12189 Brca1 uguggcuccucggguAGUACUa |||||| aagagaacauauuuuUCAUGAa 2 8 834 855 [mm9:11:101350226-101350247:-] 0.6868 120 6 -9.69 -0.2351 MIMAT0001537 mmu-miR-429 12189 Brca1 ugccgUAAUGGU-CUGUCAUAAu | |::|| |||||||| acuaaAAUGUCACUACAGUAUUu 2 18 1157 1179 [mm9:11:101358048-101358070:-] 0.5891 152 7 -11.85 -0.7944 MIMAT0001546 mmu-miR-450a-5p 12189 Brca1 uauaauccUUG-UGUAGCGUUUu ||| | || ||||| ugcaaauaAACUAAAUAGCAAAc 2 15 980 1002 [mm9:11:101350079-101350101:-] 0.6868 121 0 -4.08 -0.1075 MIMAT0003112 mmu-miR-489 12189 Brca1 cgacgguAUAUAC-ACCACAGUAa | |:|| | ||||||| gacaaauUUUGUGUUAGUGUCAUu 2 17 1545 1568 [mm9:11:101357659-101357682:-] 0.5456 151 7 -14.27 -0.8859 MIMAT0003128 mmu-miR-485 12189 Brca1 cuuaAGUAGUGCCGGUCGGAGa || || | :||||||| uugaUCUUCUCUCUCAGCCUCu 2 19 1499 1520 [mm9:11:101357707-101357728:-] 0.5631 154 7 -18.23 -0.4464 MIMAT0003169 mmu-miR-539 12189 Brca1 ugUGUGGUUCCUAUUAAAGAGg | |:| | :||||||| caAGAUCCCUUAGGAUUUCUCu 2 21 1077 1098 [mm9:11:101358129-101358150:-] 0.5748 144 7 -13.20 -0.2158 MIMAT0003182 mmu-miR-494 12189 Brca1 cuccaaagggcaCAUACAAAgu |||||||| ugauuauauaaaGUAUGUUUau 3 11 938 959 [mm9:11:101350122-101350143:-] 0.6868 130 0 -8.44 -0.1403 MIMAT0003188 mmu-miR-503 12189 Brca1 gacGUCA-UGAC--AA-GGGCGACGAu || | |||| || ||||||||| caaCAAUAACUGAUUUGCCCGCUGCUc 2 21 1406 1432 [mm9:11:101357795-101357821:-] 0.5143 161 7 -23.96 -0.1220 MIMAT0003374 mmu-miR-302b 12189 Brca1 gaUGAUUUUGUACCUUC-GUGAAu | |: |: || |||| ||||| gcAGUGUAGGAU-GAAGCCACUUc 2 22 1446 1468 [mm9:11:101357759-101357781:-] 0.5057 123 0 -10.14 -0.2954 MIMAT0003889 mmu-miR-758 12189 Brca1 aucaccugguccAGUGUUu |||||| acuacaguauuuUCACAAa 2 8 1168 1186 [mm9:11:101358041-101358059:-] 0.6034 120 6 -9.15 -0.1313 MIMAT0003738 mmu-miR-496 12189 Brca1 cuCUAACCGGUACAUUAUGAgu | | ||::| ||||||| auGCUGUGCUGU-UAAUACUgc 3 21 962 982 [mm9:11:101350099-101350119:-] 0.6868 134 0 -9.73 -0.2223 MIMAT0003450 mmu-miR-488 12189 Brca1 cugguUCUUUGUCGGAA-AGUu | :|| |||||| ||| uggauAUGAAGAGCCUUCUCAa 2 17 1260 1281 [mm9:11:101357946-101357967:-] 0.5734 124 0 -16.18 -0.1825 MIMAT0003780 mmu-miR-490 12189 Brca1 gucguaccucagGAGGUCCAAc ||||||||| ugcuccucaaggCUCCAGGUUu 2 11 473 494 [mm9:11:101350587-101350608:-] 0.4694 150 7 -17.21 -0.3365 MIMAT0004324 mmu-miR-181d 12189 Brca1 uggguggcuguuguUACUUACAa :||||||| auuauguauuugauGUGAAUGUg 2 10 561 583 [mm9:11:101350498-101350520:-] 0.4559 141 7 -10.17 -0.2350 MIMAT0004324 mmu-miR-181d 12189 Brca1 ugGGUGGC----UGUUGU--UACU-UACAa |||| | |||||| :||| |||| guCCACAGUUUUACAACACUGUGAUAUGUg 2 22 363 392 [mm9:11:101358835-101358864:-] 0.4989 123 0 -17.53 -0.2765 MIMAT0004858 mmu-miR-18b 12189 Brca1 gauUGUCGUGAUCUACGUGGAAu ||| |: :|: ||||||| cccACA-CGGAGGGAGCACCUUc 2 21 798 819 [mm9:11:101358408-101358429:-] 0.5639 150 7 -17.31 -0.1609 MIMAT0004869 mmu-miR-421 12189 Brca1 cgcGGGUUAAUUACAGAC--AACUa ||| ||:| ||||| |||| gucCCCCUUUGAAGUCUGUCUUGAa 2 21 148 172 [mm9:11:101350909-101350933:-] 0.6123 120 0 -17.90 -0.9475 MIMAT0004896 mmu-miR-590-3p 12189 Brca1 ugAUCGAAUAUG---UAUUUUAAu |: :||:| | |||||||| ccUGAUUUGUUCCUUAUAAAAUUg 2 20 377 400 [mm9:11:101350681-101350704:-] 0.5326 150 7 -12.52 -0.6092 MIMAT0004936 mmu-miR-873 12189 Brca1 uccucuGAGUGUUCAAGGAcg || |: |||||| guggucCUGAUUUGUUCCUua 3 16 372 392 [mm9:11:101350689-101350709:-] 0.5326 127 0 -12.95 -0.1354 MIMAT0004936 mmu-miR-873 12189 Brca1 ucCUC-UG-AGUGUUCAAGGACg ||| || || |:||||||| ggGAGAACAGCAGAGGUUCCUGa 2 20 1372 1394 [mm9:11:101357833-101357855:-] 0.5354 157 7 -27.30 -0.2576

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G002127 MO000022954 Brca1 Mus musculus 12189 10660629 -44 -21 R21817; MOUSE$BRCA1_03; Binding factors: 53BP1 //-44 -18 R22176; MOUSE$BRCA1_04; Binding factors: DP-1:E2F-1 //-40 -33 R09626; MOUSE$BRCA1_02; Binding factors: E2F-1

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Brca1 mmu-miR-692 beg:314 end:330 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||.| |||||||| &5' ------GGTGG--AAAGAGAT 3' Brca1 mmu-miR-136 beg:920 end:935 pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& |...| ||||||| &5' --------AGGGC-AATGGAG- 3' Brca1 mmu-miR-669n beg:162 end:179 pic:3' TGTGTGTAGGTG-TGTGTTTA 5'& .||. ||||||| &5' ------GTCTTGAACACAAA- 3' Brca1 mmu-miR-2136 beg:508 end:521 pic:3' GTGTAGAGTCAGTTGTGGGTC 5'& |||||||||| &5' -----------CAACACCCAG 3' Brca1 mmu-miR-138star beg:484 end:502 pic:3' GGGACCACAACACTTCATCGGC 5'& || ||| ||||||| &5' -CCAGGTTT-----AGTAGCC- 3' Brca1 mmu-miR-7astar beg:369 end:388 pic:3' ATACCGTCTGACACTAAACAAC 5'& .|||. ||||||||| &5' -GTGGTCC----TGATTTGTT- 3' Brca1 mmu-miR-145star beg:733 end:742 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||||| &5' --------------CCAGGAA- 3' Brca1 mmu-miR-490 beg:480 end:494 pic:3' GTCGTACCTCAGGAGGTCCAAC 5'& || ||||||||| &5' ------GG----CTCCAGGTT- 3' Brca1 mmu-miR-327 beg:465 end:484 pic:3' TAGGAGTACGGGGAGTTCA 5'& ||| .|||.||||||| &5' ATCA--GTGCTCCTCAAG- 3' Brca1 mmu-miR-450b-5p beg:973 end:986 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& |||||||||| &5' -----------ATACTGCAAA- 3' Brca1 mmu-miR-130bstar beg:314 end:328 pic:3' TCATCACGTTGTC-CCTTTCTCA 5'& .| |||||||| &5' -----------GGTGGAAAGAG- 3' Brca1 mmu-miR-22star beg:348 end:363 pic:3' ATTTCGAACGGTGACTTCTTGA 5'& . |||||||||| &5' ---------TGACTGAAGAAC- 3' Brca1 mmu-miR-1933-3p beg:365 end:381 pic:3' TATCAGTGTGACTACCAGGACC 5'& .|| .|||||||| &5' --------GCTAGTGGTCCTG- 3' Brca1 mmu-miR-1839-3p beg:880 end:900 pic:3' CGACAACCATCTATTCATCCAGA 5'& |||| | .||||||||| &5' ----TTGGGGG--GAGTAGGTCT 3' Brca1 mmu-miR-466g beg:710 end:721 pic:3' ACACACACGTACACAGACATA 5'& |||||||| &5' ------------TGTCTGTA- 3' Brca1 mmu-miR-7b beg:3 end:20 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& .|||| .|||||||| &5' -----GAAAT----GGTCTTCCA 3' Brca1 mmu-miR-382star beg:567 end:582 pic:3' TTTTTCACAACAGGCACTTACT 5'& ||| .||||||| &5' --------TTGA-TGTGAATG- 3' Brca1 mghv-miR-M1-8 beg:116 end:128 pic:3' CTGGTTTGGGGGTCACTCACGA 5'& .|||.|||| &5' ------------GGTGGGTGC- 3' Brca1 mghv-miR-M1-9 beg:572 end:585 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& | ||||||| &5' ------------GTGAATGTGA 3' Brca1 mmu-let-7a beg:794 end:811 pic:3' TTGATATGTTGGATGATGGAGT 5'& ..| ||||||.||| &5' --------GGCATACTACTTCA 3' Brca1 mmu-let-7astar beg:244 end:270 pic:3' CCTTTCTGTCATCTAACAT-ATC 5'& |||.|||||||||| || |.| &5' GGAGAGACAGTAGAGTGGCTTGG 3' Brca1 mmu-let-7b beg:794 end:811 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& ..| ||||||.||| &5' --------GGCATACTACTTCA 3' Brca1 mmu-let-7bstar beg:329 end:351 pic:3' CCCTTCCGT----CATCCAACATATC 5'& .|||| ||. |||||||| &5' ----GGGCATGTCGTGAGTTGTATA- 3' Brca1 mmu-let-7c beg:794 end:811 pic:3' TTGGTATGTTGGATGATGGAGT 5'& ..| ||||||.||| &5' --------GGCATACTACTTCA 3' Brca1 mmu-let-7c-2star beg:244 end:270 pic:3' CCTTTCTGTCATCTAACAT-ATC 5'& |||.|||||||||| || |.| &5' GGAGAGACAGTAGAGTGGCTTGG 3' Brca1 mmu-let-7fstar beg:329 end:351 pic:3' CCCTTCCGT----TATCTAACATATC 5'& .|||| .|. ||||||| &5' ----GGGCATGTCGTGAGTTGTATA- 3' Brca1 mmu-let-7g beg:789 end:811 pic:3' TTGACATGTTTG-ATGATGGAGT 5'& .||| |..| ||||||.||| &5' -GCTG---AGGCATACTACTTCA 3' Brca1 mmu-let-7i beg:794 end:811 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& .|||. |||||.||| &5' ---GGCAT-----ACTACTTCA 3' Brca1 mmu-miR-101astar beg:335 end:358 pic:3' CGTAGTCGTGACAC-TATTGACT 5'& |.| ||. ||| ||.||||| &5' -CGTGAGT--TGTATATGACTGA 3' Brca1 mmu-miR-1186 beg:294 end:317 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& ||||| |||| |||||.|. &5' --TGCCTATAATCACAGCATTT 3' Brca1 mmu-miR-124star beg:158 end:176 pic:3' TAGTTCCAGGCGACACTTGTGC 5'& |||.|. ||||||| &5' ------GTCTGTCTTGAACAC- 3' Brca1 mmu-miR-125a-3p beg:656 end:676 pic:3' CCGAGGGTTC-TTGGAGTGGACA 5'& ||| |.||| |||| ||.. &5' -GCT-CTAAGTAACC-CATT--- 3' Brca1 mmu-miR-125bstar beg:366 end:387 pic:3' TCCAGGGTT-CTTGGACTGAACA 5'& |.|. | |||||.|||| &5' -----CTAGTGGTCCTGATTTGT 3' Brca1 mmu-miR-130bstar beg:818 end:839 pic:3' TCATCACGT-TGTCC-CTTTCTCA 5'& ||| .| |.||||| &5' -----TGCTTGCTGAAGGAAGAG- 3' Brca1 mmu-miR-132 beg:854 end:875 pic:3' GCTGGTACC-GACATCTGACAAT 5'& .||| || |.||||||| &5' ---TCATAATCT-TGGACTGTT- 3' Brca1 mmu-miR-145 beg:267 end:286 pic:3' TCCCTAAGGACCCT-TTTGACCTG 5'& ||| .|.||||.| &5' --------CTGATCTGAGCTGGGC 3' Brca1 mmu-miR-149 beg:540 end:562 pic:3' CCCTCACTTCTGT--GCCTCGGTCT 5'& |||.|| | |||||||| &5' -----TGAGGAAATTCAGAGCCAGA 3' Brca1 mmu-miR-16star beg:961 end:982 pic:3' AGTCGTCGTGTCAGTTATGACC 5'& || | | ||.||||||| &5' ---GCTGTGCTGTTAATACTG- 3' Brca1 mmu-miR-182 beg:582 end:607 pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& ||| |.||| ||.||| &5' -GGTTTTTCAAGTGCCAGTGTCAA- 3' Brca1 mmu-miR-1839-5p beg:95 end:112 pic:3' GTTCTGGACAAGATAGATGGAA 5'& ||| || ||||||| &5' ----ACCAG--CT-TCTACCT- 3' Brca1 mmu-miR-1907 beg:774 end:795 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& |||. | ||| |||.|||| &5' -CCTTTTGCTCC-CTGTTGCT- 3' Brca1 mmu-miR-190b beg:221 end:241 pic:3' TTGGGTTATAGTTTGTATAGT 5'& |.||| .|||||| &5' ---CTAATCTGTTGCATATC- 3' Brca1 mmu-miR-1928 beg:274 end:294 pic:3' CTCGA-CCGTTACATCGA 5'& ||||| |||| ||.|. &5' GAGCTGGGCATGGTGGT- 3' Brca1 mmu-miR-1940 beg:412 end:434 pic:3' TTGACGAGGTGGA-AGAGTCAGGAGGTA 5'& ||| || ||||||.|| &5' -------CCAAGAGTCA-AGTCCTTCA- 3' Brca1 mmu-miR-1946b beg:6 end:27 pic:3' TTTTCGTACACGGT-GGTGACGGGCCG 5'& ||| |.| ||| ||||||| &5' ------ATG-GTCTTCCA-TGCCCGG- 3' Brca1 mmu-miR-195 beg:781 end:795 pic:3' CGGTTATAAAGACACGACGAT 5'& || ||.||||. &5' ---------TCCCTGTTGCTG 3' Brca1 mmu-miR-195 beg:951 end:976 pic:3' CGGTTATAAA-GACACGACGAT 5'& |. ||| ||||||||.|| &5' GTTTATAAATGCTGTGCTGTTA 3' Brca1 mmu-miR-1961 beg:794 end:811 pic:3' AAGATTG-ATGATGGAGT 5'& ..| ||||||.||| &5' ----GGCATACTACTTCA 3' Brca1 mmu-miR-1962 beg:86 end:108 pic:3' TACACAGGGTCAC---GGTCGGAGA 5'& | || | |||||.||| &5' ----G-CCTGGAAAAACCAGCTTCT 3' Brca1 mmu-miR-199bstar beg:864 end:888 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |.|| || ||.|.|.|||| &5' GGACT-GTTTA-TAGATATTGGG 3' Brca1 mmu-miR-19a beg:219 end:239 pic:3' AGTCAAAACGTATCTA-AACGTGT 5'& ||| |||||.| &5' -------TGCTAATCTGTTGCATA 3' Brca1 mmu-miR-203 beg:699 end:714 pic:3' GATCACCAGGATTTGTAAAGTG 5'& |.||.||||||. &5' ----------TGAATATTTCAT 3' Brca1 mmu-miR-208a beg:151 end:170 pic:3' TGTTCGAAAAA-CGAGCAGAATA 5'& |||| | .|||||. &5' -----CTTTGAAGTCTGTCTTG- 3' Brca1 mmu-miR-20b beg:57 end:77 pic:3' GATGGACGTGATACTCGTGAAAC 5'& ||||. .|||| ||.|.||| &5' CTACT--TACTA--AGTATTTT- 3' Brca1 mmu-miR-214star beg:304 end:335 pic:3' CGTGTCGT---TCACA----TCTGTCCGT 5'& ||||||| .||| |||..|||| &5' -CACAGCATTTGGTGGAAAGAGATGGGCA 3' Brca1 mmu-miR-23b beg:563 end:585 pic:3' CCATTAGGGACCGTTACACTA 5'& ||| |. || ||||||| &5' -GTATTTGATGTGAATGTGA- 3' Brca1 mmu-miR-24 beg:259 end:282 pic:3' GACAA-GGA-CGACTTGACTCGGT 5'& || |.| ||||| ||||||. &5' --GTGGCTTGGCTGATCTGAGCT- 3' Brca1 mmu-miR-29a beg:34 end:52 pic:3' ATTGGCTAAAGTCT---ACCACGAT 5'& |||| ||||||| &5' ---------TCAGTCTTTGGTGCT- 3' Brca1 mmu-miR-29b beg:34 end:52 pic:3' TTGTGACTAAAGTTT---ACCACGAT 5'& |||. ||||||| &5' ----------TCAGTCTTTGGTGCT- 3' Brca1 mmu-miR-29bstar beg:83 end:104 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& ||.|| |||||||| &5' ----CCGCCTGGAAAAACCAGC 3' Brca1 mmu-miR-29c beg:29 end:52 pic:3' ATTGGCTAAAGTTT---ACCACGAT 5'& ||| |||. ||||||| &5' --ACCTC--TCAGTCTTTGGTGCT- 3' Brca1 mmu-miR-300 beg:217 end:239 pic:3' CTTCTCT-CGAAC-GGGAACGTAT 5'& ||| ||| |. ||||||| &5' ----AGATGCTAATCTGTTGCATA 3' Brca1 mmu-miR-3099 beg:620 end:636 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& |||||| ||||.|| &5' TCCCCA---------TAGCTTA 3' Brca1 mmu-miR-30a beg:860 end:879 pic:3' GAAGGTCAGCTCCT-ACAAATGT 5'& || ||| ||||||.| &5' -------TCTTGGACTGTTTATA 3' Brca1 mmu-miR-30astar beg:79 end:96 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& .|||||| |||.|| &5' -------GCATCCGCCTGGAA- 3' Brca1 mmu-miR-30e beg:860 end:879 pic:3' GAAGGTCAGTTCCT-ACAAATGT 5'& || ||| ||||||.| &5' -------TCTTGGACTGTTTATA 3' Brca1 mmu-miR-30estar beg:79 end:96 pic:3' CGACATTTGTAGGCTGACTTTC 5'& .|||||| |||.|| &5' -------GCATCCGCCTGGAA- 3' Brca1 mmu-miR-30estar beg:340 end:360 pic:3' CGACATTTGTAGGCTGACTTTC 5'& |.|||| .|||||||. &5' GTTGTATA----TGACTGAAG- 3' Brca1 mmu-miR-31star beg:280 end:291 pic:3' CTACCGTTATACAACCGTATCGT 5'& |||||.|. &5' --------------GGCATGGT- 3' Brca1 mmu-miR-322 beg:734 end:756 pic:3' AGGTTTTGTACTTAACGACGAC 5'& |||..| ||.|||.|||| &5' -CCAGGAAAGGAGTTGTTGCT- 3' Brca1 mmu-miR-322 beg:773 end:796 pic:3' AGGTTT-TGTACTTAACGACGAC 5'& || .| ||.||||| &5' -CCTTTTGCTCCC--TGTTGCTG 3' Brca1 mmu-miR-327 beg:419 end:436 pic:3' TAGGAGTACGGGGAGTTCA 5'& ||| |.||.||||| &5' ----TCAAGTCCTTCAAG- 3' Brca1 mmu-miR-328 beg:915 end:938 pic:3' TGCCTTCCCGTC-TCTCCCGGTC 5'& |.| ||||||| .||| || &5' ATGCAAGGGCAATGGAGA-CC-- 3' Brca1 mmu-miR-33 beg:636 end:659 pic:3' ACGTTACGTTGATGTTA-CGTG 5'& |||.||.| ||. .| ||| &5' -GCAGTGTATCTGTTGTAGCA- 3' Brca1 mmu-miR-331-5p beg:287 end:303 pic:3' CCTAGGGACCCTGGTATGGATC 5'& ||| ||. |.|||| &5' -------TGGTACT-TGCCTA- 3' Brca1 mmu-miR-337-3p beg:265 end:283 pic:3' TCCGTAGTATATCCTCGACTT 5'& ||| || ||||||. &5' -GGCTG---ATCTGAGCTGG- 3' Brca1 mmu-miR-375 beg:344 end:366 pic:3' AGTGCGCTCGGCTTGCTTGTTT 5'& .| .|| |.||| ||||||| &5' -TATATGA-CTGAA-GAACAAA 3' Brca1 mmu-miR-411star beg:224 end:239 pic:3' CCAATCACCTGGCACAATGTAT 5'& |.| ||||.|||| &5' ---------ATC-TGTTGCATA 3' Brca1 mmu-miR-431 beg:523 end:541 pic:3' ACGTACTGCCGG--ACGTTCTGT 5'& ||.. ||||.|||| &5' --------GGTTTGTGCAGGACA 3' Brca1 mmu-miR-432 beg:470 end:490 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& |||.| || .|||||.| &5' -TGCTC-CTCAAG-GCTCCAGG- 3' Brca1 mmu-miR-433 beg:833 end:855 pic:3' TGTGGCTCCTCGGGT------AGTACTA 5'& ||| || |||||| &5' --------GAGAACATATTTTTCATGA- 3' Brca1 mmu-miR-448 beg:901 end:924 pic:3' TACCCTGTAGGATGTATACGTT 5'& ||| | || .||||||| &5' -TGGCCCCCCCCA-GTATGCAA 3' Brca1 mmu-miR-450a-3p beg:467 end:483 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||. || |||.||| &5' -------CAGTGC-TCCTCAA- 3' Brca1 mmu-miR-455 beg:860 end:874 pic:3' CACATATACGGGCACCTGACG 5'& .| |||||||. &5' ----------TCTTGGACTGT 3' Brca1 mmu-miR-465a-3p beg:365 end:384 pic:3' AGATGAATCTTTCCGGGACTAG 5'& .| ||| ||.||||||. &5' ---GC-TAGT--GGTCCTGATT 3' Brca1 mmu-miR-465b-3p beg:365 end:384 pic:3' AGATGAATCTTTCCGGGACTAG 5'& .| ||| ||.||||||. &5' ---GC-TAGT--GGTCCTGATT 3' Brca1 mmu-miR-465c-3p beg:365 end:384 pic:3' AGATGAATCTTTCCGGGACTAG 5'& .| ||| ||.||||||. &5' ---GC-TAGT--GGTCCTGATT 3' Brca1 mmu-miR-470 beg:587 end:611 pic:3' TGAGTGGTCACGGTCA-GGTTCTT 5'& .||| ||||||||| .||||.| &5' -TTCA--AGTGCCAGTGTCAAGGA 3' Brca1 mmu-miR-485 beg:89 end:108 pic:3' CTTAAGTAGTGCC-----GGTCGGAGA 5'& || |||||.||| &5' -----------GGAAAAACCAGCTTCT 3' Brca1 mmu-miR-488 beg:569 end:595 pic:3' CTGGTTCTTTG---TCGGAAAGTT 5'& ||. ||| .|..|||||| &5' GATGT-GAATGTGAGGTTTTTCAA 3' Brca1 mmu-miR-503star beg:961 end:981 pic:3' GGTCCGTCACCTTTGTTATGAG 5'& || ||| .|||||| &5' ----GCTGTGCTGTTAATACT- 3' Brca1 mmu-miR-539 beg:757 end:776 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& . | .||||||||.| &5' -----TTGAA-GTAATTTCTTC 3' Brca1 mmu-miR-540-3p beg:890 end:909 pic:3' GGTCCTAGCTGGAGACTGGA 5'& .||| || .|||||.|| &5' -TAGG-TCT-TCTCTGGCC- 3' Brca1 mmu-miR-541 beg:411 end:431 pic:3' TCACACTGGTTG-TAGTCTTAGGGAA 5'& |.|||| .||| |.|||.| &5' -----GGCCAAGAGTCA-AGTCCTT- 3' Brca1 mmu-miR-546 beg:194 end:211 pic:3' CTGAGGCACGGTGGTA 5'& .||. | |||||| &5' -GCTTTATCCCACCA- 3' Brca1 mmu-miR-680 beg:205 end:226 pic:3' GGGGGTACAGTCG-TCTACGGG 5'& ||| | ||| ||||||. &5' ---CCAATTGAGCAAGATGCT- 3' Brca1 mmu-miR-692 beg:238 end:254 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |. || .||||| &5' -------GTTCTTGGAGAGA- 3' Brca1 mmu-miR-692 beg:417 end:441 pic:3' CTCAC-TCCGCGAGTTTCTCTA 5'& |||| || | .||||.||||| &5' GAGTCAAGTCCTTCAAGGAGAT 3' Brca1 mmu-miR-693-5p beg:435 end:459 pic:3' CTTTTGAAAGCCT-ACACCGAC 5'& || .||| | |||||.| &5' GATGGCTTGAGATCTGTGGTT- 3' Brca1 mmu-miR-696 beg:908 end:928 pic:3' GGGTGTCGTTCGTGTGCG 5'& ||| |||.| ||| . || &5' CCC-CAGTATGCAAGGGC 3' Brca1 mmu-miR-702 beg:111 end:126 pic:3' CTCGCCCCATTTCCCACCCGT 5'& || .||||||||. &5' -------GT-GAGGGTGGGT- 3' Brca1 mmu-miR-704 beg:322 end:339 pic:3' GATCCTCGTCTCGTGTACAGA 5'& ||| | .|||||| &5' ----GAGAT--GGGCATGTC- 3' Brca1 mmu-miR-705 beg:50 end:70 pic:3' ACGG-GTGGGGTGGAGGGTGG 5'& || |||||.||.| |.| &5' --CCACACCCTACTTACTA-- 3' Brca1 mmu-miR-706 beg:571 end:593 pic:3' AAAAAACTCTGT--C-CCAAAGAGA 5'& || || | |||||.|| &5' -----TGTGAATGTGAGGTTTTTC- 3' Brca1 mmu-miR-743a beg:31 end:55 pic:3' AGATGAGTCG--AACCACAGAAAG 5'& || |||||. |||||| ||| | &5' -CT-CTCAGTCTTTGGTG-CTTCC 3' Brca1 mmu-miR-760 beg:536 end:559 pic:3' AGGGGTG---TCTG--GGTCTCGGC 5'& ||| .|| .||||||| &5' ----CACTGAGGAAATTCAGAGCC- 3' Brca1 mmu-miR-761 beg:636 end:655 pic:3' ACACAGTCAAAGTGGGACGACG 5'& | |||| .|||.||. &5' ---G-CAGTGTA--TCTGTTGT 3' Brca1 mmu-miR-7a beg:0 end:20 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .||.| |.|||||||| &5' ----TAAGAAA--TGGTCTTCCA 3' Brca1 mmu-miR-802 beg:781 end:797 pic:3' TTCCTACTTAGAAACAATGACT 5'& || ||||.|||| &5' ---------TCCCTGTTGCTGA 3' Brca1 mmu-miR-877 beg:663 end:684 pic:3' GGGACGC--GGT-AGAGGAGATG 5'& |. ||| |||.||.|| &5' ----GTAACCCATTCTTCTTTA- 3' Brca1 mmu-miR-96 beg:592 end:607 pic:3' TCGTTTTTACACGATCACGGTTT 5'& |||| ||||.||| &5' ---------GTGCCAGTGTCAA- 3' Brca1 mmu-miR-467g beg:561 end:584 pic:3' TATATACAC-ACACATACATAT 5'& ||.||| || |||| ||||. &5' ATGTATTTGATGTGAATGTG-- 3' Brca1 mmu-miR-1938 beg:193 end:210 pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& |.|| ||||||| &5' -----AGCTTTA--TCCCACC- 3' Brca1 mmu-miR-669f beg:333 end:353 pic:3' TATGCACA-CACACATACATATAC 5'& ||| ||| || |||||||| &5' -----TGTCGTGAGT-TGTATATG 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Brca1 RAID00053173 mmu-miR-107-3p miRNA MIMAT0000647 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID00121278 mmu-miR-488-3p miRNA MIMAT0003450 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00134716 mmu-miR-30c-5p miRNA MIMAT0000514 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID00154943 mmu-miR-193a-3p miRNA MIMAT0000223 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00225320 mmu-miR-181b-5p miRNA MIMAT0000673 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00272711 mmu-miR-494-3p miRNA MIMAT0003182 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID00285216 mmu-miR-433-3p miRNA MIMAT0001420 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00291038 mmu-miR-200b-3p miRNA MIMAT0000233 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00414521 mmu-miR-3090-5p miRNA MIMAT0014901 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00463371 mmu-miR-205-5p miRNA MIMAT0000238 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00500780 mmu-miR-539-5p miRNA MIMAT0003169 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00695247 mmu-miR-590-3p miRNA MIMAT0004896 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00722794 mmu-miR-23a-3p miRNA MIMAT0000532 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00791222 mmu-miR-212-3p miRNA MIMAT0000659 Brca1 mRNA 12189 Prediction 0.2202 Brca1 RAID00905510 mmu-miR-370-3p miRNA MIMAT0001095 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID00924027 mmu-miR-30b-5p miRNA MIMAT0000130 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID00978593 mmu-miR-450a-5p miRNA MIMAT0001546 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID00987581 mmu-miR-324-5p miRNA MIMAT0000555 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01082928 mmu-miR-138-5p miRNA MIMAT0000150 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01150512 mmu-miR-455-3p miRNA MIMAT0003742 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01205712 mmu-miR-490-3p miRNA MIMAT0003780 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01245707 mmu-miR-19b-3p miRNA MIMAT0000513 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01269208 mmu-miR-873a-5p miRNA MIMAT0004936 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01381595 mmu-miR-18b-5p miRNA MIMAT0004858 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01437202 mmu-miR-377-3p miRNA MIMAT0000741 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01471755 mmu-miR-29a-3p miRNA MIMAT0000535 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01568021 mmu-miR-132-3p miRNA MIMAT0000144 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID01581988 mmu-miR-384-5p miRNA MIMAT0004745 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID01584388 mmu-miR-7a-5p miRNA MIMAT0000677 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01661349 mmu-let-7a-2-3p miRNA MIMAT0017015 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01689783 mmu-miR-149-5p miRNA MIMAT0000159 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01710197 mmu-miR-425-5p miRNA MIMAT0004750 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01728745 mmu-miR-181a-5p miRNA MIMAT0000210 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01776984 mmu-miR-128-3p miRNA MIMAT0000140 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01895377 mmu-miR-30a-5p miRNA MIMAT0000128 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID01904684 mmu-miR-24-3p miRNA MIMAT0000219 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01922381 mmu-miR-30d-5p miRNA MIMAT0000515 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID01923228 mmu-miR-758-3p miRNA MIMAT0003889 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01952336 mmu-miR-376b-3p miRNA MIMAT0001092 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01985331 mmu-miR-136-5p miRNA MIMAT0000148 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID01988668 mmu-miR-181c-5p miRNA MIMAT0000674 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02042941 mmu-miR-200c-3p miRNA MIMAT0000657 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02114166 mmu-miR-6952-5p miRNA MIMAT0027804 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02289356 mmu-miR-31-5p miRNA MIMAT0000538 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02318342 mmu-miR-15b-5p miRNA MIMAT0000124 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02328284 mmu-miR-27a-3p miRNA MIMAT0000537 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02433681 mmu-miR-27b-3p miRNA MIMAT0000126 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02499160 mmu-miR-6516-5p miRNA MIMAT0027343 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02531600 mmu-miR-18a-5p miRNA MIMAT0000528 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02603717 mmu-miR-496a-3p miRNA MIMAT0003738 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID02696519 mmu-miR-29b-3p miRNA MIMAT0000127 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02715734 mmu-miR-30e-5p miRNA MIMAT0000248 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID02729828 mmu-miR-7683-5p miRNA MIMAT0029886 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02763623 mmu-miR-340-5p miRNA MIMAT0004651 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID02841846 mmu-miR-103-3p miRNA MIMAT0000546 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID02845533 mmu-miR-489-3p miRNA MIMAT0003112 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02895087 mmu-miR-96-5p miRNA MIMAT0000541 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02931469 mmu-miR-485-5p miRNA MIMAT0003128 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID02947403 mmu-miR-125a-3p miRNA MIMAT0004528 Brca1 mRNA 12189 Prediction 0.2202 Brca1 RAID02962288 mmu-miR-144-3p miRNA MIMAT0000156 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID03072228 mmu-miR-378a-3p miRNA MIMAT0003151 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03230418 mmu-miR-429-3p miRNA MIMAT0001537 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03254385 mmu-miR-6950-5p miRNA MIMAT0027800 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03290703 mmu-miR-29c-3p miRNA MIMAT0000536 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03314815 mmu-miR-451b miRNA MIMAT0025178 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03355585 mmu-miR-7b-5p miRNA MIMAT0000678 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03363287 mmu-miR-302b-3p miRNA MIMAT0003374 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03371534 mmu-miR-3089-5p miRNA MIMAT0014899 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03424171 mmu-miR-421-3p miRNA MIMAT0004869 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03444232 mmu-miR-181d-5p miRNA MIMAT0004324 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03455599 mmu-miR-129-5p miRNA MIMAT0000209 Brca1 mRNA 12189 CLIP-seq//Prediction 0.6308 Brca1 RAID03488581 mmu-miR-1948-5p miRNA MIMAT0017344 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03648446 mmu-miR-23b-3p miRNA MIMAT0000125 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03791729 mmu-miR-124-3p miRNA MIMAT0000134 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03800425 mmu-miR-140-5p miRNA MIMAT0000151 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03805871 mmu-miR-19a-3p miRNA MIMAT0000651 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID03861857 mmu-miR-483-3p miRNA MIMAT0003120 Brca1 mRNA 12189 RT-PCR//RNA-seq 0.8785 Brca1 RAID03980091 mmu-miR-150-5p miRNA MIMAT0000160 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID04007162 mmu-miR-1933-3p miRNA MIMAT0009397 Brca1 mRNA 12189 Prediction 0.1828 Brca1 RAID04017343 mmu-miR-361-5p miRNA MIMAT0000704 Brca1 mRNA 12189 Prediction 0.2202 Brca1 RAID04028115 mmu-miR-503-5p miRNA MIMAT0003188 Brca1 mRNA 12189 Prediction 0.1828