DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Atxn3; Mjd ATTTA 85-1152 2089-2093;2106-2110;2491-2495;2530-2534;2968-2972;3172-3176;3250-3254;3899-3903;4167-4171;4509-4513;4597-4601 Atxn3; Mjd WWATTTAWW 85-1152 2104-2112 Atxn3; Mjd WWWATTTAWWW 85-1152 2103-2113 Atxn3; Mjd WWWWATTTAWWWW 85-1152 2102-2114

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT594537 mmu-miR-129-5p Mus musculus Atxn3 110616 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT009949 mmu-miR-17-5p Mus musculus Atxn3 110616 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT594539 mmu-miR-218-5p Mus musculus Atxn3 110616 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT010394 mmu-miR-340-5p Mus musculus Atxn3 110616 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT594536 mmu-miR-590-3p Mus musculus Atxn3 110616 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT594538 mmu-miR-669n Mus musculus Atxn3 110616 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT594540 mmu-miR-5104 Mus musculus Atxn3 110616 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 110616 Atxn3 cguuccgUCACCGGAC-AUGUCa ||| |::|| ||||| ugauuuaAGUUGUUUGAUACAGu 2 16 2745 2767 [mm9:12:103158550-103158572:-] 0.5852 123 0 -14.67 -0.1839 MIMAT0004519 mmu-let-7g* 110616 Atxn3 cguucCGUCACCGGACAU--GUCa |:|||||::|||| ||| acacuGUAGUGGUUUGUAAGCAGa 2 18 101 124 [mm9:12:103161193-103161216:-] 0.5550 121 0 -24.69 -0.2524 MIMAT0004519 mmu-let-7g* 110616 Atxn3 cguuccgUCACCGGACAUGUCa ||| |:: |||||| -------AGUAGUUGGUACAGa 2 16 1 15 [mm9:12:103171159-103171173:-] 0.7141 127 6 -12.71 -0.2060 MIMAT0004523 mmu-miR-29b* 110616 Atxn3 auUUGGUGGU-AUAC--UUUGGUCg :||| : | || | ||||||| guGACCUUAAUUAAGAAAAACCAGa 2 21 3389 3413 [mm9:12:103157904-103157928:-] 0.5342 146 7 -12.31 -0.7904 MIMAT0000129 mmu-miR-30a* 110616 Atxn3 cgACGUUUGUAGGCUGACUUUc ||| ||:|||:|||||||| ugUGC-AAUAUCUGACUGAAAu 2 21 229 249 [mm9:12:103161068-103161088:-] 0.6049 178 7 -23.87 -0.3227 MIMAT0000129 mmu-miR-30a* 110616 Atxn3 cgacguuuGUAGGCUGACUUUc ::||: ||||||| uuuauugcUGUCUAACUGAAAa 2 15 1340 1361 [mm9:12:103159956-103159977:-] 0.5474 150 7 -14.31 -0.5984 MIMAT0000143 mmu-miR-9* 110616 Atxn3 ugaaagccaauAGAUCGAAAUa |: ||||||| ccaauauacacUUCAGCUUUAa 2 12 1854 1875 [mm9:12:103159442-103159463:-] 0.5865 143 7 -6.46 -0.4558 MIMAT0000152 mmu-miR-140* 110616 Atxn3 ggCACC-AAGAUGGGA-CACCAu |||| | || :||| ||||| acGUGGAUGCU-UCCUGGUGGUa 2 20 454 475 [mm9:12:103160842-103160863:-] 0.5197 124 0 -26.83 -0.1753 MIMAT0004539 mmu-miR-183* 110616 Atxn3 aaUACCGGGAAGCCAUUAAGUg || | | ||| ||||||| cuAU-GACAUUC--UAAUUCAu 2 21 2181 2199 [mm9:12:103159118-103159136:-] 0.5741 147 7 -9.13 -0.1433 MIMAT0004539 mmu-miR-183* 110616 Atxn3 aauaccGGGAAGCCAUUAA-GUg :|:||| |||||| || aaguuuUCUUUCAGUAAUUGCAa 2 17 1628 1650 [mm9:12:103159667-103159689:-] 0.5163 128 0 -11.61 -0.2276 MIMAT0004544 mmu-miR-193* 110616 Atxn3 aguagaACGGGCGUUUCUGGGu ||| | ||||||| uggagcUGCACAGUAAGACCCu 2 17 2566 2587 [mm9:12:103158730-103158751:-] 0.4997 148 7 -17.38 -0.1508 MIMAT0000230 mmu-miR-199a-3p 110616 Atxn3 auugGUUAC--ACG-UCUGAUGACa :|||| | | | ||||||| uaugUAAUGAAUACUAAACUACUGa 2 19 2328 2352 [mm9:12:103158965-103158989:-] 0.5741 148 7 -12.03 -1.0578 MIMAT0000234 mmu-miR-201 110616 Atxn3 uucuugUUACGGAAUGAC-UCAu | |||: ||||| ||| caguugAUUGCUAUACUGAAGUa 2 17 1703 1725 [mm9:12:103159592-103159614:-] 0.5429 124 0 -14.70 -0.4256 MIMAT0004546 mmu-miR-202-5p 110616 Atxn3 uuUCUUCAUAUACGUAUCCUu |||| |:|:| ||||||| gcAGAAAUGUGU-CAUAGGAc 2 20 128 147 [mm9:12:103161170-103161189:-] 0.5849 165 7 -15.83 -0.2199 MIMAT0000249 mmu-miR-30e* 110616 Atxn3 cgACAU-UUGUAGGCUGACUUUc |||: ||:|||:|||||||| aaUGUGCAAUAUCUGACUGAAAu 2 21 227 249 [mm9:12:103161068-103161090:-] 0.6049 179 7 -23.38 -0.3227 MIMAT0000249 mmu-miR-30e* 110616 Atxn3 cgACAUUUGUAGGCUGACUUUc | | : ::||: ||||||| uuUAUUGCUGUCUAACUGAAAa 2 21 1340 1361 [mm9:12:103159956-103159977:-] 0.5474 152 7 -12.50 -0.5984 MIMAT0004575 mmu-miR-295* 110616 Atxn3 cuucacACGGGGUGUAAACUCa || :| :||||||| acacacUGAAUC-UAUUUGAGu 2 17 1979 1999 [mm9:12:103159318-103159338:-] 0.5854 142 7 -12.16 -0.2131 MIMAT0000378 mmu-miR-300 110616 Atxn3 cuucucucgaacgggAACGUAu |||||| ugguacagauuaaagUUGCAUa 2 8 7 28 [mm9:12:103171146-103171167:-] 0.7141 120 6 -7.65 -0.6187 MIMAT0004620 mmu-let-7a* 110616 Atxn3 ccuuucUGUCAUCUAAC-AUAUc ||||| ||||| |||| uugcuuACAGUUGAUUGCUAUAc 2 17 1696 1718 [mm9:12:103159599-103159621:-] 0.5429 136 0 -12.42 -0.1793 MIMAT0004621 mmu-let-7b* 110616 Atxn3 cccuuccGUCAUCCAAC-AUAUc |||| | ||| |||| uugcuuaCAGUUGAUUGCUAUAc 2 16 1696 1718 [mm9:12:103159599-103159621:-] 0.5429 123 0 -7.35 -0.1827 MIMAT0004622 mmu-let-7c-1* 110616 Atxn3 ccUUUCGAUCUUCCAAC--AUGUc |:||:|||:| ||| |||| uuAGAGUUAGGACUUUGCUUACAg 2 21 1682 1705 [mm9:12:103159612-103159635:-] 0.5349 120 0 -17.06 -0.2891 MIMAT0005439 mmu-let-7c-2* 110616 Atxn3 ccuuucUGUCAUCUAAC-AUAUc ||||| ||||| |||| uugcuuACAGUUGAUUGCUAUAc 2 17 1696 1718 [mm9:12:103159599-103159621:-] 0.5429 136 0 -12.42 -0.1793 MIMAT0004623 mmu-let-7f* 110616 Atxn3 cccuuccGUUAUCUAAC-AUAUc ||:| ||||| |||| uugcuuaCAGUUGAUUGCUAUAc 2 16 1696 1718 [mm9:12:103159599-103159621:-] 0.5429 127 0 -9.92 -0.1862 MIMAT0004625 mmu-miR-16* 110616 Atxn3 agucgucgugucaGUUAUGACc :||||||| aaauauauuuaaaUAAUACUGu 2 10 948 969 [mm9:12:103160348-103160369:-] 0.5789 141 7 -7.89 -0.4733 MIMAT0004628 mmu-miR-21* 110616 Atxn3 cugucgGGUAGCUGACGACAAc ||| ::||||||| ucauaaCCAGGAGUUGCUGUUu 2 17 2196 2217 [mm9:12:103159100-103159121:-] 0.5741 148 7 -15.42 -0.1969 MIMAT0000549 mmu-miR-322* 110616 Atxn3 caCAAC--GUCGCG-AAGUACAAa |||| | :|| ||||||| ggGUUGACCCUUGCAAUCAUGUUu 2 20 970 993 [mm9:12:103160324-103160347:-] 0.5798 145 7 -14.99 -0.4163 MIMAT0000556 mmu-miR-324-3p 110616 Atxn3 ucgucgUGGACCCCGUCACc |: | ||||||| gacuugAUGUUAGGCAGUGu 2 15 3190 3209 [mm9:12:103158108-103158127:-] 0.4828 142 7 -14.71 -0.1085 MIMAT0000569 mmu-miR-330* 110616 Atxn3 agagacguccgggACACGAAACg | ||||||| cucaaaggaguagUCUGCUUUGu 2 11 2906 2928 [mm9:12:103158389-103158411:-] 0.5692 142 7 -15.03 -0.1710 MIMAT0000569 mmu-miR-330* 110616 Atxn3 agagacguccGGGACAC-GAAACg |:||||| ||||| uggaaauuaaCUCUGUGUCUUUGu 2 14 1126 1149 [mm9:12:103160168-103160191:-] 0.5433 125 0 -17.92 -0.1019 MIMAT0004643 mmu-miR-331-5p 110616 Atxn3 ccuagggacccuggUAUGGAuc |||||| aaguugcauauuuaAUACCU-- 3 9 19 38 [mm9:12:103171136-103171155:-] 0.7141 120 0 -8.98 -0.4704 MIMAT0004661 mmu-miR-28* 110616 Atxn3 aggucGUCGAGUGUUA-GAUCAc |||| |:::|| ||||| gcguaCAGC-CGUGAUGCUAGUg 2 18 2397 2418 [mm9:12:103158899-103158920:-] 0.5741 123 0 -21.01 -0.1987 MIMAT0004666 mmu-miR-33* 110616 Atxn3 cacuacgUGACAC-CUUUGUAAc ::| || ||||||| guccuuaGUUUUGAUAAACAUUa 2 16 1053 1075 [mm9:12:103160242-103160264:-] 0.5433 142 7 -6.07 -0.4745 MIMAT0004666 mmu-miR-33* 110616 Atxn3 cacuacgugacaccUUUGUAAc ||||||| gaccuaggcuuacuAAACAUUu 2 9 2080 2101 [mm9:12:103159216-103159237:-] 0.5783 140 7 -6.80 -0.2596 MIMAT0004667 mmu-miR-199b 110616 Atxn3 auugGUUAC--ACG-UCUGAUGACa :|||| | | | ||||||| uaugUAAUGAAUACUAAACUACUGa 2 19 2328 2352 [mm9:12:103158965-103158989:-] 0.5741 148 7 -12.03 -1.0578 MIMAT0004668 mmu-miR-138* 110616 Atxn3 gggaccACAACACUUCAUCGGc | || :||||||| uuucauUAUUAAUGAGUAGCCa 2 17 2105 2126 [mm9:12:103159191-103159212:-] 0.5455 144 7 -11.40 -0.5138 MIMAT0004670 mmu-miR-7a* 110616 Atxn3 auaCCGUCUGACA--CUAAACAAc | | ||| | ||||||| cucGACUAACUUUUCCAUUUGUUu 2 20 2274 2297 [mm9:12:103159020-103159043:-] 0.5741 142 7 -5.17 -0.3164 MIMAT0004670 mmu-miR-7a* 110616 Atxn3 auaccgucugacACUAAACAAc | ||||||| ucccuucaucccUAAUUUGUUu 2 11 3460 3481 [mm9:12:103157836-103157857:-] 0.5341 142 7 -3.59 -0.6359 MIMAT0003387 mmu-miR-376a* 110616 Atxn3 ugaguaucuuccucUUAGAUGg ||||||| uggccuaaaccauaAAUCUACa 2 9 2691 2712 [mm9:12:103158605-103158626:-] 0.5694 140 7 -10.06 -0.3962 MIMAT0004691 mmu-miR-382* 110616 Atxn3 uuUUUCACAACAG--GCACUUACu :|||| | || ||||||| agGAAGUACUUUCAAAGUGAAUGu 2 21 3325 3348 [mm9:12:103157969-103157992:-] 0.5119 151 7 -14.72 -0.3688 MIMAT0004704 mmu-miR-335-3p 110616 Atxn3 ccAGUCCUCGUUAUUACUUUUu | || ||| | ||||||| aaUGAGUAGCCAGUAUGAAAAg 2 21 2115 2136 [mm9:12:103159181-103159202:-] 0.5455 160 7 -12.13 -0.1300 MIMAT0004704 mmu-miR-335-3p 110616 Atxn3 ccaguccucguuAUUACUUUUu |:||||||| uggugugcugccUGAUGAAAAa 2 11 1824 1845 [mm9:12:103159472-103159493:-] 0.5865 146 7 -13.08 -0.1122 MIMAT0004704 mmu-miR-335-3p 110616 Atxn3 ccaguccucguuAUUACUUUUu | ||||||| uaaaaauuugcuUCAUGAAAAa 2 11 1579 1600 [mm9:12:103159717-103159738:-] 0.5163 142 7 -6.27 -0.3552 MIMAT0001093 mmu-miR-411* 110616 Atxn3 ccAAUCA--CCUGG-CACAAUGUAu ||:|| ||:: |||:||| agUUGGUACAGAUUAAAGUUGCAUa 2 21 4 28 [mm9:12:103171146-103171170:-] 0.7141 126 0 -15.26 -0.2346 MIMAT0001094 mmu-miR-412 110616 Atxn3 gcCGAUCACCUGGUCCACUu |: |||| ||||||| caGUCAGUG---CAGGUGAa 2 19 2764 2780 [mm9:12:103158537-103158553:-] 0.5852 146 7 -17.11 -0.1779 MIMAT0002106 mmu-miR-465a-5p 110616 Atxn3 aguguagucacGGUAAGAUUUAu |: |||||||| aaugaaagaaaCUUUUCUAAAUg 2 13 187 209 [mm9:12:103161108-103161130:-] 0.6173 148 7 -9.96 -0.3774 MIMAT0004217 mmu-miR-465a-3p 110616 Atxn3 agauGAAUCUUUCCGGGACUAg | |||| | ||||||| guguCAUAGAUA--CCCUGAUa 2 19 1154 1173 [mm9:12:103160144-103160163:-] 0.5454 151 7 -14.75 -0.3187 MIMAT0004759 mmu-miR-466a-5p 110616 Atxn3 auACA-UGU-ACAUGU-GUGUGUAu ||| | | | || : ||||||| cgUGUCAGAGUCUAAGCCACACAUu 2 21 2966 2990 [mm9:12:103158327-103158351:-] 0.5882 145 7 -12.31 -0.2190 MIMAT0002110 mmu-miR-469 110616 Atxn3 ccUG-UGGUUCUA--GUUACUUUCUCCGu || |:|:|||| :|: |||||||| gaACGAUCGAGAUACUAGCCAAAGAGGCa 2 25 152 180 [mm9:12:103161137-103161165:-] 0.6149 166 7 -24.89 -0.2490 MIMAT0002111 mmu-miR-470 110616 Atxn3 ugaGUGGUCACGGUCAGGUUCUu ||: :|| ||||||||| guaCAUAGGU-AAAGUCCAAGAa 2 21 1221 1242 [mm9:12:103160075-103160096:-] 0.5474 154 7 -21.31 -0.1929 MIMAT0004786 mmu-miR-540-5p 110616 Atxn3 ugucucaGUCUCCC-ACUGGGAAc | | ||| |||||||| aauaauaCUGUGGGUUGACCCUUg 2 17 959 982 [mm9:12:103160335-103160358:-] 0.5789 155 7 -24.73 -0.2479 MIMAT0003373 mmu-miR-302b* 110616 Atxn3 ucuuucguaaggguacAAUUUCa |||||| -aguaguugguacagaUUAAAGu 2 8 1 22 [mm9:12:103171152-103171173:-] 0.7141 120 6 -8.56 -0.1540 MIMAT0003375 mmu-miR-302c* 110616 Atxn3 cguccauugggguacAAUUUCg |||||| aguaguugguacagaUUAAAGu 2 8 1 22 [mm9:12:103171152-103171173:-] 0.7141 120 6 -11.50 -0.1540 MIMAT0015219 mmu-miR-3475 110616 Atxn3 aaGUUUGGUAC-AC---GGAGGUCu ||: : :|| || ||||||| uuCAGUUAGUGUUGAAACCUCCAGa 2 20 3162 3186 [mm9:12:103158131-103158155:-] 0.4971 141 7 -21.29 -0.2425 MIMAT0003736 mmu-miR-670 110616 Atxn3 aaGUGGUGUAUGUG-AGUCCCUa || |||:| : : ||||||| ugCA-CACGUUUUUAUCAGGGAa 2 21 1302 1323 [mm9:12:103159994-103160015:-] 0.5474 149 7 -20.36 -0.4111 MIMAT0003894 mmu-miR-764-5p 110616 Atxn3 uccUCCUGUACACUCGUGg || : | ||||||| uaaAGAGAAACUGAGCACa 2 17 1963 1981 [mm9:12:103159336-103159354:-] 0.5338 144 7 -13.31 -0.4243 MIMAT0003896 mmu-miR-763 110616 Atxn3 cggugaccaAGAAG-GGUCGACc ||||| ||||||| uccuuccucUCUUCUCCAGCUGa 2 14 655 677 [mm9:12:103160640-103160662:-] 0.5681 156 7 -21.73 -0.2583 MIMAT0003451 mmu-miR-677 110616 Atxn3 agucUUCGAUUAGU--AGUGACUu | || |: || ||||||| uacuAUGC-AGACAUUUCACUGAu 2 19 2726 2748 [mm9:12:103158569-103158591:-] 0.5773 143 7 -12.98 -0.3793 MIMAT0003457 mmu-miR-680 110616 Atxn3 ggGGGUACAGUCGUCUACGGg || :| | | ||||||| agCCAGUAUGAAAAGAUGCCa 2 20 2122 2142 [mm9:12:103159175-103159195:-] 0.5455 151 7 -20.26 -0.8439 MIMAT0003457 mmu-miR-680 110616 Atxn3 ggGGGUACAGUCGUCUACGGg :|| | | :||||||| agUCCUGGAAAAUAGAUGCCu 2 20 828 848 [mm9:12:103160469-103160489:-] 0.5616 147 7 -18.88 -0.3611 MIMAT0003471 mmu-miR-692 110616 Atxn3 cucaCUCCGC-GAGUUUCUCUa || :| :|:||||||| auuaGAAAUGUUUUAAAGAGAa 2 18 1950 1971 [mm9:12:103159346-103159367:-] 0.5344 148 7 -12.53 -0.7629 MIMAT0003471 mmu-miR-692 110616 Atxn3 cucacuccgcgAGUUUCUCUa |:||||||| uuuguuuauaaUUAAAGAGAc 2 11 3475 3495 [mm9:12:103157822-103157842:-] 0.5341 146 7 -8.93 -0.5976 MIMAT0003484 mmu-miR-720 110616 Atxn3 accuccGGGGUCG-CUCUa |:||||| |||| ucucuuCUCCAGCUGAGAa 2 13 662 680 [mm9:12:103160637-103160655:-] 0.5681 120 0 -18.14 -0.2176 MIMAT0003500 mmu-miR-710 110616 Atxn3 gaGUUGAGAGGGGU-UC-UGAACc :|:||||: ||| || ||||| auUAGCUCUUGCCACAGAACUUGa 2 21 284 307 [mm9:12:103161010-103161033:-] 0.5504 135 0 -22.67 -0.3004 MIMAT0003504 mmu-miR-713 110616 Atxn3 cgACAC-ACGGAAGUCACGu | || | | ||||||| ugUUUGAUACAGUCAGUGCa 2 18 2755 2774 [mm9:12:103158543-103158562:-] 0.5852 144 7 -15.78 -0.1373 MIMAT0003507 mmu-miR-500 110616 Atxn3 acuUGGGAACGGGUCCAC-GUAa ::|:|||:| |||| ||| uguGUCUUUGUCAUGGUGUCAUa 2 20 1139 1161 [mm9:12:103160156-103160178:-] 0.5433 127 0 -18.63 -0.2566 MIMAT0003509 mmu-miR-501-3p 110616 Atxn3 guuUAGGAACGGGCCCAC-GUAa :||:|||:| |||| ||| uguGUCUUUGUCAUGGUGUCAUa 2 20 1139 1161 [mm9:12:103160156-103160178:-] 0.5433 131 0 -20.25 -0.2566 MIMAT0003511 mmu-miR-450b-5p 110616 Atxn3 auAAGUCCUUG--UAUGACGUUUu ||||| | | |||||||| ggUUCAGUCUCUAACACUGCAAAa 2 21 3255 3278 [mm9:12:103158039-103158062:-] 0.4828 155 7 -17.02 -0.1218 MIMAT0003781 mmu-miR-676* 110616 Atxn3 cguUCAGGAUU-CCAACAUCUCa |||||||| ||||||| uuuAGUCCUAACAAGUGUAGAGc 2 20 3358 3380 [mm9:12:103157937-103157959:-] 0.5377 162 7 -22.15 -0.1411 MIMAT0003781 mmu-miR-676* 110616 Atxn3 cgUUCAGGAUUCCAACA-UCUCa ||||::|| ||| |||| guAAGUUUUAUUCGUGUCAGAGu 2 21 2954 2976 [mm9:12:103158341-103158363:-] 0.5882 124 0 -18.15 -0.1726 MIMAT0004238 mmu-miR-743a 110616 Atxn3 agaugagucgaaccACAGAAAg ||||||| uaccuuuuaugaaaUGUCUUUu 2 9 381 402 [mm9:12:103160915-103160936:-] 0.5175 140 7 -8.58 -0.5802 MIMAT0004238 mmu-miR-743a 110616 Atxn3 agaUGAGUCGAACCA-CAGAAAg |: |||| || | |||||| gaaAUACAGCAUGUUAGUCUUUu 2 20 1927 1949 [mm9:12:103159368-103159390:-] 0.5865 131 6 -13.62 -0.5538 MIMAT0004840 mmu-miR-743b-3p 110616 Atxn3 agauAAGUCGUACUACAGAAAg ||:| :: |||||||| accuUUUA-UGAAAUGUCUUUu 2 19 382 402 [mm9:12:103160915-103160935:-] 0.5175 148 7 -10.86 -0.5765 MIMAT0004840 mmu-miR-743b-3p 110616 Atxn3 agaUAAGUCGUACUA-CAGAAAg || ||||||| | |||||| gaaAUACAGCAUGUUAGUCUUUu 2 20 1927 1949 [mm9:12:103159368-103159390:-] 0.5865 143 6 -19.25 -0.5502 MIMAT0004844 mmu-miR-880 110616 Atxn3 agAUGAGUCUCUCCUACCU-CAu | ||: || |||||||| || uuUUCUU-GAUAGGAUGGAUGUu 2 21 1399 1420 [mm9:12:103159897-103159918:-] 0.5474 130 0 -18.38 -0.1715 MIMAT0004845 mmu-miR-881* 110616 Atxn3 ucUACACUGACAAUAGAGAGAc |||| | ||| ||||||| uaAUGUUUC-GUUUUCUCUCUg 2 21 313 333 [mm9:12:103160984-103161004:-] 0.5504 162 7 -20.78 -0.1488 MIMAT0004863 mmu-miR-220 110616 Atxn3 uucACAGACUGUGACACCACc | ||| :| ||||||| uauUUUCU-CUAAUGUGGUGa 2 19 474 493 [mm9:12:103160824-103160843:-] 0.5077 148 7 -12.04 -0.5670 MIMAT0004871 mmu-miR-465b-5p 110616 Atxn3 gucuagucgUGGUAAGAUUUAu ||: |||||||| augaaagaaACUUUUCUAAAUg 2 14 188 209 [mm9:12:103161108-103161129:-] 0.6173 153 7 -10.83 -0.3715 MIMAT0004872 mmu-miR-465b-3p 110616 Atxn3 agauGAAUCUUUCCGGGACUAg | |||| | ||||||| guguCAUAGAUA--CCCUGAUa 2 19 1154 1173 [mm9:12:103160144-103160163:-] 0.5454 151 7 -14.75 -0.3187 MIMAT0004873 mmu-miR-465c-5p 110616 Atxn3 gucuagucgcGGUAAGAUUUAu |: |||||||| augaaagaaaCUUUUCUAAAUg 2 13 188 209 [mm9:12:103161108-103161129:-] 0.6173 148 7 -9.47 -0.3774 MIMAT0004874 mmu-miR-465c-3p 110616 Atxn3 agauGAAUCUUUCCGGGACUAg | |||| | ||||||| guguCAUAGAUA--CCCUGAUa 2 19 1154 1173 [mm9:12:103160144-103160163:-] 0.5454 151 7 -14.75 -0.3187 MIMAT0004875 mmu-miR-466b-5p 110616 Atxn3 guACA-UGU-ACAUGU-GUGUGUAg ||| | | | || : ||||||| cgUGUCAGAGUCUAAGCCACACAUu 2 21 2966 2990 [mm9:12:103158327-103158351:-] 0.5882 145 7 -15.08 -0.2190 MIMAT0004877 mmu-miR-466c-5p 110616 Atxn3 auaCAUGUACGUGUGUGUGUAg || :| || ||||||| agaGUCUAAGC---CACACAUu 2 20 2972 2990 [mm9:12:103158327-103158345:-] 0.5882 143 7 -12.86 -0.2021 MIMAT0004879 mmu-miR-466e-5p 110616 Atxn3 auACA-UGU-ACAUGU-GUGUGUAg ||| | | | || : ||||||| cgUGUCAGAGUCUAAGCCACACAUu 2 21 2966 2990 [mm9:12:103158327-103158351:-] 0.5882 145 7 -12.75 -0.2190 MIMAT0004892 mmu-miR-568 110616 Atxn3 cacacaUAUGUAAAUAUGUa | | |||||||| uuuuucAAAGUUUUAUACAu 2 15 3511 3530 [mm9:12:103157787-103157806:-] 0.5341 146 7 -6.53 -0.7067 MIMAT0004898 mmu-miR-654-3p 110616 Atxn3 uuccacuaccaguCGUCUGUAu |||||||| acgacaguacuauGCAGACAUu 2 10 2719 2740 [mm9:12:103158577-103158598:-] 0.5773 145 7 -12.71 -0.2283 MIMAT0004930 mmu-miR-466d-5p 110616 Atxn3 guacauguacAUGCGUGUGUGu |: |||||||| aaagagaaacUGAGCACACACu 2 13 1964 1985 [mm9:12:103159332-103159353:-] 0.5338 148 7 -15.12 -0.1356 MIMAT0004933 mmu-miR-878-3p 110616 Atxn3 agAUGGGUCACACC--ACAGUACg | | :| | ||| ||||||| cuUUCAUAUUUUGGGAUGUCAUGa 2 21 2630 2653 [mm9:12:103158664-103158687:-] 0.5587 151 7 -14.70 -0.4059 MIMAT0004934 mmu-miR-872 110616 Atxn3 ggacUUGAUUGUU-CAUUGGAa ::|| |||: ||||||| caguGGCUCACAGUGUAACCUa 2 18 3285 3306 [mm9:12:103158011-103158032:-] 0.4828 156 7 -15.46 -0.2532 MIMAT0004861 mmu-miR-877 110616 Atxn3 gggACGCGGUAGAGGAGAUg ||| ||| ||||||| uugUGCUGCAU-UCCUCUAc 2 18 538 556 [mm9:12:103160761-103160779:-] 0.5681 155 7 -23.08 -0.1021 MIMAT0005830 mmu-miR-466l 110616 Atxn3 uuAUACACACGUACAUAAAUAu || || ||: | ||||||| uuUA-GUUUGU-UAUAUUUAUg 2 21 2007 2026 [mm9:12:103159291-103159310:-] 0.5596 152 7 -7.39 -0.1822 MIMAT0005830 mmu-miR-466l 110616 Atxn3 uuauacacacguACAUAAAUAu | ||||||| gauacaaauauuUUUAUUUAUg 2 11 1363 1384 [mm9:12:103159933-103159954:-] 0.5474 142 7 -3.79 -0.4893 MIMAT0005835 mmu-miR-1-2-as 110616 Atxn3 acCUUAC-AUUU--CUUCAUACAu || || || | ||||||||| uuGAUUGCUAUACUGAAGUAUGUa 2 20 1706 1729 [mm9:12:103159588-103159611:-] 0.5429 157 7 -13.59 -0.2608 MIMAT0005837 mmu-miR-1187 110616 Atxn3 aauGUGU-GUAUGUGUGUGUGUAu || | : || :| ||||||| uguCAGAGUCUAAGC-CACACAUu 2 21 2968 2990 [mm9:12:103158327-103158349:-] 0.5882 145 7 -10.85 -0.2040 MIMAT0005842 mmu-miR-669h-3p 110616 Atxn3 acACGUACACACAUAUAC-GUAu ||:| | || | |||| ||| agUGUAGGAGU-UCUAUGACAUu 2 21 2169 2190 [mm9:12:103159127-103159148:-] 0.5598 122 0 -10.70 -0.1739 MIMAT0005845 mmu-miR-466k 110616 Atxn3 aguguaCAUGUACAUGUGUGUGu | | || :||||||| uaaagaGAAACUGAGCACACACu 2 18 1963 1985 [mm9:12:103159332-103159354:-] 0.5338 149 7 -14.71 -0.1369 MIMAT0005848 mmu-miR-466j 110616 Atxn3 aaUGUG-UGUACGUG-----UACGU-GUGu ||:: |||||||| ||||| ||| cuACGUAACAUGCACCAUGAAUGCACCACa 2 22 714 743 [mm9:12:103160574-103160603:-] 0.5349 127 0 -24.88 -0.1783 MIMAT0005851 mmu-miR-1193 110616 Atxn3 cuaUC-AUUUUGCCCACUGGAu || || :|: ||||||| uagAGCUAUGAUAUGUGACCUu 2 19 3375 3396 [mm9:12:103157921-103157942:-] 0.5342 149 7 -13.15 -0.6688 MIMAT0005852 mmu-miR-1194 110616 Atxn3 uccuAGAUCGUCAAUG-AGUAAg |: ||| |||| ||||| ucacUUGAGCUUUUACUUCAUUu 2 19 352 374 [mm9:12:103160943-103160965:-] 0.5425 126 0 -11.25 -0.1171 MIMAT0007864 mmu-miR-1897-5p 110616 Atxn3 gggggagaaagagGUAGGUUUc :||||||| auucuagccacagUAUCCAAAg 2 10 2149 2170 [mm9:12:103159147-103159168:-] 0.5455 141 7 -15.08 -0.1242 MIMAT0007864 mmu-miR-1897-5p 110616 Atxn3 gggggagaaagaggUAGGUUUc ||||||| cauuguccaggcagAUCCAAAa 2 9 2028 2049 [mm9:12:103159268-103159289:-] 0.5339 140 7 -9.18 -0.1475 MIMAT0007868 mmu-miR-1903 110616 Atxn3 acAGAGUCCUUCUU-CUUC-UUCc | ||||| ||: |||| ||| aaUAUCAGGUUGAGUGAAGUAAGu 2 21 2936 2959 [mm9:12:103158358-103158381:-] 0.5882 127 0 -15.84 -0.2188 MIMAT0007874 mmu-miR-1904 110616 Atxn3 ggagggaggucuccUCGUCUUg ||||||| uguagugguuuguaAGCAGAAa 2 9 105 126 [mm9:12:103161191-103161212:-] 0.5550 140 7 -14.16 -0.3461 MIMAT0007876 mmu-miR-1907 110616 Atxn3 uggaGGUCUAGG-AGACGACGAg |:| || | ||||||| guaaCUACUCCCGUAUGCUGCUc 2 19 1727 1749 [mm9:12:103159568-103159590:-] 0.5509 145 7 -20.51 -0.1328 MIMAT0009394 mmu-miR-1931 110616 Atxn3 cgguaGCGUGGUCGGGAACGUa :| :::: |||||||| uacugUGGGUUGACCCUUGCAa 2 18 964 985 [mm9:12:103160332-103160353:-] 0.5798 149 7 -17.66 -0.2340 MIMAT0009409 mmu-miR-1944 110616 Atxn3 uuagucuugaacUGUAAGUCGUGUCUc ::| |::|:||||| -----------aGUAGUUGGUACAGAu 2 16 1 16 [mm9:12:103171158-103171173:-] 0.7141 135 0 -10.28 -0.1643 MIMAT0009415 mmu-miR-1948 110616 Atxn3 gacAUGCUCACGAGA-CGGAUUu || || ||:| |||||| gaaUAGCUGUCCUUUGGCCUAAa 2 20 2677 2699 [mm9:12:103158618-103158640:-] 0.5694 123 6 -14.51 -0.3041 MIMAT0009417 mmu-miR-1950 110616 Atxn3 acUGGUAUAGGAAUCUACGUCu || || | :||||||| aaACAUUAAGC-AGGAUGCAGa 2 21 1068 1088 [mm9:12:103160229-103160249:-] 0.5433 142 7 -15.43 -0.1889 MIMAT0009425 mmu-miR-1954 110616 Atxn3 uugucccagagUGAGACGUCa | ||||||| uacuuaggagaAAUCUGCAGa 2 11 2482 2502 [mm9:12:103158815-103158835:-] 0.4977 142 7 -14.97 -0.2251 MIMAT0009431 mmu-miR-1958 110616 Atxn3 ugAAUGACGAAGGUG-AAAGGAu ||| || :||| |||||| ugUUAGUGGGAUCACAUUUCCUa 2 21 514 536 [mm9:12:103160781-103160803:-] 0.5319 128 6 -16.31 -0.1149 MIMAT0009455 mmu-miR-1983 110616 Atxn3 ucUUUUGUACG--AGGUCCACUc :| ||| | | ||||||| uuGAUACAGUCAGUGCAGGUGAa 2 20 2758 2780 [mm9:12:103158537-103158559:-] 0.5852 146 7 -12.63 -0.1914 MIMAT0012772 mmu-miR-599 110616 Atxn3 caaaCUAUUUGACU-GUGUu || ||||||| |||| uaaaGAGAAACUGAGCACAc 2 16 1963 1982 [mm9:12:103159335-103159354:-] 0.5338 131 0 -13.56 -0.3608 MIMAT0012774 mmu-miR-664 110616 Atxn3 auccgaccccuCAUUUACUUAu || ||||||| auguauuguauGU-AAUGAAUa 2 12 2320 2340 [mm9:12:103158977-103158997:-] 0.5741 141 7 -8.74 -0.7612 MIMAT0015640 mmu-miR-3470a 110616 Atxn3 ggUCGG-ACCAGAUGUUUCACu |||| || | ||||||| cuAGCCACAGUAUCCAAAGUGu 2 20 2152 2173 [mm9:12:103159144-103159165:-] 0.5455 154 7 -18.59 -0.1112 MIMAT0015640 mmu-miR-3470a 110616 Atxn3 ggucggaccaGAUGUUUCACu :| ||||||| aaggaaguacUUUCAAAGUGa 2 12 3324 3344 [mm9:12:103157973-103157993:-] 0.5119 143 7 -13.83 -0.6829 MIMAT0015640 mmu-miR-3470a 110616 Atxn3 ggucGGACCAGAUGUUU-CACu ::|| |:| |||| ||| ccguUUUGUUUUUCAAAUGUGc 2 18 212 233 [mm9:12:103161084-103161105:-] 0.6123 121 0 -13.13 -0.5671 MIMAT0000124 mmu-miR-15b 110616 Atxn3 acAUU--UGGUACUACACGACGAu ||| ||: :| ||||||| ugUAACUACUCCCGUAUGCUGCUc 2 21 1726 1749 [mm9:12:103159568-103159591:-] 0.5509 147 7 -13.77 -0.1289 MIMAT0000145 mmu-miR-133a 110616 Atxn3 guCGACCAACUUCCCCUGGUUu |:||| | ||||||| uuGUUGGCUCUUUUGGACCAAc 2 21 260 281 [mm9:12:103161036-103161057:-] 0.5504 148 7 -16.17 -0.1646 MIMAT0000153 mmu-miR-141 110616 Atxn3 ggUAGAA-AUGGU--CUGUC-ACAAu ||:|| |:||| |||| |||| ccAUUUUGUGCCAACUACAGUUGUUu 2 21 1551 1576 [mm9:12:103159741-103159766:-] 0.5163 126 0 -19.55 -0.3363 MIMAT0000156 mmu-miR-144 110616 Atxn3 ucAUGUAGUAGAUAUGACAu ||: | | : ||||||| uaUAUUUAAAUAAUACUGUg 2 19 951 970 [mm9:12:103160347-103160366:-] 0.5789 150 7 -10.49 -0.3010 MIMAT0000163 mmu-miR-153 110616 Atxn3 cuagugaaaaCACUGAUACGUu || |||||||| cccaacgacaGU-ACUAUGCAg 2 13 2715 2735 [mm9:12:103158582-103158602:-] 0.5773 146 7 -13.39 -0.2888 MIMAT0000210 mmu-miR-181a 110616 Atxn3 ugaGUGGCUGUCGCAACUUACAa :||: || | ||||||| aagUACUUUCAAAG-UGAAUGUu 2 21 3328 3349 [mm9:12:103157968-103157989:-] 0.5119 146 7 -13.80 -0.1517 MIMAT0000225 mmu-miR-195 110616 Atxn3 cggUUAUAAAG--ACACGACGAu | || | | | ||||||| guaACUACUCCCGUAUGCUGCUc 2 19 1727 1749 [mm9:12:103159568-103159590:-] 0.5509 145 7 -10.69 -0.1341 MIMAT0000235 mmu-miR-202-3p 110616 Atxn3 agaAGGGUACGCGAUAUGGAga |: ||| : : |||||| aagUUGCAUAUUUAAUACCU-- 3 20 19 38 [mm9:12:103171136-103171155:-] 0.7141 131 0 -7.08 -0.4637 MIMAT0000236 mmu-miR-203 110616 Atxn3 gaucaccaggaUUUGUAAAGUg |:|||||||| caguacuaugcAGACAUUUCAc 2 12 2723 2744 [mm9:12:103158573-103158594:-] 0.5773 151 7 -14.58 -0.1911 MIMAT0000236 mmu-miR-203 110616 Atxn3 gauCACCAGGAU-UUGUAAAGUg | | |::|| ||||||| cuuGAGCUUUUACUUCAUUUCAg 2 20 355 377 [mm9:12:103160940-103160962:-] 0.5425 146 7 -8.56 -0.1462 MIMAT0004577 mmu-miR-299 110616 Atxn3 uucgccAAAUGGCAGGGUGUAu |||: ||||||| acacauUUUGAAUACCCACAUg 2 17 2984 3005 [mm9:12:103158312-103158333:-] 0.5882 144 7 -19.54 -0.5445 MIMAT0000526 mmu-miR-15a 110616 Atxn3 guguUUGGUAA---UACACGACGAu |||:| | :| ||||||| auguAACUACUCCCGUAUGCUGCUc 2 19 1725 1749 [mm9:12:103159568-103159592:-] 0.5509 149 7 -14.59 -0.1289 MIMAT0000527 mmu-miR-16 110616 Atxn3 gcggUUAUAAAUGC--ACGACGAu | || | || ||||||| uguaACUACUCCCGUAUGCUGCUc 2 19 1726 1749 [mm9:12:103159568-103159591:-] 0.5509 145 7 -11.00 -0.1341 MIMAT0000532 mmu-miR-23a 110616 Atxn3 ccUUUAGGGACCGUUA-CACUa ||: |||| ||| |||| ugAAGCCCCUUUGAAUGGUGAc 2 20 1197 1218 [mm9:12:103160099-103160120:-] 0.5474 123 0 -14.09 -0.1060 MIMAT0000538 mmu-miR-31 110616 Atxn3 gucgauAC-GGUCGUAGAACGGa || ::||| ||||||| accaacUGAUUAGC-UCUUGCCa 2 17 276 297 [mm9:12:103161020-103161041:-] 0.5504 149 7 -18.94 -0.2309 MIMAT0000539 mmu-miR-92a 110616 Atxn3 guccggcccUGUUCACGUUAu | | ||||||| uuguuuuucAAAUGUGCAAUa 2 13 217 237 [mm9:12:103161080-103161100:-] 0.6123 144 7 -10.07 -0.9457 MIMAT0000541 mmu-miR-96 110616 Atxn3 ucguuUUUA-CACGAUCACGGUUu ||:| |||| ||||||| uauuuAAGUCAUGCU-GUGCCAAg 2 19 3014 3036 [mm9:12:103158281-103158303:-] 0.5874 155 7 -17.78 -0.1636 MIMAT0000541 mmu-miR-96 110616 Atxn3 ucguuuuuacacGAUCACGGUUu :| ||||||| uuucuuagccauUUUGUGCCAAc 2 12 1543 1565 [mm9:12:103159752-103159774:-] 0.5163 143 7 -11.32 -0.3089 MIMAT0000546 mmu-miR-103 110616 Atxn3 aguAUCGGGACAUGUUACGACGa || :|| || ||||||| aacUACUCCCGU---AUGCUGCu 2 21 1729 1748 [mm9:12:103159569-103159588:-] 0.5509 148 7 -17.98 -0.1011 MIMAT0000548 mmu-miR-322 110616 Atxn3 agguuuuguacuuaACGACGAc ||||||| uaacuacucccguaUGCUGCUc 2 9 1728 1749 [mm9:12:103159568-103159589:-] 0.5509 140 7 -10.81 -0.1315 MIMAT0000565 mmu-miR-328 110616 Atxn3 ugccuucccGUCUC--UCCCGGUc ||| | ||||||| gugugauuaCAGUGUAAGGGCCAc 2 14 46 69 [mm9:12:103161248-103161271:-] 0.5550 144 7 -17.44 -0.1559 MIMAT0000647 mmu-miR-107 110616 Atxn3 acuAUCGGGACAUGUUACGACGa || :|| || ||||||| aacUACUCCCGU---AUGCUGCu 2 21 1729 1748 [mm9:12:103159569-103159588:-] 0.5509 148 7 -17.98 -0.1011 MIMAT0000652 mmu-miR-25 110616 Atxn3 agucuggcucUGUUCACGUUAc | | ||||||| uuuguuuuucAAAUGUGCAAUa 2 13 216 237 [mm9:12:103161080-103161101:-] 0.6123 144 7 -8.10 -0.9393 MIMAT0000654 mmu-miR-32 110616 Atxn3 acguuGAAUCAUUACACGUUAu :|| |||||||||| uuuguUUUUCAAAUGUGCAAUa 2 18 216 237 [mm9:12:103161080-103161101:-] 0.6123 157 7 -14.09 -0.9329 MIMAT0000656 mmu-miR-139-5p 110616 Atxn3 gacCUCUGUGCACGUGACAUCu ||||:| |||||||| gaaGAGAUAAAGACACUGUAGu 2 20 89 110 [mm9:12:103161207-103161228:-] 0.5550 159 7 -21.53 -0.1021 MIMAT0000666 mmu-miR-320 110616 Atxn3 agCGG-GAGA-GUUGGGUCGAAAa ||| | | || ::||||||| aaGCCAAUAUACACUUCAGCUUUa 2 21 1851 1874 [mm9:12:103159443-103159466:-] 0.5865 150 7 -15.89 -0.8256 MIMAT0000673 mmu-miR-181b 110616 Atxn3 uggGUGGCUGUCGUUACUUACAa :||: || |:||||||| aagUACUUUCA-AAGUGAAUGUu 2 21 3328 3349 [mm9:12:103157968-103157989:-] 0.5119 150 7 -15.31 -0.1634 MIMAT0000673 mmu-miR-181b 110616 Atxn3 ugGGUGGC-UGUCGUUACU-UACAa | | :| | ||| |||| |||| aaCAAGUGUAGAGCUAUGAUAUGUg 2 22 3367 3391 [mm9:12:103157926-103157950:-] 0.5342 124 0 -12.05 -0.2890 MIMAT0000674 mmu-miR-181c 110616 Atxn3 ugaGUGGCUGUCCAACUUACAa :||: || ||||||| aagUACUUUCAAAGUGAAUGUu 2 20 3328 3349 [mm9:12:103157968-103157989:-] 0.5119 147 7 -13.24 -0.1650 MIMAT0000679 mmu-miR-217 110616 Atxn3 agguCA-GUCAAGGACUACG-UCAu || ||| | |||||| ||| augcGUACAG-CCGUGAUGCUAGUg 2 20 2395 2418 [mm9:12:103158899-103158922:-] 0.5741 120 0 -18.48 -0.2024 MIMAT0000708 mmu-miR-363 110616 Atxn3 augucuaccuaUGGCACGUUAa | :||||||| uuuguuuuucaAAUGUGCAAUa 2 12 216 237 [mm9:12:103161080-103161101:-] 0.6123 143 7 -9.71 -0.9361 MIMAT0000741 mmu-miR-377 110616 Atxn3 uguUUUCAACGGAAACACACUa || |||:| ||||||| uguAACAUUGUC--UGUGUGAu 2 20 33 52 [mm9:12:103161265-103161284:-] 0.5550 152 7 -14.86 -0.1001 MIMAT0000766 mmu-miR-335-5p 110616 Atxn3 uguaaaaagcAAUAA-CGAGAACu | ||| ||||||| uuggaccaacUGAUUAGCUCUUGc 2 14 272 295 [mm9:12:103161022-103161045:-] 0.5504 148 7 -11.16 -0.1826 MIMAT0000769 mmu-miR-133b 110616 Atxn3 auCGACCAACUUCCCCUGGUUu |:||| | ||||||| uuGUUGGCUCUUUUGGACCAAc 2 21 260 281 [mm9:12:103161036-103161057:-] 0.5504 148 7 -16.17 -0.1646 MIMAT0001076 mmu-miR-384-3p 110616 Atxn3 uaACACUUGUUA-AA---GAUCCUUa | |||: |:| || ||||||| uaUCUGAG-AGUCUUAAGCUAGGAAa 2 21 3110 3134 [mm9:12:103158183-103158207:-] 0.5210 144 7 -11.53 -0.2451 MIMAT0001091 mmu-miR-410 110616 Atxn3 ugUCCGGUAGA-C--ACAAUAUAa | ||: |:| | |||||||| ugAAGCUUUUUAGUUUGUUAUAUu 2 20 1999 2022 [mm9:12:103159295-103159318:-] 0.5596 149 7 -9.63 -0.5208 MIMAT0001092 mmu-miR-376b 110616 Atxn3 uuCACCUACAAGGAGAUACUa ||| | | :||||||| aaGUGUA-GGAGUUCUAUGAc 2 20 2168 2187 [mm9:12:103159130-103159149:-] 0.5598 145 7 -12.88 -0.1774 MIMAT0001092 mmu-miR-376b 110616 Atxn3 uucaccuacaaggAGAUACUa ||||||| uccuauuuuaaaaUCUAUGAa 2 9 1609 1629 [mm9:12:103159688-103159708:-] 0.5163 140 7 -7.36 -0.6961 MIMAT0004750 mmu-miR-425 110616 Atxn3 agUUGCCCUCACUAGCACAGUAa || || || || ||||||| agAAAGGCAGAAAU-GUGUCAUa 2 22 122 143 [mm9:12:103161174-103161195:-] 0.5849 159 7 -13.50 -0.3604 MIMAT0004750 mmu-miR-425 110616 Atxn3 aguugcccuCACUAGCACAGUAa || || ||||||| ugugucuuuGUCAUGGUGUCAUa 2 15 1139 1161 [mm9:12:103160156-103160178:-] 0.5433 154 7 -11.19 -0.2720 MIMAT0003112 mmu-miR-489 110616 Atxn3 cgACGGUAUAUA-CACCACAGUAa ||:| | |:| ||||||||| ugUGUC-UUUGUCAUGGUGUCAUa 2 22 1139 1161 [mm9:12:103160156-103160178:-] 0.5433 158 7 -17.94 -0.2697 MIMAT0003112 mmu-miR-489 110616 Atxn3 cgaCGGUAUAUACACCACAGUAa | || | || ||||||| aaaGGCAGAAAU---GUGUCAUa 2 21 124 143 [mm9:12:103161174-103161193:-] 0.5849 144 7 -9.31 -0.3633 MIMAT0003130 mmu-miR-486 110616 Atxn3 gagcccCGUCGAGUCAUGUCcu |:|| |::|||||| -----aGUAG-UUGGUACAGau 3 17 1 16 [mm9:12:103171158-103171173:-] 0.7141 134 0 -15.16 -0.5138 MIMAT0003168 mmu-miR-543 110616 Atxn3 uucuucACGUGGCGCUUACAAa | || |:||||||| aguacuUUCAAAGUGAAUGUUu 2 17 3329 3350 [mm9:12:103157967-103157988:-] 0.5119 152 7 -14.80 -0.2376 MIMAT0003181 mmu-miR-367 110616 Atxn3 agugguAACGAUUUCACGUUAa || | || ||||||| uuuguuUUUCAAAUGUGCAAUa 2 17 216 237 [mm9:12:103161080-103161101:-] 0.6123 156 7 -8.96 -0.9296 MIMAT0003182 mmu-miR-494 110616 Atxn3 cuccaaaGGGCACAUACAAAGu |:: | |||||||| ucaugagCUUAUCUAUGUUUCa 2 16 2648 2669 [mm9:12:103158648-103158669:-] 0.5640 151 7 -11.43 -0.4251 MIMAT0003182 mmu-miR-494 110616 Atxn3 cuccaaAGGGCACAUACAAAGu |||: | ||||||| acuugaUCCUAU-AAUGUUUCg 2 17 302 322 [mm9:12:103160995-103161015:-] 0.5504 146 7 -12.10 -0.2217 MIMAT0003183 mmu-miR-376c 110616 Atxn3 ugcACUUUAAAGGAGAUACAa |||: || ||||||| ucaUGAGCUU--AUCUAUGUu 2 19 2648 2666 [mm9:12:103158651-103158669:-] 0.5640 147 7 -11.46 -0.4382 MIMAT0003183 mmu-miR-376c 110616 Atxn3 ugCACUUUAAAGGAGA-UACAa |||: ||||:|||| |||| ugGUGGUAUUUUCUCUAAUGUg 2 20 468 489 [mm9:12:103160828-103160849:-] 0.5077 143 0 -18.77 -0.1377 MIMAT0003729 mmu-miR-216b 110616 Atxn3 agugUAAACGGACGUCUCUAAa | | |:: |:| ||||| ----AGUAGUUGGUACAGAUUa 2 19 1 18 [mm9:12:103171156-103171173:-] 0.7141 122 0 -6.00 -0.1123 MIMAT0003730 mmu-miR-592 110616 Atxn3 uguaguagCGUAUAACUGUGUUa ||| | ||||||| aagaggagGCAGA-GGACACAAa 2 16 681 702 [mm9:12:103160615-103160636:-] 0.5681 145 7 -12.74 -0.1244 MIMAT0003889 mmu-miR-758 110616 Atxn3 aucaccuggUCCAGUGUUu | ||||||| gaauuacagAAGUCACAAa 2 11 1005 1023 [mm9:12:103160294-103160312:-] 0.5615 142 7 -13.07 -0.6236 MIMAT0003738 mmu-miR-496 110616 Atxn3 cucuaaccgGUACAUU-AUGAGu :|||||| ||||| auacugaagUAUGUAACUACUCc 2 14 1715 1737 [mm9:12:103159580-103159602:-] 0.5509 125 0 -11.73 -0.1125 MIMAT0003450 mmu-miR-488 110616 Atxn3 cugguUCUUUGUCG-GAAAGUu :|||| | | |||||| ccuuuGGAAAGAUCACUUUCAu 2 17 2615 2636 [mm9:12:103158681-103158702:-] 0.5587 124 6 -10.82 -0.1345 MIMAT0003453 mmu-miR-497 110616 Atxn3 auguuUGGUGUCACACGACGAc ||: | || ||||||| uaacuACUCCCGUAUGCUGCUc 2 18 1728 1749 [mm9:12:103159568-103159589:-] 0.5509 157 7 -16.64 -0.1302 MIMAT0003456 mmu-miR-495 110616 Atxn3 uucUUCACGUGGUACAAACAAa ||||| | ||||||||| ucaAAGUG-A--AUGUUUGUUg 2 20 3336 3354 [mm9:12:103157963-103157981:-] 0.5411 158 7 -15.39 -0.4932 MIMAT0003456 mmu-miR-495 110616 Atxn3 uuCUUCACGUGGUACAAACAAa |||| : ::| ||||||| guGAAGCUUUUUA-GUUUGUUa 2 21 1998 2018 [mm9:12:103159299-103159319:-] 0.5596 150 7 -10.21 -0.7474 MIMAT0003456 mmu-miR-495 110616 Atxn3 uucUUCACGUGGUAC-AAACAAa |:| |:| : || |||||| caaAGGAGUAGUCUGCUUUGUUu 2 20 2908 2930 [mm9:12:103158387-103158409:-] 0.5692 123 6 -14.59 -0.2017 MIMAT0003482 mmu-miR-499 110616 Atxn3 uuuguaguGACGUUCAGAAUu ||| :||||||| ugugcuauCUGAGAGUCUUAa 2 14 3105 3125 [mm9:12:103158192-103158212:-] 0.5210 153 7 -14.20 -0.1252 MIMAT0004324 mmu-miR-181d 110616 Atxn3 uggGUGGCUGUUGUUACUUACAa :||: ||| |:||||||| aagUACUUUCAA-AGUGAAUGUu 2 21 3328 3349 [mm9:12:103157968-103157989:-] 0.5119 158 7 -16.45 -0.1634 MIMAT0004324 mmu-miR-181d 110616 Atxn3 ugGGUGGC-UGUUGUUACU-UACAa | | :| | |:| |||| |||| aaCAAGUGUAGAGCUAUGAUAUGUg 2 22 3367 3391 [mm9:12:103157926-103157950:-] 0.5342 120 0 -9.89 -0.2915 MIMAT0004869 mmu-miR-421 110616 Atxn3 cgcggguuaaUUACAGACA-ACUa | ||||||| ||| acuuuguaacAUUGUCUGUGUGAu 2 14 29 52 [mm9:12:103161265-103161288:-] 0.5550 121 0 -13.36 -0.1159 MIMAT0004896 mmu-miR-590-3p 110616 Atxn3 ugAUCGAAUAUGUAUUU-UAAu |||:|| |: ||||| ||| cuUAGUUU-UG-AUAAACAUUa 2 20 1056 1075 [mm9:12:103160242-103160261:-] 0.5433 123 0 -6.90 -0.2549 MIMAT0004899 mmu-miR-92b 110616 Atxn3 ccuccggcccugcuCACGUUAu ||||||| uuuguuuuucaaauGUGCAAUa 2 9 216 237 [mm9:12:103161080-103161101:-] 0.6123 140 7 -9.96 -0.9457 MIMAT0005850 mmu-miR-1192 110616 Atxn3 uuaaaccaGACAAA-CAAACAAa || ||| ||||||| gagugaagCUUUUUAGUUUGUUa 2 15 1996 2018 [mm9:12:103159299-103159321:-] 0.5596 153 7 -8.02 -0.7722 MIMAT0005850 mmu-miR-1192 110616 Atxn3 uuaaaccagACAAACAAACAAa || |||||||| cuuucaaagUGAAUGUUUGUUg 2 14 3333 3354 [mm9:12:103157963-103157984:-] 0.5411 149 7 -8.07 -0.5036 MIMAT0005850 mmu-miR-1192 110616 Atxn3 uuAAACCAGACAAACA-AACAAa | | |:| | ||| ||||| aaUGUCUUUUAUAUGUCUUGUUa 2 21 393 415 [mm9:12:103160902-103160924:-] 0.5166 120 0 -6.18 -0.3694

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G063864 Atxn3 Mus musculus 110616

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Atxn3 mcmv-miR-M44-1 beg:1352 end:1367 pic:3' TGGCGCCGAGACCTTTTTCTAT 5'& || |||||||||| &5' ---------CT-GAAAAAGATA 3' Atxn3 mghv-miR-M1-9 beg:216 end:233 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& ||.. |||||||| &5' ------GTTTTT-CAAATGTG- 3' Atxn3 mghv-miR-M1-9 beg:3092 end:3109 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& || | |||||||| &5' -----GGAACC--CAAATGTG- 3' Atxn3 mmu-miR-193star beg:2568 end:2587 pic:3' AGTAGAACGGGCGT----TTCTGGGT 5'& |.||| ||||||| &5' ---------CTGCACAGTAAGACCC- 3' Atxn3 mmu-miR-704 beg:1740 end:1758 pic:3' GATCCTCGTCTCGTGTACAGA 5'& || | ||||||||| &5' ------GCTGCTCACATGTCT 3' Atxn3 mmu-miR-30estar beg:1343 end:1360 pic:3' CGACATTTGTAGGCTGACTTTC 5'& |||| || ||||||| &5' GCTG------TCTAACTGAAA- 3' Atxn3 mmu-miR-26bstar beg:1498 end:1517 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& ||| .|| |||||||| &5' ---CCA---GATCCAGAACAGG 3' Atxn3 mmu-miR-148astar beg:295 end:306 pic:3' TCAGCCTCACAGAGTCTTGAAA 5'& |||||||| &5' -------------CAGAACTT- 3' Atxn3 mmu-miR-216b beg:1231 end:1249 pic:3' AGTGTAAACGGACG--TCTCTAAA 5'& |.| ||||||| &5' --------GTCCAAGAAGAGATT- 3' Atxn3 mmu-miR-877star beg:680 end:699 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||||||| |||||||| &5' ---GAGGAGGC---AGAGGACA 3' Atxn3 mmu-miR-680 beg:837 end:849 pic:3' GGGGGTACAGTCGTCTACGGG 5'& .|||||||. &5' ------------TAGATGCCT 3' Atxn3 mmu-miR-328 beg:52 end:69 pic:3' TGCCTTCCCGTCTC--TCCCGGTC 5'& ||| | ||||||| &5' ---------CAGTGTAAGGGCCA- 3' Atxn3 mmu-miR-138star beg:2115 end:2126 pic:3' GGGACCACAACACTTCATCGGC 5'& .||||||| &5' -------------GAGTAGCC- 3' Atxn3 mmu-miR-1-2-as beg:1717 end:1730 pic:3' ACCTTACATTTCTTCATACAT 5'& |||||||||| &5' -----------GAAGTATGTA 3' Atxn3 mmu-miR-1897-5p beg:2159 end:2171 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& .|||||||| &5' -------------TATCCAAAG 3' Atxn3 mmu-miR-103 beg:1733 end:1749 pic:3' AGTATCGGGACATGTTACGACGA 5'& ||| |||||||| &5' ------CCCGT----ATGCTGCT 3' Atxn3 mmu-miR-107 beg:1733 end:1749 pic:3' ACTATCGGGACATGTTACGACGA 5'& ||| |||||||| &5' ------CCCGT----ATGCTGCT 3' Atxn3 mmu-miR-338-3p beg:2465 end:2482 pic:3' GTTGTTTTAGT-GACTACGACCT 5'& || .||||||||| &5' --------TCCTTTGATGCTGG- 3' Atxn3 mmu-miR-295star beg:1982 end:2000 pic:3' CTTCACACGGGGTGTAAACTCA 5'& || .| .|||||||| &5' ------TGAATC-TATTTGAGT 3' Atxn3 mmu-miR-3470a beg:3326 end:3345 pic:3' GGTCGGACCAGATGTTTCACT 5'& ||. |.| |||||||| &5' --AGTAC--TTT-CAAAGTGA 3' Atxn3 mmu-miR-466k beg:1969 end:1985 pic:3' AGTGTACATGTACATGTGTGTGT 5'& || || .||||||| &5' --------AC-TGAGCACACAC- 3' Atxn3 mmu-miR-34b-5p beg:2249 end:2259 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& ||||||| &5' ---------------CACTGCC- 3' Atxn3 mmu-miR-654-3p beg:2440 end:2459 pic:3' TTCCACTACCAGTC-GTCTGTAT 5'& ||| .| |||||||. &5' -------TGGAAGGCCAGACATG 3' Atxn3 mmu-miR-320 beg:1859 end:1874 pic:3' AGCGGGAGAGTTGGGTCGAAAA 5'& || ..||||||| &5' ---------CACTTCAGCTTT- 3' Atxn3 mmu-miR-874 beg:3074 end:3092 pic:3' AGCCAGGGAGCCCGGTCCCGTC 5'& || || | |||||||| &5' --GG-CCA--GA--CAGGGCAG 3' Atxn3 mmu-miR-412 beg:2763 end:2781 pic:3' GCCGATCACCTGGTCCACTT 5'& | |||| |||||||| &5' --GTCAGTG---CAGGTGAA 3' Atxn3 mmu-miR-203 beg:2731 end:2745 pic:3' GATCACCAGGATTTGTAAAGTG 5'& |.||||||||| &5' -----------AGACATTTCAC 3' Atxn3 mmu-miR-763 beg:661 end:677 pic:3' CGGTGACCAAGAAG-GGTCGACC 5'& ||||| ||||||| &5' ---------TCTTCTCCAGCTG- 3' Atxn3 mmu-miR-465a-3p beg:1157 end:1173 pic:3' AGATGAATCTTTCCGGGACTAG 5'& |||| ||||||| &5' ------TAGATA--CCCTGAT- 3' Atxn3 mmu-miR-465b-3p beg:1157 end:1173 pic:3' AGATGAATCTTTCCGGGACTAG 5'& |||| ||||||| &5' ------TAGATA--CCCTGAT- 3' Atxn3 mmu-miR-465c-3p beg:1157 end:1173 pic:3' AGATGAATCTTTCCGGGACTAG 5'& |||| ||||||| &5' ------TAGATA--CCCTGAT- 3' Atxn3 mmu-miR-1943 beg:1171 end:1191 pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& || |||.. ||||||| &5' -CC---TGCTTTCC-CCTCCCT- 3' Atxn3 mmu-miR-1943 beg:634 end:660 pic:3' AGGTCCACGGGTC---TA-GGAGGGAA 5'& || |||| .| |||.|||| &5' ----GGAGCCCTTCCTGTACCTTCCTT 3' Atxn3 mmu-miR-3475 beg:3167 end:3187 pic:3' AAGTTTGGTACAC------GGAGGTCT 5'& ||| |||||||| &5' ----------GTGTTGAAACCTCCAGA 3' Atxn3 mmu-let-7a beg:1470 end:1489 pic:3' TTGATATGTTGGAT-GATGGAGT 5'& .||| | ||||||| &5' ------GCAAGCGCCCTACCTC- 3' Atxn3 mmu-let-7b beg:1470 end:1489 pic:3' TTGGTGTGTTGGAT-GATGGAGT 5'& .||| | ||||||| &5' ------GCAAGCGCCCTACCTC- 3' Atxn3 mmu-let-7c beg:1470 end:1489 pic:3' TTGGTATGTTGGAT-GATGGAGT 5'& .||| | ||||||| &5' ------GCAAGCGCCCTACCTC- 3' Atxn3 mmu-let-7g beg:1470 end:1489 pic:3' TTGACATGTTTGAT-GATGGAGT 5'& .|||.| ||||||| &5' ------GCAAGCGCCCTACCTC- 3' Atxn3 mmu-let-7i beg:1470 end:1489 pic:3' TTGTCGTGTTTGAT-GATGGAGT 5'& .|||.| ||||||| &5' ------GCAAGCGCCCTACCTC- 3' Atxn3 mmu-let-7d beg:1470 end:1490 pic:3' TTGATACGTTGGAT-GATGGAGA 5'& |||| | |||||||| &5' ------GCAAGCGCCCTACCTCT 3' Atxn3 mmu-miR-1961 beg:1473 end:1489 pic:3' AAGATTGAT-GATGGAGT 5'& |.| ||||||| &5' ----AGCGCCCTACCTC- 3' Atxn3 mmu-miR-665 beg:616 end:635 pic:3' TCCCTGGAGTCGGAGGACCA 5'& || |.|. ||||||| &5' AGTGGCTGA---CTCCTGG- 3' Atxn3 mmu-miR-330star beg:553 end:580 pic:3' AGAGACGTC---CGGGACACGAAACG 5'& |||||||| ||.|||| | |||. &5' -CTCTGCAGTCAGCTCTGTTC-TTGT 3' Atxn3 mmu-miR-291a-5p beg:2461 end:2478 pic:3' TCTCTCCCGGAGGTGAAACTAC 5'& |. |.| |||||||| &5' -------GTGTTC-CTTTGATG 3' Atxn3 mmu-miR-543 beg:3334 end:3351 pic:3' TTCTTCACGTGGCGCTTACAAA 5'& || |.|||||||| &5' --------CAAAGTGAATGTTT 3' Atxn3 mmu-miR-592 beg:686 end:702 pic:3' TGTAGTAGCGTATAACTGTGTTA 5'& ||| ||||||| &5' --------GCAGAG-GACACAA- 3' Atxn3 mmu-miR-540-5p beg:965 end:983 pic:3' TGTCTCAGTCTCCC-ACTGGGAAC 5'& | ||| ||||||||| &5' ---------GTGGGTTGACCCTTG 3' Atxn3 mmu-miR-696 beg:1295 end:1311 pic:3' GGGTGTCGTT-CGTGTGCG 5'& || |||||||. &5' ------GCTCTGCACACGT 3' Atxn3 mmu-miR-335-5p beg:285 end:295 pic:3' TGTAAAAAGCAATAACGAGAACT 5'& ||||||| &5' ---------------GCTCTTG- 3' Atxn3 mmu-miR-133a beg:262 end:281 pic:3' GTCGACCAACTTCCCCTGGTTT 5'& .||| ||||||| &5' ---TTGGCTCTTTTGGACCAA- 3' Atxn3 mmu-miR-133b beg:262 end:281 pic:3' ATCGACCAACTTCCCCTGGTTT 5'& .||| ||||||| &5' ---TTGGCTCTTTTGGACCAA- 3' Atxn3 mmu-miR-324-3p beg:3075 end:3094 pic:3' TC-GTCGTGGACCCCGTCACC 5'& .| ||| || |||||||| &5' GGCCAG-ACA--GGGCAGTG- 3' Atxn3 mmu-miR-2183 beg:3244 end:3262 pic:3' TCCTCCAGTCCCCAAGTT 5'& ||| | |||||||. &5' ---AGGCCTTGGGTTCAG 3' Atxn3 mmu-miR-200cstar beg:2567 end:2585 pic:3' GGTTTGTGACGACCCATTCTGC 5'& .|||| ||||||| &5' ------GCTGCACAGTAAGAC- 3' Atxn3 mmu-miR-24-2star beg:2493 end:2511 pic:3' TGACAAAGTCGAGTCATCCGTG 5'& ||| ||| .||||||| &5' -CTG---CAGA--GGTAGGCA- 3' Atxn3 mmu-miR-24-1star beg:2496 end:2511 pic:3' TGACTATAGTCGAGTCATCCGTG 5'& ||| .||||||| &5' --------CAGA--GGTAGGCA- 3' Atxn3 mmu-miR-758 beg:1008 end:1024 pic:3' ATCACCTGGTC--CAGTGTTT 5'& ||| |||||||| &5' --------CAGAAGTCACAAA 3' Atxn3 mmu-miR-32 beg:224 end:238 pic:3' ACGTTGAATCATTACACGTTAT 5'& ||||||||||| &5' -----------AATGTGCAATA 3' Atxn3 mmu-miR-363 beg:226 end:237 pic:3' ATGTCTACCTATGGCACGTTAA 5'& .||||||| &5' -------------TGTGCAAT- 3' Atxn3 mmu-miR-92a beg:227 end:238 pic:3' GTCCGGCCCTGTTCACGTTAT 5'& |||||||| &5' -------------GTGCAATA 3' Atxn3 mmu-miR-92b beg:227 end:238 pic:3' CCTCCGGCCCTGCTCACGTTAT 5'& |||||||| &5' --------------GTGCAATA 3' Atxn3 mmu-miR-96 beg:3022 end:3037 pic:3' TCGTTTTTACACGATCACGGTTT 5'& |||| |||||||. &5' ----------TGCT-GTGCCAAG 3' Atxn3 mmu-miR-489 beg:1143 end:1161 pic:3' CGACGGTATATACACCACAGTAA 5'& .||.|| ||||||||| &5' -TTGTCA------TGGTGTCAT- 3' Atxn3 mmu-miR-489 beg:124 end:143 pic:3' CGACGGTATATACACCACAGTAA 5'& | || ||||||| &5' ---GGCAGAAAT---GTGTCAT- 3' Atxn3 mmu-miR-495 beg:3336 end:3354 pic:3' TTCTTCACGTGGTACAAACAAA 5'& ||||| ||||||||| &5' ---AAGTGA---ATGTTTGTT- 3' Atxn3 mcmv-miR-m01-1 beg:2501 end:2522 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& || |.| ||||.||. &5' --GTA-GGCAGATTTCTTCTT- 3' Atxn3 mcmv-miR-m01-3 beg:835 end:857 pic:3' AGCTCCGTTGTCA----GCGAAGTGGC 5'& ||.|| .|||||||. &5' -------AATAGATGCCTGCTTCACT- 3' Atxn3 mcmv-miR-m108-2-5p.1 beg:604 end:627 pic:3' GCC-ACGAGCGCAGCTCACTGGCG 5'& || ||| | .| |||||.|.| &5' -GGATGC-CCTGA-GAGTGGCTG- 3' Atxn3 mcmv-miR-m108-2-5p.2 beg:1980 end:2001 pic:3' CACTGGCGAGCGCT-GCTCACT 5'& ||.| .|||||| &5' ---ACTGAATCTATTTGAGTGA 3' Atxn3 mcmv-miR-m21-1 beg:537 end:556 pic:3' GC-CGAACTTGCACAGGGGATA 5'& | ||| .| |||.||| &5' -GTGCT---GCAT-TCCTCTA- 3' Atxn3 mcmv-miR-M44-1 beg:78 end:98 pic:3' TGGCGCCGAGACC-TTTTTCTAT 5'& |.|| .||.||||| &5' ------GTTCACCAGAAGAGATA 3' Atxn3 mghv-miR-M1-5 beg:554 end:572 pic:3' CTCTGCTGGGCTAGAGTTGAGA 5'& .|.| |||.|||| &5' -------TCTGCAGTCAGCTCT 3' Atxn3 mmu-let-7b beg:2695 end:2715 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& |||||.| ||.|||| ||| &5' AACCATA-AATCTAC-ACC--- 3' Atxn3 mmu-let-7c beg:2695 end:2715 pic:3' TTGGTATGTTGGATGATGGAGT 5'& ||||||| ||.|||| ||| &5' AACCATA-AATCTAC-ACC--- 3' Atxn3 mmu-let-7e beg:1466 end:1489 pic:3' TTGATATGTTGGA-GGATGGAGT 5'& .||| .||| | |||||||| &5' -GCTAGGCAAGCGCCCTACCTC- 3' Atxn3 mmu-let-7f beg:1479 end:1489 pic:3' TTGATATGTTAGATGATGGAGT 5'& ||||||| &5' --------------CTACCTC- 3' Atxn3 mmu-let-7gstar beg:3277 end:3299 pic:3' CGTTC-CGTCACCGGACATGTCA 5'& .|| ||||||||. ||||| &5' --GAGAGCAGTGGCTC--ACAGT 3' Atxn3 mmu-miR-101astar beg:1338 end:1359 pic:3' CGTAGTCGTGACACTATTGACT 5'& |.| .|||| ||||||| &5' ---TTATTGCTGTC-TAACTGA 3' Atxn3 mmu-miR-101astar beg:229 end:247 pic:3' CGTAGTCGTGACACTATTGACT 5'& ||| |.||||| &5' ------GCAATATC-TGACTGA 3' Atxn3 mmu-miR-101astar beg:567 end:586 pic:3' CGTAGTCGTGACAC---TATTGACT 5'& |||| .||||||| &5' ---------CTGTTCTTGTAACTGA 3' Atxn3 mmu-miR-103 beg:3017 end:3031 pic:3' AGTATCGGGACATGTTACGACGA 5'& ||.| ||||||. &5' ----AGTC-------ATGCTGT- 3' Atxn3 mmu-miR-103 beg:529 end:547 pic:3' AGTATCGGGACATGTTACGACGA 5'& .||| .|||||| &5' ------TCCTAATT-GTGCTGC- 3' Atxn3 mmu-miR-106b beg:2915 end:2936 pic:3' TAGACGTGACAGTCGTGAAAT 5'& .||||| .|||. .|||| &5' GTCTGCTTTGTTT-TACTT-- 3' Atxn3 mmu-miR-106bstar beg:1450 end:1469 pic:3' CGTCGTTCATGGGTGTCACGCC 5'& ||.| .|| |||||.| &5' ----CAGG-GCCTCCAGTGTG- 3' Atxn3 mmu-miR-107 beg:3017 end:3031 pic:3' ACTATCGGGACATGTTACGACGA 5'& ||.| ||||||. &5' ----AGTC-------ATGCTGT- 3' Atxn3 mmu-miR-1 beg:2174 end:2193 pic:3' TATGTATGAAGAAA-TGTAAGGT 5'& | |||| ||||||.| &5' ------AGTTCTATGACATTCTA 3' Atxn3 mmu-miR-1 beg:537 end:552 pic:3' TATGTATGAAGAAATGTAAGGT 5'& .|.|| .|||||| &5' ----GTGCT-----GCATTCC- 3' Atxn3 mmu-miR-1 beg:2722 end:2744 pic:3' TATGTATGAAGAAA-TGTAAGGT 5'& .|||| |||||.|| &5' ----GTACTATGCAGACATTTCA 3' Atxn3 mmu-miR-1 beg:357 end:377 pic:3' TATGTATGAAGAAAT-GTAAGGT 5'& .|||.| ||||.|| &5' ------GCTTTTACTTCATTTCA 3' Atxn3 mmu-miR-1188 beg:17 end:32 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& ||. |||||||. &5' -----GCTA---CTCACACT- 3' Atxn3 mmu-miR-1192 beg:1416 end:1438 pic:3' TTAAACCAGA-CAAACAAACAAA 5'& .||||||.| ||||| |||| &5' -GTTTGGTTTGGTTTGGTTGT-- 3' Atxn3 mmu-miR-1193 beg:2072 end:2086 pic:3' CTATCATTTTGCCC-ACTGGAT 5'& ||| ||||||| &5' -----------GGGTTGACCTA 3' Atxn3 mmu-miR-1193 beg:3375 end:3396 pic:3' CTATC-ATTTTGCCCACTGGAT 5'& || || .|. ||||||| &5' ---AGCTATGATATGTGACCT- 3' Atxn3 mmu-miR-1196 beg:2495 end:2516 pic:3' TCCGTCTCCGTCCATCTAAA 5'& |||||||.||| |||||| &5' --GCAGAGGTAGGCAGATTT 3' Atxn3 mmu-miR-1197 beg:1124 end:1147 pic:3' TCTTCATCTGGTACACAGGAT 5'& .||| | ||. ||||||.| &5' GGAAATTAACTCTGTGTCTT- 3' Atxn3 mmu-miR-1197 beg:2449 end:2472 pic:3' TCTTCATC-TGGTACACAGGAT 5'& ||| |.| .|..||| |||| &5' AGACATGGTGCTGTGT-TCCT- 3' Atxn3 mmu-miR-122 beg:1850 end:1869 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& .||| .|||||.|| &5' -----GCCAATA-TACACTTCA 3' Atxn3 mmu-miR-1224 beg:644 end:666 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& || .||||.||. ||||| | &5' CTGTACCTTCCT--TCCTCTC 3' Atxn3 mmu-miR-125a-5p beg:1302 end:1323 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& |||| ||| ||||||| &5' -CACACGTTTTTA----TCAGGGA 3' Atxn3 mmu-miR-125b-5p beg:1301 end:1323 pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& |||| ||| ||||||| &5' -CACACGTTTTTA--TCAGGGA 3' Atxn3 mmu-miR-125bstar beg:1201 end:1223 pic:3' TCCAGGGTT-CTTGG-ACTGAACA 5'& ||| |||. |||||||| &5' ----CCCTTTGAATGGTGACTTGT 3' Atxn3 mmu-miR-127star beg:837 end:855 pic:3' TAGTCT-CGGGAGACTCGAAGTC 5'& .||| |||. |||||| &5' --TAGATGCCT-----GCTTCA- 3' Atxn3 mmu-miR-129-5p beg:113 end:135 pic:3' CGTTCGGGTCTGG-CGTTTTTC 5'& |.|||| ||| |||.||| &5' GTAAGC--AGAAAGGCAGAAA- 3' Atxn3 mmu-miR-1-2-as beg:2316 end:2334 pic:3' ACCTTACATTTCTTCATACAT 5'& |||||| ||||||| &5' ---AATGTATT---GTATGTA 3' Atxn3 mmu-miR-139-3p beg:3247 end:3268 pic:3' GAGGTTGTCCCGGCGCAGAGGT 5'& || |||.. |||||.| &5' --CCTT--GGGTTCAGTCTCTA 3' Atxn3 mmu-miR-139-5p beg:89 end:110 pic:3' GACCTCTGTGCACGTGACATCT 5'& ||||.| |||||||| &5' ---GAGATAAAGACACTGTAG- 3' Atxn3 mmu-miR-140 beg:2611 end:2631 pic:3' GATGGTATCCCATTTTGGTGAC 5'& ||| || ||.|.|||| &5' --ACCTTT-GGAAAGATCACT- 3' Atxn3 mmu-miR-141 beg:2401 end:2422 pic:3' GGTAGAAATGGT-CTG---TCACAAT 5'& .||. ||. ||||||| &5' --------GCCGTGATGCTAGTGTTA 3' Atxn3 mmu-miR-141star beg:3261 end:3282 pic:3' AGGTTGTGACGTGACCTTCTAC 5'& ||.||||||||| |.||| &5' TCTAACACTGCAAAAGGAGA-- 3' Atxn3 mmu-miR-142-3p beg:3117 end:3139 pic:3' AGGTATTTC-ATCCTTTGTGATGT 5'& ||. ||| |||||||. ||. &5' TCTT--AAGCTAGGAAAT-CTG-- 3' Atxn3 mmu-miR-143 beg:355 end:377 pic:3' CTCGATGTCACGAAGTAGAGT 5'& ||||| ||||||.||| &5' GAGCTTTTA--CTTCATTTCA 3' Atxn3 mmu-miR-143 beg:2723 end:2744 pic:3' CTCGATGTCACGAA-GTAGAGT 5'& ||| ||| |||.||| &5' ----TACTATGCAGACATTTCA 3' Atxn3 mmu-miR-144 beg:949 end:970 pic:3' TCATGTAGTAGA--TATGACAT 5'& ||.||. |||||||. &5' --TATATTTAAATAATACTGTG 3' Atxn3 mmu-miR-145star beg:2199 end:2210 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||||.| &5' --------------CCAGGAGT 3' Atxn3 mmu-miR-145star beg:3112 end:3134 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& .|||. |.||||| &5' -GAGAGTCTTAAG-CTAGGAA- 3' Atxn3 mmu-miR-146b beg:3245 end:3266 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& .|||| ||| .||||| |||| &5' GGCCT-TGG-GTTCAG-TCTC- 3' Atxn3 mmu-miR-147 beg:1291 end:1309 pic:3' ATCGTCTTCGTAA-AGGCGTGTG 5'& |..| ||.|||||| &5' --------GTGTGCTCTGCACAC 3' Atxn3 mmu-miR-150star beg:3011 end:3034 pic:3' GATAGGG--GGTCCGGACATGGTC 5'& ||||.. .|| | ||||.||| &5' CTATTTAAGTCATG-CTGTGCCA- 3' Atxn3 mmu-miR-151-3p beg:2522 end:2545 pic:3' GGAGTTCC--TCGGAGTCAGATC 5'& .|||||| ||||| .||||| &5' -TTCAAGGCCAGCCT-GGTCTA- 3' Atxn3 mmu-miR-151-3p beg:413 end:432 pic:3' GGAGTTCCTCGGAGTCAGATC 5'& ||. || |||||||. &5' ---CAGAAAGA-TCAGTCTG- 3' Atxn3 mmu-miR-151-3p beg:2961 end:2980 pic:3' GGAGTTCCTCGGAGTCAGATC 5'& .||. |.| |||||| &5' -TTCGT---GTCAGAGTCTA- 3' Atxn3 mmu-miR-151-3p beg:902 end:925 pic:3' GGA-GTTCCT-CGGAGTCAGATC 5'& || | |||| | ..|||||| &5' -CTGCTAGGATGA--TGGTCTAG 3' Atxn3 mmu-miR-152 beg:318 end:340 pic:3' GGTTCAAGACAGTACGTGACT 5'& |. |||| || ||||.||. &5' -CGTTTTCTCTC-TGCATTGG 3' Atxn3 mmu-miR-154 beg:2072 end:2086 pic:3' GCTTCCGTTGTGCCT-ATTGGAT 5'& ||. |.||||| &5' ------------GGGTTGACCTA 3' Atxn3 mmu-miR-154 beg:3286 end:3307 pic:3' GCTTCCGTTGTG-CCTATTGGAT 5'& ||| ||| | ||||||| &5' ----GGCT-CACAGTGTAACCTA 3' Atxn3 mmu-miR-154star beg:1100 end:1122 pic:3' TTATCCAGTTG-GCA-CATACTAA 5'& .||||||. ||| |||||||| &5' ---GGGTCAATACGTGGTATGATT 3' Atxn3 mmu-miR-15a beg:1729 end:1749 pic:3' GTGTTTGGTAATACACGACGAT 5'& .|| ||.| ||||||| &5' TACTC-CCGTA---TGCTGCT- 3' Atxn3 mmu-miR-15a beg:2197 end:2217 pic:3' GTGTTTGGTAATACACGACGAT 5'& ||||| | |||||.| &5' ----AACCAGGAGTTGCTGTT- 3' Atxn3 mmu-miR-15b beg:1734 end:1749 pic:3' ACATTTGGTACTACACGACGAT 5'& ||.| ||||||| &5' ------CCGTA---TGCTGCT- 3' Atxn3 mmu-miR-15b beg:2197 end:2217 pic:3' ACATTTGGTACTACACGACGAT 5'& ||||| || |||||.| &5' ----AACCAGGAGTTGCTGTT- 3' Atxn3 mmu-miR-15bstar beg:1108 end:1123 pic:3' ATCTCGTCGTTTATTACTAAGC 5'& | |. ||||||.| &5' ----GTGGT-----ATGATTTG 3' Atxn3 mmu-miR-17 beg:18 end:42 pic:3' GATGGACGTG--ACATTCGTGAAAC 5'& ||||. ||| ||||| ||.| &5' CTACTCACACTTTGTAA-CATT--- 3' Atxn3 mmu-miR-17star beg:99 end:111 pic:3' GATGTTCACGGGAGTGACGTCA 5'& |||||.||| &5' -------------CACTGTAGT 3' Atxn3 mmu-miR-17star beg:2208 end:2230 pic:3' GATGTTCACGGGAG------TGACGTCA 5'& |||. |. ||||||| &5' -------TGCTGTTTATAGTACTGCAG- 3' Atxn3 mmu-miR-181a beg:1403 end:1421 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& ..||.|| | ||.||||| &5' -----TTGATAG-GATGGATGTT 3' Atxn3 mmu-miR-181a beg:3199 end:3216 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& |.|||.| ||.|||| &5' -------GGCAGTG-TGGATGT- 3' Atxn3 mmu-miR-181a beg:3328 end:3350 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& .||. || | |||||||| &5' ---TACTTTCAAAG-TGAATGTT 3' Atxn3 mmu-miR-181a beg:1313 end:1336 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& ||| || ||. |||.|||| &5' --TCAGGGAAAGTTTTGGATGT- 3' Atxn3 mmu-miR-181b beg:1314 end:1336 pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& .|| || ||. ||.|||| &5' --TCAGGGAAAGTTTTGGATGT- 3' Atxn3 mmu-miR-181b beg:3328 end:3350 pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& .||. || |.|||||||| &5' ---TACTTTCAA-AGTGAATGTT 3' Atxn3 mmu-miR-181c beg:1403 end:1421 pic:3' TGAGTGGCTGTCCAACTTACAA 5'& ..||.||| ||.||||| &5' -----TTGATAGGATGGATGTT 3' Atxn3 mmu-miR-181c beg:3199 end:3216 pic:3' TGAGTGGCTGTCCAACTTACAA 5'& |.||| ||.|||| &5' -------GGCAGTGTGGATGT- 3' Atxn3 mmu-miR-181c beg:3328 end:3350 pic:3' TGAGTGGCTGTCCAACTTACAA 5'& .||. || |||||||| &5' ---TACTTTCAAAGTGAATGTT 3' Atxn3 mmu-miR-181d beg:3328 end:3350 pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& .||. ||| |.|||||||| &5' ---TACTTTCAA-AGTGAATGTT 3' Atxn3 mmu-miR-182 beg:1547 end:1565 pic:3' GCCACACTCAAGATGGTA----ACGGTTT 5'& .|||| |||||| &5' -------------GCCATTTTGTGCCAA- 3' Atxn3 mmu-miR-182 beg:3017 end:3034 pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& ||| |.|.. |||||| &5' -------AGTCATGCTG-TGCCAA- 3' Atxn3 mmu-miR-183 beg:133 end:144 pic:3' TCACTTAAGATGGTCACGGTAT 5'& |||.|||| &5' --------------GTGTCATA 3' Atxn3 mmu-miR-183 beg:3095 end:3113 pic:3' TCACTTAAGATGGT----CACGGTAT 5'& ||| ||||.|| &5' ----------ACCCAAATGTGCTAT- 3' Atxn3 mmu-miR-184 beg:553 end:576 pic:3' TGGGAATAGTCAA--GAGGCAGGT 5'& ||.|| |||| |||.||.| &5' ACTCTG--CAGTCAGCTCTGTTC- 3' Atxn3 mmu-miR-184 beg:596 end:607 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |||.|||. &5' -------------CTCTGTCT- 3' Atxn3 mmu-miR-185 beg:319 end:333 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& | .||||||||. &5' ---------G-TTTTCTCTCT- 3' Atxn3 mmu-miR-185 beg:2834 end:2858 pic:3' AGTCCTTGACG--GAAAGAGAGGT 5'& ||| . ||| ||||.|.||| &5' --AGGCGGTGCTTCTTTTTTTCC- 3' Atxn3 mmu-miR-188-3p beg:504 end:525 pic:3' ACGTTTGG-GACGTACACCCTC 5'& ||.|| .||. |||||| &5' ---AAGCCTTTGTTAGTGGGA- 3' Atxn3 mmu-miR-1892 beg:652 end:674 pic:3' TAGGAGGGAGGGCAGGGGTTTA 5'& ||||.||||.| ||.|||. &5' -TCCTTCCTCTCTTCTCCAG-- 3' Atxn3 mmu-miR-1894-3p beg:650 end:675 pic:3' GAGGGAAGTGGGAGAGGGAA-CG 5'& ||.||||| |.||||.|. || &5' CTTCCTTC-CTCTCTTCTCCAGC 3' Atxn3 mmu-miR-1897-5p beg:654 end:679 pic:3' GGGGGAGA-AAGAGGTAGGTTTC 5'& |..||||| ||||||| | |. &5' CTTCCTCTCTTCTCCAGCTGAG- 3' Atxn3 mmu-miR-1898 beg:2796 end:2809 pic:3' CTAGGGGACACTTGGAACTGGA 5'& |.|||||.|| &5' -----------AGCCTTGGCC- 3' Atxn3 mmu-miR-18a beg:637 end:656 pic:3' GATAGACGTGATCTACGTGGAAT 5'& || || ||.||||| &5' ------GCCCTTCCTGTACCTT- 3' Atxn3 mmu-miR-18astar beg:3072 end:3093 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& |||| || |||||||| &5' ---AAGGC-CAGACAGGGCAGT 3' Atxn3 mmu-miR-1907 beg:1731 end:1750 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& |||| | |||||||| &5' --CTCCCGTA----TGCTGCTC 3' Atxn3 mmu-miR-1907 beg:3175 end:3201 pic:3' TGGAGGTCTAGGA--GACGACGAG 5'& |||||||||||| .|| ||.| &5' ACCTCCAGATCCGACTTGATGTT- 3' Atxn3 mmu-miR-190b beg:390 end:410 pic:3' TTGGGTTATAGTT--TGTATAGT 5'& |||.|| |.||.|| &5' -----AATGTCTTTTATATGTC- 3' Atxn3 mmu-miR-191star beg:2158 end:2176 pic:3' CCCTTGCTTTAGG-TTCACGTCG 5'& | |||| |||||.|| &5' ------GT-ATCCAAAGTGTAG- 3' Atxn3 mmu-miR-191star beg:3366 end:3378 pic:3' CCCTTGCTTTAGGTTCACGTCG 5'& ||||||.|| &5' ------------CAAGTGTAG- 3' Atxn3 mmu-miR-1929 beg:819 end:838 pic:3' GAGACGAGATATTTCAGGATCTT 5'& | |||||||.||| &5' -------CGATTAAGTCCTGGAA 3' Atxn3 mmu-miR-1929 beg:3035 end:3056 pic:3' GAGACGAGATATTTCAGGATCTT 5'& |.| |||| ||.||||| &5' ----GTTAC-TAAATTCTTAGAA 3' Atxn3 mmu-miR-1931 beg:966 end:985 pic:3' CGGTAGCGTGGTCGGGAACGTA 5'& .| . . |||||||| &5' -----TGGGTTGACCCTTGCA- 3' Atxn3 mmu-miR-1935 beg:586 end:607 pic:3' TCTCTAGGCGGTCG---GAGACGGA 5'& ||. ||| |||||.|| &5' -------CGTGAGCGTGCTCTGTCT 3' Atxn3 mmu-miR-193star beg:2422 end:2441 pic:3' AGTAGAACGGG---CGTTTCTGGGT 5'& || |.||.||||| &5' --------CCAAGTGTAAGGACCC- 3' Atxn3 mmu-miR-1940 beg:1442 end:1464 pic:3' TTGACGAGGTGGAAGAGTCA-GGAGGTA 5'& .|.|| ||| ||| |||||| &5' GATTGA---ACC----CAGGGCCTCCA- 3' Atxn3 mmu-miR-1940 beg:644 end:673 pic:3' TTGACGAGGT-GGAA-GAGTCAGGAGGTA 5'& |||. || |||| ||| |.||||| &5' --CTGTACCTTCCTTCCTCTCTTCTCCA- 3' Atxn3 mmu-miR-1941-3p beg:901 end:916 pic:3' TACCCTCTATGACGATTCTAC 5'& .||||||.|||| &5' ---------GCTGCTAGGATG 3' Atxn3 mmu-miR-1943 beg:642 end:667 pic:3' AGGTCCACGGGTCT-AGGAGGGAA 5'& ||| || ||. |||||.||| &5' TCCT-GTACCTTCCTTCCTCTCTT 3' Atxn3 mmu-miR-1946a beg:2528 end:2542 pic:3' TTTTCACACACGGTGGTGACGGGCCGA 5'& |||| |||.||. &5' ----------GCCA-----GCCTGGT- 3' Atxn3 mmu-miR-1948 beg:3053 end:3078 pic:3' GACATGCTCACGAGACGGATTT 5'& ||| | |||| ||||||||. &5' CTGGCCCTGTGCCCTGCCTAAG 3' Atxn3 mmu-miR-1948 beg:587 end:610 pic:3' GACATGCTCACGAGACGGATTT 5'& ||. | ||||||||.||..| &5' --GTGAGCGTGCTCTGTCTGGA 3' Atxn3 mmu-miR-1948 beg:1736 end:1761 pic:3' GACATGCTCACGAG---ACGGATTT 5'& |||.| ||||| ||.|||.| &5' --GTATGC-TGCTCACATGTCTAGA 3' Atxn3 mmu-miR-1949 beg:1096 end:1119 pic:3' TTGATACGACTG---TA-GGACCATATC 5'& |||||. || | ||||||. &5' -----TGCTGGGTCAATACGTGGTATG- 3' Atxn3 mmu-miR-1950 beg:1068 end:1089 pic:3' ACTGGTATAGGAATCTACGTCT 5'& ||| .|||||||| &5' ----CATTAAGCAGGATGCAGA 3' Atxn3 mmu-miR-1950 beg:2718 end:2737 pic:3' ACTGGTATAGGAATCTACGTCT 5'& ||| .|| |. ||||||| &5' -GACAGTA-CT----ATGCAGA 3' Atxn3 mmu-miR-195 beg:1739 end:1749 pic:3' CGGTTATAAAGACACGACGAT 5'& ||||||| &5' -------------TGCTGCT- 3' Atxn3 mmu-miR-1953 beg:1164 end:1185 pic:3' GTCTTCGGACTCT---TGAAAGGGT 5'& ||||| .||||||| &5' ------CCTGATACCTGCTTTCCC- 3' Atxn3 mmu-miR-1953 beg:2271 end:2291 pic:3' GTCTTCGGA-CTC-TTGAAAGGGT 5'& || || ||||||.||| &5' -------CTCGACTAACTTTTCCA 3' Atxn3 mmu-miR-1954 beg:548 end:565 pic:3' TTGTCCCAGAG-TGAGACGTCA 5'& ||| |||||||||| &5' --------CTCTACTCTGCAGT 3' Atxn3 mmu-miR-195 beg:479 end:503 pic:3' CGGTTATAAAG--ACACGACGAT 5'& |.|||.| ||||.|||| &5' -CTAATGTGGTGATGTGTTGCT- 3' Atxn3 mmu-miR-1958 beg:2838 end:2859 pic:3' TGAATGACGAAGGT-GAAAGGAT 5'& . ||||||. .||||||. &5' ----GGTGCTTCTTTTTTTCCTG 3' Atxn3 mmu-miR-1958 beg:1763 end:1781 pic:3' TGAATGACGAAGGTGAAAGGAT 5'& |.|| || .|||||| &5' ----ATTGG--CCCTTTTCCT- 3' Atxn3 mmu-miR-1959 beg:529 end:553 pic:3' GAGG--TGACTCGATGTAGGGG 5'& ||| |.|| |||.|||.||. &5' -TCCTAATTGTGCTGCATTCCT 3' Atxn3 mmu-miR-1959 beg:1482 end:1503 pic:3' GAGGTGACTCGATGTAGGGG 5'& || ||||||||.|||||| &5' --CCTCTGAGCTATATCCCC 3' Atxn3 mmu-miR-1961 beg:370 end:387 pic:3' AAGATTGATGATGGAGT 5'& ||| .|| ||||||. &5' TTCAGAC--CTACCTT- 3' Atxn3 mmu-miR-1968 beg:2554 end:2576 pic:3' TCAGGTGGTAGGAAT--TGTCGACGT 5'& ||| ||| . ||||||| &5' ------CCAGACTTTCTGGAGCTGCA 3' Atxn3 mmu-miR-1968 beg:2665 end:2687 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |.|| ||.| ||.|||||. &5' --TTCAAAATTCAGAATAGCTGT- 3' Atxn3 mmu-miR-196a beg:2995 end:3020 pic:3' GGGTTGTTGT-ACTTTGATGGAT 5'& ||| ||| ||| ||||..|| &5' CCC-ACATGTTTGATACTATTTA 3' Atxn3 mmu-miR-196astar beg:3416 end:3439 pic:3' AGTCCGTCA-AAGAACAACGGCT 5'& ||| |.||| ||.||||||.. &5' TCA-GTAGTATTTTTGTTGTT-- 3' Atxn3 mmu-miR-1971 beg:497 end:516 pic:3' AGAGTCGGG----TCGGAAATG 5'& ||.. |||||||. &5' -----GCTTTTAAAGCCTTTG- 3' Atxn3 mmu-miR-1981 beg:494 end:516 pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& |. | |.||| |||||||. &5' GTTGCTTTTAA----AGCCTTTG- 3' Atxn3 mmu-miR-1983 beg:2757 end:2780 pic:3' TCTTTTGTA---CGAGGTCCACTC 5'& || ||| |. ||||||| &5' -GAT-ACAGTCAGTG-CAGGTGA- 3' Atxn3 mmu-miR-200a beg:2401 end:2422 pic:3' TGTAGCAATGGT-CTG---TCACAAT 5'& .||. ||. ||||||| &5' --------GCCGTGATGCTAGTGTTA 3' Atxn3 mmu-miR-200b beg:3405 end:3430 pic:3' AGTAGTAATGGTC---------CGTCATAAT 5'& ||||| |.|||||| &5' --------ACCAGATTGGATCAGTAGTATT- 3' Atxn3 mmu-miR-200c beg:3407 end:3430 pic:3' AGGTAGTAATG-GGCCGTCATAAT 5'& ||| |||. .| |.|||||| &5' -CCAG-ATTGGATCAGTAGTATT- 3' Atxn3 mmu-miR-200cstar beg:1087 end:1112 pic:3' GGTTTGTGACGACCCA-TTCTGC 5'& |.|. | .|||||||| || ||| &5' CTAGTC-TTGCTGGGTCAATACG 3' Atxn3 mmu-miR-201 beg:1090 end:1105 pic:3' TTCTTGTTACGGAATGACTCAT 5'& |.|||.|||.|| &5' ---------GTCTTGCTGGGT- 3' Atxn3 mmu-miR-202-5p beg:127 end:147 pic:3' TTTCTTCATATACGTATCCTT 5'& |||| |.|.| ||||||| &5' --AGAAATGTGT-CATAGGA- 3' Atxn3 mmu-miR-206 beg:2979 end:3002 pic:3' GGTGTGTGAAGGA-ATGTAAGGT 5'& |||||||.||. ||| ||| &5' CCACACATTTTGAATAC---CCA 3' Atxn3 mmu-miR-206 beg:2174 end:2193 pic:3' GGTGTGTGAAGGAA-TGTAAGGT 5'& | |||. ||||||.| &5' ------AGTTCTATGACATTCTA 3' Atxn3 mmu-miR-208a beg:3105 end:3125 pic:3' TGTTCGAAAAACGAGCAGAATA 5'& ||| | || |||||| &5' ----GCTATCTGAGAGTCTTA- 3' Atxn3 mmu-miR-20astar beg:1074 end:1087 pic:3' GAAATTCACGAGCATTACGTCA 5'& || .|||||| &5' --------GCAG--GATGCAG- 3' Atxn3 mmu-miR-20bstar beg:2210 end:2230 pic:3' GATCTTCACGAGTG---TGACGTCA 5'& ||.|.|. ||||||| &5' -------TGTTTATAGTACTGCAG- 3' Atxn3 mmu-miR-20bstar beg:85 end:111 pic:3' GATCTTCACGAG---TGTGACGTCA 5'& ||||| | ||||||.||| &5' --AGAAGAGATAAAGACACTGTAGT 3' Atxn3 mmu-miR-2135 beg:1443 end:1462 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& |.| ||||.|.|||| &5' ---TTGAACCCAGGGCCTC- 3' Atxn3 mmu-miR-2135 beg:3238 end:3254 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& .||||| ||.|||. &5' ----TGGCCC--AGGCCTT- 3' Atxn3 mmu-miR-2140 beg:327 end:338 pic:3' TGGTGGTTCTAGACGTGGA 5'& ||||||.. &5' ----------TCTGCATT- 3' Atxn3 mmu-miR-2141 beg:193 end:213 pic:3' TTGAAAAGACTGTGGAGGA 5'& ||||||||| |. ||| &5' AACTTTTCTAA-ATGTCC- 3' Atxn3 mmu-miR-2145 beg:2573 end:2590 pic:3' TTGGTCCGGGCTGGGACGA 5'& || |. |||||||. &5' ---CA-GTAAGACCCTGT- 3' Atxn3 mmu-miR-2145 beg:3055 end:3073 pic:3' TTGGTCCGGGC--TGGGACGA 5'& ||||| .|||||| &5' -----GGCCCTGTGCCCTGC- 3' Atxn3 mmu-miR-2146 beg:631 end:651 pic:3' GTGTACCTTGGGAAGAGGTG 5'& .| ||||.|||||| | . &5' -GC-TGGAGCCCTTC-CTGT 3' Atxn3 mmu-miR-218 beg:1965 end:1982 pic:3' TGTACCAATCTA--GTTCGTGTT 5'& ||| ..|||||| &5' --------AGAAACTGAGCACA- 3' Atxn3 mmu-miR-218-1star beg:976 end:994 pic:3' CCACGAACTGCCTTGGTACAAA 5'& |||| | ||.||||||| &5' ----CTTG-C--AATCATGTTT 3' Atxn3 mmu-miR-219 beg:166 end:185 pic:3' TCTTAACGCAAAC-CTGTTAGT 5'& || | |.||.||| &5' ------GCCAAAGAGGCAGTCA 3' Atxn3 mmu-miR-219 beg:2750 end:2770 pic:3' TCTTAAC-GCAAACC-TGTTAGT 5'& | .||||| |||.||| &5' ------GTTGTTTGATACAGTCA 3' Atxn3 mmu-miR-219 beg:969 end:989 pic:3' TCTTAACGCAAACCTGTTAGT 5'& |..||| .|||||| &5' -GGGTTGACCCTT-GCAATCA 3' Atxn3 mmu-miR-21star beg:2199 end:2217 pic:3' CTGTCGGGTAGCT-GACGACAAC 5'& ||| || .||||||| &5' ------CCAG-GAGTTGCTGTT- 3' Atxn3 mmu-miR-222 beg:2191 end:2214 pic:3' TGGGTCATCGGTCTACATCGA 5'& |..|| || |||| || ||| &5' ATTCA-TAACCAGGAGTTGCT 3' Atxn3 mmu-miR-224 beg:1201 end:1222 pic:3' TTGCCTTGGTG----ATCACTGAAT 5'& || |.|||||||. &5' -------CCTTTGAATGGTGACTTG 3' Atxn3 mmu-miR-24 beg:567 end:588 pic:3' GACAAGGACGACTTGACTCGGT 5'& ||||||.||. |||||||| &5' CTGTTCTTGT--AACTGAGC-- 3' Atxn3 mmu-miR-24 beg:1478 end:1496 pic:3' GACAAGGACGACTTGACTCGGT 5'& ||| | ||||||.| &5' -----CCTACCT--CTGAGCTA 3' Atxn3 mmu-miR-24-2star beg:1459 end:1476 pic:3' TGACAAAGTCGAGTCATCCGTG 5'& |||. |||||| &5' -------CAGTGTGCTAGGCA- 3' Atxn3 mmu-miR-26a beg:2852 end:2869 pic:3' TCGGATAGGACCTAATGAACTT 5'& ||||| |||||| &5' ------TCCTGAAA-ACTTGA- 3' Atxn3 mmu-miR-26b beg:2852 end:2869 pic:3' TGGATAGGACTTAATGAACTT 5'& ||||||| |||||| &5' -----TCCTGAAA-ACTTGA- 3' Atxn3 mmu-miR-26bstar beg:3276 end:3288 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& |||||.||| &5' ------------GGAGAGCAG- 3' Atxn3 mmu-miR-27a beg:961 end:971 pic:3' CGCCTTGAATCGGTGACACTT 5'& .||||||. &5' ------------TACTGTGG- 3' Atxn3 mmu-miR-27astar beg:2784 end:2805 pic:3' ACGAGTGTTCGTCGATTCGGGA 5'& |||| |||. .||||||.| &5' TGCTA--AAGTT-TTAAGCCTT 3' Atxn3 mmu-miR-27b beg:961 end:971 pic:3' CGTCTTGAATCGGTGACACTT 5'& .||||||. &5' ------------TACTGTGG- 3' Atxn3 mmu-miR-291a-3p beg:2158 end:2183 pic:3' CGTGTGTTTCAC--CTTCGTGAAA 5'& |.| ||||||| |.||. || &5' GTATCCAAAGTGTAGGAGTTCT-- 3' Atxn3 mmu-miR-291b-3p beg:3489 end:3514 pic:3' TGTTTGTTTTACCT--ACGTGAAA 5'& |.||||| || ||.|.||| &5' --AGACAAATTGATTTTGTATTTT 3' Atxn3 mmu-miR-291b-5p beg:2455 end:2477 pic:3' CCTCTCC-CGGA--GGTGAAACTAG 5'& || ||. . ||||||| &5' -----GGTGCTGTGTTCCTTTGAT- 3' Atxn3 mmu-miR-293star beg:2388 end:2411 pic:3' GTTTTACAGTGTGTCAA-ACTCA 5'& .|||||| |..|||| ||| &5' TAAAATG-CGTACAGCCGTGA-- 3' Atxn3 mmu-miR-295 beg:3313 end:3337 pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& |||| ..|||| ||.||||| &5' AGACATGAAAGGA--AGTACTTT 3' Atxn3 mmu-miR-299 beg:2527 end:2549 pic:3' TTCGCCAAATGG-CAGGGTGTAT 5'& || .|| | |.||||| &5' ----GGCCAGCCTGGTCTACATA 3' Atxn3 mmu-miR-29a beg:2448 end:2465 pic:3' ATTGGCTAAAGTCT--ACCACGAT 5'& |||| |||||||. &5' ----------CAGACATGGTGCTG 3' Atxn3 mmu-miR-29astar beg:413 end:429 pic:3' GACTTGTGGTTTTCTTTAGTCA 5'& ||.|| |.|||||| &5' --------CAGAA-AGATCAGT 3' Atxn3 mmu-miR-29bstar beg:2528 end:2537 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& |..||||| &5' --------------AGGCCAGC 3' Atxn3 mmu-miR-29bstar beg:1912 end:1937 pic:3' ATTTGGTGGTATACTTTG-GTCG 5'& ||||.|| ..|||||||. |||| &5' TAAATCA-TGTATGAAATACAGC 3' Atxn3 mmu-miR-29bstar beg:2975 end:3000 pic:3' ATTTGGTG-GTAT-ACTT-TGGTCG 5'& |||.|||| ||| |||| ||| &5' TAAGCCACACATTTTGAATACC--- 3' Atxn3 mmu-miR-302bstar beg:1667 end:1689 pic:3' TCTTTCGTAAGGGTACAATTTCA 5'& ||| .|||||.||| &5' ----AGCTGTAGGGTGTTAGAGT 3' Atxn3 mmu-miR-302c beg:3316 end:3336 pic:3' GGTGACTTTGTACCTTCGTGAA 5'& || ||||| |||||.|||| &5' -CA-TGAAA---GGAAGTACTT 3' Atxn3 mmu-miR-302cstar beg:3292 end:3316 pic:3' CGTC-CATTGGG-GTACAATTTCG 5'& ||| ||||||. |.| |||.|| &5' -CAGTGTAACCTACGT-TTAGAG- 3' Atxn3 mmu-miR-3072star beg:1171 end:1194 pic:3' GGACGGGA-GGGAGCCCCAGGGA 5'& |||||..| ||||| |||| &5' CCTGCTTTCCCCTCCC--TCCC- 3' Atxn3 mmu-miR-3072star beg:643 end:666 pic:3' GGACG-GGAGGGAGCCCCAGGGA 5'& ||||. |||.|||. ||.|| &5' CCTGTACCTTCCTTCC--TCTCT 3' Atxn3 mmu-miR-30a beg:2199 end:2221 pic:3' GAAGGTCAGCTCCTACAAATGT 5'& |||| | | ||||||.| &5' ---CCAGGAGTTGCTGTTTATA 3' Atxn3 mmu-miR-30astar beg:1341 end:1360 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& .||| .|| ||||||| &5' -TTGCT---GTCTAACTGAAA- 3' Atxn3 mmu-miR-30astar beg:1702 end:1724 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& |.|| .| ||||||. &5' GTTGATTGCTAT--ACTGAAG- 3' Atxn3 mmu-miR-30astar beg:228 end:249 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||| ||.|||.|||||||| &5' --TGC-AATATCTGACTGAAA- 3' Atxn3 mmu-miR-30b beg:1513 end:1532 pic:3' TCGACTCACATCCT-ACAAATGT 5'& |.| || |||||.| &5' ----GGG-GTTTCCTTGTTTGC- 3' Atxn3 mmu-miR-30e beg:2199 end:2221 pic:3' GAAGGTCAGTTCCTACAAATGT 5'& |||| . | ||||||.| &5' ---CCAGGAGTTGCTGTTTATA 3' Atxn3 mmu-miR-30estar beg:226 end:249 pic:3' CGACAT-TTGTAGGCTGACTTTC 5'& |||. ||.|||.|||||||| &5' --TGTGCAATATCTGACTGAAA- 3' Atxn3 mmu-miR-31 beg:1079 end:1101 pic:3' GTCGATACGG-TCG--TAGAACGGA 5'& |||| ||| .||||||. &5' -----ATGCAGAGCTAGTCTTGCT- 3' Atxn3 mmu-miR-322 beg:487 end:503 pic:3' AGGTTTTGTACTTAACGACGAC 5'& .||| ||.|||| &5' --------GTGATGTGTTGCT- 3' Atxn3 mmu-miR-322star beg:977 end:994 pic:3' CACAACGTCGCGAAGTACAAA 5'& ||||| |||||||| &5' ---TTGCAA----TCATGTTT 3' Atxn3 mmu-miR-324-3p beg:2828 end:2845 pic:3' TCGTCGTGGACCCCGTCACC 5'& . ||| |||.||| &5' -----TGTCTGAGGCGGTG- 3' Atxn3 mmu-miR-325star beg:1709 end:1734 pic:3' TGTGA-ATGAC-TCGTGGA-TGATCC 5'& .|| ||||| ||.|. | |||| &5' --GCTATACTGAAGTATGTAACTA-- 3' Atxn3 mmu-miR-330 beg:3233 end:3257 pic:3' CGGATT-CTGTGTCCGGGTCTCT 5'& ||||. |.| ||||||. |.| &5' -CCTAGTGGCCCAGGCCTTGGG- 3' Atxn3 mmu-miR-330star beg:325 end:352 pic:3' AGAGACGT--CCGGGACACGAAACG 5'& |||||||| || || |||| || &5' TCTCTGCATTGGGGGTG-GCTTGGC 3' Atxn3 mmu-miR-330star beg:2912 end:2929 pic:3' AGAGACGTCCGGGACACGAAACG 5'& |.| |.| |||||||. &5' -----GTA-GTC---TGCTTTGT 3' Atxn3 mmu-miR-335-3p beg:2114 end:2137 pic:3' CCAGTCCTC-GTTATTACTTTTT 5'& | || || ||.| |||||||. &5' --TGAGTAGCCAGT-ATGAAAAG 3' Atxn3 mmu-miR-335-3p beg:174 end:198 pic:3' CCAGTCC-TC-GTTATTACTTTTT 5'& ||| || ||. |||||||.| &5' ----AGGCAGTCAGCAATGAAAGA 3' Atxn3 mmu-miR-339-5p beg:2221 end:2240 pic:3' GCACTCGAGGACCTC-CTGTCCCT 5'& || | ||| ||||||| &5' ------CTGCAGGACAGACAGGG- 3' Atxn3 mmu-miR-339-5p beg:3069 end:3089 pic:3' GCACTCGAGGA--CCTC-CTGTCCCT 5'& ||| || ||||||| &5' --------CCTAAGGCCAGACAGGG- 3' Atxn3 mmu-miR-345-3p beg:3242 end:3262 pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& ||||.||. .|||||| &5' ----CCAGGCCTTGGGTTCAG- 3' Atxn3 mmu-miR-346 beg:2718 end:2739 pic:3' TCTCCGTCCGTGAGCCCGTCTGT 5'& | || |.||| ||||||| &5' ---GACA-GTACTAT-GCAGACA 3' Atxn3 mmu-miR-3470a beg:2529 end:2551 pic:3' GGTCGGACCAGATGTTTCACT 5'& ||||||||||||||| ||| &5' CCAGCCTGGTCTACATAGT-- 3' Atxn3 mmu-miR-3470a beg:2150 end:2173 pic:3' GGTCGGAC-CAGATGTTTCACT 5'& |.|||| || ||||||| &5' CTAGCCACAGTATCCAAAGTG- 3' Atxn3 mmu-miR-3470b beg:2529 end:2551 pic:3' GGTCGGACCAGATGTCTCACT 5'& ||||||||||||||| ||| &5' CCAGCCTGGTCTACATAGT-- 3' Atxn3 mmu-miR-3473 beg:314 end:333 pic:3' CCGACTCGGTAGAGAGGT 5'& |.| |. ||||||. &5' -GTTTCGTTTTCTCTCT- 3' Atxn3 mmu-miR-3473 beg:1485 end:1504 pic:3' CCGACTCGGTAGAGAGGT 5'& ||||||.|| || ||| &5' --CTGAGCTATATCCCCA 3' Atxn3 mmu-miR-3475 beg:1443 end:1465 pic:3' AAGTTTGGTACACGGAGGTCT 5'& | |||| |||||||| &5' -TTGAACCCAGGGCCTCCAG- 3' Atxn3 mmu-miR-34a beg:2237 end:2260 pic:3' TGTTGGTCGATTCT----GTGACGGT 5'& .|| |.|. |||||||| &5' ------GGCAAGGGACTCCACTGCCA 3' Atxn3 mmu-miR-34c beg:2237 end:2259 pic:3' CGTTAGTCGA---TTGATGTGACGGA 5'& .|| .||| ||||||| &5' ------GGCAAGGGACTCCACTGCC- 3' Atxn3 mmu-miR-351 beg:1306 end:1323 pic:3' GTCCGAGTTTCCCGAGG--AGTCCCT 5'& |.|. ||||||| &5' ------------GTTTTTATCAGGGA 3' Atxn3 mmu-miR-361 beg:1049 end:1070 pic:3' CATGGGGACCTCTAAGACTATT 5'& | .||| .||.|||||| &5' --AGTCCTTA--GTTTTGATAA 3' Atxn3 mmu-miR-361 beg:2462 end:2484 pic:3' CATGGGGACCTCTAAGACTATT 5'& ||. ||| ||| |||.|| &5' GTGTTCCTTT-GATGCTGGTA- 3' Atxn3 mmu-miR-367 beg:214 end:237 pic:3' AGTGGTAACGATTT-----CACGTTAA 5'& |||.| ||||||| &5' ------TTGTTTTTCAAATGTGCAAT- 3' Atxn3 mmu-miR-374star beg:1922 end:1937 pic:3' GAGCCTGTTACTATTATGTTGG 5'& |||| ||||||.| &5' --------ATGA-AATACAGC- 3' Atxn3 mmu-miR-374star beg:2386 end:2407 pic:3' GAGCCTGTTACTATTATGTTGG 5'& ||.|| .||||.|| &5' ----GATAAAATGCGTACAGCC 3' Atxn3 mmu-miR-376astar beg:2476 end:2500 pic:3' TGAGTATCT-TCCTC-TTAGATGG 5'& .|| .|| ||||| |||||.| &5' GCTGGTACTTAGGAGAAATCTGC- 3' Atxn3 mmu-miR-376astar beg:2903 end:2925 pic:3' TGAGTATCTTCCTC-TTAGATGG 5'& |||| |||||| |.|||.|. &5' -CTCA---AAGGAGTAGTCTGCT 3' Atxn3 mmu-miR-376b beg:1406 end:1430 pic:3' TTC-ACCTACAAGGAGATACTA 5'& |.| ||||||||. .| ||.| &5' AGGATGGATGTTTGGTT-TGGT 3' Atxn3 mmu-miR-377 beg:37 end:53 pic:3' TGTTTTCAACGGAAACACACTA 5'& |||.| |||||||| &5' -------TTGTC--TGTGTGAT 3' Atxn3 mmu-miR-378star beg:1675 end:1694 pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& .|| ||||.|||| &5' ----GGGTGTTAGAGTTAGGA- 3' Atxn3 mmu-miR-380-3p beg:701 end:721 pic:3' TTCTACACCTGGTATGATGTAT 5'& |||| || ||||.|| &5' -AGATTT---CCTT-CTACGTA 3' Atxn3 mmu-miR-380-3p beg:2532 end:2549 pic:3' TTCTACACCTGGTAT-GATGTAT 5'& .|| ||||||| &5' ---------GCCTGGTCTACATA 3' Atxn3 mmu-miR-381 beg:3490 end:3511 pic:3' TGTCTCTCG--AACGGGAACATAT 5'& |||| ||| ..|||||| &5' ---GAGACAAATTGATTTTGTAT- 3' Atxn3 mmu-miR-382 beg:2797 end:2818 pic:3' GCTTAGGTGGTGCTTGTTGAAG 5'& | |. .||| ||.||||| &5' -GCCTTGGCCA--AATAACTT- 3' Atxn3 mmu-miR-384-3p beg:3114 end:3134 pic:3' TAACACTT-GTTAAAGATCCTTA 5'& ||. | ||||||| &5' -----GAGTCTTAAGCTAGGAA- 3' Atxn3 mmu-miR-384-3p beg:1243 end:1265 pic:3' TAACACTTGTTAAAGATCCTTA 5'& ||||| |.| .|||||| &5' ATTGT-AGCCAGC-TTAGGAA- 3' Atxn3 mmu-miR-384-5p beg:1690 end:1714 pic:3' TGTAACGGATCCTTAACAAATGT 5'& || ||||.|| |.||| ||.| &5' ACTTTGCTTAC-AGTTGATTGC- 3' Atxn3 mmu-miR-384-5p beg:2199 end:2221 pic:3' TGTAACGGATCCTTA---ACAAATGT 5'& || ||||.| ||||||.| &5' ------CC-AGGAGTTGCTGTTTATA 3' Atxn3 mmu-miR-384-5p beg:3463 end:3485 pic:3' TGTAACGGATCCTTAACAAATGT 5'& ||| |||| |||||||.| &5' -CATC-CCTAAT--TTGTTTATA 3' Atxn3 mmu-miR-409-3p beg:25 end:42 pic:3' TCCCCAAGTGGCTCGTTGTAAG 5'& |||. |.|||||| &5' -------CACTTTGTAACATT- 3' Atxn3 mmu-miR-429 beg:3415 end:3430 pic:3' TGCCGTAATGGTCTGTCATAAT 5'& || |.||| .|||||| &5' --GG----ATCAG-TAGTATT- 3' Atxn3 mmu-miR-431 beg:2211 end:2234 pic:3' ACGTACTGCCGGACGTTCTGT 5'& |. | |||||.|||| &5' -GTTTATAGTACTGCAGGACA 3' Atxn3 mmu-miR-432 beg:1221 end:1242 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& ||. |.| | ||||||| &5' -----CATAGGTAAAGTCCAAGA 3' Atxn3 mmu-miR-449a beg:2237 end:2260 pic:3' TGGTCGA---TTGTTATGTGACGGT 5'& .|| .|| |||||||| &5' ---GGCAAGGGACTC--CACTGCCA 3' Atxn3 mmu-miR-449b beg:2237 end:2259 pic:3' CGGTCGA---TTGTTGTGACGGA 5'& .|| .|| ||||||| &5' ---GGCAAGGGACTCCACTGCC- 3' Atxn3 mmu-miR-449c beg:2237 end:2259 pic:3' GGTCGATCGTTAC-GTGACGGA 5'& .|| || .| ||||||| &5' --GGCAAGGGACTCCACTGCC- 3' Atxn3 mmu-miR-450a-3p beg:1489 end:1504 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& || .|||||||. &5' ------GCTA--TATCCCCAG- 3' Atxn3 mmu-miR-450b-3p beg:2894 end:2911 pic:3' TACGTACGTTTTACAAGGGTTA 5'& ||||| |||.||| &5' --GCATGAA-----TTCTCAA- 3' Atxn3 mmu-miR-450b-5p beg:1634 end:1653 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||||| |.||||||. &5' --TTCAGTA----ATTGCAAAG 3' Atxn3 mmu-miR-450b-5p beg:1075 end:1087 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||||| ||||.| &5' ----CAGGA------TGCAGA- 3' Atxn3 mmu-miR-450b-5p beg:3255 end:3279 pic:3' ATAAGTCCTTGTA--TGACGTTTT 5'& .||||| | ||||||||| &5' -GTTCAGTCTCTAACACTGCAAAA 3' Atxn3 mmu-miR-452 beg:2720 end:2739 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& |||| || ||||.||| &5' ----CAGTA--CTATGCAGACA 3' Atxn3 mmu-miR-455 beg:3205 end:3231 pic:3' CACATATACGGG-CACCTGA-CG 5'& ||| ||.|||.| |||| || &5' GTGGATGTGCTCAGTGGTAGAGC 3' Atxn3 mmu-miR-466f-5p beg:1291 end:1309 pic:3' GTACGTGTACGTG-TGTGTGCAT 5'& | ..||| | .||||||| &5' ---GTGTGTGCTCTGCACACGT- 3' Atxn3 mmu-miR-466f-5p beg:1735 end:1756 pic:3' GTACGTGTACG-TGTGTGTGCAT 5'& |..|||| .| ||||.|| &5' ----CGTATGCTGCTCACATGT- 3' Atxn3 mmu-miR-466g beg:30 end:50 pic:3' ACACACACGTACACAGACATA 5'& ||| ||| |||||||.| &5' --TGTAA-CAT-TGTCTGTGT 3' Atxn3 mmu-miR-467b beg:435 end:456 pic:3' GTATATGTAC-GTCCGTGAATG 5'& |||| |.||| |.||||| &5' CATACATATGTCGGGCAC---- 3' Atxn3 mmu-miR-467e beg:1735 end:1754 pic:3' TGTATATGTACGAGTGTGAATA 5'& |.|||.| ||||||||. &5' -CGTATGC-TGCTCACAT---- 3' Atxn3 mmu-miR-469 beg:670 end:692 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& .| ||| .|.|||||| &5' ----GCTGAGAAAA---GAGGAGGCA 3' Atxn3 mmu-miR-470 beg:1221 end:1243 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& ||. .|| |||||||||| &5' ---CATAGGTAA-AGTCCAAGAA 3' Atxn3 mmu-miR-470star beg:2467 end:2483 pic:3' AGAAGAGTCTTTCCATGACCAA 5'& ||. || |.||||| &5' ----CTTTGA----TGCTGGT- 3' Atxn3 mmu-miR-483 beg:654 end:676 pic:3' GAGGGAAGAGAAGAGGGCAGAA 5'& ||.|| |||||||||| || &5' CTTCC-TCTCTTCTCCAG-CT- 3' Atxn3 mmu-miR-486 beg:2156 end:2178 pic:3' GAGCCCCGTCG-AG---TCATGTCCT 5'& |||. || |||..|||| &5' -------CAGTATCCAAAGTGTAGGA 3' Atxn3 mmu-miR-488 beg:3321 end:3340 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& |||.|| ||||||| &5' ----AAGGAAGTA-CTTTCAA 3' Atxn3 mmu-miR-488 beg:374 end:404 pic:3' CTGGTT--------CTTTGTCGGAAAGTT 5'& |||| ||||. |.||||.| &5' GACCTACCTTTTATGAAAT-GTCTTTTA- 3' Atxn3 mmu-miR-497 beg:1727 end:1749 pic:3' ATGTTTGGTGT---CACACGACGAC 5'& |||.|| || ||||||| &5' ----AACTACTCCCGTATGCTGCT- 3' Atxn3 mmu-miR-497 beg:491 end:503 pic:3' ATGTTTGGTGTCACACGACGAC 5'& ||||.|||| &5' ------------TGTGTTGCT- 3' Atxn3 mmu-miR-499 beg:2781 end:2800 pic:3' TTTGTAGTGACGTTCAGAATT 5'& ||| .|| ||||.|||| &5' ---CAT-GCTA-AAGTTTTAA 3' Atxn3 mmu-miR-499 beg:3105 end:3126 pic:3' TTTGTAGTGACGTTCAGAATT 5'& .| ||| |||||||| &5' --GCTAT-CTGAGAGTCTTAA 3' Atxn3 mmu-miR-500 beg:1279 end:1296 pic:3' ACTTGGGAACGGGT---CCACGTAA 5'& |||.| ||||..| &5' --------TGCTCTACTGGTGTGT- 3' Atxn3 mmu-miR-501-5p beg:1014 end:1035 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& |||| || .|||||.| &5' --TCACAAAGCT-TAAAGGGT- 3' Atxn3 mmu-miR-503star beg:3197 end:3220 pic:3' GGTCCGTCAC-CTTTGTTATGAG 5'& .|||||||| |.| .|.||| &5' -TAGGCAGTGTGGAT--GTGCTC 3' Atxn3 mmu-miR-505 beg:242 end:268 pic:3' TCTTTTG-GTCGTTC--ACAACTGC 5'& |||| ..| |||||.| &5' -GAAATTATGGAATTTTTGTTGGC- 3' Atxn3 mmu-miR-505 beg:3154 end:3177 pic:3' TCTTTT-GGTCGTTCACAACTGC 5'& |||.. .|||. |||||||| &5' AGAGGTTTCAGTTAGTGTTGA-- 3' Atxn3 mmu-miR-511 beg:109 end:131 pic:3' ACTCACGTCTCGTT-TTCCGTA 5'& | ||.| ||||. |||||| &5' -GTTTGTA-AGCAGAAAGGCA- 3' Atxn3 mmu-miR-511 beg:673 end:692 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| |||| .||||| &5' -GAGAAAAGAG---GAGGCA- 3' Atxn3 mmu-miR-540-3p beg:1439 end:1461 pic:3' GGTCCTAGC-TGGAGACTGGA 5'& .||||.| ||| |.||| &5' --GGGATTGAACCCAGGGCCT 3' Atxn3 mmu-miR-540-5p beg:2433 end:2443 pic:3' TGTCTCAGTCTCCCACTGGGAAC 5'& ||||||| &5' ---------------GACCCTT- 3' Atxn3 mmu-miR-542-3p beg:394 end:418 pic:3' AAAGTCAATAGTTAG-ACAGTGT 5'& || |||| .|| |||.||| &5' --TCTTTTATATGTCTTGTTACA 3' Atxn3 mmu-miR-544 beg:2211 end:2232 pic:3' CTCGAACGATTTTTACGTCTTA 5'& |.|| ||. |||||.| &5' --GTTTA-TAGTACTGCAGGA- 3' Atxn3 mmu-miR-544 beg:1074 end:1090 pic:3' CTCGAACGATTTTTACGTCTTA 5'& || |..|||||||. &5' ------GC--AGGATGCAGAG- 3' Atxn3 mmu-miR-546 beg:2244 end:2261 pic:3' CTGAGGC-ACGGTGGTA 5'& |||||| |||||| &5' GACTCCACTGCCAC--- 3' Atxn3 mmu-miR-599 beg:685 end:702 pic:3' CAAACTATTTGACTGTGTT 5'& | |.| ||||||| &5' ----GGCAGAG-GACACAA 3' Atxn3 mmu-miR-615-5p beg:2422 end:2443 pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& || || . ||||||.. &5' ---CCAAGTGTAA-GGACCCTT 3' Atxn3 mmu-miR-615-5p beg:2236 end:2253 pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& |.||| |||||.|| &5' -----GGGCAA--GGGACTCC- 3' Atxn3 mmu-miR-654-3p beg:2718 end:2740 pic:3' TTCCACTACCAGT---CGTCTGTAT 5'& || || |||||||| &5' -----GACAGTACTATGCAGACAT- 3' Atxn3 mmu-miR-654-5p beg:2286 end:2306 pic:3' TGTGTACAAGACGTCGAATGGT 5'& ||. ||||.| .|||||| &5' -CATTTGTTTT----TTTACCA 3' Atxn3 mmu-miR-665 beg:453 end:472 pic:3' TC-CCTGGAGTCGGAGGACCA 5'& | |||. ||.||||||| &5' -GTGGAT----GCTTCCTGGT 3' Atxn3 mmu-miR-666-3p beg:551 end:566 pic:3' TCGTCCGCTAGTGCGACGTCGG 5'& .|| ||||||.| &5' ----------TACTCTGCAGTC 3' Atxn3 mmu-miR-666-5p beg:831 end:852 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& || |.|| ||||.||| &5' GGAAA--ATAGA--TGCCTGCT 3' Atxn3 mmu-miR-669g beg:2755 end:2775 pic:3' TAGTACAGTTGTGTATGTTACGT 5'& | |.||| ||.|||| &5' ------TTGATACAGTCAGTGCA 3' Atxn3 mmu-miR-669g beg:3077 end:3095 pic:3' TAGTACAGTTGTGTA-TGTTACGT 5'& ||. ||| .||.||| &5' -------CAG-ACAGGGCAGTGC- 3' Atxn3 mmu-miR-670 beg:1300 end:1323 pic:3' AAGTG-GTGTATGTG-AGTCCCTA 5'& .| |||.| ||||||| &5' ---GCACACGTTTTTATCAGGGA- 3' Atxn3 mmu-miR-672 beg:2567 end:2594 pic:3' AGTG-TGTGTCATG-TGGTT-GGAGT 5'& .| .||||||| ||| .||.| &5' --GCTGCACAGTAAGACCCTGTCTTA 3' Atxn3 mmu-miR-673-3p beg:290 end:312 pic:3' CCAC-GTGTCTTGAGTCGGGGCCT 5'& || |||||||||. .||. &5' --TGCCACAGAACTTGATCCT--- 3' Atxn3 mmu-miR-673-3p beg:751 end:769 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& || | .||||.||.|| &5' ---GC-CC---TTCAGTCCTGG- 3' Atxn3 mmu-miR-673-3p beg:817 end:837 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| || ||.||.||| &5' ----CAC-GATTA-AGTCCTGGA 3' Atxn3 mmu-miR-674 beg:3214 end:3224 pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& ||||||| &5' --------------CTCAGTG- 3' Atxn3 mmu-miR-676star beg:3358 end:3380 pic:3' CGTTCAGGATTCCA-ACATCTCA 5'& |||||||| ||||||| &5' ---AGTCCTAACAAGTGTAGAG- 3' Atxn3 mmu-miR-677 beg:1972 end:1989 pic:3' AGTCTTCGATTAGTAGTGACTT 5'& .||| || ||||||| &5' ----GAGCA---CA-CACTGAA 3' Atxn3 mmu-miR-677 beg:1705 end:1723 pic:3' AGTCTT-CGATTAGTAGTGACTT 5'& || |||| .|||||| &5' ---GATTGCTA-----TACTGAA 3' Atxn3 mmu-miR-677 beg:2730 end:2748 pic:3' AGTCTTCGATTAGTAGTGACTT 5'& |||| ||||||| &5' -CAGACATT-----TCACTGA- 3' Atxn3 mmu-miR-678 beg:1632 end:1657 pic:3' GGAGGTCAGGAACGTGGCTCTG 5'& |.|.|||| ||||| |. | &5' CTTTCAGTAATTGCAAAGGTTC 3' Atxn3 mmu-miR-680 beg:2121 end:2142 pic:3' GGGGGTACAGTCG--TCTACGGG 5'& ||| || ||||||| &5' ---CCA-GTATGAAAAGATGCC- 3' Atxn3 mmu-miR-680 beg:596 end:615 pic:3' GGGGGTACAGTCGTCTACGGG 5'& |.| |||| .||||||| &5' --CTC-TGTCT--GGATGCCC 3' Atxn3 mmu-miR-681 beg:2824 end:2847 pic:3' TC-GACGGACGGTCGCTCCGAC 5'& || |||.||| .|||. ||| &5' AGACTGTCTGA-GGCGGTGCT- 3' Atxn3 mmu-miR-682 beg:3256 end:3276 pic:3' GTCTGAAG-TGACACTGACGTC 5'& ||| || || |||||| &5' CAGTCTCTAAC----ACTGCA- 3' Atxn3 mmu-miR-684 beg:3267 end:3286 pic:3' AACTGAACTTC-CCTTTTGA 5'& ||| |||.|.| &5' ---ACTGCAAAAGGAGAGC- 3' Atxn3 mmu-miR-686 beg:680 end:693 pic:3' AGAAGTGGCAGAC-CCTTCGTTA 5'& | |||.|||. &5' ------------GAGGAGGCAG- 3' Atxn3 mmu-miR-687 beg:901 end:916 pic:3' AGTAACGACGTAAGGTCCTATC 5'& ||||| .|||||. &5' -----GCTGC----TAGGATG- 3' Atxn3 mmu-miR-690 beg:1077 end:1098 pic:3' AAACCAACA-CTCGGATCGGAAA 5'& || || ||| ||||.||| &5' ---GGATGCAGAG-CTAGTCTT- 3' Atxn3 mmu-miR-692 beg:1951 end:1971 pic:3' CTCACTCCGC-GAGTTTCTCTA 5'& || .| .|.||||||| &5' ----GAAATGTTTTAAAGAGA- 3' Atxn3 mmu-miR-696 beg:2968 end:2988 pic:3' GGGTGTCG--TTC-GTGTGCG 5'& .|| ||. ||| ||||| &5' -TCAGAGTCTAAGCCACAC-- 3' Atxn3 mmu-miR-697 beg:1400 end:1421 pic:3' AGAGGTGTCCTGGTCCTACAA 5'& |||. |.||||. ||||||| &5' TCTTGATAGGAT--GGATGTT 3' Atxn3 mmu-miR-702 beg:758 end:777 pic:3' CTCGCC-CCATTTCCCACCCGT 5'& ||. ||| ||||||. &5' -AGTCCTGGT----GGTGGGT- 3' Atxn3 mmu-miR-704 beg:2997 end:3009 pic:3' GATCCTCGTCTCGTGTACAGA 5'& |||||||.| &5' ------------CACATGTTT 3' Atxn3 mmu-miR-705 beg:1470 end:1494 pic:3' ACGG--GTGGGGTGGAGGGTGG 5'& || |.|||.|||||. | | &5' -GCAAGCGCCCTACCTCTGAGC 3' Atxn3 mmu-miR-709 beg:650 end:672 pic:3' AGGAGGACGGAGAC-GGAGG 5'& |.|||| ||||| .|||| &5' -CTTCCTTCCTCTCTTCTCC 3' Atxn3 mmu-miR-713 beg:41 end:62 pic:3' CGACACACGGAAGTCACGT 5'& ||||||| |||||.| &5' -CTGTGTGATTACAGTGTA 3' Atxn3 mmu-miR-713 beg:2458 end:2479 pic:3' CGACACACGGAAGTCACGT 5'& ||||||| ||||. ||| &5' GCTGTGTTCCTTTGATGC- 3' Atxn3 mmu-miR-713 beg:2753 end:2775 pic:3' CGACACACGGA---AGTCACGT 5'& .||| || |||||||| &5' -TTGTTTGATACAGTCAGTGCA 3' Atxn3 mmu-miR-717 beg:587 end:609 pic:3' TCTCTTCCATAGAGACAGACTC 5'& | ||. ||. |||||||||. &5' -GTGAGCGTG-CTCTGTCTGG- 3' Atxn3 mmu-miR-720 beg:604 end:620 pic:3' ACCTCCGGGGTCGCTCTA 5'& ||| ||||. |||| &5' -GGATGCCCT---GAGA- 3' Atxn3 mmu-miR-743a beg:1132 end:1148 pic:3' AGATGAGTCGAACCACAGAAAG 5'& |||| |||||||| &5' ---ACTCT-----GTGTCTTT- 3' Atxn3 mmu-miR-743a beg:205 end:226 pic:3' AGATGAGTCGAACCACAGAAAG 5'& |. | |.|| |||.|||| &5' --TGTCCCGTTT--TGTTTTTC 3' Atxn3 mmu-miR-743a beg:3417 end:3443 pic:3' AGATGAGTCG-------AACCACAGAAAG 5'& ||||. ||| |||.|||| &5' -----TCAGTAGTATTTTTGTTGTTTTTC 3' Atxn3 mmu-miR-743b-3p beg:1527 end:1547 pic:3' AGATAAGTCGT---ACTACAGAAAG 5'& || || |||.|||| &5' --------GCTTTTTGTTGTTTTTC 3' Atxn3 mmu-miR-743b-3p beg:3423 end:3443 pic:3' AGATAAGTCGTACTACAGAAAG 5'& ||||. || |||.|||| &5' --TATTTT---TGTTGTTTTTC 3' Atxn3 mmu-miR-743b-3p beg:385 end:403 pic:3' AGATAAGTCGTACT--ACAGAAAG 5'& .|||| |||||||. &5' ---------TATGAAATGTCTTTT 3' Atxn3 mmu-miR-743b-5p beg:1474 end:1494 pic:3' ACTACCTGTGGTC---AGACTTGT 5'& .|.|| |||||.| &5' ------GCGCCCTACCTCTGAGC- 3' Atxn3 mmu-miR-744 beg:3054 end:3073 pic:3' ACGACAATCGGGAT-CGGGGCGT 5'& |.|||||. ||||.|| &5' ------TGGCCCTGTGCCCTGC- 3' Atxn3 mmu-miR-744star beg:1257 end:1274 pic:3' TCCAACTCCAATCACCGTTGTC 5'& ||| .| ||||.|| &5' ------AGGAAGG-GGCAGCA- 3' Atxn3 mmu-miR-758 beg:2258 end:2274 pic:3' ATCACCTGGTCCAGTGTTT 5'& |.|. |||||||.| &5' -----GGCT-GGTCACAGA 3' Atxn3 mmu-miR-760 beg:289 end:311 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& |. ||||||| |. || || &5' TTGCCACAGAACTTGATCC- 3' Atxn3 mmu-miR-760 beg:1495 end:1512 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& .||| ||||.||||| &5' -TCCC-CAGATCCAGA---- 3' Atxn3 mmu-miR-760 beg:1074 end:1092 pic:3' AGGGGTGT-CTGGGTCTCGGC 5'& .|| ||. ||||||. &5' -----GCAGGATGCAGAGCT- 3' Atxn3 mmu-miR-760 beg:1436 end:1460 pic:3' AGGGGTGTCT-----GGGTCTCGGC 5'& | | .|| |||||.||| &5' ---CGAGGGATTGAACCCAGGGCC- 3' Atxn3 mmu-miR-764-5p beg:1964 end:1981 pic:3' TCCTCCTGTACACTCGTGG 5'& ||| ||||||| &5' --GAGAAAC--TGAGCAC- 3' Atxn3 mmu-miR-764-5p beg:2891 end:2901 pic:3' TCCTCCTGTACACTCGTGG 5'& ||||||. &5' -----------TGAGCAT- 3' Atxn3 mmu-miR-767 beg:2521 end:2542 pic:3' ACGAG-TCT-GTTGGTACCACGT 5'& |.|| ||. ||.|| |||| &5' -GTTCAAGGCCAGCC-TGGT--- 3' Atxn3 mmu-miR-7a beg:417 end:438 pic:3' TGTTGTTTTAGTGAT-CAGAAGGT 5'& ||.|||| | ||||||. &5' -----AAGATCAGTCTGTCTTCT- 3' Atxn3 mmu-miR-7a beg:1616 end:1637 pic:3' TGTTGTTTTAG-TGA-TCAGAAGGT 5'& .|||||| |. |||.|||. &5' ----TAAAATCTATGAAGTTTTCT- 3' Atxn3 mmu-miR-7b beg:417 end:438 pic:3' TGTTGTTTTAGTGTT-CAGAAGGT 5'& ||.|||| ||||||. &5' -----AAGATCAGTCTGTCTTCT- 3' Atxn3 mmu-miR-7b beg:1616 end:1637 pic:3' TGTTGTTTTAGTG--TTCAGAAGGT 5'& .|||||| ||||.|||. &5' ----TAAAATCTATGAAGTTTTCT- 3' Atxn3 mmu-miR-804 beg:2798 end:2821 pic:3' AGGT-CCACTCCTTGTTGAGTGT 5'& || || ||.||||.||| &5' -CCTTGGCCA--AATAACTTACA 3' Atxn3 mmu-miR-804 beg:736 end:756 pic:3' AGGTCCACTCCTTGTTGAGTGT 5'& ||| ||||. |||||.| &5' -CCAC---AGGAGAAACTCGC- 3' Atxn3 mmu-miR-804 beg:3279 end:3297 pic:3' AGGTCCACTCCTTGTTGAGTGT 5'& ||| |. .|||||| &5' -------GAGCAGTGGCTCACA 3' Atxn3 mmu-miR-872 beg:3286 end:3306 pic:3' GGACTTGATTGTT-CATTGGAA 5'& ..|| |||. ||||||| &5' ----GGCTCACAGTGTAACCT- 3' Atxn3 mmu-miR-872 beg:3374 end:3397 pic:3' GGACTTGA--TTGTTCATTGGAA 5'& ||.|| .|.| ||.||||| &5' ---GAGCTATGATATGTGACCTT 3' Atxn3 mmu-miR-876-3p beg:2332 end:2352 pic:3' ACTTAATGAAACATTTGGTGAT 5'& |||| |||| ||||.|||. &5' TGAA-TACT----AAACTACTG 3' Atxn3 mmu-miR-876-3p beg:2613 end:2631 pic:3' ACTTAATGAAACA--TTTGGTGAT 5'& ||||| |.|.|||| &5' -------CTTTGGAAAGATCACT- 3' Atxn3 mmu-miR-876-5p beg:2476 end:2498 pic:3' ATCACTAAGTG-TCTCTTTAGGT 5'& ||.| | .||||||||. &5' ---TGGTACTTAGGAGAAATCT- 3' Atxn3 mmu-miR-877 beg:535 end:557 pic:3' GGGACGCGGTA-GAGGAGATG 5'& .||.||. .|||||||| &5' --TTGTGCTGCATTCCTCTAC 3' Atxn3 mmu-miR-877 beg:1764 end:1785 pic:3' GGGACGCGGT-AGAGGAGATG 5'& .|| ||| |.||||.||| &5' --TTG-GCCCTTTTCCTTTAC 3' Atxn3 mmu-miR-878-3p beg:1133 end:1154 pic:3' AGATGGGTCACACC-ACAGTACG 5'& ||.| |||| ||||||| &5' ---ACTCTGTGTCTTTGTCATG- 3' Atxn3 mmu-miR-878-3p beg:2633 end:2653 pic:3' AGATGGGTCACACC-ACAGTACG 5'& ||... || || ||||||| &5' --TATTT--TG-GGATGTCATG- 3' Atxn3 mmu-miR-878-3p beg:2957 end:2983 pic:3' AGATGGGTCACAC-CACAGTA-CG 5'& |.||..| |||| | ||| || &5' TTTATTC-GTGTCAGAGTCTAAGC 3' Atxn3 mmu-miR-878-5p beg:1750 end:1771 pic:3' ACAGAACTGTAGGTTGATCTAT 5'& ||||| |||||.| |.|.| &5' TGTCTAGACATTC-ATTGG--- 3' Atxn3 mmu-miR-879 beg:2784 end:2805 pic:3' CCGAATCTCGATATTCGGAGA 5'& ||| ||.| |||||||. &5' -GCTAA-AGTTTTAAGCCTT- 3' Atxn3 mmu-miR-879 beg:497 end:515 pic:3' CCGAATCTCGATA--TTCGGAGA 5'& ||| ||||||.| &5' --------GCTTTTAAAGCCTTT 3' Atxn3 mmu-miR-881 beg:2560 end:2580 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& ||| |.|. .|||||| &5' ----TTCTGGAGCTGCACAGT- 3' Atxn3 mmu-miR-881 beg:2757 end:2768 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& ||.||||| &5' -------------GATACAGT- 3' Atxn3 mmu-miR-881star beg:312 end:334 pic:3' TCTACACTGACAATAGAGAGAC 5'& |||| | ||| |||||||| &5' --ATGTTTC-GTTTTCTCTCTG 3' Atxn3 mmu-miR-883a-3p beg:3217 end:3236 pic:3' TATGACTCTCGACAA--CGTCAAT 5'& ||. || ||||||| &5' --------AGTGGTAGAGCAGTTA 3' Atxn3 mmu-miR-883b-3p beg:3214 end:3236 pic:3' TATGACTCTCTACAACGTCAAT 5'& |.|| || |.| ||||||| &5' -TGCTCAGTGGTAGAGCAGTTA 3' Atxn3 mmu-miR-9 beg:158 end:177 pic:3' AGTATGTCGATCTAT---TGGTTTCT 5'& ||||| .||||||| &5' ----------AGATACTAGCCAAAGA 3' Atxn3 mmu-miR-9 beg:2871 end:2890 pic:3' AGTATGTCGATCTAT--TGGTTTCT 5'& || |||. .|||||| &5' --------CTTGATGAAGCCAAAG- 3' Atxn3 mmu-miR-98 beg:1479 end:1489 pic:3' TTGTTATGTTGAATGATGGAGT 5'& ||||||| &5' --------------CTACCTC- 3' Atxn3 mmu-miR-99bstar beg:2640 end:2658 pic:3' GCCTGGGTGTCTGTGCTCGAAC 5'& |||. | ||.|||||| &5' -GGAT-----GTCATGAGCTT- 3' Atxn3 mmu-miR-99bstar beg:346 end:364 pic:3' GCCTGGGTGTCTGTGCTCGAAC 5'& |.|.||| .|||||| &5' --GGCTCACT----TGAGCTT- 3' Atxn3 mmu-miR-470star beg:1276 end:1294 pic:3' AGAAGAGTCTTTCCATGACCAA 5'& .|| ||||||| &5' ------TAGTGCTCTACTGGT- 3' Atxn3 mmu-miR-1982.2 beg:1663 end:1682 pic:3' GACACCCTCTTG-TATCCCACT 5'& |||| |.| .||||||| &5' ---TGGGC-AGCTGTAGGGTG- 3' Atxn3 mmu-miR-376b beg:2172 end:2187 pic:3' TTCACCTACAAGGAGATACTA 5'& ||| .||||||| &5' ----GGAG----TTCTATGA- 3' Atxn3 mmu-miR-466j beg:1291 end:1309 pic:3' AATGTGTGTACGTGTACGTGTGT 5'& . ..||| | ||||||| &5' ----GTGTGTGCTC-TGCACAC- 3' Atxn3 mmu-miR-466h beg:1293 end:1309 pic:3' ATGTGTGTTCGTGT-ACGTGTGT 5'& | | ||||||| &5' ---------GTGCTCTGCACAC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Atxn3 RAID00014517 mmu-miR-125b-5p miRNA MIMAT0000136 Atxn3 mRNA 110616 RIP-seq//RNA-seq 0.6606 Atxn3 RAID00090465 mmu-miR-466o-3p miRNA MIMAT0014886 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00090999 mmu-miR-144-3p miRNA MIMAT0000156 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00142549 mmu-miR-33-3p miRNA MIMAT0004666 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00157158 mmu-miR-495-3p miRNA MIMAT0003456 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00166157 mmu-miR-1192 miRNA MIMAT0005850 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00182131 mmu-miR-139-5p miRNA MIMAT0000656 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00288445 mmu-miR-496a-3p miRNA MIMAT0003738 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00412673 mmu-miR-138-2-3p miRNA MIMAT0016987 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00469387 mmu-miR-410-3p miRNA MIMAT0001091 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00494240 mmu-miR-489-3p miRNA MIMAT0003112 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID00504772 mmu-miR-181b-5p miRNA MIMAT0000673 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID00526379 mmu-miR-199b-5p miRNA MIMAT0000672 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID00597212 mmu-miR-5618-5p miRNA MIMAT0022363 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00612593 mmu-miR-488-3p miRNA MIMAT0003450 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00636319 mmu-miR-30d-3p miRNA MIMAT0017011 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00653596 mmu-miR-743b-3p miRNA MIMAT0004840 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00658690 mmu-miR-7243-3p miRNA MIMAT0029911 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00675329 mmu-miR-7660-3p miRNA MIMAT0029827 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00709996 mmu-miR-25-3p miRNA MIMAT0000652 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6478 Atxn3 RAID00741132 mmu-let-7f-2-3p miRNA MIMAT0017017 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00818128 mmu-miR-499-3p miRNA MIMAT0017254 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00851421 mmu-miR-669c-3p miRNA MIMAT0017253 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID00989188 mmu-miR-218-5p miRNA MIMAT0000663 Atxn3 mRNA 110616 CLIP-seq 0.5483 Atxn3 RAID01019993 mmu-miR-6961-3p miRNA MIMAT0027823 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01036065 mmu-miR-670-3p miRNA MIMAT0017242 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01131838 mmu-miR-202-3p miRNA MIMAT0000235 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01174103 mmu-miR-376b-3p miRNA MIMAT0001092 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01177475 mmu-miR-133a-3p miRNA MIMAT0000145 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01210033 mmu-miR-340-5p miRNA MIMAT0004651 Atxn3 mRNA 110616 NGS (Next Generation Sequencing) 0.5483 Atxn3 RAID01223719 mmu-miR-425-5p miRNA MIMAT0004750 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID01276321 mmu-miR-30f miRNA MIMAT0025179 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01280811 mmu-miR-670-5p miRNA MIMAT0003736 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01318020 mmu-miR-3094-3p miRNA MIMAT0014910 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01507698 mmu-miR-6481 miRNA MIMAT0027339 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01544204 mmu-miR-17-5p miRNA MIMAT0000649 Atxn3 mRNA 110616 NGS (Next Generation Sequencing) 0.5483 Atxn3 RAID01552591 mmu-miR-5114 miRNA MIMAT0020622 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01579373 mmu-miR-494-3p miRNA MIMAT0003182 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01588158 mmu-miR-376c-3p miRNA MIMAT0003183 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01617553 mmu-miR-335-3p miRNA MIMAT0004704 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01680344 mmu-miR-872-5p miRNA MIMAT0004934 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01726461 mmu-miR-92b-3p miRNA MIMAT0004899 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6592 Atxn3 RAID01749012 mmu-miR-6974-5p miRNA MIMAT0027850 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01830951 mmu-miR-299a-3p miRNA MIMAT0004577 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01880646 mmu-miR-133b-3p miRNA MIMAT0000769 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01895540 mmu-miR-377-3p miRNA MIMAT0000741 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01910470 mmu-miR-499-5p miRNA MIMAT0003482 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01935896 mmu-miR-7061-5p miRNA MIMAT0028026 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID01969964 mmu-miR-421-3p miRNA MIMAT0004869 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID01995532 mmu-miR-290b-5p miRNA MIMAT0029900 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02078576 mmu-miR-590-3p miRNA MIMAT0004896 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6308 Atxn3 RAID02081389 mmu-miR-181d-5p miRNA MIMAT0004324 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID02108776 mmu-miR-6963-3p miRNA MIMAT0027827 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02116245 mmu-miR-7119-3p miRNA MIMAT0028136 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02132588 mmu-miR-125a-5p miRNA MIMAT0000135 Atxn3 mRNA 110616 RIP-seq//RNA-seq 0.6606 Atxn3 RAID02134368 mmu-miR-669n miRNA MIMAT0009427 Atxn3 mRNA 110616 CLIP-seq 0.5483 Atxn3 RAID02167969 mmu-miR-367-3p miRNA MIMAT0003181 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6478 Atxn3 RAID02169345 mmu-miR-7675-3p miRNA MIMAT0029859 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02200120 mmu-miR-181a-5p miRNA MIMAT0000210 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID02285072 mmu-miR-692 miRNA MIMAT0003471 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02289082 mmu-miR-216b-5p miRNA MIMAT0003729 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02357686 mmu-miR-486a-5p miRNA MIMAT0003130 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02386004 mmu-miR-141-3p miRNA MIMAT0000153 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02399435 mmu-miR-30a-3p miRNA MIMAT0000129 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6308 Atxn3 RAID02402287 mmu-miR-3620-3p miRNA MIMAT0029879 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02430306 mmu-miR-96-5p miRNA MIMAT0000541 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID02443017 mmu-miR-181c-5p miRNA MIMAT0000674 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID02450930 mmu-miR-9769-5p miRNA MIMAT0036461 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02503540 mmu-miR-92a-3p miRNA MIMAT0000539 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6559 Atxn3 RAID02516018 mmu-miR-16-5p miRNA MIMAT0000527 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02621555 mmu-miR-15a-5p miRNA MIMAT0000526 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02655823 mmu-miR-205-3p miRNA MIMAT0017003 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02657863 mmu-miR-32-5p miRNA MIMAT0000654 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6559 Atxn3 RAID02703206 mmu-miR-129-5p miRNA MIMAT0000209 Atxn3 mRNA 110616 CLIP-seq 0.5483 Atxn3 RAID02718622 mmu-miR-5622-5p miRNA MIMAT0022371 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02731909 mmu-miR-5627-3p miRNA MIMAT0022386 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02767021 mmu-miR-7215-5p miRNA MIMAT0028398 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02842421 mmu-miR-9-5p miRNA MIMAT0000142 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02903465 mmu-miR-676-5p miRNA MIMAT0003781 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02906480 mmu-miR-743a-3p miRNA MIMAT0004238 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02907275 mmu-miR-7212-3p miRNA MIMAT0028393 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02924591 mmu-miR-217-5p miRNA MIMAT0000679 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02966665 mmu-miR-672-3p miRNA MIMAT0017241 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID02970842 mmu-miR-195a-5p miRNA MIMAT0000225 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03026191 mmu-miR-543-3p miRNA MIMAT0003168 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID03053515 mmu-miR-5104 miRNA MIMAT0020611 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6308 Atxn3 RAID03074382 mmu-miR-203-3p miRNA MIMAT0000236 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID03081868 mmu-miR-328-3p miRNA MIMAT0000565 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03138010 mmu-miR-713 miRNA MIMAT0003504 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03165249 mmu-miR-107-3p miRNA MIMAT0000647 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03187205 mmu-miR-320-3p miRNA MIMAT0000666 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID03190030 mmu-miR-23a-3p miRNA MIMAT0000532 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03222659 mmu-miR-324-3p miRNA MIMAT0000556 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03268925 mmu-miR-3572-3p miRNA MIMAT0020636 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03350258 mmu-miR-680 miRNA MIMAT0003457 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03393649 mmu-miR-384-3p miRNA MIMAT0001076 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03418451 mmu-miR-322-5p miRNA MIMAT0000548 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03429031 mmu-miR-31-5p miRNA MIMAT0000538 Atxn3 mRNA 110616 Prediction 0.2202 Atxn3 RAID03498403 mmu-miR-497a-5p miRNA MIMAT0003453 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03504994 mmu-miR-764-5p miRNA MIMAT0003894 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03526379 mmu-miR-7051-5p miRNA MIMAT0028006 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03532528 mmu-miR-592-5p miRNA MIMAT0003730 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03541485 mmu-miR-7668-5p miRNA MIMAT0029842 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03592972 mmu-miR-7118-3p miRNA MIMAT0028134 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03607269 mmu-miR-1912-3p miRNA MIMAT0014958 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03707720 mmu-miR-466m-3p miRNA MIMAT0014883 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03736909 mmu-miR-6953-3p miRNA MIMAT0027807 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03746600 mmu-miR-103-3p miRNA MIMAT0000546 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03785567 mmu-miR-7229-3p miRNA MIMAT0028427 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03809575 mmu-miR-335-5p miRNA MIMAT0000766 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03816011 mmu-miR-327 miRNA MIMAT0004867 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03832121 mmu-miR-758-3p miRNA MIMAT0003889 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03845300 mmu-miR-3066-3p miRNA MIMAT0014839 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03898797 mmu-miR-7079-3p miRNA MIMAT0028065 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03934241 mmu-miR-199a-5p miRNA MIMAT0000229 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03935344 mmu-miR-15b-5p miRNA MIMAT0000124 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03947034 mmu-miR-363-3p miRNA MIMAT0000708 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6478 Atxn3 RAID03965793 mmu-miR-7674-5p miRNA MIMAT0029856 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID03980034 mmu-miR-153-3p miRNA MIMAT0000163 Atxn3 mRNA 110616 Prediction 0.1828 Atxn3 RAID04059468 mmu-miR-30e-3p miRNA MIMAT0000249 Atxn3 mRNA 110616 CLIP-seq//Prediction 0.6308