DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Trim9; Kiaa0282 ATTTA 152-2296 2553-2557;2754-2758;3427-3431;3858-3862 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.! Trim9; Kiaa0282 WWATTTAWW 152-2296 3856-3864 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.!

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT014157 mmu-miR-181a-5p Mus musculus Trim9 94090 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT009618 mmu-miR-223-3p Mus musculus Trim9 94090 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT009618 mmu-miR-223-3p Mus musculus Trim9 94090 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT595919 mmu-miR-677-5p Mus musculus Trim9 94090 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT595920 mmu-miR-667-3p Mus musculus Trim9 94090 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT595918 mmu-miR-344f-5p Mus musculus Trim9 94090 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004521 mmu-miR-15b* 94090 Trim9 aucucGUCGUUUAUUACUA-AGc :||||:| |||||| || uuccuUAGCAGA-AAUGAUGUCa 2 18 986 1007 [mm9:12:71346369-71346390:-] 0.5774 127 0 -13.83 -0.4739 MIMAT0004523 mmu-miR-29b* 94090 Trim9 auUUGGUGGUAUACUUUGGUCg |: |||:: : ||||||| cuAGGCACUG-GGAAAACCAGg 2 21 646 666 [mm9:12:71346710-71346730:-] 0.5519 146 7 -14.42 -0.1456 MIMAT0004527 mmu-miR-124* 94090 Trim9 uaGUUCCAGGCGACACU-UGUGc :||| || |||| |||| uaUAAGACCCAGAGUGAGACACa 2 21 11 33 [mm9:12:71349123-71349145:-] 0.5049 120 0 -13.81 -0.2720 MIMAT0004527 mmu-miR-124* 94090 Trim9 uagUUCCAGGCGA-CACUUGUGc | | | :|:| ||||||| agaAUGCUGUGUUCAUGAACACc 2 20 747 769 [mm9:12:71346607-71346629:-] 0.5780 146 7 -18.69 -0.2215 MIMAT0004529 mmu-miR-125b* 94090 Trim9 uccaggguucuuggACUGAACa ||||||| gguuagaguucuagUGACUUGu 2 9 1716 1737 [mm9:12:71345639-71345660:-] 0.6427 140 7 -17.55 -0.5295 MIMAT0000152 mmu-miR-140* 94090 Trim9 ggcaccaAGAUGGGACACCAu |: :: ||||||| uuacucaUUAGUGCUGUGGUc 2 15 1014 1034 [mm9:12:71346342-71346362:-] 0.5774 142 7 -14.47 -0.2286 MIMAT0004534 mmu-miR-145* 94090 Trim9 guucuugUCAUAAAGGUCCUUa :| || ||||||| ggccccaGGAAUGCCCAGGAAa 2 16 190 211 [mm9:12:71348945-71348966:-] 0.5149 147 7 -16.06 -0.4356 MIMAT0004534 mmu-miR-145* 94090 Trim9 guucuugucauaaaGGUCCUUa ||||||| uacuuuccacugagCCAGGAAc 2 9 1398 1419 [mm9:12:71345957-71345978:-] 0.5710 140 7 -11.63 -0.1651 MIMAT0004541 mmu-miR-188-3p 94090 Trim9 acgUUUGGGACGUACACCCUc :||| |||: ||||||| acaGAACACUGU-UGUGGGAc 2 19 1614 1633 [mm9:12:71345743-71345762:-] 0.6427 160 7 -20.98 -0.3580 MIMAT0004544 mmu-miR-193* 94090 Trim9 aguagaaCGGGCGU-UUCUGGGu ||: |:| ||||||| --gggaaGCUGGUAUAAGACCCa 2 16 1 21 [mm9:12:71349135-71349155:-] 0.5235 150 7 -20.12 -0.2756 MIMAT0004572 mmu-miR-290-3p 94090 Trim9 cccgaaUUUUGAUCCG---CCGUGAAa |||:| | | ||||||| ccaggaAAAGCAAAUCUUAGGCACUUa 2 19 204 230 [mm9:12:71348926-71348952:-] 0.5007 145 7 -13.94 -1.0285 MIMAT0000367 mmu-miR-291a-5p 94090 Trim9 ucucuccCGGAGGUGAAACUAc |::| ||||||| uauccuuGUUUGGUCUUUGAUu 2 16 1634 1655 [mm9:12:71345721-71345742:-] 0.6427 143 7 -10.46 -0.4863 MIMAT0000370 mmu-miR-292-3p 94090 Trim9 ugugaGUUUUGGACCGCCGUGAAa |||| |:| ||||||| aaaagCAAAUCUU--AGGCACUUa 2 20 209 230 [mm9:12:71348926-71348947:-] 0.5007 152 7 -15.81 -1.0257 MIMAT0000375 mmu-miR-297a 94090 Trim9 uguacguGUACGUGUGUAUGUa :|| |::|||||| cuacaacUAUAGAUGCAUACAa 2 16 1759 1780 [mm9:12:71345596-71345617:-] 0.6158 135 6 -12.90 -0.2331 MIMAT0004578 mmu-miR-300* 94090 Trim9 uguuuccuauuGGAGAGAAGUu :| ||||||| cuuuuuguccuUCACUCUUCAu 2 12 247 268 [mm9:12:71348888-71348909:-] 0.4962 143 7 -12.16 -0.5487 MIMAT0005438 mmu-miR-30c-2* 94090 Trim9 ucucauUUGUCGGAAGAGG-GUc | ||||| ||||| || uuucccAUCAGCC-UCUCCGCAu 2 17 130 151 [mm9:12:71347225-71347246:-] 0.5239 122 0 -18.07 -0.1125 MIMAT0004618 mmu-miR-196a* 94090 Trim9 agUCCGUC-AAAGAAC-AACGGCu || ||| ||| | |||||| gaAGCCAGAUUUAGAGUUUGCCGu 2 21 450 473 [mm9:12:71346903-71346926:-] 0.5455 123 6 -14.73 -0.3456 MIMAT0004629 mmu-miR-22* 94090 Trim9 auuUCGAACGGUG--ACU-UCUUGa ||:|| |||: || ||||| ugcAGUUUCCCAUAGAGACAGAACa 2 20 317 341 [mm9:12:71348815-71348839:-] 0.5221 122 0 -13.11 -0.4127 MIMAT0000549 mmu-miR-322* 94090 Trim9 cacaacgucgcgaAGUACAAa ||||||| gauucuuuuccgaUCAUGUUu 2 9 322 342 [mm9:12:71347034-71347054:-] 0.5495 140 7 -10.79 -0.4592 MIMAT0000588 mmu-miR-341 94090 Trim9 uggcUGGCUGGCU-AGCUGGCu ||| | | ||||||| ccucACCCAGAAACUCGACCGc 2 18 172 193 [mm9:12:71347183-71347204:-] 0.5651 144 7 -17.12 -0.1113 MIMAT0004664 mmu-miR-214* 94090 Trim9 cgUGUCGUUCACAUCUGUC-CGu |::| || ||:||||| || ggAUGGGAA-AGUGGACAGCGCu 2 21 1450 1471 [mm9:12:71345905-71345926:-] 0.5710 122 0 -15.62 -0.2976 MIMAT0000706 mmu-miR-362-5p 94090 Trim9 uaaguguggauccaAGGUUCCUAa | ||||||| ucagcggacagucgUACAAGGAUg 2 11 58 81 [mm9:12:71347295-71347318:-] 0.5062 142 7 -14.25 -0.1500 MIMAT0001637 mmu-miR-452 94090 Trim9 cagagucaaaggaGACGUUUGu :||||||| cgggccucugaagUUGCAAACc 2 10 1104 1125 [mm9:12:71346251-71346272:-] 0.5774 141 7 -15.28 -0.2702 MIMAT0001637 mmu-miR-452 94090 Trim9 cagaGUCAAAGGAGAC-GUUUGu |:|| | | ||| ||||| aagaCGGUGU-CACUGACAAACc 2 19 848 869 [mm9:12:71346507-71346528:-] 0.5692 120 0 -14.45 -0.1309 MIMAT0004758 mmu-miR-463 94090 Trim9 gauggAAUAUACCACA-GAUAGu ||: |||| || ||||| auuuaUUGAAUGG-GUGCUAUCc 2 18 1562 1583 [mm9:12:71345793-71345814:-] 0.6427 123 0 -13.69 -0.2854 MIMAT0004217 mmu-miR-465a-3p 94090 Trim9 agaUGAAUCUUUC-----CGGGACUAg |: ||||: | |||||||| gacAUCUAGAGUGUUCUUGCCCUGAUu 2 20 476 502 [mm9:12:71346874-71346900:-] 0.5455 146 7 -17.16 -0.2694 MIMAT0003409 mmu-miR-467a 94090 Trim9 gcguaUAUGUACGUCCGUGAAu | |: | :|||||||| aaagcAAAUCU-UAGGCACUUa 2 18 210 230 [mm9:12:71348926-71348946:-] 0.5007 147 7 -17.36 -1.0340 MIMAT0003173 mmu-miR-547 94090 Trim9 gaGUGAGUUUCUACAUGGUUc ||| ||:| | ||||||| caCAC-CAGACAAGUACCAAc 2 20 905 924 [mm9:12:71346452-71346471:-] 0.5836 161 7 -15.53 -0.2462 MIMAT0003189 mmu-miR-291b-5p 94090 Trim9 ccucuccCGGAGGUGAAACUAg |::| ||||||| uauccuuGUUUGGUCUUUGAUu 2 16 1634 1655 [mm9:12:71345721-71345742:-] 0.6427 143 7 -14.20 -0.4863 MIMAT0003373 mmu-miR-302b* 94090 Trim9 ucuuucGUAAGGGUACA--AUUUCa :||||::|||| ||||| aaccuaUAUUCUUAUGUAAUAAAGc 2 18 782 806 [mm9:12:71346570-71346594:-] 0.5547 121 0 -14.68 -0.7262 MIMAT0003726 mmu-miR-675-3p 94090 Trim9 ugacucgccaAUC-CCGUAUGUc ||| ||||||| acuacaacuaUAGAUGCAUACAa 2 13 1758 1780 [mm9:12:71345596-71345618:-] 0.6158 143 7 -8.67 -1.2455 MIMAT0004187 mmu-miR-744 94090 Trim9 acgacaaUCGGGAUCGGGGCGu ||| ||||||||| gcugggaAGCAGUAGCCCCGCc 2 16 280 301 [mm9:12:71348855-71348876:-] 0.5091 159 7 -30.78 -0.3189 MIMAT0003728 mmu-miR-374* 94090 Trim9 gaGCCUGUUACUAUUAUGUUGg | || |:| ||||||||| ucCAGA-AGUCUUAAUACAACc 2 21 564 584 [mm9:12:71346792-71346812:-] 0.5455 158 7 -14.54 -0.4073 MIMAT0003733 mmu-miR-665 94090 Trim9 ucCCUGGAGUCGGAGGACCa |||: ||| ||||||| guGGAUGUCA--CUCCUGGc 2 19 1265 1282 [mm9:12:71346094-71346111:-] 0.5681 155 7 -22.03 -0.1007 MIMAT0003733 mmu-miR-665 94090 Trim9 ucccuggagUCGGAGGACCa | :||||||| ccaaaagaaAUUCUCCUGGa 2 12 371 390 [mm9:12:71346986-71347005:-] 0.5615 143 7 -15.25 -1.0731 MIMAT0014815 mmu-miR-3099* 94090 Trim9 guucccgaccuUCCUUCGACc :|||||||| -----------GGGAAGCUGg 2 11 1 10 [mm9:12:71349146-71349155:-] 0.5235 146 7 -18.11 -0.1320 MIMAT0003897 mmu-miR-759 94090 Trim9 caguuuuaacaaacGUGAGACg ||||||| augcugaacccacaCACUCUGg 2 9 879 900 [mm9:12:71346476-71346497:-] 0.5836 140 7 -12.25 -0.3121 MIMAT0003898 mmu-miR-760 94090 Trim9 agGGGUG-UCUGGGUCU-CGGc ||||| :|| |||| ||| caCCCACGGGAGACAGACGCCu 2 19 75 96 [mm9:12:71349060-71349081:-] 0.4864 125 0 -26.60 -0.2509 MIMAT0003898 mmu-miR-760 94090 Trim9 aggGGUGUCUGG-GUCUCGGc :||| ||| ||||||| cugUCACUCACCGCAGAGCCc 2 18 965 985 [mm9:12:71346391-71346411:-] 0.5774 156 7 -23.25 -0.1067 MIMAT0003451 mmu-miR-677 94090 Trim9 agUCUUCGAUUAGUAGUGACUu || || ||||||||| ucAGCCUCUCCGCAUCACUGAa 2 21 137 158 [mm9:12:71347218-71347239:-] 0.5445 152 7 -20.77 -0.2083 MIMAT0003451 mmu-miR-677 94090 Trim9 agucUUCGAUUAGUAGUGACUu ||| ::| :||||||| gcccAAGACGGU-GUCACUGAc 2 19 844 864 [mm9:12:71346512-71346532:-] 0.5547 148 7 -13.84 -0.1510 MIMAT0003462 mmu-miR-684 94090 Trim9 aacugaacuuCCCUUUUGa |||||||| ucuaggcacuGGGAAAACc 2 10 645 663 [mm9:12:71346713-71346731:-] 0.5519 145 7 -13.41 -0.1043 MIMAT0003467 mmu-miR-688 94090 Trim9 cuuauUCAUC--AGCGGACGCu ||||| |||||||| gaagcAGUAGCCCCGCCUGCGa 2 16 285 306 [mm9:12:71348850-71348871:-] 0.5091 154 7 -26.12 -0.1131 MIMAT0003469 mmu-miR-690 94090 Trim9 aaACCAACACUCGGAUCG-GAAa | || |||| :|||| ||| ucUUGUCGUGAUGUUAGCUCUUu 2 21 502 524 [mm9:12:71346852-71346874:-] 0.5455 128 0 -14.06 -0.1991 MIMAT0003472 mmu-miR-693-5p 94090 Trim9 cuuUUGAAAGCCUACACCGAc |:|| |: ||||||| guuAGCUCUU---UGUGGCUa 2 19 514 531 [mm9:12:71346845-71346862:-] 0.5455 142 7 -11.40 -0.5101 MIMAT0003476 mmu-miR-669b 94090 Trim9 ugUACG-UGUACGU-GUGUUU-UGa || | || || | |||||| || uaAUACAACCUGAAGCACAAAUACa 2 21 575 599 [mm9:12:71346777-71346801:-] 0.5455 122 0 -10.13 -0.2822 MIMAT0005448 mmu-miR-467b 94090 Trim9 guaUAUGUACGUCCGUGAAUg | |: | :||||||||| agcAAAUCU-UAGGCACUUAu 2 19 212 231 [mm9:12:71348925-71348944:-] 0.5007 152 7 -15.91 -0.4038 MIMAT0003479 mmu-miR-669c 94090 Trim9 uguGUGUAGGUGUG-UGUUGAUa :||| |:: || ||||||| guuUACAACUGAACUACAACUAu 2 20 1746 1768 [mm9:12:71345608-71345630:-] 0.6292 158 7 -14.86 -0.6732 MIMAT0003480 mmu-miR-297b-5p 94090 Trim9 uguacaaGUACGUGUGUAUGUa :|| |::|||||| cuacaacUAUAGAUGCAUACAa 2 16 1759 1780 [mm9:12:71345596-71345617:-] 0.6158 135 6 -10.74 -0.2352 MIMAT0003498 mmu-miR-708* 94090 Trim9 gaucuUCGAGUGUCAGAUCAAc | | : :: ||||||| uauuuAUCCUUUGCUCUAGUUu 2 18 110 131 [mm9:12:71349025-71349046:-] 0.5081 141 7 -9.66 -0.5217 MIMAT0003498 mmu-miR-708* 94090 Trim9 gaucuucgagugucAGAUCAAc ||||||| ugucuugguguuuuUCUAGUUa 2 9 1533 1554 [mm9:12:71345822-71345843:-] 0.6427 140 7 -10.20 -0.9311 MIMAT0003499 mmu-miR-709 94090 Trim9 aggAG-GACGGAGACG-GAGg || |||: ||||| ||| ccaUCGCUGUGUCUGCUCUCu 2 17 1155 1175 [mm9:12:71346201-71346221:-] 0.5728 123 0 -22.57 -0.1279 MIMAT0003509 mmu-miR-501-3p 94090 Trim9 guUUAGG-AACGGGCCCACG-UAa |||:: ||| :|||||| || cuAAUUUAUUGAAUGGGUGCUAUc 2 21 1559 1582 [mm9:12:71345794-71345817:-] 0.6427 127 0 -17.84 -0.3305 MIMAT0004845 mmu-miR-881* 94090 Trim9 ucuacACUGACAAUAGAGA-GAc | ||| | :||||| || uaucuUAACUAUGGUCUCUGCUg 2 18 945 967 [mm9:12:71346409-71346431:-] 0.5805 121 0 -13.71 -0.2679 MIMAT0004849 mmu-miR-883a-3p 94090 Trim9 uauGACUCUCGA-C----AACGUCAAu ||| |||:| | |||||||| cgcCUGCGAGUUAGAUACUUGCAGUUu 2 20 298 324 [mm9:12:71348832-71348858:-] 0.5221 153 7 -17.74 -0.3892 MIMAT0004851 mmu-miR-883b-3p 94090 Trim9 uaugaCUC--UCUA-CAACGUCAAu ||| |||| |||||||| ccugcGAGUUAGAUACUUGCAGUUu 2 18 300 324 [mm9:12:71348832-71348856:-] 0.5221 155 7 -16.52 -0.3862 MIMAT0004856 mmu-miR-105 94090 Trim9 uggUGUUCGUAGACUCGUGAACc :::|||| | ||||||| gagGUGAGCA-GAGUGCACUUGg 2 21 540 561 [mm9:12:71346815-71346836:-] 0.5455 150 7 -20.32 -0.1114 MIMAT0004865 mmu-miR-297c 94090 Trim9 uguacauGUACGUGUGUAUGUa :|| |::|||||| cuacaacUAUAGAUGCAUACAa 2 16 1759 1780 [mm9:12:71345596-71345617:-] 0.6158 135 6 -12.58 -0.2331 MIMAT0004872 mmu-miR-465b-3p 94090 Trim9 agaUGAAUCUUUC-----CGGGACUAg |: ||||: | |||||||| gacAUCUAGAGUGUUCUUGCCCUGAUu 2 20 476 502 [mm9:12:71346874-71346900:-] 0.5455 146 7 -17.16 -0.2694 MIMAT0004874 mmu-miR-465c-3p 94090 Trim9 agaUGAAUCUUUC-----CGGGACUAg |: ||||: | |||||||| gacAUCUAGAGUGUUCUUGCCCUGAUu 2 20 476 502 [mm9:12:71346874-71346900:-] 0.5455 146 7 -17.16 -0.2694 MIMAT0004877 mmu-miR-466c-5p 94090 Trim9 auACAUGUACGUGU-GUGU-GUAg || | |||| | |||| ||| ucUGAAGUUGCAAACCACACCAUu 2 21 1110 1133 [mm9:12:71346243-71346266:-] 0.5774 123 0 -12.25 -0.2853 MIMAT0004893 mmu-miR-574-5p 94090 Trim9 ugUGUGAGUGUGUGUGUGUGAGu |::|| | || ||||||||| ugAUGCUGA-ACCCACACACUCu 2 22 877 898 [mm9:12:71346478-71346499:-] 0.5836 167 7 -19.13 -0.1325 MIMAT0004930 mmu-miR-466d-5p 94090 Trim9 guAC-AUGUACAUGCGUGUGUGu || |:| || || ||||||| auUGAUGC-UGAACCCACACACu 2 21 875 896 [mm9:12:71346480-71346501:-] 0.5836 157 7 -15.20 -0.2172 MIMAT0004933 mmu-miR-878-3p 94090 Trim9 agAUGGGUCACACCACAGU-ACg |:|||| ||||||| || caUGCCCAAGACGGUGUCACUGa 2 21 841 863 [mm9:12:71346513-71346535:-] 0.5547 128 0 -21.91 -0.4366 MIMAT0004938 mmu-miR-875-3p 94090 Trim9 guauCGGAGUCAU-AAAAG-UCc |:||::||: ||||| || cucuGUCUUGGUGUUUUUCUAGu 2 18 1530 1552 [mm9:12:71345824-71345846:-] 0.6427 124 0 -12.77 -0.6991 MIMAT0005292 mmu-miR-582-3p 94090 Trim9 aacccaagucAACAAGUUGUCc || |||||||| ucucgccccuUUAUUCAACAGc 2 13 351 372 [mm9:12:71348784-71348805:-] 0.5221 152 7 -9.32 -0.1678 MIMAT0005292 mmu-miR-582-3p 94090 Trim9 aacccaagucaacAAGUUGUCc |||||||| agaccugaaugacUUCAACAGa 2 10 143 164 [mm9:12:71348992-71349013:-] 0.5246 145 7 -8.73 -0.7906 MIMAT0005830 mmu-miR-466l 94090 Trim9 uuauacacacGUACAUAAAUAu ::| ||||||| uucucuacccUGUCUAUUUAUc 2 13 96 117 [mm9:12:71349039-71349060:-] 0.4890 144 7 -1.57 -0.2691 MIMAT0005831 mmu-miR-669k 94090 Trim9 aacguacgcacauaUACGUAu |||||| aacuacaacuauagAUGCAUa 2 8 1757 1777 [mm9:12:71345599-71345619:-] 0.6158 120 6 -7.38 -0.2254 MIMAT0005836 mmu-miR-1186 94090 Trim9 guacgGAAAUUAAGGU-CGUGAg || |:| |||| ||||| aacuaCUAUGA-UCCAGGCACUg 2 18 714 735 [mm9:12:71346641-71346662:-] 0.5766 123 0 -13.95 -0.4626 MIMAT0005837 mmu-miR-1187 94090 Trim9 aaUGUGUGU-AUGUGUGUGU-GUAu |: | || ||| ||||| ||| acAUCCUCAGGACAAACACACCAUc 2 22 1135 1159 [mm9:12:71346217-71346241:-] 0.5774 124 0 -13.14 -0.1486 MIMAT0005842 mmu-miR-669h-3p 94090 Trim9 acacguacacacauaUACGUAu |||||| gaacuacaacuauagAUGCAUa 2 8 1756 1777 [mm9:12:71345599-71345620:-] 0.6158 120 6 -7.38 -0.2254 MIMAT0005843 mmu-miR-1188 94090 Trim9 aggaccGGGUUGG-AGUGUGGu :|:::|: ||||||| acacacUCUGGCUAUCACACCa 2 16 890 911 [mm9:12:71346465-71346486:-] 0.5836 146 7 -24.85 -0.5609 MIMAT0005845 mmu-miR-466k 94090 Trim9 agUGUACAUGU-ACAU--GUGUGUGu | || |:: || | ||||||| ugAGAUUGAUGCUGAACCCACACACu 2 22 871 896 [mm9:12:71346480-71346505:-] 0.5836 143 7 -13.73 -0.2172 MIMAT0005852 mmu-miR-1194 94090 Trim9 ucCUAGA-UCGU--CAAUGAGUAAg ||| | |||| |||||||||| auGAUGUCAGCAUUGUUACUCAUUa 2 21 999 1023 [mm9:12:71346353-71346377:-] 0.5774 170 7 -18.46 -0.4260 MIMAT0007869 mmu-miR-1899 94090 Trim9 ccUUCGUCUAAGCCGGUAGCGa || ||| | ||||||| caAAUGAGACU---CCAUCGCu 2 21 1186 1204 [mm9:12:71346172-71346190:-] 0.5681 144 7 -14.69 -0.3140 MIMAT0007869 mmu-miR-1899 94090 Trim9 ccUUC-GUCUAAGCCGGUAGCGa |:| || | | ||||||| ucAGGACAAACAC-ACCAUCGCu 2 21 1141 1162 [mm9:12:71346214-71346235:-] 0.5774 141 7 -17.01 -0.3509 MIMAT0007874 mmu-miR-1904 94090 Trim9 ggAGGGAGGUCUCCUC-GUCUUg |::| ||| | ||| ||||| agUUUC-CCAUA-GAGACAGAAc 2 21 320 340 [mm9:12:71348816-71348836:-] 0.5221 120 0 -23.12 -0.4644 MIMAT0007874 mmu-miR-1904 94090 Trim9 ggaGGGAGGUCUCCUCGUCUUg ||||:| ||||||| gagCCCUUC--CUUAGCAGAAa 2 20 980 999 [mm9:12:71346377-71346396:-] 0.5774 144 7 -20.20 -0.8230 MIMAT0009397 mmu-miR-1933-3p 94090 Trim9 uaucAGUGUGACUACCAG-GACc |:| ||| |||||| ||| uaucUUA-ACU-AUGGUCUCUGc 2 19 945 965 [mm9:12:71346411-71346431:-] 0.5805 122 0 -15.88 -0.3065 MIMAT0009402 mmu-miR-1938 94090 Trim9 cuGGCUUGAUGUUCAGGGUGGc || || |:| ||||||| aaCCCAA-UGC-UUUCCCACCa 2 21 922 941 [mm9:12:71346435-71346454:-] 0.5836 144 7 -17.69 -0.9400 MIMAT0009416 mmu-miR-1949 94090 Trim9 uugauacgaCUGUAGGACCAUAUc |: | |||||||| ---------GGGAAGCUGGUAUAa 2 16 1 15 [mm9:12:71349141-71349155:-] 0.5235 147 7 -11.24 -0.1275 MIMAT0009417 mmu-miR-1950 94090 Trim9 acUGGUAUAGGAAUCUACGUcu ||:| | |: |||||||| gaACUACAACUAUAGAUGCAua 3 21 1756 1777 [mm9:12:71345599-71345620:-] 0.6158 148 0 -12.54 -0.2039 MIMAT0009418 mmu-miR-669l 94090 Trim9 ugUAUAUGUACGUGUG-UGUUGa :| |||| :: || ||||| uaGUUUACAACUGAACUACAACu 2 21 1744 1766 [mm9:12:71345610-71345632:-] 0.6292 120 0 -10.79 -1.0461 MIMAT0009421 mmu-miR-669o 94090 Trim9 ugUAUUUGU-ACGUGUGUGU-UGAu || :|:: || || |||| ||| agAUUGAUGCUGAACCCACACACUc 2 22 873 897 [mm9:12:71346479-71346503:-] 0.5836 124 0 -12.80 -0.1177 MIMAT0009424 mmu-miR-1953 94090 Trim9 gucUUCGGACUCUUGAAAGGGu ||| || | ||||||| uaaAAG-CUCCGCCCUUUCCCa 2 20 116 136 [mm9:12:71347240-71347260:-] 0.5239 149 7 -16.38 -0.1529 MIMAT0009424 mmu-miR-1953 94090 Trim9 gucUUCGGACUCUUGAAAGGGu || || | :||||||| accAACCC--AAUGCUUUCCCa 2 20 919 938 [mm9:12:71346438-71346457:-] 0.5836 144 7 -16.20 -0.5453 MIMAT0009425 mmu-miR-1954 94090 Trim9 uugucccagaGUGAGACGUCa || ||||||| auucaacagcCA-UCUGCAGg 2 12 363 382 [mm9:12:71348774-71348793:-] 0.5221 141 7 -15.40 -0.2264 MIMAT0009435 mmu-miR-1962 94090 Trim9 uacACAGGGUCACGGUCGGAGa | ||||| :||||||| cccUUUCCCA---UCAGCCUCu 2 20 127 145 [mm9:12:71347231-71347249:-] 0.5239 151 7 -23.03 -0.2050 MIMAT0009445 mmu-miR-1274a 94090 Trim9 accgcggacuuguccCUGGACu |||||| uuucuucuuuaaguaGACCUGa 2 8 129 150 [mm9:12:71349006-71349027:-] 0.5246 120 6 -14.20 -0.1004 MIMAT0009445 mmu-miR-1274a 94090 Trim9 accgcggaCUUGU-CCCUGGACu ||||: ||||||| guuuuaggGAACGUAGGACCUGu 2 15 1345 1367 [mm9:12:71346009-71346031:-] 0.5710 149 7 -20.15 -0.1567 MIMAT0011210 mmu-miR-2134 94090 Trim9 cguggGGCAAAGGGU-UCUg | |||||||| ||| acuugCAGUUUCCCAUAGAg 2 15 314 333 [mm9:12:71348823-71348842:-] 0.5221 126 0 -15.88 -0.5050 MIMAT0011210 mmu-miR-2134 94090 Trim9 cguggggcaAAGGGUUCUg | ||||||| aaggaaacaUGCCCAAGAc 2 11 834 852 [mm9:12:71346524-71346542:-] 0.5547 142 7 -15.47 -0.1020 MIMAT0011212 mmu-miR-2136 94090 Trim9 guGUA-GAGU-CAG-UUGUG-GGUc ||| |||| | | ||||| ||| uaCAUCCUCAGGACAAACACACCAu 2 20 1134 1158 [mm9:12:71346218-71346242:-] 0.5774 124 0 -22.09 -0.2245 MIMAT0015641 mmu-miR-3470b 94090 Trim9 ggUCGGACCAGAU-----GUCUCACu || ||||| || ||||||| gaAG-CUGGUAUAAGACCCAGAGUGa 2 20 3 27 [mm9:12:71349129-71349153:-] 0.5235 148 7 -20.57 -0.2654 MIMAT0000124 mmu-miR-15b 94090 Trim9 acaUUUGGUA-CUACAC-GACGAu | ||||| | |||| ||||| aacACACCAUCGCUGUGUCUGCUc 2 20 1149 1172 [mm9:12:71346204-71346227:-] 0.5728 134 0 -17.74 -0.1641 MIMAT0000127 mmu-miR-29b 94090 Trim9 uugUGACUAAAGUU---U-ACC-ACGAu | ||| ||||| | ||| |||| cugAAUGACUUCAACAGACUGGCUGCUg 2 21 147 174 [mm9:12:71348982-71349009:-] 0.5246 122 0 -15.01 -0.3272 MIMAT0000127 mmu-miR-29b 94090 Trim9 uuguGACUAA--AGUUUA-CCACGAu || ||| |::||| |||||| gaacCUAAUUUAUUGAAUGGGUGCUa 2 20 1555 1580 [mm9:12:71345796-71345821:-] 0.6427 130 6 -16.83 -0.7709 MIMAT0000128 mmu-miR-30a 94090 Trim9 gaaggucagcuccuaCAAAUGu |||||| gacuuguaacaaauaGUUUACa 2 8 1731 1752 [mm9:12:71345624-71345645:-] 0.6427 120 6 -9.34 -0.1238 MIMAT0000130 mmu-miR-30b 94090 Trim9 ucgacucacauccuaCAAAUGu |||||| gacuuguaacaaauaGUUUACa 2 8 1731 1752 [mm9:12:71345624-71345645:-] 0.6427 120 6 -8.11 -0.1238 MIMAT0000142 mmu-miR-9 94090 Trim9 aguaUGUCGAUCUAU-UGGUUUCu | ||: ||| | ||||||| acccAGAGUGAGACACACCAAAGa 2 20 17 40 [mm9:12:71349116-71349139:-] 0.5049 158 7 -16.50 -0.4681 MIMAT0000156 mmu-miR-144 94090 Trim9 ucaUGUA-GUAGAUAUGACAu |:|| || ||||||| caaAUAUAGAUGCAUACUGUa 2 18 1778 1798 [mm9:12:71345578-71345598:-] 0.6158 148 7 -11.54 -0.5115 MIMAT0000159 mmu-miR-149 94090 Trim9 cccucacuucuGUGCCUCGGUCu ||| ||||||| uaaauacuuucCACUGAGCCAGg 2 13 1394 1416 [mm9:12:71345960-71345982:-] 0.5710 152 7 -18.24 -0.3739 MIMAT0000210 mmu-miR-181a 94090 Trim9 ugagUGGCUGUCGCAACUUACAa :|| || |||||||| acaaGCCUUAAGAAUUGAAUGUu 2 20 1038 1060 [mm9:12:71346316-71346338:-] 0.5774 151 7 -15.38 -0.9839 MIMAT0000215 mmu-miR-186 94090 Trim9 ucggguuuuccucUUAAGAAAc :||||||| uugaauuacuuuuGAUUCUUUu 2 10 309 330 [mm9:12:71347046-71347067:-] 0.5495 141 7 -6.05 -0.3282 MIMAT0000215 mmu-miR-186 94090 Trim9 ucggGUUUUCCUCUUAA-GAAAc |: |:| ||||| |||| uuaaCGUAGGUUGAAUUACUUUu 2 19 299 321 [mm9:12:71347055-71347077:-] 0.5495 122 0 -10.51 -0.6038 MIMAT0000219 mmu-miR-24 94090 Trim9 gacaAGGACGACUUGACUCGGu | || :| |||||||| uaaaUACU-UUCCACUGAGCCa 2 19 1394 1414 [mm9:12:71345962-71345982:-] 0.5710 148 7 -19.65 -0.7838 MIMAT0000221 mmu-miR-191 94090 Trim9 gucgacGAAAAC-CCUAAGGCAAc ||| | | ||||||| gacaccCUUCAGAUGUUUCCGUUu 2 18 1313 1336 [mm9:12:71346040-71346063:-] 0.5710 144 7 -11.89 -0.3308 MIMAT0000221 mmu-miR-191 94090 Trim9 gucGACGAAAACCCUAA-GGCAAc | | ||| | | || ||||| agcCAGAUUUAGAGUUUGCCGUUu 2 21 452 475 [mm9:12:71346901-71346924:-] 0.5455 124 0 -9.26 -0.3152 MIMAT0000224 mmu-miR-194 94090 Trim9 agguguaccuCAACGACAAUGu || ||||||| ucugcucucuGUGCCUGUUACa 2 13 1166 1187 [mm9:12:71346189-71346210:-] 0.5681 144 7 -13.98 -0.2729 MIMAT0000225 mmu-miR-195 94090 Trim9 cgGUUAUAAAGACAC-GACGAu || || ||||| ||||| caCACCAUCGCUGUGUCUGCUc 2 20 1151 1172 [mm9:12:71346204-71346225:-] 0.5728 127 0 -18.48 -0.1657 MIMAT0000229 mmu-miR-199a-5p 94090 Trim9 cuUGUCCAU-CAGAC-UUGUGACCc ||| || || | ||||||| gcACAAAUACAUCGGCUACACUGGc 2 22 589 613 [mm9:12:71346763-71346787:-] 0.5455 147 7 -12.34 -0.1016 MIMAT0000237 mmu-miR-204 94090 Trim9 uccgUAUCCUACUGUUUC-CCUu :|:|||||: |||| ||| agaaGUGGGAUGGGAAAGUGGAc 2 19 1443 1465 [mm9:12:71345911-71345933:-] 0.5710 134 0 -22.54 -0.2254 MIMAT0000246 mmu-miR-122 94090 Trim9 guUUGUGGUAACAGUG-UGAGGu | ||||: |:|| ||||| gcACCACCGCGCUUACGACUCCu 2 21 1281 1303 [mm9:12:71346073-71346095:-] 0.5681 124 0 -18.64 -0.2830 MIMAT0000247 mmu-miR-143 94090 Trim9 cucGAUGUCACGAAGUAGAGu || |:| | ||||||| gucCUCCGG-G--UCAUCUCu 2 19 1516 1533 [mm9:12:71345843-71345860:-] 0.6427 141 7 -14.28 -0.1319 MIMAT0000248 mmu-miR-30e 94090 Trim9 gaaggucaguuccuaCAAAUGu |||||| gacuuguaacaaauaGUUUACa 2 8 1731 1752 [mm9:12:71345624-71345645:-] 0.6427 120 6 -10.94 -0.1214 MIMAT0000381 mmu-miR-34c 94090 Trim9 cguuaGUCGAUUGA-UGUGACGGa :| ||| || :||||||| uuaccUACCUACCUGGCACUGCCa 2 19 350 373 [mm9:12:71347003-71347026:-] 0.5555 157 7 -16.67 -0.3142 MIMAT0000382 mmu-miR-34b-5p 94090 Trim9 uguuaGUCGAU-UAAUGUGACGGa :| ||| | :||||||| uuaccUACCUACCUGGCACUGCCa 2 19 350 373 [mm9:12:71347003-71347026:-] 0.5555 149 7 -14.45 -0.3142 MIMAT0000514 mmu-miR-30c 94090 Trim9 cgacucucacauccuaCAAAUGu |||||| ugacuuguaacaaauaGUUUACa 2 8 1730 1752 [mm9:12:71345624-71345646:-] 0.6427 120 6 -8.59 -0.1238 MIMAT0000515 mmu-miR-30d 94090 Trim9 gaaggucagccccuaCAAAUGu |||||| gacuuguaacaaauaGUUUACa 2 8 1731 1752 [mm9:12:71345624-71345645:-] 0.6427 120 6 -9.10 -0.1238 MIMAT0000526 mmu-miR-15a 94090 Trim9 guGUUUGGUAAU-ACAC-GACGAu || ||||| : |||| ||||| aaCACACCAUCGCUGUGUCUGCUc 2 21 1149 1172 [mm9:12:71346204-71346227:-] 0.5728 135 0 -20.80 -0.1657 MIMAT0000534 mmu-miR-26b 94090 Trim9 uggaUAGGACUUAAUGA-ACUu ||: ||| |||| ||| uuuaAUUAAGAACUACUAUGAu 2 18 704 725 [mm9:12:71346651-71346672:-] 0.5519 121 0 -6.49 -0.3046 MIMAT0000536 mmu-miR-29c 94090 Trim9 auUGGCUAAAGU---UUA-CCACGAu ||| | ||:| ||| |||||| gaACCUAAUUUAUUGAAUGGGUGCUa 2 21 1555 1580 [mm9:12:71345796-71345821:-] 0.6427 127 6 -17.18 -0.7709 MIMAT0000538 mmu-miR-31 94090 Trim9 gucgauacggUCGU-AGAACGGa ||:: ||||||| ugacaucuagAGUGUUCUUGCCc 2 13 475 497 [mm9:12:71346879-71346901:-] 0.5455 143 7 -15.31 -0.4021 MIMAT0000538 mmu-miR-31 94090 Trim9 guCGAUACGGUCG-UAGA-ACGGa |||:||:| || ||| |||| ucGCUGUGUCUGCUCUCUGUGCCu 2 21 1158 1181 [mm9:12:71346195-71346218:-] 0.5728 131 0 -24.69 -0.2081 MIMAT0000542 mmu-miR-34a 94090 Trim9 ugUUGGUCGAU--UCUGUGACGGu | |:| ||| |:||||||| uuACCUACCUACCUGGCACUGCCa 2 21 350 373 [mm9:12:71347003-71347026:-] 0.5555 155 7 -23.38 -0.3142 MIMAT0000559 mmu-miR-326 94090 Trim9 ugACCUCCUUCCCGGGUCUCc ||| || | ||||||| gcUGGUAUAA-GACCCAGAGu 2 20 6 25 [mm9:12:71349131-71349150:-] 0.5235 149 7 -22.67 -0.1286 MIMAT0004642 mmu-miR-330 94090 Trim9 cgGAUUCUGUGUCCGGGUCUCu ||:: |:| || ||||||| agCUGGUAUA-AGACCCAGAGu 2 21 5 25 [mm9:12:71349131-71349151:-] 0.5235 158 7 -20.74 -0.1286 MIMAT0000590 mmu-miR-342-3p 94090 Trim9 ugcccacgcuaaagaCACACUCu ||||||| aggcacuuaucagaaGUGUGAGc 2 9 222 244 [mm9:12:71348912-71348934:-] 0.5007 140 7 -13.41 -0.7591 MIMAT0000609 mmu-miR-351 94090 Trim9 guccGAGUUUCCCGAGGA-GUCCCu :|||| | | :|| ||||| uuuaUUCAACAGCCAUCUGCAGGGc 2 21 360 384 [mm9:12:71348772-71348796:-] 0.5221 124 0 -17.79 -0.2413 MIMAT0000663 mmu-miR-218 94090 Trim9 uguaccaaucuAGUUCGUGUu | ||||||| uuaauacaaccUGAAGCACAa 2 11 574 594 [mm9:12:71346782-71346802:-] 0.5455 142 7 -10.06 -0.5004 MIMAT0000667 mmu-miR-33 94090 Trim9 acgUUACGUUGAUGU-UACGUg | | ||||||:| ||||| ugaACUACAACUAUAGAUGCAu 2 19 1755 1776 [mm9:12:71345600-71345621:-] 0.6158 122 0 -16.59 -0.1189 MIMAT0000668 mmu-miR-211 94090 Trim9 uccguuUCCUACUGUUUC-CCUu :|||||: |||| ||| agaaguGGGAUGGGAAAGUGGAc 2 17 1443 1465 [mm9:12:71345911-71345933:-] 0.5710 128 0 -18.46 -0.2274 MIMAT0000669 mmu-miR-221 94090 Trim9 cuuuGGGUCGUC--UGUUACA-UCGa |::||||| |::|||| ||| cuucCUUAGCAGAAAUGAUGUCAGCa 2 20 985 1010 [mm9:12:71346366-71346391:-] 0.5774 130 0 -19.10 -0.7744 MIMAT0000671 mmu-miR-224 94090 Trim9 uugcCUUGGUGAUCACUGAAu ||::: |||||||||| guuaGAGUU-CUAGUGACUUg 2 18 1717 1736 [mm9:12:71345640-71345659:-] 0.6427 159 7 -21.07 -0.7558 MIMAT0000671 mmu-miR-224 94090 Trim9 uugccuugguGAUCACUGAAu :|:||||||| cgaucauguuUUGGUGACUUa 2 12 332 352 [mm9:12:71347024-71347044:-] 0.5495 147 7 -16.04 -0.5184 MIMAT0000673 mmu-miR-181b 94090 Trim9 ugggUGGCUGUCGUUACUUACAa :|| || | ||||||| acaaGCCUUAAGAAUUGAAUGUu 2 20 1038 1060 [mm9:12:71346316-71346338:-] 0.5774 151 7 -16.32 -0.9839 MIMAT0000674 mmu-miR-181c 94090 Trim9 ugaguggcuguccAACUUACAa |||||||| caagccuuaagaaUUGAAUGUu 2 10 1039 1060 [mm9:12:71346316-71346337:-] 0.5774 145 7 -12.57 -0.9839 MIMAT0000677 mmu-miR-7a 94090 Trim9 uguUGUUUUAGUGAUCAGAAGGu |::|| | || ||||||| uucAUGAACACCCU-GUCUUCCu 2 21 758 779 [mm9:12:71346597-71346618:-] 0.5547 154 7 -14.89 -0.3660 MIMAT0000677 mmu-miR-7a 94090 Trim9 ugUUGUUUUAGUGAU-CAG-AAGGu | :||||| | | ||| |||| guACUAAAAUAAAAAGGUCGUUCCu 2 22 1796 1820 [mm9:12:71345556-71345580:-] 0.6158 124 0 -10.80 -0.3766 MIMAT0000678 mmu-miR-7b 94090 Trim9 uguuGUUUUAGU-GUUCAGAAGGu || :| || | ||||||| uguuCAUGAACACCCUGUCUUCCu 2 20 756 779 [mm9:12:71346597-71346620:-] 0.5547 150 7 -14.81 -0.3890 MIMAT0000678 mmu-miR-7b 94090 Trim9 ugUUGUUUUAGUGUU-CAG-AAGGu | :||||| | || ||| |||| guACUAAAAUAAAAAGGUCGUUCCu 2 22 1796 1820 [mm9:12:71345556-71345580:-] 0.6158 132 0 -13.64 -0.3766 MIMAT0004745 mmu-miR-384-5p 94090 Trim9 uguAACGGAUCCUUAACAAAUGu ||| : | ||| |||||| gacUUG-UAACAAAUAGUUUACa 2 21 1731 1752 [mm9:12:71345624-71345645:-] 0.6427 126 6 -10.43 -0.1238 MIMAT0001092 mmu-miR-376b 94090 Trim9 uucacCUACAAGGAG-AUACUa ||| | ||| ||||| ucaauGAUUUGACUCAUAUGAc 2 17 671 692 [mm9:12:71346684-71346705:-] 0.5519 120 0 -8.88 -0.7919 MIMAT0001542 mmu-miR-449a 94090 Trim9 ugGUCGAUUGUUAUGUGACGGu :| ||| | : :||||||| ccUACCUACCUG-GCACUGCCa 2 21 353 373 [mm9:12:71347003-71347023:-] 0.5555 150 7 -19.69 -0.3142 MIMAT0003128 mmu-miR-485 94090 Trim9 cuuaaGUAGUGCCGGUCGGAGa | |: | :||||||| ccgccCUUUCCCAUCAGCCUCu 2 18 124 145 [mm9:12:71347231-71347252:-] 0.5239 145 7 -16.14 -0.2127 MIMAT0003168 mmu-miR-543 94090 Trim9 uucuucacguggcGCUUACAAa :||||||| aagccuuaagaauUGAAUGUUa 2 10 1040 1061 [mm9:12:71346315-71346336:-] 0.5774 141 7 -7.85 -1.1547 MIMAT0003172 mmu-miR-542-3p 94090 Trim9 aaagucaauAGUUA-GACAGUGu ||| | ||||||| cuccaucgcUCACUGCUGUCACa 2 14 1195 1217 [mm9:12:71346159-71346181:-] 0.5681 148 7 -16.02 -0.2329 MIMAT0003182 mmu-miR-494 94090 Trim9 cuccaaaGGGCA-CAUACAAAGu ||| | ||||||| guagacaCCCUUCAGAUGUUUCc 2 16 1310 1332 [mm9:12:71346044-71346066:-] 0.5696 142 7 -12.15 -0.1208 MIMAT0003453 mmu-miR-497 94090 Trim9 auGUUUGGU-GUCACAC-GACGAc || |||| |: |||| ||||| aaCACACCAUCGCUGUGUCUGCUc 2 21 1149 1172 [mm9:12:71346204-71346227:-] 0.5728 135 0 -21.70 -0.1641 MIMAT0003456 mmu-miR-495 94090 Trim9 uuCUUCACGUGGU-ACAAACAAa |::| |: ::: |||||||| guGGGGGGUUUUGUUGUUUGUUu 2 21 262 284 [mm9:12:71347092-71347114:-] 0.5495 151 7 -14.06 -0.9739 MIMAT0003460 mmu-miR-449c 94090 Trim9 ggUCGAUCGUUACGUGACGGa | ||| | : |||||||| cuACCUACCUG-GCACUGCCa 2 20 354 373 [mm9:12:71347003-71347022:-] 0.5615 153 7 -18.10 -0.3233 MIMAT0003482 mmu-miR-499 94090 Trim9 uuUGUAGUGACGUUCAGAAUu :|:|| | | |||||||| ugGCGUC-CAG-AAGUCUUAa 2 20 559 577 [mm9:12:71346799-71346817:-] 0.5455 151 7 -15.60 -0.4496 MIMAT0003780 mmu-miR-490 94090 Trim9 gucguaccucAGGAGGUCCAAc ||| ||||||| auuaaauccaUCCCCCAGGUUa 2 13 1699 1720 [mm9:12:71345656-71345677:-] 0.6427 152 7 -15.33 -0.6022 MIMAT0004324 mmu-miR-181d 94090 Trim9 ugGGUGGCUGUUGUU-ACUUACAa | | | :|| || ||||||| aaCAAGCCUUAAGAAUUGAAUGUu 2 22 1037 1060 [mm9:12:71346316-71346339:-] 0.5774 152 7 -16.36 -0.9809 MIMAT0005447 mmu-miR-449b 94090 Trim9 cgGUCGAUUG-UUGUGACGGa :| ||| | ::||||||| ccUACCUACCUGGCACUGCCa 2 19 353 373 [mm9:12:71347003-71347023:-] 0.5555 153 7 -18.14 -0.3142 MIMAT0004936 mmu-miR-873 94090 Trim9 uccucugAGUGUUCAAGGACg || |::||||||| cugucugUCUCGGGUUCCUGu 2 15 1589 1609 [mm9:12:71345767-71345787:-] 0.6427 154 7 -18.71 -0.1549 MIMAT0004936 mmu-miR-873 94090 Trim9 uccucugaguguuCAAGGACg ||||||| aaauaaaaaggucGUUCCUGg 2 9 1802 1822 [mm9:12:71345554-71345574:-] 0.6158 140 7 -11.50 -0.3609 MIMAT0004941 mmu-miR-544 94090 Trim9 cucgaacgAUU-UUUAC-GUCUUa ||: ||||| ||||| uagaauaaUAGUAAAUGACAGAAg 2 15 1424 1447 [mm9:12:71345929-71345952:-] 0.5710 121 0 -9.58 -0.4092 MIMAT0004943 mmu-miR-653 94090 Trim9 guCAUCU---CUAAC-AAAGUUGUg ||||| || || ||||||| aaGUAGACCUGAAUGACUUCAACAg 2 20 139 163 [mm9:12:71348993-71349017:-] 0.5246 153 7 -14.62 -0.2712 MIMAT0004943 mmu-miR-653 94090 Trim9 gucaucucuAACAAAGUUGUg || ||||||| ucucgccccUUUAUUCAACAg 2 13 351 371 [mm9:12:71348785-71348805:-] 0.5221 144 7 -6.61 -0.1649 MIMAT0005850 mmu-miR-1192 94090 Trim9 uuaaaCCAGACAAACAAACAAa |||:| ||||||||| uggggGGUUUUGUUGUUUGUUu 2 18 263 284 [mm9:12:71347092-71347113:-] 0.5495 165 7 -16.85 -0.9615

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G055576 Trim9 Mus musculus 94090 19536157 0 0 R45544; MOUSE$TRIM9_01; Binding factors: mmu-miR-34a-5p , mmu-miR-34b-5p , mmu-miR-34c-5p , mmu-miR-449a-5p , mmu-miR-449b , mmu-miR-449c-5p // 0 0 R45556; MOUSE$TRIM9_02; Binding factors: mmu-miR-221-3p , mmu-miR-222-3p // 0 0 R45557; MOUSE$TRIM9_03; Binding factors: mmu-miR-128-3p , mmu-miR-27a-3p , mmu-miR-27b-3p // 0 0 R45563; MOUSE$TRIM9_05; Binding factors: mmu-miR-103-3p , mmu-miR-107-3p , mmu-miR-15a-5p , mmu-miR-15b-5p , mmu-miR-16-5p , mmu-miR-1907 , mmu-miR-195a-5p , mmu-miR-322-5p , mmu-miR-497a-5p , mmu-miR-503-5p // 0 0 R45576; MOUSE$TRIM9_06; Binding factors: mmu-miR-181a-5p , mmu-miR-181b-5p , mmu-miR-181c-3p , mmu-miR-181d-5p // 0 0 R45618; MOUSE$TRIM9_07; Binding factors: mmu-miR-124-3p // 0 0 R45620; MOUSE$TRIM9_08; Binding factors: mmu-miR-105 , mmu-miR-106a-5p , mmu-miR-106b-5p , mmu-miR-17-5p , mmu-miR-20a-5p , mmu-miR-20b-5p , mmu-miR-290a-3p , mmu-miR-291a-3p , mmu-miR-291b-3p , mmu-miR-292a-3p , mmu-miR-294-3p , mmu-miR-295-3p , mmu-miR-302a-3p , mmu-miR-302b-3p , mmu-miR-302c-3p , mmu-miR-302d-3p , mmu-miR-467a-5p , mmu-miR-467b-5p , mmu-miR-467c-5p , mmu-miR-467d-5p , mmu-miR-93-5p // 0 0 R45631; MOUSE$TRIM9_09; Binding factors: mmu-miR-125a-5p , mmu-miR-125b-5p , mmu-miR-351-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Trim9 mmu-miR-29bstar beg:648 end:666 pic:3' ATTTGGTGGTATAC-TTTGGTCG 5'& |||.. | ||||||| &5' -----CACTGG--GAAAACCAG- 3' Trim9 mmu-miR-218 beg:584 end:595 pic:3' TGTACCAATCTAGTTCGTGTT 5'& |||||||| &5' -------------AAGCACAA 3' Trim9 mmu-miR-199a-5p beg:597 end:613 pic:3' CTTGTCCATCAGACT-TGTGACCC 5'& || ||||||| &5' ----------TCGGCTACACTGG- 3' Trim9 mmu-miR-199bstar beg:597 end:613 pic:3' CTTGTCCATCAGATT-TGTGACCC 5'& || ||||||| &5' ----------TCGGCTACACTGG- 3' Trim9 mmu-miR-1904 beg:981 end:998 pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& |||.|||. ||||||| &5' CCTTCCTT------AGCAGAA- 3' Trim9 mmu-miR-374star beg:567 end:585 pic:3' GAGCCTGTTACTATTATGTTGG 5'& |.| |||||||||| &5' -------AGTCTTAATACAACC 3' Trim9 mmu-miR-466d-5p beg:877 end:896 pic:3' GTACATGTACATGCGTGTGTGT 5'& |.| || || ||||||| &5' ----TGC-TGAACCCACACAC- 3' Trim9 mmu-miR-759 beg:890 end:900 pic:3' CAGTTTTAACAAACGTGAGACG 5'& ||||||| &5' --------------CACTCTG- 3' Trim9 mmu-miR-34b-5p beg:355 end:373 pic:3' TGTTAGTCGATTAA-TGTGACGGA 5'& ||| .||||||| &5' --------CTACCTGGCACTGCC- 3' Trim9 mmu-miR-34c beg:355 end:373 pic:3' CGTTAGTCGATTGA-TGTGACGGA 5'& ||| || .||||||| &5' --------CTACCTGGCACTGCC- 3' Trim9 mmu-miR-3470b beg:539 end:555 pic:3' GGTCGGACCAGATGTCTCACT 5'& ||| .||||||| &5' -------GGTGAGCAGAGTG- 3' Trim9 mmu-miR-1962 beg:129 end:146 pic:3' TACACAGGGTCACGGTCGGAGA 5'& ||||| .|||||||| &5' -----TCCCA---TCAGCCTCT 3' Trim9 mmu-miR-1962 beg:46 end:60 pic:3' TACACAGGGTCACGGTCGGAGA 5'& |||| ||||||| &5' -------CCAG---CAGCCTC- 3' Trim9 mmu-miR-145star beg:1409 end:1419 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||||| &5' --------------CCAGGAA- 3' Trim9 mmu-miR-490 beg:1706 end:1720 pic:3' GTCGTACCTCAGGAGGTCCAAC 5'& ||| ||||||| &5' ----------TCCCCCAGGTT- 3' Trim9 mmu-miR-1899 beg:1152 end:1163 pic:3' CCTTCGTCTAAGCCGGTAGCGA 5'& |||||||| &5' --------------CCATCGCT 3' Trim9 mmu-miR-1899 beg:1188 end:1205 pic:3' CCTTCGTCTAAGCCGGTAGCGA 5'& || |||||||| &5' -------GAGACT-CCATCGCT 3' Trim9 mmu-miR-2134 beg:842 end:853 pic:3' CGTGGGGCAAAGGGTTCTG 5'& |||||||| &5' -----------CCCAAGAC 3' Trim9 mmu-miR-465a-3p beg:491 end:503 pic:3' AGATGAATCTTTCCGGGACTAG 5'& ||||||||. &5' -------------GCCCTGATT 3' Trim9 mmu-miR-465b-3p beg:491 end:503 pic:3' AGATGAATCTTTCCGGGACTAG 5'& ||||||||. &5' -------------GCCCTGATT 3' Trim9 mmu-miR-465c-3p beg:491 end:503 pic:3' AGATGAATCTTTCCGGGACTAG 5'& ||||||||. &5' -------------GCCCTGATT 3' Trim9 mmu-miR-24 beg:1399 end:1415 pic:3' GACAAGGACGACTTGACTCGGT 5'& |||| ||||||||| &5' ---TTCC------ACTGAGCCA 3' Trim9 mmu-miR-542-3p beg:1201 end:1218 pic:3' AAAGTCAATAGTTA-GACAGTGT 5'& ||| |||||||| &5' ---------TCACTGCTGTCACA 3' Trim9 mmu-miR-542-3p beg:955 end:972 pic:3' AAAGTCAATAGTTA-GACAGTGT 5'& .|| ||||||| &5' --------GTCTCTGCTGTCAC- 3' Trim9 mmu-miR-1953 beg:921 end:939 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& || .|||||||| &5' ------CCCAAT-GCTTTCCCA 3' Trim9 mmu-miR-340-3p beg:22 end:39 pic:3' CGATATTTCATTGACTCTGCCT 5'& || |||||||||| &5' --------GTCCCTGAGACGGA 3' Trim9 mmu-miR-149 beg:1402 end:1417 pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& ||| |||||||. &5' -----------CACTGAGCCAGG 3' Trim9 mmu-miR-675-3p beg:1765 end:1780 pic:3' TGACTCGCCAATCC-CGTATGTC 5'& ||| ||||||| &5' ----------TAGATGCATACA- 3' Trim9 mmu-miR-684 beg:646 end:663 pic:3' AACTGAACTTCCCTTTTGA 5'& |.| |||||||| &5' --GGCACT--GGGAAAAC- 3' Trim9 mmu-miR-1274a beg:1350 end:1367 pic:3' ACCGCGGACTTGTC-CCTGGACT 5'& ||||. ||||||| &5' --------GAACGTAGGACCTG- 3' Trim9 mmu-miR-148a beg:0 end:23 pic:3' TGTTTCAA--GACATCA-CGTGACT 5'& ..|| ||||.| ||||||. &5' ---GGGTGTGCTGTGGAGGCACTGG 3' Trim9 mmu-miR-148b beg:0 end:23 pic:3' TGTTTCAA--GACACTA-CGTGACT 5'& ..|| |||||. ||||||. &5' ---GGGTGTGCTGTGGAGGCACTGG 3' Trim9 mmu-miR-152 beg:0 end:23 pic:3' GGTTCAA--GACAGTA-CGTGACT 5'& ..|| |||| . ||||||. &5' --GGGTGTGCTGTGGAGGCACTGG 3' Trim9 mmu-miR-1960 beg:2 end:23 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& |. || | .||||||| &5' -GTGCTGTGGA---GGCACTGG 3' Trim9 mmu-miR-1960 beg:350 end:371 pic:3' TCGGGAGAAGATTG-TCGTGACC 5'& ||| ||| | .|||||| &5' ---CCTAC-CTACCTGGCACTG- 3' Trim9 mmu-miR-449c beg:351 end:373 pic:3' GGTCGATCGTTACGTGACGGA 5'& |.| ||| | |||||||| &5' CTACCTACCTG-GCACTGCC- 3' Trim9 mmu-miR-148a beg:359 end:371 pic:3' TGTTTCAAGACATCACGTGACT 5'& ||| |||||| &5' --------CTG----GCACTG- 3' Trim9 mmu-miR-152 beg:359 end:371 pic:3' GGTTCAAGACAGTACGTGACT 5'& ||| |||||| &5' -------CTG----GCACTG- 3' Trim9 mmu-miR-148a beg:634 end:656 pic:3' TGTTTCAAGACATCACGTGACT 5'& ||| || || ||| ||||||. &5' ACATAGG-CTCTAG-GCACTGG 3' Trim9 mmu-miR-148b beg:634 end:656 pic:3' TGTTTCA-AGACACTACGTGACT 5'& ||| || ||| ||||||. &5' ACATAGGCTCTAG---GCACTGG 3' Trim9 mmu-miR-152 beg:637 end:656 pic:3' GGTTCAAGACAGTACGTGACT 5'& .|.| ||| ||||||. &5' -TAGGCTCTAG---GCACTGG 3' Trim9 mmu-miR-1960 beg:639 end:657 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& .||.|| .||||||| &5' GGCTCTA-------GGCACTGG 3' Trim9 mmu-miR-1960 beg:709 end:736 pic:3' TCGGGAGAAGATTG---TCGTGACC 5'& || || |.|. .|||||| &5' AGAACTACTATGATCCAGGCACTG- 3' Trim9 mmu-miR-148b beg:716 end:736 pic:3' TGTTTCAAGACACTA----CGTGACT 5'& || |||| |||||| &5' --------CTATGATCCAGGCACTG- 3' Trim9 mmu-miR-449c beg:723 end:738 pic:3' GGTCGATCGTTACGTGACGGA 5'& |||| ||||||.. &5' CCAG--------GCACTGTT- 3' Trim9 mmu-miR-152 beg:723 end:747 pic:3' GGTTCAAGAC-AGTAC-GTGACT 5'& |||.| ||| ||| | |||| &5' CCAGGCACTGTTCAGGACACT-- 3' Trim9 mmu-miR-547 beg:905 end:924 pic:3' GAGTGAGTTTCTACATGGTTC 5'& ||| ||.| ||||||| &5' --CAC-CAGACAAGTACCAA- 3' Trim9 mmu-miR-7a beg:763 end:779 pic:3' TGTTGTTTTAGTGAT-CAGAAGGT 5'& ||| ||||||| &5' ----------CACCCTGTCTTCC- 3' Trim9 mmu-miR-7b beg:763 end:779 pic:3' TGTTGTTTTAGTGTT-CAGAAGGT 5'& ||| ||||||| &5' ----------CACCCTGTCTTCC- 3' Trim9 mmu-miR-873 beg:1593 end:1610 pic:3' TCCTCTGAGTGTTCAAGGACG 5'& || |..|||||||. &5' -------TCTCGGGTTCCTGT 3' Trim9 mmu-miR-873 beg:1812 end:1822 pic:3' TCCTCTGAGTGTTCAAGGACG 5'& ||||||| &5' -------------GTTCCTG- 3' Trim9 mmu-miR-1192 beg:265 end:285 pic:3' TTAAACCAGACAAACAAACAAA 5'& |||.| |||||||||| &5' -----GGTTTTGTTGTTTGTTT 3' Trim9 mcmv-miR-M23-2 beg:1703 end:1716 pic:3' GGCGAACTGGCTCCGGGGGTA 5'& || |||||| &5' --------CCAT--CCCCCA- 3' Trim9 mcmv-miR-m59-1 beg:1190 end:1212 pic:3' GACTGCC--AGCTCCGTGACGATT 5'& ||| ||| |||||||. &5' --GACTCCATCGCT-CACTGCTG- 3' Trim9 mghv-miR-M1-3 beg:214 end:238 pic:3' TTCGCGTTGAGGAC----GAGTGGAG 5'& ||| | ||| |||||.|| &5' ---CGCTCC-CCTTTGTTCTCACTTC 3' Trim9 mghv-miR-M1-8 beg:1569 end:1580 pic:3' CTGGTTTGGGGGTCACTCACGA 5'& ||.||||| &5' --------------TGGGTGCT 3' Trim9 mmu-let-7c beg:1119 end:1144 pic:3' TTGGTATGTTGGATGATGGAGT 5'& ||||| || |..||| ||||| &5' AACCACACCATTTACATCCTCA 3' Trim9 mmu-miR-101a beg:1010 end:1031 pic:3' AAGTCAAT-AGT-GTCATGACAT 5'& |||| ||| .|||.||||. &5' ----GTTACTCATTAGTGCTGTG 3' Trim9 mmu-miR-101a beg:2 end:12 pic:3' AAGTCAATAGTGTCATGACAT 5'& ||.||||. &5' -------------GTGCTGTG 3' Trim9 mmu-miR-101b beg:1015 end:1031 pic:3' AAGTCGATAGT-GTCATGACAT 5'& ||| .|||.||||. &5' --------TCATTAGTGCTGTG 3' Trim9 mmu-miR-105 beg:540 end:562 pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& . |||| | |||||||| &5' ---GTGAGCAGA-GTGCACTTGG 3' Trim9 mmu-miR-106a beg:1458 end:1475 pic:3' GATGGACGTGACAATCGTGAAAC 5'& || || |||.||||| &5' -----TGGAC----AGCGCTTTG 3' Trim9 mmu-miR-10a beg:607 end:627 pic:3' GTGTTTAAGCCTAGA--TGTCCCAT 5'& .|| || .||||||| &5' --------TGGCTCACGGCAGGGTA 3' Trim9 mmu-miR-10b beg:607 end:627 pic:3' GTGTTTAAGCCAAGA--TGTCCCAT 5'& .|| || .||||||| &5' --------TGGCTCACGGCAGGGTA 3' Trim9 mmu-miR-1188 beg:893 end:912 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& .|||||. |||||||| &5' -TCTGGCTA----TCACACCA 3' Trim9 mmu-miR-1188 beg:1135 end:1158 pic:3' AGGA--CCGGGTTGGAGTGTGGT 5'& |||| || ||| ||||||| &5' TCCTCAGGA-CAAA--CACACCA 3' Trim9 mmu-miR-1188 beg:927 end:947 pic:3' AGGACCGGGTTGGA-GTGTGGT 5'& ||.. || |||||.| &5' -----GCTTTCCCACCACACTA 3' Trim9 mmu-miR-1191 beg:1609 end:1635 pic:3' ATCCCGATGTAT--------CATTCTGAC 5'& ||||| ||..|||| &5' -----CTACAGAACACTGTTGTGGGACT- 3' Trim9 mmu-miR-1193 beg:1363 end:1381 pic:3' CTATCATTTTGCCCACTGGAT 5'& ||. . |||||||.| &5' ----GTGT-GGGGGTGACTT- 3' Trim9 mmu-miR-1194 beg:1001 end:1023 pic:3' TCCTAGATCGT--CAATGAGTAAG 5'& .|| |||| |||||||||| &5' ---GTC-AGCATTGTTACTCATT- 3' Trim9 mmu-miR-122 beg:881 end:899 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& .||| ||| |||||||. &5' -GAAC-CCA----CACACTCT- 3' Trim9 mmu-miR-1306 beg:1091 end:1114 pic:3' GTAGTGGTGGT-CTCGGTTGCA 5'& .|||||||| |.||| .| &5' -GTCACCACCCCGGGCCTCTG- 3' Trim9 mmu-miR-142-3p beg:823 end:844 pic:3' AGGTATTTCA-TCCTTTGTGATGT 5'& |.| |||| ||||||||. &5' TTCT--AAGTAAGGAAACAT---- 3' Trim9 mmu-miR-144 beg:1521 end:1540 pic:3' TCATGTAGTAGATATGACAT 5'& .|| |||| |||.| .|| &5' GGT-CATC-TCTGTCTTG-- 3' Trim9 mmu-miR-145star beg:659 end:668 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||||. &5' --------------CCAGGAG- 3' Trim9 mmu-miR-145star beg:419 end:437 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||| |||.||||. &5' -AAGATG-----TTCTAGGAG- 3' Trim9 mmu-miR-150 beg:523 end:544 pic:3' GTGACC-ATGTTCCCAACCCTCT 5'& ||| ||| |||||||. &5' ---TGGCTACTTC--TTGGGAGG 3' Trim9 mmu-miR-150star beg:901 end:923 pic:3' GATAGGG-GGTCCGGACATGGTC 5'& |||| |||| | |||||| &5' -TATCACACCAGACAAGTACCA- 3' Trim9 mmu-miR-150star beg:1590 end:1613 pic:3' GATAGG--GGGTCC--GGACATGGTC 5'& .||. |.|.|| ||||| | &5' --GTCTGTCTCGGGTTCCTGTGTC-- 3' Trim9 mmu-miR-150star beg:1779 end:1802 pic:3' GATAGG-GGGTCCGGACATGGTC 5'& ||| . || ||||||.| &5' -TATAGATGCATA-CTGTACTA- 3' Trim9 mmu-miR-150star beg:1705 end:1730 pic:3' GATAGGGGGTCCGGA--CATGGTC 5'& ||||||||||.. || |.|| &5' --ATCCCCCAGGTTAGAGTTCTAG 3' Trim9 mmu-miR-15bstar beg:660 end:682 pic:3' ATCTCGTCGTTTA--TTACTAAGC 5'& ||| |.| |||||||.| &5' -----CAGGAGACTCAATGATTTG 3' Trim9 mmu-miR-181a beg:1039 end:1061 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& .|| || ||||||||| &5' ----GCCTTAAGAATTGAATGTT 3' Trim9 mmu-miR-181b beg:1039 end:1061 pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& .|| || |||||||| &5' ----GCCTTAAGAATTGAATGTT 3' Trim9 mmu-miR-181c beg:1039 end:1061 pic:3' TGAGTGGCTGTCC-AACTTACAA 5'& .|| || ||||||||| &5' ----GCCTTAAGAATTGAATGTT 3' Trim9 mmu-miR-181d beg:1039 end:1061 pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& .||. || |||||||| &5' GCCTTAAGAAT----TGAATGTT 3' Trim9 mmu-miR-182 beg:355 end:376 pic:3' GCCACACTCAAGATGGTA----ACGGTTT 5'& ||||| ||||||| &5' -----------CTACCTGGCACTGCCAAA 3' Trim9 mmu-miR-184 beg:1517 end:1538 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& .|| .||| ||||.|||. &5' -TCCGGGTCA--TCTCTGTCT- 3' Trim9 mmu-miR-184 beg:1576 end:1595 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |||| ||||.|||. &5' -----TATCCTGTCTCTGTCT- 3' Trim9 mmu-miR-188-3p beg:1431 end:1453 pic:3' ACGTTTGGGACGTACACCCTC 5'& |.|||. |||||| &5' -GTAAATGACAGAAGTGGGA- 3' Trim9 mmu-miR-188-3p beg:1614 end:1633 pic:3' ACGTTTGGGACGTACACCCTC 5'& .||| |||. ||||||| &5' ---GAACACTGT-TGTGGGA- 3' Trim9 mmu-miR-188-3p beg:435 end:448 pic:3' ACGTTTGGGACGTACACCCTC 5'& ||| |||||| &5' ----------GCAGGTGGGA- 3' Trim9 mmu-miR-1892 beg:162 end:183 pic:3' TAGGAGGGAGGGCAG-GGGTTTA 5'& ||||||.|| || ||||.| &5' ---CTCCCTTCC-TCACCCAGA- 3' Trim9 mmu-miR-1904 beg:530 end:553 pic:3' GGAGGGAGGTCTCC--TCGTCTTG 5'& || .||. .|||| ||||||. &5' -CT-TCTTGGGAGGTGAGCAGAG- 3' Trim9 mmu-miR-190b beg:665 end:690 pic:3' TTGGGTTAT--AGTTT-GTATAGT 5'& .||.||||. | | ||||| &5' GACTCAATGATTTGACTCATAT-- 3' Trim9 mmu-miR-1929 beg:381 end:392 pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||||.||| &5' ---------------TCCTGGAA 3' Trim9 mmu-miR-1929 beg:767 end:784 pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||| ||| ||||.||| &5' --CTG-TCT------TCCTGGAA 3' Trim9 mmu-miR-1930 beg:0 end:17 pic:3' TGCGACGTC-CATGATACCTCCA 5'& .| ||.||.|||||| &5' -------GGTGTGCTGTGGAGG- 3' Trim9 mmu-miR-1935 beg:1517 end:1538 pic:3' TCTCTAGGCGGTC----GGAGACGGA 5'& || ||.| .|||||.|| &5' ------CCTCCGGGTCATCTCTGTCT 3' Trim9 mmu-miR-1938 beg:920 end:941 pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& ||| |.| ||||||| &5' -ACCCAA-TGCTT-TCCCACC- 3' Trim9 mmu-miR-1944 beg:1069 end:1088 pic:3' TTAGTCTTGAACTGTAAG-TCGTGTCTC 5'& |||| .||||||.| &5' ----------TGACCAGAAGGCACAGGG 3' Trim9 mmu-miR-1944 beg:177 end:199 pic:3' TTAGTC-TTGAACTGTAAGTCGTGTCTC 5'& ||| |||| ||| |||||||| &5' ---CAGAAACTCGACC----GCACAGAG 3' Trim9 mmu-miR-1949 beg:1809 end:1827 pic:3' TTGATACGACTGT-AGGACCATATC 5'& | |. |||||||||. &5' ---------GTCGTTCCTGGTATG- 3' Trim9 mmu-miR-1953 beg:116 end:137 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& ||||. | |||||||| &5' ---AAGCTCC-GCCCTTTCCCA 3' Trim9 mmu-miR-1959 beg:1126 end:1143 pic:3' GAGGTGACTCGATGTAGGGG 5'& |||. .|||||||.| &5' --CCAT----TTACATCCTC 3' Trim9 mmu-miR-1959 beg:1400 end:1422 pic:3' GAGGTGACTCGATGTAGGGG 5'& |||||||||| | . ||| &5' -TCCACTGAGCCAGGAACCC 3' Trim9 mmu-miR-1960 beg:978 end:1002 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& ||||||. .||.||| || &5' AGCCCTTCCTTAGCAGAAATG- 3' Trim9 mmu-miR-1966 beg:151 end:172 pic:3' CTGAGAGAGGACTCGG--TCGAGGGAA 5'& |||| || .|||||||| &5' ---------CTGAACCCAGGCTCCCTT 3' Trim9 mmu-miR-1967 beg:215 end:234 pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& |||||| .|.|||| &5' -------CTCCCCTTTGTTCTCA 3' Trim9 mmu-miR-1969 beg:1577 end:1595 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |.|| |||||..||| &5' ATCCT-------GTCTCTGTCT- 3' Trim9 mmu-miR-1969 beg:1313 end:1337 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |||| ||.|||.|.| &5' ACCCTTCAGAT-GTTTCCGTTT- 3' Trim9 mmu-miR-1969 beg:1709 end:1729 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |||| ||||.|| .||.| &5' -CCCAGGTTAGAG-TTCTA---- 3' Trim9 mmu-miR-196b beg:339 end:361 pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& . . || ||||||| &5' -TTGGTGACTTAC--CTACCTA 3' Trim9 mmu-miR-1981 beg:1823 end:1845 pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& |||| |||| |..||||. &5' GCCAATA--AAGC---GTTTTTAT 3' Trim9 mmu-miR-1981 beg:685 end:708 pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& .|.| |||| | ||..|||| &5' --TATGACTAATACAAGTTTTTA- 3' Trim9 mmu-miR-1982.1 beg:430 end:448 pic:3' GACACCCTCTTGTATCCCACTCT 5'& |||||.|| ||||.|| &5' -----GGAGAGCA---GGTGGGA 3' Trim9 mmu-miR-199a-3p beg:1194 end:1214 pic:3' ATTGGTTACACGTCTGATGACA 5'& ||| || |||.|||| &5' ---CCATC--GCTCACTGCTGT 3' Trim9 mmu-miR-199a-5p beg:638 end:658 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& |.||| ||| .||||||| &5' --ATAGGC--TCTAGGCACTGGG 3' Trim9 mmu-miR-199b beg:1194 end:1214 pic:3' ATTGGTTACACGTCTGATGACA 5'& ||| || |||.|||| &5' ---CCATC--GCTCACTGCTGT 3' Trim9 mmu-miR-199bstar beg:636 end:658 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |.||| ||||..||||||| &5' --ATAGGC--TCTAGGCACTGGG 3' Trim9 mmu-miR-200cstar beg:1614 end:1634 pic:3' GGTTTGTGACGACCCATTCTGC 5'& .|||||||.| ||..||| &5' --GAACACTGTT--GTGGGAC- 3' Trim9 mmu-miR-202-5p beg:1440 end:1458 pic:3' TTTCTTCATATACGTATCCTT 5'& ||||||. | ||.|||| &5' --AGAAGTGG--G-ATGGGAA 3' Trim9 mmu-miR-203star beg:706 end:721 pic:3' ACAACTTGACAGTTCTTGGTGA 5'& |.||||||.||| &5' ----------TTAAGAACTACT 3' Trim9 mmu-miR-20a beg:1458 end:1475 pic:3' GATGGACGTGATATTCGTGAAAT 5'& || || |||.||||. &5' -----TGGAC----AGCGCTTTG 3' Trim9 mmu-miR-20b beg:1458 end:1475 pic:3' GATGGACGTGATACTCGTGAAAC 5'& || || |||.||||| &5' -----TGGAC----AGCGCTTTG 3' Trim9 mmu-miR-214 beg:1161 end:1185 pic:3' TGACGGAC---AGACACGGACGACA 5'& ||.||| ||||||||||.| &5' --TGTCTGCTCTCTGTGCCTGTT-- 3' Trim9 mmu-miR-2141 beg:220 end:239 pic:3' TTGAAAAGACTGTGGAGGA 5'& |||| |||.||| &5' --CTTTGTTCTCACTTCC- 3' Trim9 mmu-miR-2145 beg:756 end:774 pic:3' TTGGTCCGGGCTGGGACGA 5'& .|| | | ||||||. &5' --TCATGAAC-ACCCTGT- 3' Trim9 mmu-miR-214 beg:1574 end:1597 pic:3' TGAC-GGACAGACACGGACGACA 5'& .|| ||||||| ||.|||. &5' GCTATCCTGTCTCTGTCTGT--- 3' Trim9 mmu-miR-2146 beg:973 end:991 pic:3' GTGTACCTTGGGAAGAGGTG 5'& |.|| ||.|||||| |. &5' CGCA--GAGCCCTTC-CT-- 3' Trim9 mmu-miR-218 beg:1068 end:1087 pic:3' TGTACCAATCTAGTTCGTGTT 5'& ||| ||| |.|||||. &5' --ATGACCAGA--AGGCACAG 3' Trim9 mmu-miR-224 beg:1713 end:1737 pic:3' TTGCCTTGGT---GATCACTGAAT 5'& || ||||||||||. &5' ---GGTTAGAGTTCTAGTGACTTG 3' Trim9 mmu-miR-224 beg:330 end:353 pic:3' TTGCCTTGGTG----ATCACTGAAT 5'& .|.||. |.|||||||| &5' -----GATCATGTTTTGGTGACTTA 3' Trim9 mmu-miR-24 beg:1666 end:1683 pic:3' GACAAGGACGACTTGACTCGGT 5'& ||| || .|||.||| &5' ----TCCA--TG-GCTGGGCC- 3' Trim9 mmu-miR-26bstar beg:430 end:443 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& |||||.|||| &5' ------------GGAGAGCAGG 3' Trim9 mmu-miR-2861 beg:144 end:169 pic:3' GGCG-GGCGGC---GGTCCGGGG 5'& |||| .| |.| ||||||.|| &5' CCGCATCACTGAACCCAGGCTCC 3' Trim9 mmu-miR-28 beg:1584 end:1608 pic:3' GAGTTATCTGACA---CTCGAGGAA 5'& ||| | |||| |.|.|||| &5' CTCT---GTCTGTCTCGGGTTCCT- 3' Trim9 mmu-miR-291a-3p beg:1452 end:1474 pic:3' CGTGTGTTTCACCT-TCGTGAAA 5'& . |||||||| |||.|||| &5' ----GGAAAGTGGACAGCGCTTT 3' Trim9 mmu-miR-295 beg:1447 end:1474 pic:3' TCTGAGTTTTCATCA-TCGTGAAA 5'& .||. .|||||.| |||.|||| &5' GGATGGGAAAGTGGACAGCGCTTT 3' Trim9 mmu-miR-298 beg:1570 end:1594 pic:3' CCCTTCTTGTCGGGA-GGAGACGG 5'& ||| .| .||| .|||||.| &5' GGGT---GCTATCCTGTCTCTGTC 3' Trim9 mmu-miR-29astar beg:650 end:674 pic:3' GACTTG--TGGTTTTCTTTAGTCA 5'& |||.. ||||..||| ||| &5' CTGGGAAAACCAGGAGAC-TCA-- 3' Trim9 mmu-miR-29astar beg:359 end:383 pic:3' GACT-TG-TGGTTTTCTTTAGTCA 5'& |||. || .|||||||||||. &5' CTGGCACTGCCAAAAGAAATT--- 3' Trim9 mmu-miR-29b beg:1564 end:1581 pic:3' TTGTGACTAAAGTTTA-CCACGAT 5'& | ||| ||||||| &5' ----------TTGAATGGGTGCTA 3' Trim9 mmu-miR-29b beg:1527 end:1545 pic:3' TTGTGACTAAAGTTTACCACGAT 5'& | ||| || |||||.| &5' --CTCTG---TCT--TGGTGTT- 3' Trim9 mmu-miR-29bstar beg:447 end:458 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& |||.|||| &5' -------------GAAGCCAG- 3' Trim9 mmu-miR-29c beg:1564 end:1581 pic:3' ATTGGCTAAAGTTTA-CCACGAT 5'& | ||| ||||||| &5' ---------TTGAATGGGTGCTA 3' Trim9 mmu-miR-302bstar beg:1709 end:1725 pic:3' TCTTTCGTAAGGGTACAATTTCA 5'& |||| ||||.||| &5' ----------CCCAGGTTAGAGT 3' Trim9 mmu-miR-302c beg:4 end:21 pic:3' GGTGACTTTGTACCTTCGTGAA 5'& .||| ||||.||||| &5' --GCTG-----TGGAGGCACT- 3' Trim9 mmu-miR-302c beg:634 end:655 pic:3' GGTGACTTTGTA-CC----TTCGTGAA 5'& .|||| || |.||||| &5' -------GACATAGGCTCTAGGCACT- 3' Trim9 mmu-miR-302d beg:1449 end:1473 pic:3' TGTGAGTTTGTACCT-TCGTGAAT 5'& |. .|| .|||| |||.||| &5' --ATGGGAAAGTGGACAGCGCTT- 3' Trim9 mmu-miR-3099star beg:71 end:93 pic:3' GTTCCCGAC-CTTCCTTCGACC 5'& ||||| || |||| |||||| &5' CAAGGA-TGAGAAG--AGCTGG 3' Trim9 mmu-miR-30c-1star beg:117 end:137 pic:3' CCTCATTTGT--TGGGAGAGGGTC 5'& ||.| .||||.||||| &5' -----AAGCTCCGCCCTTTCCCA- 3' Trim9 mmu-miR-30c-1star beg:923 end:939 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& |||. ||.||||| &5' --------CAATGCTTTCCCA- 3' Trim9 mmu-miR-30c-2star beg:116 end:137 pic:3' TCTCATTTGT--CGGAAGAGGGTC 5'& ||.| ||| |.||||| &5' -----AAGCTCCGCCCTTTCCCA- 3' Trim9 mmu-miR-31 beg:482 end:509 pic:3' GTCGAT---ACGGT-CGTAGAACGGA 5'& ||. |||| | |||||.| &5' -AGTGTTCTTGCCCTGATTCTTGTC- 3' Trim9 mmu-miR-327 beg:1126 end:1146 pic:3' TAGG-AGTACGGGGAGTTCA 5'& || |. .|||||.| &5' --CCATTTACATCCTCAGG- 3' Trim9 mmu-miR-330 beg:25 end:49 pic:3' CGGATTCTG--TGTCCGGGTCTCT 5'& |||.|||| ||| |||| ||| &5' -CCTGAGACGGACA-GCCCTGAG- 3' Trim9 mmu-miR-331-5p beg:337 end:357 pic:3' CCTAGGGACC-CTGGTATGGATC 5'& ...||| |||. |||||| &5' ----TTTTGGTGACT-TACCTA- 3' Trim9 mmu-miR-335-5p beg:394 end:415 pic:3' TGTAAAAAGCAATAACGAGAACT 5'& |||||| ||. |||.|||. &5' ---TTTTTC-TTGA-GCTTTTGG 3' Trim9 mmu-miR-339-5p beg:608 end:625 pic:3' GCACTCGAGGACCTCCTGTCCCT 5'& .|||| |.||||| &5' ----GGCTCAC----GGCAGGG- 3' Trim9 mmu-miR-342-3p beg:1348 end:1373 pic:3' TGCCCACGCTAAA--GACACACTCT 5'& ||| || |||||||.|. &5' --GGGAACGTAGGACCTGTGTGGGG 3' Trim9 mmu-miR-3473 beg:1680 end:1697 pic:3' CCGACTCGGTAGAGAGGT 5'& ||| ||..| |||||. &5' -GCT-AGTTA-CTCTCT- 3' Trim9 mmu-miR-34a beg:353 end:374 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||| |.|||||||| &5' ---ACCTACCT-GGCACTGCCA 3' Trim9 mmu-miR-34c beg:1199 end:1212 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& .|| ||||||. &5' -----------GCT-CACTGCT- 3' Trim9 mmu-miR-362-5p beg:59 end:81 pic:3' TAAGTGTGGATCCAAGGTTCCTAA 5'& |. || || ||||||| &5' ---CGGACAGTCGTA-CAAGGAT- 3' Trim9 mmu-miR-378star beg:724 end:743 pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& |||| ||| |||||| &5' ---CAGGCACTGT--TCAGGA- 3' Trim9 mmu-miR-383 beg:1365 end:1387 pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& |. . .|| | ||||||||. &5' -GTGGGGGTGA-CTTCTGATT- 3' Trim9 mmu-miR-384-3p beg:415 end:437 pic:3' TAACACTTGTTA----AAGATCCTTA 5'& |.||| ||||||||. &5' ------AGCAAAGATGTTCTAGGAG- 3' Trim9 mmu-miR-384-3p beg:1333 end:1355 pic:3' TAACACT-TGTTA-AAGATCCTTA 5'& ||| ||.| ||.||||.| &5' ----TGACACGAAGTTTTAGGGA- 3' Trim9 mmu-miR-412 beg:427 end:447 pic:3' GCCGATCACCTGGTCCACTT 5'& |||| || ||||||.. &5' ---CTAGGAGAGCAGGTGGG 3' Trim9 mmu-miR-432 beg:802 end:823 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& || || .| |||.|||| &5' --GCA-ACAAGTA-ACTTCAAG- 3' Trim9 mmu-miR-448 beg:781 end:801 pic:3' TACCCTGTAGGATGT----ATACGTT 5'& ||||.| ||||.|| &5' ---------CCTATATTCTTATGTAA 3' Trim9 mmu-miR-449a beg:349 end:374 pic:3' TGGTC-GATTGTTATGTGACGGT 5'& ||| ||| | .|||||||| &5' ACCTACCTACCTG-GCACTGCCA 3' Trim9 mmu-miR-449b beg:351 end:373 pic:3' CGGTCGATTG-TTGTGACGGA 5'& |.| ||| | ..||||||| &5' -CTACCTACCTGGCACTGCC- 3' Trim9 mmu-miR-449b beg:1607 end:1627 pic:3' CGGTCGATTGT--TGTGACGGA 5'& |. ||| ||||||.. &5' ----GTCTACAGAACACTGTT- 3' Trim9 mmu-miR-449c beg:1194 end:1212 pic:3' GGT--CGATCGTTACGTGACGGA 5'& ||| ||| ||||||. &5' CCATCGCT-------CACTGCT- 3' Trim9 mmu-miR-450b-5p beg:1478 end:1496 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& |||||| |||.||| &5' -----AGGAACCT-CTGTAAA- 3' Trim9 mmu-miR-452 beg:1478 end:1498 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& || ||||||.|||.| &5' -----AGGAACCTCTGTAAATA 3' Trim9 mmu-miR-452 beg:1101 end:1125 pic:3' CAGAGTCAAAGGAG------ACGTTTGT 5'& |.| |||| ||||||| &5' ----CGGG--CCTCTGAAGTTGCAAAC- 3' Trim9 mmu-miR-463 beg:1575 end:1598 pic:3' GATGGAATATACCACAGATAGT 5'& |||.| |.| |||||.|| &5' CTATCCTGTCTC-TGTCTGTC- 3' Trim9 mmu-miR-465a-5p beg:819 end:835 pic:3' AGTGTAGTCACGGTAAGATTTAT 5'& |. ||||||.|| &5' ----------GTTGTTCTAAGTA 3' Trim9 mmu-miR-465b-5p beg:815 end:835 pic:3' GTCTAGTCGTGGTAAGATTTAT 5'& ||| . .||||||.|| &5' ----TCAA-GTTGTTCTAAGTA 3' Trim9 mmu-miR-465c-5p beg:815 end:835 pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& ||| |. ||||||.|| &5' ----TCAA-GTTGTTCTAAGTA 3' Trim9 mmu-miR-467b beg:544 end:560 pic:3' GTATATGTACGTC---CGTGAATG 5'& |||| ||||||. &5' ---------GCAGAGTGCACTTG- 3' Trim9 mmu-miR-483star beg:1442 end:1464 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& ||| .|||| |||| ||||. &5' AAG-TGGGATGGGAA-AGTGG 3' Trim9 mmu-miR-484 beg:1206 end:1224 pic:3' TAGCCCTCCCCTGAC----TCGGACT 5'& .||| ||||||| &5' -----------GCTGTCACAGCCTGA 3' Trim9 mmu-miR-485 beg:134 end:146 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& .|||||||| &5' -------------TCAGCCTCT 3' Trim9 mmu-miR-493 beg:1207 end:1229 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& ||| ||||| |||.||| &5' -CTGT--CACAGCCTGACTTTC- 3' Trim9 mmu-miR-493 beg:615 end:636 pic:3' GGACCGTGTGTCA-TCCTGGAAGT 5'& |||| .|| ||||||||. &5' ---GGCAG--GGTAAGGACCTTT- 3' Trim9 mmu-miR-493 beg:91 end:112 pic:3' GGAC-CGTGTGTCATCCTGGAAGT 5'& ||| || |.| |.||||| &5' CCTCAGC-CGCC-----ATCTTCA 3' Trim9 mmu-miR-494 beg:264 end:286 pic:3' CTCCAAAGGGCACATACAAAGT 5'& |.|||||. . ||| |||||. &5' GGGGTTTTGT-TGTTTGTTTT- 3' Trim9 mmu-miR-495 beg:263 end:285 pic:3' TTCTTCACGTGGT-ACAAACAAA 5'& .|..| |. ||||||||| &5' -GGGGG-GTTTTGTTGTTTGTTT 3' Trim9 mmu-miR-496 beg:1385 end:1403 pic:3' CTCTAACCGGTACA-TTATGAGT 5'& |. ||| ||||||. &5' -------GTTGTGTAAATACTT- 3' Trim9 mmu-miR-499 beg:557 end:578 pic:3' TTTGTAGTGACGTTCAGAATT 5'& ..|.|| | | ||||||||| &5' -GGCGTC-CAG-AAGTCTTAA 3' Trim9 mmu-miR-511 beg:1070 end:1085 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& || ||.|||||| &5' --------GACCAGAAGGCA- 3' Trim9 mmu-miR-532-3p beg:1354 end:1375 pic:3' ACGTTC-GGAACCCACACCCTCC 5'& |.|.| ||| |||||||.| &5' -GTAGGACCT---GTGTGGGGG- 3' Trim9 mmu-miR-532-3p beg:259 end:270 pic:3' ACGTTCGGAACCCACACCCTCC 5'& |||||.|| &5' --------------GTGGGGGG 3' Trim9 mmu-miR-540-3p beg:892 end:903 pic:3' GGTCCTAGCTGGAGACTGGA 5'& |||||.|. &5' -----------CTCTGGCT- 3' Trim9 mmu-miR-540-3p beg:617 end:639 pic:3' GGTCCTAG--CTGGAGACTGGA 5'& ||||.| |||||.|||| &5' -CAGGGTAAGGACCTTTGAC-- 3' Trim9 mmu-miR-540-5p beg:616 end:637 pic:3' TGTCTCAGTC-TCCCA---CTGGGAAC 5'& |.| ||||| ||||.||| &5' -------CGGCAGGGTAAGGACCTTTG 3' Trim9 mmu-miR-665 beg:764 end:782 pic:3' TCCCTGGAGTC-GGAGGACCA 5'& ||| | | |.|||||| &5' ----ACC-CTGTCTTCCTGG- 3' Trim9 mmu-miR-665 beg:1262 end:1282 pic:3' TC-CCTGGAGTCGGAGGACCA 5'& | |||. ||| ||||||| &5' -GTGGATGTCA--CTCCTGG- 3' Trim9 mmu-miR-665 beg:367 end:390 pic:3' TCCCTGGAG-TC----GGAGGACCA 5'& .|| || .||||||| &5' ----GCCAAAAGAAATTCTCCTGG- 3' Trim9 mmu-miR-666-5p beg:1166 end:1185 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |||||| ||||||.|.| &5' -GCTCTC-----TGTGCCTGTT 3' Trim9 mmu-miR-667 beg:850 end:860 pic:3' GAACCCGACCCACCGTCCACAGT 5'& ||||||| &5' ----------------GGTGTCA 3' Trim9 mmu-miR-673-3p beg:373 end:391 pic:3' CCACGTGTC-TTGAGTCGGGGCCT 5'& || ||.|| .||.||| &5' -------AGAAATTC--TCCTGGA 3' Trim9 mmu-miR-673-3p beg:752 end:783 pic:3' CCACGTGT-CTTG------AGTCGGGGCCT 5'& |||. || |||| || .||.||| &5' -GTGTTCATGAACACCCTGTCT-TCCTGGA 3' Trim9 mmu-miR-673-5p beg:1014 end:1033 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& ||| |..|| ||||||. &5' CTC-----ATTAGTGCTGTGG- 3' Trim9 mmu-miR-673-5p beg:0 end:14 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& ||. | ||||||. &5' ------GGGT--GTGCTGTGG- 3' Trim9 mmu-miR-676 beg:198 end:219 pic:3' TCGAGTTGTTGGAGTCCTGCC 5'& |||||..||.|| || .| &5' AGCTCGGCAGCC-CACCGC-- 3' Trim9 mmu-miR-677 beg:137 end:159 pic:3' AGTCTTCGATTAGTAGTGACTT 5'& ||| || |||||||||| &5' -CAGCCTCTCCGCATCACTGAA 3' Trim9 mmu-miR-677 beg:846 end:864 pic:3' AGTCT-TCGATTAGTAGTGACTT 5'& ||| .|. .||||||| &5' --AGACGGT-----GTCACTGA- 3' Trim9 mmu-miR-683 beg:603 end:624 pic:3' CTCCTGTG-TCGAATGTCGTCC 5'& |||| .||| ||.||||| &5' ----ACACTGGCTCACGGCAGG 3' Trim9 mmu-miR-696 beg:1136 end:1157 pic:3' GGGTGTC--GTTCGTGTGCG 5'& || ||| ||| ||||| | &5' -CCTCAGGACAAACACAC-C 3' Trim9 mmu-miR-696 beg:580 end:599 pic:3' GGGTGTCGTTCGTGTGCG 5'& ||.. |||| |.|| &5' CCTGAAGCACAAATAC-- 3' Trim9 mmu-miR-703 beg:262 end:274 pic:3' AAGAAAGGAAGACTTCCAAAA 5'& |..|||||| &5' ------------GGGGGTTTT 3' Trim9 mmu-miR-705 beg:1086 end:1110 pic:3' ACGGGT-GG-GGTGGAGGGT-GG 5'& ||||| .| ||||| || . || &5' -GCCCAGTCACCACC-CCGGGCC 3' Trim9 mmu-miR-705 beg:914 end:941 pic:3' ACG-GGTGGGGT----GGAGGGTGG 5'& |. ||| |||| ..||||||| &5' -GTACCAACCCAATGCTTTCCCACC 3' Trim9 mmu-miR-706 beg:1536 end:1550 pic:3' AAAAAACTCTGTCC-CAAAGAGA 5'& || ||||.||| &5' ------------GGTGTTTTTCT 3' Trim9 mmu-miR-708star beg:1535 end:1554 pic:3' GATCTTCGAGTGTCAGATCAAC 5'& |.| |.|. ||||||| &5' -TGGT-GTTTT---TCTAGTT- 3' Trim9 mmu-miR-713 beg:1157 end:1180 pic:3' CGACACA--CGGAAGTCACGT 5'& ||||||| || || |||| &5' GCTGTGTCTGCTCTCTGTGC- 3' Trim9 mmu-miR-743a beg:1527 end:1549 pic:3' AGATGAGTC-GAACCACAGAAAG 5'& ||| | ||||||||.|||| &5' ----CTCTGTCTTGGTGTTTTTC 3' Trim9 mmu-miR-743b-3p beg:1528 end:1549 pic:3' AGATAAGTCGTACTACAGAAAG 5'& |||. || ||.|||.|||| &5' TCTG-TCT---TGGTGTTTTTC 3' Trim9 mmu-miR-743b-3p beg:232 end:253 pic:3' AGATAAGTCGTACTACAGAAAG 5'& ||| |.|| |||.|||| &5' ----TTCCACGTGTTGTTTTTC 3' Trim9 mmu-miR-758 beg:1172 end:1190 pic:3' ATCACCTGGTCCAGTGTTT 5'& || || ||.||||| &5' ---TGTGCCT-GTTACAAA 3' Trim9 mmu-miR-758 beg:1019 end:1039 pic:3' ATCACCTGGTCCAGTGTTT 5'& ||||| |||||.|| &5' TAGTGCTGT-GGTCATAA- 3' Trim9 mmu-miR-760 beg:963 end:985 pic:3' AGGGGTGTCTGG-GTCTCGGC 5'& . .||| ||| ||||||| &5' -TGTCACTCACCGCAGAGCC- 3' Trim9 mmu-miR-7astar beg:262 end:284 pic:3' ATACCGTCT--GACACTAAACAAC 5'& ||| .|. .||| .|||||| &5' --TGGGGGGTTTTGTTGTTTGTT- 3' Trim9 mmu-miR-804 beg:1483 end:1504 pic:3' AGGTCCACTCCTTGTTGAGTGT 5'& || || ||.|.||||| &5' -CCTC-TGTA-AATAGCTCAC- 3' Trim9 mmu-miR-872 beg:40 end:59 pic:3' GGACTTGATTGTTCATTGGAA 5'& |||||.| |.|| .||| &5' CCTGAGCCAGCA----GCCT- 3' Trim9 mmu-miR-9 beg:1214 end:1234 pic:3' AGTATGTCGATCTATT-GGTTTCT 5'& ||||| || |.||||| &5' ----ACAGCCTGACTTTCTAAAGA 3' Trim9 mmu-miR-92astar beg:924 end:941 pic:3' CATTACGGTGGTTAGGGGTGGA 5'& |||||. |.|||||| &5' --AATGCT-----TTCCCACC- 3' Trim9 mmu-miR-92astar beg:161 end:179 pic:3' CATTACGGTGGTTAGGGGTGGA 5'& || || |||.|||| &5' -----GCTCCCT-TCCTCACC- 3' Trim9 mmu-miR-93star beg:194 end:211 pic:3' GCCCTTCACGATCGAGTCGTCA 5'& ||.| |||||.|||| &5' ---GAGG----AGCTCGGCAG- 3' Trim9 mmu-miR-93star beg:974 end:997 pic:3' GCCCTTCACGATCGAGTCGTCA 5'& || .|| || ||.||||| &5' CGCAGAGCCCTTCCTTAGCAG- 3' Trim9 mmu-miR-143 beg:1516 end:1533 pic:3' CTCGATGTCACGAAGTAGAGT 5'& || |.| ||||||| &5' ---CTCCGGG---TCATCTC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Trim9 RAID00056057 mmu-miR-703 miRNA MIMAT0003493 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00074261 mmu-miR-1953 miRNA MIMAT0009424 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00148872 mmu-miR-485-5p miRNA MIMAT0003128 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID00152901 mmu-miR-7235-5p miRNA MIMAT0028438 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00174089 mmu-miR-7211-5p miRNA MIMAT0028390 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00180859 mmu-miR-144-3p miRNA MIMAT0000156 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00193153 mmu-miR-5107-5p miRNA MIMAT0020615 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00211143 mmu-miR-8094 miRNA MIMAT0031395 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00219986 mmu-miR-29b-2-5p miRNA MIMAT0017063 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00269048 mmu-miR-219c-3p miRNA MIMAT0029893 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00321357 mmu-miR-7021-3p miRNA MIMAT0027947 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00326094 mmu-miR-7065-5p miRNA MIMAT0028034 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00360750 mmu-miR-194-1-3p miRNA MIMAT0016999 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00386382 mmu-miR-3060-3p miRNA MIMAT0014827 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00475945 mmu-miR-224-5p miRNA MIMAT0000671 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6478 Trim9 RAID00479639 mmu-miR-9769-5p miRNA MIMAT0036461 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00480291 mmu-miR-29c-3p miRNA MIMAT0000536 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6478 Trim9 RAID00495222 mmu-miR-15a-5p miRNA MIMAT0000526 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID00551428 mmu-miR-7b-5p miRNA MIMAT0000678 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID00607377 mmu-miR-34b-5p miRNA MIMAT0000382 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID00631214 mmu-miR-143-3p miRNA MIMAT0000247 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00636329 mmu-miR-181d-5p miRNA MIMAT0004324 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00661150 mmu-miR-7020-5p miRNA MIMAT0027944 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00671052 mmu-miR-199a-5p miRNA MIMAT0000229 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID00678955 mmu-miR-200a-3p miRNA MIMAT0000519 Trim9 mRNA 94090 CLIP-seq 0.5483 Trim9 RAID00689358 mmu-miR-188-3p miRNA MIMAT0004541 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00697506 mmu-miR-495-3p miRNA MIMAT0003456 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID00770114 mmu-miR-203-3p miRNA MIMAT0000236 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00787565 mmu-miR-195a-5p miRNA MIMAT0000225 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID00922200 mmu-miR-34a-5p miRNA MIMAT0000542 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID00935520 mmu-miR-191-5p miRNA MIMAT0000221 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00942511 mmu-miR-7241-5p miRNA MIMAT0028450 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID00982397 mmu-miR-7050-5p miRNA MIMAT0028004 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01013647 mmu-miR-351-5p miRNA MIMAT0000609 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01050852 mmu-miR-7674-3p miRNA MIMAT0029857 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01076248 mmu-miR-497a-5p miRNA MIMAT0003453 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID01089645 mmu-miR-7210-5p miRNA MIMAT0028388 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01136294 mmu-miR-383-5p miRNA MIMAT0000748 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01147509 mmu-miR-653-5p miRNA MIMAT0004943 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01171851 mmu-miR-223-3p miRNA MIMAT0000665 Trim9 mRNA 94090 NGS (Next Generation Sequencing)//CLIP-seq 0.6606 Trim9 RAID01178810 mmu-miR-449c-5p miRNA MIMAT0003460 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID01197551 mmu-miR-6407 miRNA MIMAT0025160 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01217901 mmu-miR-1938 miRNA MIMAT0009402 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01245701 mmu-miR-342-3p miRNA MIMAT0000590 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01249519 mmu-miR-7243-5p miRNA MIMAT0029910 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01293450 mmu-miR-6946-3p miRNA MIMAT0027793 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01371479 mmu-miR-6938-5p miRNA MIMAT0027776 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01407807 mmu-miR-30c-5p miRNA MIMAT0000514 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID01417117 mmu-miR-499-5p miRNA MIMAT0003482 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6478 Trim9 RAID01423332 mmu-miR-7047-5p miRNA MIMAT0027998 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01448249 mmu-miR-3085-5p miRNA MIMAT0014878 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01478940 mmu-miR-181b-5p miRNA MIMAT0000673 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01500066 mmu-miR-7652-5p miRNA MIMAT0029810 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01522227 mmu-miR-494-3p miRNA MIMAT0003182 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01599551 mmu-miR-7217-5p miRNA MIMAT0028402 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01660139 mmu-miR-6997-5p miRNA MIMAT0027896 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01676209 mmu-miR-3090-5p miRNA MIMAT0014901 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01697827 mmu-miR-3087-5p miRNA MIMAT0014895 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01705227 mmu-miR-675-3p miRNA MIMAT0003726 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01705618 mmu-miR-802-5p miRNA MIMAT0004188 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01705918 mmu-miR-1962 miRNA MIMAT0009435 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01728671 mmu-miR-6358 miRNA MIMAT0025101 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01763857 mmu-miR-667-3p miRNA MIMAT0003734 Trim9 mRNA 94090 CLIP-seq 0.5483 Trim9 RAID01764348 mmu-miR-465a-5p miRNA MIMAT0002106 Trim9 mRNA 94090 CLIP-seq 0.5483 Trim9 RAID01765441 mmu-miR-216c-5p miRNA MIMAT0029888 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01775695 mmu-miR-7660-3p miRNA MIMAT0029827 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01787903 mmu-miR-122-5p miRNA MIMAT0000246 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID01805335 mmu-miR-7239-3p miRNA MIMAT0028447 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01815841 mmu-miR-344f-5p miRNA MIMAT0014931 Trim9 mRNA 94090 CLIP-seq 0.5483 Trim9 RAID01887751 mmu-miR-6338 miRNA MIMAT0025081 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01913140 mmu-miR-449c-3p miRNA MIMAT0022715 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01946252 mmu-miR-5616-5p miRNA MIMAT0022359 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID01987515 mmu-miR-3103-5p miRNA MIMAT0014937 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02001977 mmu-miR-6975-3p miRNA MIMAT0027853 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02040416 mmu-miR-186-5p miRNA MIMAT0000215 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID02043802 mmu-miR-542-3p miRNA MIMAT0003172 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02063810 mmu-miR-344i miRNA MIMAT0022503 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02070861 mmu-miR-692 miRNA MIMAT0003471 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02094397 mmu-miR-133b-5p miRNA MIMAT0017083 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02139482 mmu-miR-1224-3p miRNA MIMAT0017231 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02169294 mmu-miR-218-5p miRNA MIMAT0000663 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6478 Trim9 RAID02171969 mmu-miR-194-5p miRNA MIMAT0000224 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6478 Trim9 RAID02187230 mmu-miR-3059-5p miRNA MIMAT0014811 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02196800 mmu-miR-1194 miRNA MIMAT0005852 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02211837 mmu-miR-30b-5p miRNA MIMAT0000130 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID02273681 mmu-miR-6715-5p miRNA MIMAT0029876 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02298846 mmu-miR-449b miRNA MIMAT0005447 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID02308822 mmu-mir-325 miRNA MI0000597 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02335418 mmu-miR-6384 miRNA MIMAT0025130 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02336076 mmu-miR-6982-5p miRNA MIMAT0027866 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02342333 mmu-miR-7032-3p miRNA MIMAT0027969 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02348290 mmu-miR-152-5p miRNA MIMAT0016991 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02359151 mmu-miR-6541 miRNA MIMAT0025588 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02382666 mmu-miR-211-5p miRNA MIMAT0000668 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02430395 mmu-miR-490-3p miRNA MIMAT0003780 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02435459 mmu-miR-677-5p miRNA MIMAT0003451 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID02490959 mmu-miR-873a-5p miRNA MIMAT0004936 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID02513034 mmu-miR-6715-3p miRNA MIMAT0029877 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02539506 mmu-miR-1839-5p miRNA MIMAT0009456 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02541634 mmu-miR-6366 miRNA MIMAT0025110 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02595218 mmu-miR-7665-3p miRNA MIMAT0029837 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02621955 mmu-miR-1a-2-5p miRNA MIMAT0017047 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02663943 mmu-miR-7008-3p miRNA MIMAT0027921 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02682926 mmu-miR-26b-5p miRNA MIMAT0000534 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02729582 mmu-miR-3062-5p miRNA MIMAT0014830 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02756521 mmu-miR-29a-3p miRNA MIMAT0000535 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID02808678 mmu-miR-3102-3p miRNA MIMAT0014936 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02836950 mmu-miR-7a-5p miRNA MIMAT0000677 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID02839210 mmu-miR-384-5p miRNA MIMAT0004745 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID02941667 mmu-miR-582-5p miRNA MIMAT0005291 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID02977011 mmu-miR-149-5p miRNA MIMAT0000159 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID02980569 mmu-miR-181a-5p miRNA MIMAT0000210 Trim9 mRNA 94090 NGS (Next Generation Sequencing)//Prediction 0.6308 Trim9 RAID03000217 mmu-miR-141-3p miRNA MIMAT0000153 Trim9 mRNA 94090 CLIP-seq 0.5483 Trim9 RAID03013960 mmu-miR-34c-5p miRNA MIMAT0000381 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID03049322 mmu-miR-760-3p miRNA MIMAT0003898 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03121532 mmu-miR-7119-3p miRNA MIMAT0028136 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03123549 mmu-miR-30a-5p miRNA MIMAT0000128 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID03160132 mmu-miR-24-3p miRNA MIMAT0000219 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID03174481 mmu-miR-30d-5p miRNA MIMAT0000515 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID03219017 mmu-miR-33-5p miRNA MIMAT0000667 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03226536 mmu-miR-130a-5p miRNA MIMAT0016983 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03232877 mmu-miR-376b-3p miRNA MIMAT0001092 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03241666 mmu-miR-181c-5p miRNA MIMAT0000674 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03336451 mmu-miR-6952-5p miRNA MIMAT0027804 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03342751 mmu-miR-7002-3p miRNA MIMAT0027907 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03348899 mmu-miR-1904 miRNA MIMAT0007874 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03357644 mmu-miR-6393 miRNA MIMAT0025143 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03365500 mmu-miR-449a-5p miRNA MIMAT0001542 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID03399278 mmu-miR-6987-3p miRNA MIMAT0027877 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03411946 mmu-miR-126b-5p miRNA MIMAT0029894 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03441810 mmu-miR-8114 miRNA MIMAT0031420 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03478643 mmu-miR-365-3p miRNA MIMAT0000711 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03505448 mmu-miR-544-3p miRNA MIMAT0004941 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03539593 mmu-miR-9-5p miRNA MIMAT0000142 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03556423 mmu-miR-31-5p miRNA MIMAT0000538 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID03558305 mmu-miR-15b-5p miRNA MIMAT0000124 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6308 Trim9 RAID03591944 mmu-miR-25-5p miRNA MIMAT0017049 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03595723 mmu-miR-7087-3p miRNA MIMAT0028081 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03654842 mmu-miR-543-3p miRNA MIMAT0003168 Trim9 mRNA 94090 Prediction 0.2202 Trim9 RAID03662765 mmu-miR-7212-5p miRNA MIMAT0028392 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03711808 mmu-miR-326-3p miRNA MIMAT0000559 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03786192 mmu-miR-330-5p miRNA MIMAT0004642 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03825037 mmu-miR-7066-5p miRNA MIMAT0028036 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03855337 mmu-miR-6965-5p miRNA MIMAT0027830 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03886558 mmu-miR-6376 miRNA MIMAT0025120 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03911097 mmu-miR-221-3p miRNA MIMAT0000669 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03918282 mmu-miR-5619-5p miRNA MIMAT0022365 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03920895 mmu-miR-29b-3p miRNA MIMAT0000127 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6478 Trim9 RAID03930804 mmu-miR-3113-5p miRNA MIMAT0014959 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03957280 mmu-miR-1192 miRNA MIMAT0005850 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID03971502 mmu-miR-30e-5p miRNA MIMAT0000248 Trim9 mRNA 94090 CLIP-seq//Prediction 0.6478 Trim9 RAID04011801 mmu-miR-665-3p miRNA MIMAT0003733 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID04020081 mmu-miR-7117-5p miRNA MIMAT0028131 Trim9 mRNA 94090 Prediction 0.1828 Trim9 RAID04021911 mmu-miR-204-5p miRNA MIMAT0000237 Trim9 mRNA 94090 Prediction 0.1828