| DNA & RNA Element - microRNA | | Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
|---|
| MIMAT0004882 | mmu-miR-466f-3p | 78294 | Rps27a | cacacauacacacACACAUAc | ||||||| | ------------uUGUGUAUg | 2 | 9 | 1 | 9 | [mm9:11:29445871-29445879:-] | 0.5251 | 140 | 7 | -10.37 | -0.4290 | | MIMAT0005856 | mmu-miR-1195 | 78294 | Rps27a | acucguccgaccggagCUUGAGu | |||||| | cguuaauaaaaagaagGAACUCg | 2 | 8 | 10 | 32 | [mm9:11:29445848-29445870:-] | 0.4968 | 120 | 6 | -13.19 | -0.1495 | |
| DNA & RNA Element - TRANSFAC | | Accession | AS | Description | Species | Entrez | Pubmed | Binding Info |
|---|
| G039923 | | Rps27a | Mus musculus | 78294 | | | |
| DNA & RNA Element - RepTar | | Gene Name | miRNA | Begin | End | Profile |
|---|
| Rps27a | mmu-miR-568 | beg:0 | end:18 | pic:3' CACACATATGTAAATATGTA 5'& |||||||.|.|| ||| &5' -TGTGTATGCGTTAATA--- 3' | | Rps27a | mmu-miR-669h-3p | beg:0 | end:13 | pic:3' ACACGTACACACATATACGTAT 5'& |||.|||||.| &5' ----------TGTGTATGCGT- 3' | | Rps27a | mmu-miR-669j | beg:0 | end:11 | pic:3' ACAAACGTACACTCATATACGT 5'& ||.||||| &5' -------------GTGTATGC- 3' | | Rps27a | mmu-miR-669k | beg:0 | end:13 | pic:3' AACGTACGCACATATACGTAT 5'& |||.|||||.| &5' ---------TGTGTATGCGT- 3' | |