DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT581988 mmu-miR-329-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581988 mmu-miR-329-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT581995 mmu-miR-691 Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581995 mmu-miR-691 Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23597149 MIRT581995 mmu-miR-691 Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT581995 mmu-miR-691 Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT581989 mmu-miR-362-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581989 mmu-miR-362-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT581992 mmu-miR-466f-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581992 mmu-miR-466f-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT581992 mmu-miR-466f-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT581993 mmu-miR-466i-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581993 mmu-miR-466i-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT581993 mmu-miR-466i-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT581994 mmu-miR-3074-5p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581994 mmu-miR-3074-5p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23597149 MIRT581994 mmu-miR-3074-5p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT581994 mmu-miR-3074-5p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT581990 mmu-miR-466m-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581990 mmu-miR-466m-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT581991 mmu-miR-466o-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581991 mmu-miR-466o-3p Mus musculus Pcgf2 22658 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 22658 Pcgf2 cguuccgucaccggACAUGUca |||||| uauaaauauauauaUGUACAua 3 9 139 160 [mm9:11:97551141-97551162:-] 0.6317 120 0 -6.53 -0.1772 MIMAT0004546 mmu-miR-202-5p 22658 Pcgf2 uuUCUUCAUAUACGUAUCCUu | | |||:| ||||||| auAUAUAUAUGUACAUAGGAa 2 20 144 164 [mm9:11:97551137-97551157:-] 0.6317 159 7 -15.35 -1.3300 MIMAT0004622 mmu-let-7c-1* 22658 Pcgf2 ccuuucgaucuuccaACAUGUc |||||| auauaaauauauauaUGUACAu 2 8 138 159 [mm9:11:97551142-97551163:-] 0.6317 120 6 -5.03 -0.1408 MIMAT0003387 mmu-miR-376a* 22658 Pcgf2 ugAGUAUCUUCCUCUUAGAUGg |: || || | ||||||: ggUUUUAUAAAUA-AAUCUAUa 2 21 114 134 [mm9:11:97551167-97551187:-] 0.6137 134 0 -5.68 -0.5304 MIMAT0002107 mmu-miR-466a-3p 22658 Pcgf2 agaAUACACACGCACAUACAUau ||| | : | |||||| auaUAUAAAUAUAUAUAUGUAca 3 21 136 158 [mm9:11:97551143-97551165:-] 0.6317 128 0 -3.30 -0.3541 MIMAT0002108 mmu-miR-467a-1* 22658 Pcgf2 cacAUCCACACACAUACAUAUa || | | | ||| |||| aaaUAAAUCUAUAUAUAUAUAa 2 20 122 143 [mm9:11:97551158-97551179:-] 0.6137 123 0 -1.95 -0.2675 MIMAT0004781 mmu-miR-532-3p 22658 Pcgf2 acguucGGAACCCACACCCUCc ::|| | ||||||| cucccaUUUUCAGAGUGGGAGg 2 17 90 111 [mm9:11:97551190-97551211:-] 0.6137 148 7 -18.51 -0.5019 MIMAT0003474 mmu-miR-694 22658 Pcgf2 gaaguccguuGUAAAAGUc |||||||| ugguuccuccCAUUUUCAg 2 10 84 102 [mm9:11:97551199-97551217:-] 0.6137 145 7 -12.09 -0.2206 MIMAT0004827 mmu-miR-297b-3p 22658 Pcgf2 auacccaUACACACAUACAUau || | | |||||| uauauaaAUAUAUAUAUGUAca 3 16 137 158 [mm9:11:97551143-97551164:-] 0.6317 131 0 -3.21 -0.3456 MIMAT0003492 mmu-miR-702 22658 Pcgf2 cucGCCCCAUUUCCCACCCGu | | ||::: ||||||: uuuCAGAGUGGGAGGUGGGUu 2 19 97 117 [mm9:11:97551184-97551204:-] 0.6137 138 0 -24.76 -0.1168 MIMAT0004864 mmu-miR-297a* 22658 Pcgf2 auacccaUACACACAUACAUau || | | |||||| uauauaaAUAUAUAUAUGUAca 3 16 137 158 [mm9:11:97551143-97551164:-] 0.6317 131 0 -3.21 -0.3456 MIMAT0004866 mmu-miR-297c* 22658 Pcgf2 auacccaUACACACAUACAUau || | | |||||| uauauaaAUAUAUAUAUGUAca 3 16 137 158 [mm9:11:97551143-97551164:-] 0.6317 131 0 -3.21 -0.3456 MIMAT0004876 mmu-miR-466b-3p 22658 Pcgf2 agaAUACACACGCACAUACAUau ||| | : | |||||| auaUAUAAAUAUAUAUAUGUAca 3 21 136 158 [mm9:11:97551143-97551165:-] 0.6317 128 0 -3.30 -0.3541 MIMAT0005453 mmu-miR-466b-3-3p 22658 Pcgf2 agaAUACACACGCACAUACAUaa ||| | : | |||||| auaUAUAAAUAUAUAUAUGUAca 3 21 136 158 [mm9:11:97551143-97551165:-] 0.6317 128 0 -3.30 -0.3541 MIMAT0004878 mmu-miR-466c-3p 22658 Pcgf2 agaAUACACACGCACAUACAUau ||| | : | |||||| auaUAUAAAUAUAUAUAUGUAca 3 21 136 158 [mm9:11:97551143-97551165:-] 0.6317 128 0 -3.30 -0.3541 MIMAT0004880 mmu-miR-466e-3p 22658 Pcgf2 agaAUACACACGCACAUACAUau ||| | : | |||||| auaUAUAAAUAUAUAUAUGUAca 3 21 136 158 [mm9:11:97551143-97551165:-] 0.6317 128 0 -3.30 -0.3541 MIMAT0004887 mmu-miR-467d* 22658 Pcgf2 cacAUCCACACACAUACAUAUa || | | | ||| |||| aaaUAAAUCUAUAUAUAUAUAa 2 20 122 143 [mm9:11:97551158-97551179:-] 0.6137 123 0 -1.95 -0.2675 MIMAT0004931 mmu-miR-466d-3p 22658 Pcgf2 gaUACACACGCACAUACAUau || | : | |||||| auAUAAAUAUAUAUAUGUAca 3 20 138 158 [mm9:11:97551143-97551163:-] 0.6317 123 0 -3.21 -0.3541 MIMAT0004938 mmu-miR-875-3p 22658 Pcgf2 guaucGGAGUCAUAAAAGUCc |||| |||||||| ugguuCCUC-CCAUUUUCAGa 2 17 84 103 [mm9:11:97551198-97551217:-] 0.6137 150 7 -13.96 -0.7207 MIMAT0005294 mmu-miR-467e* 22658 Pcgf2 uaUAUCCACACACAUACAUAUa ||| | | | ||| |||| aaAUAAAUCUAUAUAUAUAUAa 2 21 122 143 [mm9:11:97551158-97551179:-] 0.6137 128 0 -1.95 -0.2675 MIMAT0005838 mmu-miR-669j 22658 Pcgf2 acaaacguacacucAUAUACGu ||||||: uauauauaaauauaUAUAUGUa 2 9 135 156 [mm9:11:97551145-97551166:-] 0.6317 124 0 -8.64 -0.2072 MIMAT0005839 mmu-miR-669f 22658 Pcgf2 uaugcacacACACAUACAUAUAc | | ||| ||||| auaaauaaaUCUAUAUAUAUAUa 2 15 120 142 [mm9:11:97551159-97551181:-] 0.6137 122 0 -0.95 -0.2586 MIMAT0005840 mmu-miR-669i 22658 Pcgf2 caUACGUACACACAUAUACGu || :| | | ||||||: auAUAUAAAUAUAUAUAUGUa 2 20 136 156 [mm9:11:97551145-97551165:-] 0.6317 135 0 -7.16 -0.2072 MIMAT0005854 mmu-miR-467g 22658 Pcgf2 uaUAUACACACACAUACAUau ||| | | | |||||| auAUAAAUAUAUAUAUGUAca 3 20 138 158 [mm9:11:97551143-97551163:-] 0.6317 135 0 -4.61 -0.3484 MIMAT0005854 mmu-miR-467g 22658 Pcgf2 uaUAUACACACACAUACAUAu ||| | | | ||| ||| aaAUAAAUCUAUAUAUAUAUa 2 20 122 142 [mm9:11:97551159-97551179:-] 0.6137 123 0 -0.73 -0.3036 MIMAT0009404 mmu-miR-1940 22658 Pcgf2 uuGACGAGGUGGAAGAGUC--AGGAGGua || :|: ||:||| | | |||||| caCU-UUUGACUUUCCCUGGUUCCUCCca 3 26 68 95 [mm9:11:97551206-97551233:-] 0.6137 142 0 -21.22 -0.1200 MIMAT0009424 mmu-miR-1953 22658 Pcgf2 gucuucgGACUCUUGAAAGGGu || :|||||||| uuuuccaCUUUUGACUUUCCCu 2 16 63 84 [mm9:11:97551217-97551238:-] 0.6137 147 7 -15.23 -0.8083 MIMAT0009442 mmu-miR-1969 22658 Pcgf2 uggguacaauuucagaGGUAGAa |||||| cccucuccuuccgcagCCAUCUu 2 8 10 32 [mm9:11:97551269-97551291:-] 0.6137 120 6 -13.12 -0.1214 MIMAT0009459 mmu-miR-1982* 22658 Pcgf2 ggAGGGGUCCUGGGAGGGUu |:||| || :||||||| cuUUCCCUGGUUCCUCCCAu 2 19 77 96 [mm9:11:97551205-97551224:-] 0.6137 166 7 -31.08 -1.0098 MIMAT0011215 mmu-miR-2139 22658 Pcgf2 cgucaaugguccucgucGCGUCGa |||||| aagggacccucuccuucCGCAGCc 2 8 4 27 [mm9:11:97551274-97551297:-] 0.6137 120 6 -15.48 -0.1136 MIMAT0015641 mmu-miR-3470b 22658 Pcgf2 ggucggaccAGAUGUCUCACu |:| ||||||| uuccucccaUUUUCAGAGUGg 2 13 87 107 [mm9:11:97551194-97551214:-] 0.6137 148 7 -18.44 -0.5865 MIMAT0000147 mmu-miR-135a 22658 Pcgf2 aguguauccuuauuuuUCGGUAu |||||| gacccucuccuuccgcAGCCAUc 2 8 8 30 [mm9:11:97551271-97551293:-] 0.6137 120 6 -6.87 -0.1133 MIMAT0000237 mmu-miR-204 22658 Pcgf2 uccguauccuacugUUUCCCUu ||||||| ------------ggAAAGGGAc 2 9 1 10 [mm9:11:97551291-97551300:-] 0.6137 140 7 -8.47 -0.3952 MIMAT0000612 mmu-miR-135b 22658 Pcgf2 aguguauccuuacuuuUCGGUAu |||||| gacccucuccuuccgcAGCCAUc 2 8 8 30 [mm9:11:97551271-97551293:-] 0.6137 120 6 -8.19 -0.1133 MIMAT0000668 mmu-miR-211 22658 Pcgf2 uccguuuccuacugUUUCCCUu ||||||| ------------ggAAAGGGAc 2 9 1 10 [mm9:11:97551291-97551300:-] 0.6137 140 7 -8.47 -0.3952 MIMAT0001076 mmu-miR-384-3p 22658 Pcgf2 uaacacuuguuaaagAUCCUUa |||||| auauauauauguacaUAGGAA- 2 8 144 164 [mm9:11:97551137-97551157:-] 0.6317 120 6 -7.27 -0.3631 MIMAT0001533 mmu-miR-448 22658 Pcgf2 uacccuguaggAUGUAUACGUu ||:|||||:| auauauaaauaUAUAUAUGUAc 2 12 136 157 [mm9:11:97551144-97551165:-] 0.6317 135 0 -9.17 -0.1142

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G038262 Pcgf2 Mus musculus 22658

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Pcgf2 mmu-miR-202-5p beg:146 end:163 pic:3' TTTCTTCATATAC--GTATCCTT 5'& |||||| ||||||| &5' -------TATATGTACATAGGA- 3' Pcgf2 mmu-miR-1953 beg:67 end:84 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& || .|||||||| &5' -------CTTTTGACTTTCCC- 3' Pcgf2 mmu-miR-532-3p beg:101 end:112 pic:3' ACGTTCGGAACCCACACCCTCC 5'& |||||||| &5' --------------GTGGGAGG 3' Pcgf2 mcmv-miR-m21-1 beg:69 end:86 pic:3' GCCGAACTTGCACAGGGGATA 5'& .||| || |.||||. &5' ---TTTG-ACT--TTCCCTG- 3' Pcgf2 mghv-miR-M1-7-5p beg:17 end:34 pic:3' TCCAATGGCGTGGAGGTGGAAA 5'& ||||| |||.|||| &5' ------CCGCAG--CCATCTTT 3' Pcgf2 mghv-miR-M1-7-5p beg:52 end:75 pic:3' TCCAATGGCGTGGAGGTGGAAA 5'& || || | ..|||||.||| &5' -GGGCCCC-CTTTTCCACTTTT 3' Pcgf2 mmu-miR-1196 beg:97 end:119 pic:3' TCCGTCT--CCGTCCATCTAAA 5'& |||| || ||||.|.||| &5' ---CAGAGTGGGAGGTGGGTTT 3' Pcgf2 mmu-miR-190 beg:125 end:150 pic:3' TGGAT-TATATA-GTTTGTATAGT 5'& |.||| |||||| .|||.|||| &5' ATCTATATATATATAAATATAT-- 3' Pcgf2 mmu-miR-1982star beg:74 end:95 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& |.|.||| || ||||||| &5' CTTTCCCTGGTTCCTCCCA- 3' Pcgf2 mmu-miR-24 beg:38 end:60 pic:3' GACAAGGACGACTT-GACTCGGT 5'& ||..| || |||.||| &5' ---TTTTTACTTTTTCTGGGCC- 3' Pcgf2 mmu-miR-3473 beg:19 end:36 pic:3' CCGACTCGGTAGAGAGGT 5'& || ||||||||.|.| &5' -GC--AGCCATCTTTTC- 3' Pcgf2 mmu-miR-3473 beg:50 end:70 pic:3' CCGACTCGGTA-GAGAGGT 5'& |||.||| .|.|||| &5' --CTGGGCCCCCTTTTCCA 3' Pcgf2 mmu-miR-465a-3p beg:67 end:89 pic:3' AGATGAAT-CTTTCCGGGACTAG 5'& |||| || |||||.|. &5' ---ACTTTTGACTTTCCCTGGTT 3' Pcgf2 mmu-miR-465b-3p beg:67 end:89 pic:3' AGATGAAT-CTTTCCGGGACTAG 5'& |||| || |||||.|. &5' ---ACTTTTGACTTTCCCTGGTT 3' Pcgf2 mmu-miR-465c-3p beg:67 end:89 pic:3' AGATGAAT-CTTTCCGGGACTAG 5'& |||| || |||||.|. &5' ---ACTTTTGACTTTCCCTGGTT 3' Pcgf2 mmu-miR-540-5p beg:97 end:120 pic:3' TGTCTCAGTCTCCCACTGGGAAC 5'& |||||| .|| ||||. ..|| &5' -CAGAGTGGGA-GGTGGGTTTT- 3' Pcgf2 mmu-miR-702 beg:99 end:117 pic:3' CTCGCCCCATTTCCCACCCGT 5'& |||.||| ||||||. &5' GAGTGGGA-----GGTGGGT- 3' Pcgf2 mmu-miR-877 beg:17 end:36 pic:3' GGGACG-CGGTAGAGGAGATG 5'& || || |||||||..|| &5' -CC-GCAGCCATCTTTTC--- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-133a 1 13 UGUCGACCAACUUCCCCUGGUU ||| |||||| ---------GGAAAGGGACCC- Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-133b 1 13 AUCGACCAACUUCCCCUGGUU ||| |||||| --------GGAAAGGGACCC- Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-184 8 42 -UGGGAAUA------GUC-----AAGAGGCAGGU ||||| ||| ||:||| ||| GACCCUCUCCUUCCGCAGCCAUCUUUUCCCUCCU Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-224 53 81 AUUUGCCUU--------GGUGAUCACUGAAU :||: ||||| |||||| ---CUGGGCCCCCUUUUCCACUUUUGACUUU Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-298 1 29 CCU--UCUUGUCGGGAGGAGA----CGG- ||| :|:|| |:|||||: ||| GGAAAGGGACC-CUCUCCUUCCGCAGCCA Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-320 7 28 AAGC-GGGAGAGUU-GG-GUCGAAAA | ||||||| || |||| --GGACCCUCUCCUUCCGCAGCC--- Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-324-5p 67 115 -GUGGUUAC------------GGGA-----------UC-CCCUACGC |||: || :||| || |||| |:| CCACUUUUGACUUUCCCUGGUUCCUCCCAUUUUCAGAGUGGGAGGUGG Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-342 103 121 -CUGC--CCACGCUAAAGACACACUCU | | |||| |:|||: AGUGGGAGGUG-GGUUUUA-------- Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-546 17 32 CUGAGGCA-CGGUGGUA :|||| ||||:| -CUUCCGCAGCCAUCU- Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-652 5 31 ACGUGUUGGGAUCAC----CG-CGGUAA : :||||| || ||||| --AGGGACCCUCUCCUUCCGCAGCCAUC Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-665 3 34 AUUCCCUGGA----------GUCGG-AGGACCA |||||||| ||||| ||:| AAAGGGACCCUCUCCUUCCGCAGCCAUCUUU-- Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-667 104 122 GAACCCGACCCACCGUCCACAGU- |||| ||::||| |:| ------GUGGGAGGUGGGUUUUAU Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-671 16 70 -GGAGG--UCG--------GGGAGGU-------------CCCG------AAGGA |:||| ||| |||||| |||| |||| CCUUCCGCAGCCAUCUUUUCCCUCCUUUUUACUUUUUCUGGGCCCCCUUUUCCA Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-674* 97 115 AACAAGACUCUACCCUCGACAC ||| ||| |||||| || --UUUCAGAG-UGGGAGGUGG- Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-675-5p 5 30 UGACACCC-GGGA----AAGGCGU-GGU- ||| |||| ||||||| ||| ----AGGGACCCUCUCCUUCCGCAGCCAU Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-685 10 31 CACGGAGUGGA----GUCGGUAACU |||| ||| ||||||| --CCCUCUCCUUCCGCAGCCAUC-- Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-694 78 104 GAAGU--CCGUU----GUAAAAGUC- ||| ||: ||||||||| UUUCCCUGGUUCCUCCCAUUUUCAGA Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-702 101 118 -CUCGCCCCAUUUCCCACCCGU |||:||| ||||||: AGAGUGGGA-----GGUGGGUU Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-705 56 99 ACGGG---------------UG---GGGU----GGAGGGUGG |||| || ||| |||||||:: GGCCCCCUUUUCCACUUUUGACUUUCCCUGGUUCCUCCCAUUU Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-709 16 42 AGGAGGA--CGG-AGAC---GGAGG- |:||| ||| ||| ||||| CCUUCCGCAGCCAUCUUUUCCCUCCU Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-711 71 96 GAAUGUAGAGAGGGGCCC---AGGG- || | ||:||||:|| |||| UUUUGA-CUUUCCCUGGUUCCUCCCA Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-721 57 73 AAGGGGGAAAAUUAACGUGAC ||||||||| |||| -GCCCCCUUUUC----CACUU Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-770-3p 22 64 GGUCG-------AGGUGCAG---------------UCCGGGUGC |||| ||| | || :||||| | GCAGCCAUCUUUUCC-C-UCCUUUUUACUUUUUCUGGGCCCCCU Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-694 95 102 ------------------GAAGU--CCGUU----GUAAAAGUC :||| ||: ||||||||| CCCUUUUCCACUUUUGACUUUCCCUGGUUCCUCCCAUUUUCAGA Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-133a 1 13 ugucgaccaaCUUCCCCUGGuu ||| |||||| ---------gGAAAGGGACCct Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-133b 1 13 aucgaccaaCUUCCCCUGGuu ||| |||||| --------gGAAAGGGACCct Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-184 15 41 uGGGAAUAGUC-----AAGAGGCAGGu ||:| ||| ||:||| ||| tCCTTCCGCAGCCATCTTTTCCCTCCt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-224 58 80 auuugccuuGGUGAUCACUGAAu ||||| |||||| cccccttttCCACTTTTGACTTt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-320 12 34 aAGCGGGAGAGUUGGGUCGAAAA || ||:|| | ||| ||||| cTCTCCTTCCGCAGCCATCTTTT Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-324-5p 91 113 guGGUUACGGGAUC-CCCUACGC ||| | :| || |||| |:| tcCCATTTTCAGAGTGGGAGGTG Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-342 81 111 cuGCCC----ACGCU-AAAG--ACACACUCu | || | | | |||| ||| ||| ccCTGGTTCCTCCCATTTTCAGAGTGGGAGg Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-546 16 32 cugAGGC-ACGGUGGua |||| ||||:| cctTCCGCAGCCATCtt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-652 6 30 aCGUGUUGGGAUCA--CCG-CGGUAa | || |:|| | || ||||| gGGAC-CCTCTCCTTCCGCAGCCATc Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-667 94 116 gaacccGACCCACCGUCCACagu | | |||| ||||| cattttCAGAGTGGGAGGTGggt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-671 36 63 GGAGG----UCGGGGAGGUCCCGAAGGA ||||| |:::|:| |||| ||| CCTCCTTTTTACTTTTTCTGGGCCCCCT Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-671 69 91 gGAGGUCGGGGAGGUCCCGAAGGA ||:: | |::||| || ||||| aCTTTTGACTTTCCCTGG-TTCCT Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-674* 95 115 aACAAGACUCUACCCUCGACac | ||| ||| |||||| || aTTTTCAGAG-TGGGAGGTGgg Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-675-5p 1 28 ugacaCCC-GGGA----AAGGCGU-GGU ||| |||| ||||||| ||| ggaaaGGGACCCTCTCCTTCCGCAGCCA Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-685 8 32 cacGGAGUGGA----GUCGGUAacu |||| ||| ||||||| gacCCTCTCCTTCCGCAGCCATctt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-702 102 117 CUCGCCCCAUUUCCCACCCgu |||:||| | |||||| GAGTGGG----A-GGTGGGtt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-705 74 97 ACGGGUGGGG----UGGAGGGUgg || |: :||| ||||||| TGACTTTCCCTGGTTCCTCCCAtt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-705 52 71 acggguGGGGUGGAGGGUGg |||| ::|:|||| tctgggCCCCCTTTTCCACt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-709 12 31 agGAGGACGGAGACGG-AGg ||||| || | ||| || ctCTCCTTCCGCAGCCATCt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-711 70 91 GAAUGUAGAGAGGGGCCCAGGg ||| :: ||:||||:|| ||| CTTTTGACTTTCCCTGGTTCCt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-721 56 72 aaGGGGGAAAAUUAACGUGAc ||||||| || |||| ggCCCCCTT----TTCCACTt Pcgf2; Mel-18; Mel18; Rnf110; Zfp144; Znf144 mmu-miR-770-3p 35 63 GGUCGAGG-----UGCA----GUCCGGGUGc || |||| || | ::||||| | CC--CTCCTTTTTACTTTTTCTGGGCCCCCt

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Pcgf2 RAID00291537 mmu-miR-6929-5p miRNA MIMAT0027758 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID00365660 mmu-miR-211-5p miRNA MIMAT0000668 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID00526752 mmu-miR-466o-3p miRNA MIMAT0014886 Pcgf2 mRNA 22658 CLIP-seq 0.5483 Pcgf2 RAID00639060 mmu-miR-7008-3p miRNA MIMAT0027921 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID00943755 mmu-miR-691 miRNA MIMAT0003470 Pcgf2 mRNA 22658 CLIP-seq 0.5483 Pcgf2 RAID01000361 mmu-miR-133c miRNA MIMAT0025078 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID01058805 mmu-miR-6344 miRNA MIMAT0025087 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID01069466 mmu-miR-669c-3p miRNA MIMAT0017253 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID01122316 mmu-miR-135b-5p miRNA MIMAT0000612 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID01215323 mmu-miR-7053-3p miRNA MIMAT0028011 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID01254882 mmu-miR-466f-3p miRNA MIMAT0004882 Pcgf2 mRNA 22658 CLIP-seq 0.5483 Pcgf2 RAID01343408 mmu-miR-7002-3p miRNA MIMAT0027907 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID01372427 mmu-miR-493-5p miRNA MIMAT0017276 Pcgf2 mRNA 22658 Prediction 0.2202 Pcgf2 RAID01518314 mmu-miR-3074-5p miRNA MIMAT0014856 Pcgf2 mRNA 22658 CLIP-seq 0.5483 Pcgf2 RAID01635078 mmu-miR-1968-3p miRNA MIMAT0017350 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID01647116 mmu-miR-7651-5p miRNA MIMAT0029804 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID01826890 mmu-miR-202-5p miRNA MIMAT0004546 Pcgf2 mRNA 22658 Prediction 0.2202 Pcgf2 RAID01976589 mmu-miR-340-5p miRNA MIMAT0004651 Pcgf2 mRNA 22658 Prediction 0.2202 Pcgf2 RAID02028924 mmu-miR-204-5p miRNA MIMAT0000237 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID02088677 mmu-miR-384-3p miRNA MIMAT0001076 Pcgf2 mRNA 22658 Prediction 0.2202 Pcgf2 RAID02134344 mmu-miR-1953 miRNA MIMAT0009424 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID02169556 mmu-miR-448-3p miRNA MIMAT0001533 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID02188650 mmu-miR-362-3p miRNA MIMAT0004684 Pcgf2 mRNA 22658 CLIP-seq 0.5483 Pcgf2 RAID02443039 mmu-miR-135a-5p miRNA MIMAT0000147 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID02654821 mmu-miR-7065-3p miRNA MIMAT0028035 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID02674689 mmu-miR-181d-5p miRNA MIMAT0004324 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID02758433 mmu-miR-7226-5p miRNA MIMAT0028420 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID03018914 mmu-miR-124-3p miRNA MIMAT0000134 Pcgf2 mRNA 22658 Prediction 0.2202 Pcgf2 RAID03032578 mmu-miR-133a-3p miRNA MIMAT0000145 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID03044097 mmu-miR-7050-5p miRNA MIMAT0028004 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID03045807 mmu-miR-1249-5p miRNA MIMAT0014804 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID03053011 mmu-miR-329-3p miRNA MIMAT0000567 Pcgf2 mRNA 22658 CLIP-seq 0.5483 Pcgf2 RAID03128341 mmu-miR-3112-5p miRNA MIMAT0014955 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID03335759 mmu-miR-466i-3p miRNA MIMAT0005834 Pcgf2 mRNA 22658 CLIP-seq 0.5483 Pcgf2 RAID03381557 mmu-miR-466m-3p miRNA MIMAT0014883 Pcgf2 mRNA 22658 CLIP-seq 0.5483 Pcgf2 RAID03465525 mmu-miR-3104-5p miRNA MIMAT0014939 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID03603834 mmu-miR-133b-3p miRNA MIMAT0000769 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID03889292 mmu-miR-532-3p miRNA MIMAT0004781 Pcgf2 mRNA 22658 Prediction 0.1828 Pcgf2 RAID03896055 mmu-miR-5134-5p miRNA MIMAT0020645 Pcgf2 mRNA 22658 Prediction 0.1828