SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs6186091 | snp | A/G | 0.375 | 0.216506 | intron-variant | Cfap52 | GRCm38.p3 | 11:67942353 | TATTTTTAGCTCTGC[A/G]ATCCAGTATGAGTTC | 71860 |
rs6186143 | snp | A/G/T | 0.336735 | 0.234472 | intron-variant | Cfap52 | Mm_Celera | 11:67942395 | GTTAAGGTTGGTGTC[A/G/T]GGATCACTGTGAGGG | 71860 |
rs6186204 | snp | G/T | 0.5 | 0 | intron-variant | Cfap52 | Mm_Celera | 11:67942430 | GGTTTGGGGTACATG[G/T]GTTGAAcatataggt | 71860 |
rs6186642 | snp | C/T | 0.5 | 0 | intron-variant | Cfap52 | Mm_Celera | 11:67942447 | TTGAAcatataggtg[C/T]ccacttgtaccagca | 71860 |
rs6186749 | snp | C/T | 0.5 | 0 | intron-variant | Cfap52 | Mm_Celera | 11:67942508 | ggtcgtcttggctcc[C/T]ctgtcagtgttaaga | 71860 |
rs6199546 | snp | A/C | 0.5 | 0 | intron-variant | Cfap52 | Mm_Celera | 11:67949213 | agaaccgactccaga[A/C]agttgtcctttgacc | 71860 |
rs6199977 | snp | C/G | 0.5 | 0 | intron-variant | Cfap52 | Mm_Celera | 11:67949250 | tgcttactgtggtgc[C/G]ttgcatggacagatg | 71860 |
rs6200028 | snp | A/G | 0.5 | 0 | intron-variant | Cfap52 | Mm_Celera | 11:67949274 | acagatgcgcacaGT[A/G]TGTAAATAAATGTAA | 71860 |
rs6200518 | snp | G/T | 0.5 | 0 | intron-variant | Cfap52 | Mm_Celera | 11:67949347 | TTTTCCTCAACAACA[G/T]TTTTCAAAGAAACAT | 71860 |
rs6350547 | snp | C/T | 0.5 | 0 | intron-variant | Cfap52 | Mm_Celera | 11:67942686 | gggctgctctggatc[C/T]nttgctgtttttttt | 71860 |
rs6350548 | snp | A/G | 0.5 | 0 | intron-variant | Cfap52 | GRCm38.p3 | 11:67942686 | ggctgctctggatcn[A/G]ttgctgttttttttt | 71860 |
rs13470525 | snp | A/G | | | intron-variant | Cfap52 | Mm_Celera | 11:67948844 | GTATGCTGAGGCACA[A/G]ATGCAGGTTCTGTTC | 71860 |
rs26936046 | snp | C/T | 0.46281 | 0.131194 | upstream-variant-2KB | Stx8, Cfap52 | GRCm38.p3 | 11:67966214 | GCCGGGGTTGACGCG[C/T]TTCCATTCCCTGGGA | 71860 |
rs26936047 | snp | C/T | 0.32 | 0.24 | upstream-variant-2KB, intron-variant | Stx8, Cfap52 | Mm_Celera | 11:67965482 | AGGTCAGCGTCTCAC[C/T]GTCCCTGAGGCATCA | 71860 |
rs26936048 | snp | A/G | 0.408163 | 0.193609 | upstream-variant-2KB, intron-variant | Stx8, Cfap52 | Mm_Celera | 11:67965153 | CATTTCTCTCTCAAT[A/G]TTTACCACGACAGTC | 71860 |
rs26936049 | snp | A/T | 0.21875 | 0.248039 | upstream-variant-2KB, intron-variant | Stx8, Cfap52 | Mm_Celera | 11:67965031 | GCACCGCATCCTTTC[A/T]ACGGTAAAGCTTTCA | 71860 |
rs26936050 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cfap52 | Mm_Celera | 11:67958980 | CTAAATGTGAAAAAC[A/G]GGATCTAATGTTTGC | 71860 |
rs26936051 | snp | C/T | 0.486111 | 0.0821678 | intron-variant | Cfap52 | GRCm38.p3 | 11:67957347 | GTAGGAATTACTTCA[C/T]AGGACTCCCATGTAG | 71860 |
rs26936052 | snp | C/G | 0.244898 | 0.249948 | intron-variant | Cfap52 | Mm_Celera | 11:67957198 | TCATGGTGTCGCTAT[C/G]GCTGGGACAGAAAAC | 71860 |
rs26936053 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Cfap52 | Mm_Celera | 11:67955916 | CAGAAGTGGGATTGC[C/T]GGGACCACATGGTAG | 71860 |
rs26936054 | snp | A/T | 0.48 | 0.0979796 | intron-variant | Cfap52 | GRCm38.p3 | 11:67954902 | TACTTACGTTAAACA[A/T]TTAAAGACAGAAATT | 71860 |
rs28201368 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Cfap52 | Mm_Celera | 11:67954490 | ATGTCTGGAAACCTC[A/G]TTTTGGACAGCAAAG | 71860 |
rs28201369 | snp | C/T | 0.46875 | 0.121031 | intron-variant | Cfap52 | GRCm38.p3 | 11:67952895 | GACAGCCAGGTAATG[C/T]CCATGTGGTCTCAGA | 71860 |
rs28201370 | snp | A/G | 0.429688 | 0.173817 | intron-variant | Cfap52 | GRCm38.p3 | 11:67952870 | TGCAGCTGGGCCTTG[A/G]CAGCAGGGAGACAGC | 71860 |
rs28201371 | snp | C/T | 0.484429 | 0.0868505 | intron-variant | Cfap52 | GRCm38.p3 | 11:67952846 | CCAGATCGATCAAAT[C/T]AGACTGTCTGCAGCT | 71860 |
rs28201372 | snp | A/G | 0.492188 | 0.0620098 | intron-variant | Cfap52 | GRCm38.p3 | 11:67952760 | TATTTTCATGCTTGA[A/G]GTCATGATGTCTTTG | 71860 |
rs28201373 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Cfap52 | Mm_Celera | 11:67952157 | CAAAAATCATGAAAA[C/T]GTTGGCAAATTTCTG | 71860 |
rs28201374 | snp | G/T | 0.18 | 0.24 | intron-variant | Cfap52 | Mm_Celera | 11:67951902 | CCCAGACAAGGCTCC[G/T]AGCAGAGAGTGGAGG | 71860 |
rs28201375 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Cfap52 | GRCm38.p3 | 11:67950886 | ATGAGACATTTTTGA[A/C]TTGTCAATCCTTTTT | 71860 |
rs28201376 | snp | A/G | 0.49827 | 0.0293608 | synonymous-codon, intron-variant | Cfap52 | GRCm38.p3 | 11:67949657 | CGCCGCGGGGCTGCC[A/G]CAAATGGCATCTCTC | 71860 |
rs28201377 | snp | C/G | 0.132653 | 0.220748 | intron-variant | Cfap52 | Mm_Celera | 11:67949443 | CAAAAATTACAAAGC[C/G]AGGGGTTCGTTCAGT | 71860 |
rs28201378 | snp | A/G | 0.497041 | 0.0383476 | intron-variant | Cfap52 | GRCm38.p3 | 11:67948921 | CAAGTCATGTCCTGT[A/G]GCTAATAGCTTAAAC | 71860 |
rs28201379 | snp | A/G | 0.473373 | 0.11227 | intron-variant | Cfap52 | GRCm38.p3 | 11:67948860 | ATGCAGGTTCTGTTC[A/G]GATGTTCAAGTCGCT | 71860 |
rs28201380 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Cfap52 | Mm_Celera | 11:67948823 | ATTGCCAGTTTCTAA[A/G]TTAATGTATGCTGAG | 71860 |
rs28201381 | snp | C/G | 0.142012 | 0.225474 | intron-variant | Cfap52 | Mm_Celera | 11:67948764 | GGGAAAGGACACTTT[C/G]ATGTCTGTTTCACCT | 71860 |
rs28201382 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Cfap52 | Mm_Celera | 11:67948679 | AGAGAAATCGCAAAG[A/G]TAGTTTCGCTGAACT | 71860 |
rs28201383 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Cfap52 | Mm_Celera | 11:67948627 | TCTGGCTGGGGAAGG[A/G]ACGAACAGTCTGTAC | 71860 |
rs28201384 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Cfap52 | Mm_Celera | 11:67948295 | GAGTTTGCACAAGCA[C/T]TGCCCACAGACATTA | 71860 |
rs28201385 | snp | C/T | 0.165289 | 0.235211 | intron-variant | Cfap52 | Mm_Celera | 11:67948045 | TGGCCCATGGCCATA[C/T]TGATAGGTATCATGT | 71860 |
rs28201386 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cfap52 | Mm_Celera | 11:67947690 | TAATATATGGCCGGT[A/G]CTTCACTACTATATG | 71860 |
rs28201387 | snp | C/T | 0.260355 | 0.249785 | intron-variant | Cfap52 | Mm_Celera | 11:67946082 | TTTGGTAATGAGTGG[C/T]GAAGGTGCCAGTGAA | 71860 |
rs28201388 | snp | G/T | 0.42 | 0.183303 | missense | Cfap52 | Mm_Celera | 11:67945465 | AAGCTGTCGTCGTCG[G/T]CCATCTAGGAGATCA | 71860 |
rs28201389 | snp | C/T | 0.142012 | 0.225474 | synonymous-codon | Cfap52 | Mm_Celera | 11:67945371 | GCTGAATTTGTCCTT[C/T]ACAGGCCCAGTATCT | 71860 |
rs28201390 | snp | A/G | 0.49827 | 0.0293608 | intron-variant | Cfap52 | GRCm38.p3 | 11:67945083 | CTTACAGATCGAAAC[A/G]TACACCTCTCACATA | 71860 |
rs28201391 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Cfap52 | Mm_Celera | 11:67944313 | AGTGAGAGCAGCCTT[C/T]GGAACTTTCTGGGCA | 71860 |
rs28201392 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Cfap52 | Mm_Celera | 11:67943698 | TGTAGGATTAACCAA[C/T]GGCCCTGAAATGATC | 71860 |
rs28201393 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Cfap52 | Mm_Celera | 11:67941409 | AAGGCATTCATTCCA[C/T]GGTGTCTGAGAAGAA | 71860 |
rs28201394 | snp | G/T | 0.486111 | 0.0821678 | intron-variant | Cfap52 | Mm_Celera | 11:67941373 | GTTTCTTTAAGCTGG[G/T]TTTTGCCTGTTCTGA | 71860 |
rs28201395 | snp | C/T | 0.336735 | 0.234472 | intron-variant | Cfap52 | Mm_Celera | 11:67940514 | CATAAAGGTTCTAAT[C/T]GAAAATGTGCATGAC | 71860 |
rs28201396 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Cfap52 | Mm_Celera | 11:67940474 | CAACTATATGGAGGA[A/G]TGATGGCCAGCTCAT | 71860 |
rs28201397 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Cfap52 | Mm_Celera | 11:67940404 | TCTGAGCTAAGGCAT[A/G]TGGTATACAACCTTA | 71860 |
rs28201398 | snp | C/G | 0.336735 | 0.234472 | intron-variant | Cfap52 | Mm_Celera | 11:67940371 | TGGGACAGTTCTTAC[C/G]ATTGGGTGATTATAT | 71860 |
rs28201399 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Cfap52 | Mm_Celera | 11:67939497 | GCTCTGTCATTCCAG[C/T]TATGTACACACTTAG | 71860 |
rs28201400 | snp | A/C | 0.277778 | 0.248452 | intron-variant | Cfap52 | Mm_Celera | 11:67939409 | TGTACTTATTTATCA[A/C]AAGGGCAGTGTGCCT | 71860 |
rs28201401 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Cfap52 | Mm_Celera | 11:67939118 | ACAAAAGTGAAGCAG[A/G]GTCATTCAACCAGCA | 71860 |
rs28201402 | snp | A/G | 0.297521 | 0.245442 | synonymous-codon | Cfap52 | Mm_Celera | 11:67938931 | CAATGGAAAGACAAT[A/G]TCCTGGACAGCTTCA | 71860 |
rs28201403 | snp | A/T | 0.35503 | 0.226867 | intron-variant | Cfap52 | Mm_Celera | 11:67938180 | AAACAAAATTCAGCC[A/T]GAGAAGAGGTAGTTC | 71860 |
rs28201404 | snp | A/G | 0.426035 | 0.177515 | intron-variant | Cfap52 | Mm_Celera | 11:67937994 | AGGCTGCTAGATCAG[A/G]GAAACTCAGGGACAC | 71860 |
rs28201405 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cfap52 | Mm_Celera | 11:67937497 | TTCTGAAACAGGCTC[A/G]CATCTGAGGAACAAC | 71860 |
rs28201406 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Cfap52 | Mm_Celera | 11:67936694 | ATAAGTGTAGTCTGG[A/G]AAAGCTGACCTTTAA | 71860 |
rs28201407 | snp | A/G | 0.35503 | 0.226867 | intron-variant | Cfap52 | Mm_Celera | 11:67936570 | ATTAATTGGTCAGTC[A/G]GGCCACTTGTAAATG | 71860 |
rs29390955 | snp | A/T | 0.375 | 0.216506 | intron-variant | Cfap52 | GRCm38.p3 | 11:67954991 | TGATGGGCACCTTTT[A/T]AAAAGGCTGAATTAC | 71860 |
rs29393014 | snp | G/T | 0.32 | 0.24 | intron-variant | Cfap52 | GRCm38.p3 | 11:67956724 | AGAAACAGAGAGTAG[G/T]ATAGCGCTTGCCAGG | 71860 |
rs29393528 | snp | A/T | 0.32 | 0.24 | intron-variant | Cfap52 | Mm_Celera | 11:67927833 | TAATTTAAAAAAAAA[A/T]TTTTTTAATAGACTC | 71860 |
rs29397856 | snp | C/T | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Stx8, Cfap52 | Mm_Celera | 11:67967750 | AGCCCGGTTGTAGAA[C/T]GATTGTTTAGCACAC | 71860 |
rs29403139 | snp | C/T | 0.444444 | 0.157135 | upstream-variant-2KB, utr-variant-5-prime | Stx8, Cfap52 | Mm_Celera | 11:67965771 | TAGTATGTATTTTAT[C/T]CATTCTGGAAATGTA | 71860 |
rs29403690 | snp | A/G | 0.375 | 0.216506 | intron-variant | Cfap52 | GRCm38.p3 | 11:67961926 | GGACTTTTAAACAGT[A/G]TTGAGACTGTGAACG | 71860 |
rs29412524 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Cfap52 | GRCm38.p3 | 11:67953055 | GAAGACATGTAAGTA[G/T]CTGGGTGGTGGCAGG | 71860 |
rs29414423 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Cfap52 | GRCm38.p3 | 11:67952902 | AGGTAATGTCCATGT[A/G]GTCTCAGAGCTAATG | 71860 |
rs29422324 | snp | C/T | 0.375 | 0.216506 | intron-variant | Cfap52 | GRCm38.p3 | 11:67961141 | AGGGAATCAGTTTTC[C/T]AACAGCTTTAGCCAC | 71860 |
rs29425446 | snp | C/T | 0.375 | 0.216506 | intron-variant | Cfap52 | GRCm38.p3 | 11:67947289 | GAAGACCATGCTAGC[C/T]GGAATGAGCCCATCA | 71860 |
rs29431148 | snp | A/G | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Stx8, Cfap52 | Mm_Celera | 11:67967740 | TTCAAATTTTAGCCC[A/G]GTTGTAGAACGATTG | 71860 |
rs29444163 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Cfap52 | GRCm38.p3 | 11:67945891 | AATGAATTATGATTC[C/T]GTATATAATCACATC | 71860 |
rs29451713 | snp | A/G | 0.375 | 0.216506 | intron-variant | Cfap52 | GRCm38.p3 | 11:67962150 | TCACTACAGGTTGGT[A/G]GTGAGGTTCAAAAGC | 71860 |
rs29452088 | snp | C/G | 0.375 | 0.216506 | intron-variant | Cfap52 | Mm_Celera | 11:67955495 | CAGAGGTCCAAAATT[C/G]AATTCCCAAAAAACA | 71860 |
rs29455547 | snp | A/G | 0.32 | 0.24 | intron-variant | Cfap52 | GRCm38.p3 | 11:67928011 | GCTGATTCAGGTCCA[A/G]CCCATCACCTCTCAC | 71860 |
rs29456030 | snp | A/G | 0.32 | 0.24 | intron-variant | Cfap52 | GRCm38.p3 | 11:67956660 | GTCGTGCCAAGCAAA[A/G]TAAGCCAGGCATAGA | 71860 |
rs29458986 | snp | A/T | 0.375 | 0.216506 | upstream-variant-2KB | Stx8, Cfap52 | Mm_Celera | 11:67965975 | CATGGCATTGATACT[A/T]CTTTTTAAAAGAAAA | 71860 |
rs29472530 | snp | C/T | 0.375 | 0.216506 | intron-variant | Cfap52 | Mm_Celera | 11:67961600 | ACAGTAGAAAAATTA[C/T]AAAGTAGCAACAAAA | 71860 |
rs29476884 | snp | C/T | 0.375 | 0.216506 | intron-variant | Cfap52 | Mm_Celera | 11:67938328 | TTTTGCCACAACAGG[C/T]GAGCGGAGGTTGGAG | 71860 |
rs29479282 | snp | C/T | 0.5 | 0 | intron-variant | Cfap52 | Mm_Celera | 11:67932761 | ACCTGAGATATAGAG[C/T]GTTTGTGGCCTGCCT | 71860 |
rs45716954 | snp | A/C | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67962802 | GCCTGTCTCCTTCCC[A/C]GGCCCTCCAGTCCTG | 71860 |
rs45834075 | snp | C/T | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67941188 | TTAATGAGCGAGCTT[C/T]GAGGGCTGGGCTTAC | 71860 |
rs47103404 | snp | A/G | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67956929 | CTTCAGATTGCATGC[A/G]GTCAAGCTTGTAAGA | 71860 |
rs47211659 | snp | A/G | | | intron-variant | Cfap52 | Mm_Celera | 11:67950889 | AGACATTTTTGAATT[A/G]TCAATCCTTTTTGCA | 71860 |
rs49492908 | snp | A/G | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67962803 | CCTGTCTCCTTCCCA[A/G]GCCCTCCAGTCCTGG | 71860 |
rs51885138 | snp | C/T | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67941187 | CTTAATGAGCGAGCT[C/T]CGAGGGCTGGGCTTA | 71860 |
rs52052927 | snp | A/G | | | intron-variant | Cfap52 | Mm_Celera | 11:67944122 | GCTTGAATATAAAAT[A/G]ATAATATGATTAAGG | 71860 |
rs52177773 | snp | A/G | | | intron-variant | Cfap52 | Mm_Celera | 11:67962646 | GGTATGTGTGTGCAC[A/G]TGTGCATGTGTGTGT | 71860 |
rs52192776 | snp | A/C | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67962229 | TCTCTCTCTCTCTCT[A/C]TCTCTCACTACTGCC | 71860 |
rs52595559 | snp | A/G | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67953391 | AGGCTTTCCAAGAAG[A/G]AGGAGGAAGAGGAGG | 71860 |
rs52609122 | snp | A/C | | | intron-variant | Cfap52 | Mm_Celera | 11:67962634 | AAGAGGAGAAGTGGT[A/C]TGTGTGTGCACGTGT | 71860 |
rs52611937 | snp | A/G | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67962621 | GCTTCACTCCCTCAA[A/G]AGGAGAAGTGGTATG | 71860 |
rs52622135 | snp | C/T | | | intron-variant | Cfap52 | Mm_Celera | 11:67958549 | ttctttccttccttc[C/T]ttctttctgtctgtc | 71860 |
rs52626758 | snp | A/G | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67937921 | GAAAAGAAAGAAAGA[A/G]AGAGAAAGAAAGAAA | 71860 |
rs52640578 | snp | A/G | | | intron-variant | Cfap52 | Mm_Celera | 11:67937923 | AAAGAAAGAAAGAAA[A/G]AGAAAGAAAGAAAGA | 71860 |
rs52641516 | snp | C/G | | | intron-variant | Cfap52 | GRCm38.p3 | 11:67962616 | ACAGTGCTTCACTCC[C/G]TCAAGAGGAGAAGTG | 71860 |
rs107903845 | snp | G/T | | | intron-variant | Cfap52 | Mm_Celera | 11:67955395 | GCCTTCTTAGGGTGT[G/T]TCAGTGTACTAATGT | 71860 |
rs107978436 | snp | A/C | | | intron-variant | Cfap52 | Mm_Celera | 11:67962690 | TGTTGTGTAGGCCTG[A/C]GGATAATGTTGGATT | 71860 |
rs108134333 | snp | A/G | | | intron-variant | Cfap52 | Mm_Celera | 11:67956344 | TCTCTCTAGCCCCCA[A/G]TTGCAATCCCTTATA | 71860 |