DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Traf3ip2 | mmu-miR-501-5p | beg:404 | end:424 | pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& |.| |||||||| &5' -----CTCTGTATAAAAGGATT 3' |
Traf3ip2 | mghv-miR-M1-9 | beg:380 | end:400 | pic:3' TTTTTCCAG-GTCCGTTTACACT 5'& || .|| .|||||||| &5' ------GTAGTAGATAAATGTGA 3' |
Traf3ip2 | mmu-miR-127star | beg:130 | end:150 | pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& |.||. | ||||||||| &5' ----GGGCTTCCAGAGCTTCAG 3' |
Traf3ip2 | mmu-miR-18astar | beg:333 | end:351 | pic:3' GTCTTCCTCGTGAA---TCCCGTCA 5'& .||| ||||||| &5' ---------TACTGAAAAGGGCAG- 3' |
Traf3ip2 | mmu-miR-146a | beg:391 | end:410 | pic:3' TTGGGTAC-CTTAAGTCAAGAGT 5'& ||| || ||||||| &5' -----ATGTGACAA-AGTTCTC- 3' |
Traf3ip2 | mmu-miR-146b | beg:391 | end:410 | pic:3' TCGGATAC-CTTAAGTCAAGAGT 5'& ||| || ||||||| &5' -----ATGTGACAA-AGTTCTC- 3' |
Traf3ip2 | mmu-miR-448 | beg:624 | end:643 | pic:3' TACCCTGTAGGATG-TATACGTT 5'& .|||. ||||||| &5' ------TATCTGAGAATATGCA- 3' |
Traf3ip2 | mmu-miR-103 | beg:145 | end:164 | pic:3' AGTATCGGGACATGTTACGACGA 5'& ||| |||. .||||||| &5' TCAGTGCCTG----GATGCTGC- 3' |
Traf3ip2 | mmu-miR-107 | beg:145 | end:164 | pic:3' ACTATCG-GGACATGTTACGACGA 5'& ||. |||| .||||||| &5' ----AGTGCCTG---GATGCTGC- 3' |
Traf3ip2 | mmu-miR-1983 | beg:154 | end:170 | pic:3' TCTTTTGTACGAGGTCCACTC 5'& ||||| ||||||| &5' -------ATGCTGCAGGTGA- 3' |
Traf3ip2 | mmu-miR-22 | beg:335 | end:353 | pic:3' TGTCAAGAAGTTGACCGTCGAA 5'& || || ||||||| &5' ------CTGAAAAGGGCAGCT- 3' |
Traf3ip2 | mmu-miR-702 | beg:310 | end:326 | pic:3' CTCGCCCCATTTCCCACCCGT 5'& ||..| |||||||| &5' -------GTGGA-GGTGGGCA 3' |
Traf3ip2 | mcmv-miR-M44-1 | beg:404 | end:423 | pic:3' TGGCGCCGAGACC--TTTTTCTAT 5'& ||||| ||||.||| &5' -------CTCTGTATAAAAGGAT- 3' |
Traf3ip2 | mcmv-miR-m88-1 | beg:69 | end:93 | pic:3' TCTGGGGC--TGTAGCTGAAGAC 5'& ||.|||.| ||| | ||||| &5' AGGCCCTGGAACA-CCTCTTCT- 3' |
Traf3ip2 | mcmv-miR-M95-1-5p | beg:160 | end:191 | pic:3' GTTCGCTG----TGTTC--GGGTGCTGG 5'& ||.|.||| |||| .|.|.|||| &5' CAGGTGACAGAAACAAACATCTATGACC 3' |
Traf3ip2 | mghv-miR-M1-8 | beg:693 | end:711 | pic:3' CTGGTTTGGG-GGTCACTCACGA 5'& ||| |. ||||||. &5' -------CCCACTCCTGAGTGT- 3' |
Traf3ip2 | mmu-miR-1186 | beg:23 | end:45 | pic:3' GTACGGAAATTAAG-GTCGTGAG 5'& |||| || |||||.|| &5' ---GCCTGTTC-TCACAGCATTC 3' |
Traf3ip2 | mmu-miR-1197 | beg:225 | end:247 | pic:3' TCTTCA-TC--TGGTACACAGGAT 5'& .|| || .|. |||||||| &5' ---GGTCAGATGCTCTGTGTCCT- 3' |
Traf3ip2 | mmu-miR-122 | beg:0 | end:15 | pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& |. || | ||||||| &5' -------CGATGGC-CACTCCA 3' |
Traf3ip2 | mmu-miR-122 | beg:198 | end:212 | pic:3' GTTTGTGGTAACAGT-GTGAGGT 5'& ||| ||||.|| &5' ------------TCATCACTTCA 3' |
Traf3ip2 | mmu-miR-129-5p | beg:179 | end:198 | pic:3' CGTTCGGGT-CTGGCGTTTTTC 5'& .|.| |||| |||||| &5' -----TCTATGACCACAAAAA- 3' |
Traf3ip2 | mmu-miR-139-3p | beg:90 | end:111 | pic:3' GAGGTTGTCCCGGC--GCAGAGGT 5'& |. |||| |.| .|||||| &5' --CT-ACAGAGTCCTCTGTCTCC- 3' |
Traf3ip2 | mmu-miR-146b | beg:668 | end:687 | pic:3' TCGGATACCTTAAGTCAAGAGT 5'& .||||| .||||.|| &5' ---TTATGGTC--TAGTTTTC- 3' |
Traf3ip2 | mmu-miR-150 | beg:740 | end:756 | pic:3' GTGACCATGTTCCC--AACCCTCT 5'& ||| |||||||| &5' -----------GGGATTTGGGAGA 3' |
Traf3ip2 | mmu-miR-17star | beg:145 | end:166 | pic:3' GATGTTCACGGGA--GTGACGTCA 5'& ||||||. ..|||||| &5' -----AGTGCCTGGATGCTGCAG- 3' |
Traf3ip2 | mmu-miR-1839-5p | beg:672 | end:692 | pic:3' GTTCTGGA-CAAGATAGATGGAA 5'& | || |||. ||||.|| &5' ---GGTCTAGTTT--TCTATCT- 3' |
Traf3ip2 | mmu-miR-184 | beg:674 | end:698 | pic:3' TGGGAATAG-TCA------AGAGGCAGGT 5'& .|| ||| ||||.|||| &5' ------GTCTAGTTTTCTATCTCTGTCC- 3' |
Traf3ip2 | mmu-miR-186 | beg:273 | end:294 | pic:3' TCGGGTTTTCCTCTTAAGAAAC 5'& .|||| || |||||||| &5' ----TAAAATGATTATTCTTTG 3' |
Traf3ip2 | mmu-miR-1902 | beg:695 | end:717 | pic:3' TTCAGTACGGATG-ACGTGGAGA 5'& || |||. ||.|||||| &5' ----CACTCCTGAGTGTACCTCT 3' |
Traf3ip2 | mmu-miR-1905 | beg:47 | end:66 | pic:3' GATGGCGCACCACCCTGACCAC 5'& ||| | |.|||||| &5' -----GCGGAGCT-GGCTGGTG 3' |
Traf3ip2 | mmu-miR-191star | beg:515 | end:534 | pic:3' CCCTTGCTTTAGGTTCACGTCG 5'& | .| . ||||.||| &5' --GGGTGGGG----AGTGTAGC 3' |
Traf3ip2 | mmu-miR-1928 | beg:516 | end:535 | pic:3' CTCGACCGTTACATCGA 5'& |.|. || |.||||||| &5' GGGTGGGGAGTGTAGCT 3' |
Traf3ip2 | mmu-miR-1928 | beg:50 | end:68 | pic:3' CTCGACCGTTACATCGA 5'& |||||||| ||.|| &5' GAGCTGGCTG-GTGGC- 3' |
Traf3ip2 | mmu-miR-1930 | beg:299 | end:321 | pic:3' TGCGACGTCCAT-GATACCTCCA 5'& ||. | .||||||| &5' ----TGTTTATCTCAGTGGAGGT 3' |
Traf3ip2 | mmu-miR-1933-5p | beg:173 | end:190 | pic:3' TTTGATTCTGGCTTGT-GGTACTGA 5'& | |||| |.||||| &5' ----------CAAACATCTATGAC- 3' |
Traf3ip2 | mmu-miR-1937a | beg:342 | end:360 | pic:3' ACCCCCGAGC-AGGCCCTAA 5'& |||| | ||.||||| &5' ---GGGCA-GCTCTGGGAT- 3' |
Traf3ip2 | mmu-miR-1937a | beg:732 | end:749 | pic:3' ACCCCCGAGCAGGCCCTAA 5'& |||. ||.|||||| &5' -----GCTTTTCTGGGATT 3' |
Traf3ip2 | mmu-miR-1937c | beg:342 | end:360 | pic:3' ACCCCCGAGAAGGCCCTA 5'& |||| ||.||||| &5' ---GGGCAGCTCTGGGAT 3' |
Traf3ip2 | mmu-miR-1937c | beg:732 | end:748 | pic:3' ACCCCCGAGAAGGCCCTA 5'& |||.|||.||||| &5' -----GCTTTTCTGGGAT 3' |
Traf3ip2 | mmu-miR-1953 | beg:449 | end:468 | pic:3' GTCTTCGGACTC-TTGAAAGGGT 5'& | ||| ..|||||.| &5' ------CGTGAAAGGCTTTCTC- 3' |
Traf3ip2 | mmu-miR-1955 | beg:342 | end:360 | pic:3' TTTTCGACGTCACGTA-GGACCCTGA 5'& || ||| .||||||. &5' ---------AGGGCAGCTCTGGGAT- 3' |
Traf3ip2 | mmu-miR-1955 | beg:731 | end:749 | pic:3' TTTTCGACGTCACGT-AGGACCCTGA 5'& ||| |.||||||.| &5' -----------TGCTTTTCTGGGATT 3' |
Traf3ip2 | mmu-miR-1956 | beg:140 | end:159 | pic:3' AGGCGACTGAGTCG-GGACCTGA 5'& ||| ||||. ||||||. &5' ---GCT---TCAGTGCCTGGAT- 3' |
Traf3ip2 | mmu-miR-1957 | beg:724 | end:744 | pic:3' CAGTAT-ACGAGATGGTGAC 5'& ||||| ||||.| ||| &5' GTCATTTTGCTTTT---CTG 3' |
Traf3ip2 | mmu-miR-1961 | beg:674 | end:693 | pic:3' AAGATTGAT-GATGGAGT 5'& |||| | |||.||| &5' -TCTAGTTTTCTATCTC- 3' |
Traf3ip2 | mmu-miR-1962 | beg:12 | end:30 | pic:3' TACACAGGGTCACGGTCGGAGA 5'& | |.|||||||||||| &5' ----G-CTCAGTGCCAGCCT-- 3' |
Traf3ip2 | mmu-miR-1969 | beg:668 | end:692 | pic:3' TGGGTACAATTTC-AGAGGTAGAA 5'& ..||| || |.||.|||| &5' --TTATGGTCTAGTTTTCTATCT- 3' |
Traf3ip2 | mmu-miR-1971 | beg:13 | end:30 | pic:3' AGAGTCG-GGTCGGAAATG 5'& |||||. ||||||| &5' -CTCAGTGCCAGCCT---- 3' |
Traf3ip2 | mmu-miR-19astar | beg:608 | end:629 | pic:3' CATCACGTT-GATACGTTTTGAT 5'& || .||||.||||||| &5' -----GCCATTTATGTAAAACTA 3' |
Traf3ip2 | mmu-miR-20bstar | beg:145 | end:166 | pic:3' GATCTTCACGAG--TGTGACGTCA 5'& ||||| |..|||||| &5' -----AGTGCCTGGATGCTGCAG- 3' |
Traf3ip2 | mmu-miR-2141 | beg:74 | end:91 | pic:3' TTGAAAAGAC--TGTGGAGGA 5'& ||| |||||||.| &5' -------CTGGAACACCTCTT 3' |
Traf3ip2 | mmu-miR-216a | beg:730 | end:749 | pic:3' AGTGTCAACGGTC-GACTCTAAT 5'& ||||. |||.|||| &5' ------TTGCTTTTCTGGGATT- 3' |
Traf3ip2 | mmu-miR-23b | beg:380 | end:400 | pic:3' CCATTAGGGACCGTTACACTA 5'& |||.| ||||||| &5' -GTAGTAGATA--AATGTGA- 3' |
Traf3ip2 | mmu-miR-2861 | beg:57 | end:79 | pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.| . || ||||||||. &5' CTGGTGGCACCCAGGCCCT 3' |
Traf3ip2 | mmu-miR-298 | beg:90 | end:108 | pic:3' CCCTTCTTGTCGGGAGGAGACGG 5'& |||| |||||||.| &5' -------ACAGAG-TCCTCTGTC 3' |
Traf3ip2 | mmu-miR-29astar | beg:631 | end:654 | pic:3' GACTTGTG-GT-TTTCTTTAGTCA 5'& |||.|. || ||||.|| ||| &5' --GAATATGCATAAAGGAA-CAG- 3' |
Traf3ip2 | mmu-miR-302bstar | beg:452 | end:480 | pic:3' TCTTT-CGTAAGGGTA---CAATTTCA 5'& |||| || |||.| |||.|.| &5' -GAAAGGCTTTCTCTTGCAGTTGAGG- 3' |
Traf3ip2 | mmu-miR-30astar | beg:616 | end:636 | pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||.||| |. ||||.| &5' --TGTAAAA--CTATCTGAGA- 3' |
Traf3ip2 | mmu-miR-30estar | beg:616 | end:636 | pic:3' CGACATTTGTAGGCTGACTTTC 5'& |||||| |. ||||.| &5' --TGTAAAA--CTATCTGAGA- 3' |
Traf3ip2 | mmu-miR-327 | beg:95 | end:116 | pic:3' TAGGAGTACGGGGAGTTCA 5'& .||||| ||.|.| .||| &5' GTCCTC-TGTCTCCTGAGT 3' |
Traf3ip2 | mmu-miR-337-3p | beg:49 | end:60 | pic:3' TCCGTAGTATATCCTCGACTT 5'& |||||||. &5' ------------GGAGCTGG- 3' |
Traf3ip2 | mmu-miR-376c | beg:226 | end:245 | pic:3' TGCACTTTAAAGGAGATACAA 5'& || |.|| ||||.||| &5' --GTCAGATG--CTCTGTGT- 3' |
Traf3ip2 | mmu-miR-412 | beg:146 | end:170 | pic:3' GC-CGATCACCTG----GTCCACTT 5'& | || ||||. ||||||| &5' -GTGCC--TGGATGCTGCAGGTGA- 3' |
Traf3ip2 | mmu-miR-452 | beg:492 | end:510 | pic:3' CAGAGTCAAAGGAG--ACGTTTGT 5'& |||| ||.||||| &5' ---------TCCTAATTGTAAACA 3' |
Traf3ip2 | mmu-miR-465b-5p | beg:244 | end:262 | pic:3' GTCTAGTCGTGGTAAGATTTAT 5'& |.|| |||| ||||||| &5' ----TTAG-ACCAGTCTAAAT- 3' |
Traf3ip2 | mmu-miR-465c-5p | beg:244 | end:262 | pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& |.|| ||| ||||||| &5' ----TTAGA-CCAGTCTAAAT- 3' |
Traf3ip2 | mmu-miR-470 | beg:551 | end:574 | pic:3' TGAGTGGTCACGG--TCAGGTTCTT 5'& ||.| || ||. ||||||.|| &5' -CTTAGCA-TGTAGGAGTCCAGGA- 3' |
Traf3ip2 | mmu-miR-484 | beg:512 | end:535 | pic:3' TAGCCCTCCCCTGAC-TCGGACT 5'& ||.||| ||||| || |||. &5' ATTGGGTGGGGAGTGTAGCT--- 3' |
Traf3ip2 | mmu-miR-484 | beg:107 | end:120 | pic:3' TAGCCCTCCCCTGACTCGGACT 5'& |||||.|||| &5' ------------CTGAGTCTGA 3' |
Traf3ip2 | mmu-miR-488 | beg:430 | end:452 | pic:3' CTGGTTCTT--TGTCGGAAAGTT 5'& ||| ||| |||||.|| &5' ----AAGTTATACATCCTTTTAA 3' |
Traf3ip2 | mmu-miR-540-3p | beg:699 | end:721 | pic:3' GGTCCTAGC-TGGAGACTGGA 5'& || || .| |||||||||. &5' CCT-GAGTGTACCTCTGACT- 3' |
Traf3ip2 | mmu-miR-668 | beg:152 | end:172 | pic:3' CCATCACCCGGCTCGGC--TCACTGT 5'& || ||.| .|||||| &5' -------GGAT--GCTGCAGGTGACA 3' |
Traf3ip2 | mmu-miR-671-5p | beg:116 | end:140 | pic:3' GAGGTCG--GGGAG-GTCCCGAAGGA 5'& . ||. .|||| | |||||||| &5' --TGAGTTGTCCTCGCTGGGCTTCC- 3' |
Traf3ip2 | mmu-miR-673-3p | beg:59 | end:82 | pic:3' CCA-CGTGTCTTGAGTCGGGGCCT 5'& ||| |||| .||||.||| &5' GGTGGCACCCA----GGCCCTGGA 3' |
Traf3ip2 | mmu-miR-673-3p | beg:333 | end:358 | pic:3' CCACGTGTCTTGA---GTCGGGGCCT 5'& .|| ||| ||||.|.||. &5' ----TACTGAAAAGGGCAGCTCTGGG 3' |
Traf3ip2 | mmu-miR-674 | beg:3 | end:24 | pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& .||||||| |||||||| &5' ---GCCACTCCAG-CTCAGTGC 3' |
Traf3ip2 | mmu-miR-674 | beg:301 | end:316 | pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& ...||||||||| &5' ---------TTTATCTCAGTG- 3' |
Traf3ip2 | mmu-miR-674star | beg:644 | end:662 | pic:3' AACAAGACTCTAC-CCTCGACAC 5'& .|| ||.|||||| &5' --------GGAACAGGGGCTGTG 3' |
Traf3ip2 | mmu-miR-679 | beg:715 | end:742 | pic:3' TGGTTC--TCAGTGGAGTGTCAGG 5'& ||.||| |||||..| | |.| &5' ACTAAGCAAGTCATTTTGCTTTTC 3' |
Traf3ip2 | mmu-miR-680 | beg:222 | end:240 | pic:3' GGGGGTACAGTC-GTCTACGGG 5'& |||.| |||||||.| &5' -------GTCGGTCAGATGCTC 3' |
Traf3ip2 | mmu-miR-681 | beg:462 | end:482 | pic:3' TCGACGGACGGTC-GCTCCGAC 5'& || |.|| ||| .|||||| &5' --CT-CTTG-CAGTTGAGGCT- 3' |
Traf3ip2 | mmu-miR-692 | beg:590 | end:601 | pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |.|||||| &5' ------------CGAAGAGA- 3' |
Traf3ip2 | mmu-miR-708star | beg:665 | end:684 | pic:3' GATCTTCGAGTGTCAGATCAAC 5'& |||. |.|..|||||||| &5' --AGAG--TTATGGTCTAGTT- 3' |
Traf3ip2 | mmu-miR-713 | beg:12 | end:24 | pic:3' CGACACACGGAAGTCACGT 5'& || ||||||| &5' -------GC--TCAGTGC- 3' |
Traf3ip2 | mmu-miR-762 | beg:7 | end:30 | pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& ||| |.| |. ||||||. &5' -CTCCAGCTCAGTGCCAGCCT- 3' |
Traf3ip2 | mmu-miR-7a | beg:675 | end:689 | pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& |||||.|||.| &5' ------------CTAGTTTTCTA 3' |
Traf3ip2 | mmu-miR-7b | beg:31 | end:50 | pic:3' TGTTGTTTTAGTGTTC--AGAAGGT 5'& |||||. |||||.| &5' ---------TCACAGCATTCTTCTA 3' |
Traf3ip2 | mmu-miR-877 | beg:72 | end:95 | pic:3' GGGACGCGGTAGAGGAGATG 5'& ||||| || |||.||||| &5' CCCTGGAACACCTCTTCTAC 3' |
Traf3ip2 | mmu-miR-877 | beg:13 | end:38 | pic:3' GGGACGCGGTA-GAGGAGA-TG 5'& |.| |.|||| || .||| || &5' CTCAGTGCCAGCCTGTTCTCAC 3' |
Traf3ip2 | mmu-miR-883a-3p | beg:456 | end:477 | pic:3' TATGACTCTCGAC----AACGTCAAT 5'& .||| ||||||||. &5' --------GGCTTTCTCTTGCAGTTG 3' |
Traf3ip2 | mmu-miR-883b-3p | beg:465 | end:477 | pic:3' TATGACTCTCTACAACGTCAAT 5'& ||||||||. &5' -------------TTGCAGTTG 3' |
Traf3ip2 | mmu-miR-92astar | beg:569 | end:587 | pic:3' CATTACGGTGGTTAGGGGTGGA 5'& | .||| |||||.| &5' -----GAT-TCAACCCCCATC- 3' |
Traf3ip2 | mmu-miR-96 | beg:12 | end:26 | pic:3' TCGTTTTTACACGA-TCACGGTTT 5'& ||| |||||||. &5' -----------GCTCAGTGCCAG- 3' |
Traf3ip2 | mmu-miR-669h-3p | beg:631 | end:645 | pic:3' ACACGTACACACATATACGTAT 5'& | ||||||||| &5' -----------GAATATGCATA 3' |
Traf3ip2 | mmu-miR-669k | beg:631 | end:645 | pic:3' AACGTACGCACATATACGTAT 5'& | ||||||||| &5' ----------GAATATGCATA 3' |