DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 71991 Ercc8 auuuGGUGGUAUACUUUG-GUCg || :| |:|||||| ||| aauuCCUUCCUGUGAAACUCAGc 2 19 2045 2067 [mm9:13:108985113-108985135:+] 0.5709 130 0 -21.30 -0.6587 MIMAT0004523 mmu-miR-29b* 71991 Ercc8 auuuGGUGGUAUACUUUG-GUCg || :| |:|||||| ||| aauuCCUUCCUGUGAAACUCAGc 2 19 795 817 [mm9:13:108985113-108985135:+] 0.5709 130 0 -21.30 -0.9277 MIMAT0003473 mmu-miR-133a* 71991 Ercc8 uaaaccaagguaaaAUGGUCg |||||| aaacauaauaaauaUACCAGa 2 8 460 480 [mm9:13:108964767-108964787:+] 0.5061 120 6 -9.21 -0.3595 MIMAT0004531 mmu-miR-135a* 71991 Ercc8 gcGGUGCCGAGGUUAGGGA-UAu :|: | |||: ||||| || aaUCGAGCCUCUUCUCCCUCAUa 2 21 1918 1940 [mm9:13:108984986-108985008:+] 0.5492 120 0 -16.96 -0.7439 MIMAT0004531 mmu-miR-135a* 71991 Ercc8 gcGGUGCCGAGGUUAGGGA-UAu :|: | |||: ||||| || aaUCGAGCCUCUUCUCCCUCAUa 2 21 668 690 [mm9:13:108984986-108985008:+] 0.5492 120 0 -16.96 -0.9987 MIMAT0004532 mmu-miR-136* 71991 Ercc8 uucUGAGUA-AACU-CUGCUACUa ::|| | ||| |||||||| ccaGUUCCUGAUGAUGACGAUGAa 2 20 1158 1181 [mm9:13:108977451-108977474:+] 0.6727 153 7 -15.84 -0.4901 MIMAT0004533 mmu-miR-141* 71991 Ercc8 agGUUGUGAC----GUGA---CCUUCUAc |:|||:|| |::| ||||||| cuCGACAUUGAGCCCGUUGAAGGAAGAUa 2 21 201 229 [mm9:13:108950896-108950924:+] 0.6893 146 7 -19.49 -0.7921 MIMAT0004534 mmu-miR-145* 71991 Ercc8 guucUUGUCAUAAAGGUCCUUa |:| ||||||||||| uuccAGCCUAAUUUCCAGGAAc 2 19 1080 1101 [mm9:13:108974099-108974116,108977391-108977394:+] 0.6938 162 7 -17.66 -0.7642 MIMAT0004534 mmu-miR-145* 71991 Ercc8 guuCUUGUCAUA-AAGGUCCUUa ||| ||||| ||||||| gcuGAA-AGUAUGACCCAGGAAg 2 20 504 525 [mm9:13:108984822-108984843:+] 0.5492 156 7 -17.49 -0.1060 MIMAT0004537 mmu-miR-154* 71991 Ercc8 uuaUCCAGUUGGCACAUACUAa || ||:| :||||||||| augAGAUCGA-UGUGUAUGAUa 2 20 1587 1607 [mm9:13:108984655-108984675:+] 0.5683 165 7 -17.98 -0.6368 MIMAT0004537 mmu-miR-154* 71991 Ercc8 uuaUCCAGUUGGCACAUACUAa || ||:| :||||||||| augAGAUCGA-UGUGUAUGAUa 2 20 337 357 [mm9:13:108984655-108984675:+] 0.5683 165 7 -17.98 -0.9119 MIMAT0004541 mmu-miR-188-3p 71991 Ercc8 acgUUUGGGACGU--ACACCCUc ||||:||| | ||||||| auaAAACUCUGAAAGUGUGGGAu 2 19 316 338 [mm9:13:108959648-108959670:+] 0.7281 165 7 -24.42 -0.7273 MIMAT0000367 mmu-miR-291a-5p 71991 Ercc8 ucucucccGGA--GGUGAAAC-UAc ||| |||||||| || aggcaaucCCUGACCACUUUGUAUu 2 15 740 764 [mm9:13:108985058-108985082:+] 0.5354 121 0 -15.60 -0.1382 MIMAT0004574 mmu-miR-294* 71991 Ercc8 ucUAUCCCGGAGGUAAAACUCa | | | :|: |||||||| gcAGAUGUGUUUAAUUUUGAGg 2 21 357 378 [mm9:13:108962899-108962920:+] 0.7145 152 7 -14.56 -0.6813 MIMAT0004574 mmu-miR-294* 71991 Ercc8 ucuaucccggAGGUAAAACUCa |: :||||||| cccguuauugUUGGUUUUGAGa 2 13 1328 1349 [mm9:13:108984396-108984417:+] 0.4957 144 7 -8.68 -0.1528 MIMAT0004574 mmu-miR-294* 71991 Ercc8 ucuaucccggAGGUAAAACUCa |: :||||||| cccguuauugUUGGUUUUGAGa 2 13 78 99 [mm9:13:108984396-108984417:+] 0.4957 144 7 -8.68 -0.3161 MIMAT0004575 mmu-miR-295* 71991 Ercc8 cuuCACAC--GGGGUGUA-AACUCa ||||| ||| | || ||||| gguGUGUGGACCCGAGAUGUUGAGc 2 20 41 65 [mm9:13:108948972-108948996:+] 0.6765 130 0 -21.63 -0.1679 MIMAT0000375 mmu-miR-297a 71991 Ercc8 ugUACGUGUACGUGUGU-AUGUa |||| || | : ||| |||| ccAUGCUCAAG-GGACAUUACAa 2 21 1039 1060 [mm9:13:108974058-108974079:+] 0.7420 122 0 -15.78 -0.4828 MIMAT0004578 mmu-miR-300* 71991 Ercc8 uguuuccuauuggaGAGAAGUu ||||||| ucauuguuuguaaaCUCUUCAg 2 9 1511 1532 [mm9:13:108984579-108984600:+] 0.4822 140 7 -13.89 -0.5579 MIMAT0004578 mmu-miR-300* 71991 Ercc8 uguuuccuauuggaGAGAAGUu ||||||| ucauuguuuguaaaCUCUUCAg 2 9 261 282 [mm9:13:108984579-108984600:+] 0.4822 140 7 -13.89 -0.8417 MIMAT0004583 mmu-miR-130b* 71991 Ercc8 ucaucacgUUGUCCCUUUCUCa |||: |||||||| aaccauuaAACGAGGAAAGAGa 2 15 237 258 [mm9:13:108964544-108964565:+] 0.4996 158 7 -16.98 -0.5867 MIMAT0004617 mmu-miR-148a* 71991 Ercc8 ucAGCC--UCACAGAGUCUUGAAa |||| | | ||||||||| ugUCGGUUAAUUAAUCAGAACUUg 2 21 1626 1649 [mm9:13:108984694-108984717:+] 0.5671 155 7 -20.93 -0.2748 MIMAT0004617 mmu-miR-148a* 71991 Ercc8 ucAGCC--UCACAGAGUCUUGAAa |||| | | ||||||||| ugUCGGUUAAUUAAUCAGAACUUg 2 21 376 399 [mm9:13:108984694-108984717:+] 0.5671 155 7 -20.93 -0.4985 MIMAT0004626 mmu-miR-18a* 71991 Ercc8 gucuUCCUCGUGAAUC-CCGUCa || :| ||| || ||||| gcucAGAGGAACUCAGAGGCAGg 2 19 169 191 [mm9:13:108964476-108964498:+] 0.4944 126 0 -21.76 -0.2955 MIMAT0004626 mmu-miR-18a* 71991 Ercc8 gucuuccucGUGAAUCCCGUCa | | ||||||| uguauugcuCUCAGAGGGCAGc 2 14 759 780 [mm9:13:108985077-108985098:+] 0.5531 141 7 -16.26 -0.1722 MIMAT0004627 mmu-miR-20a* 71991 Ercc8 gaaaUUCACGAGCAUUAC-GUCa ||| |: :|||||| ||| ugggAAG-GUGUGUAAUGACAGc 2 19 908 929 [mm9:13:108973927-108973948:+] 0.7420 124 0 -15.81 -0.3816 MIMAT0004627 mmu-miR-20a* 71991 Ercc8 gaaauUCA-CG-AGCAUUACG-UCa ||| || || |||||| || gcaacAGUGGCAUCAUAAUGCUAGa 2 18 1864 1888 [mm9:13:108984932-108984956:+] 0.5492 123 0 -12.37 -0.7056 MIMAT0004627 mmu-miR-20a* 71991 Ercc8 gaaauucacgagCAUUACGUCa | ||||||| caggggaaauagGAAAUGCAGc 2 11 188 209 [mm9:13:108964495-108964516:+] 0.5084 142 7 -8.59 -0.2490 MIMAT0004627 mmu-miR-20a* 71991 Ercc8 gaAAU-UCAC---GAG-CAUUACGUca ||| | || ||| | |||||| ugUUAGAAUGAAACUCAGAAAUGCAca 3 21 415 441 [mm9:13:108964722-108964748:+] 0.5132 129 0 -9.51 -0.1911 MIMAT0004627 mmu-miR-20a* 71991 Ercc8 gaaauUCA-CG-AGCAUUACG-UCa ||| || || |||||| || gcaacAGUGGCAUCAUAAUGCUAGa 2 18 614 638 [mm9:13:108984932-108984956:+] 0.5492 123 0 -12.37 -0.9676 MIMAT0004630 mmu-miR-26b* 71991 Ercc8 cucgguucauuaccUCUUGUCc ||||||| acgggcacagcccaAGAACAGa 2 9 1690 1711 [mm9:13:108984758-108984779:+] 0.5350 140 7 -14.60 -0.2517 MIMAT0004630 mmu-miR-26b* 71991 Ercc8 cucgguucauuaccUCUUGUCc ||||||| acgggcacagcccaAGAACAGa 2 9 440 461 [mm9:13:108984758-108984779:+] 0.5350 140 7 -14.60 -0.4629 MIMAT0004631 mmu-miR-29a* 71991 Ercc8 gacuUGUGGUUUU-CUUU-AGUCa |::::|:|| |||| |||| ugucAUGUUAGAAUGAAACUCAGa 2 19 410 433 [mm9:13:108964717-108964740:+] 0.5168 125 0 -12.75 -1.0715 MIMAT0000544 mmu-miR-129-3p 71991 Ercc8 uacgaaaaaccCCAUUCCCGAa || ||||||| uaaugacagcaGGAAAGGGCUg 2 12 920 941 [mm9:13:108973939-108973960:+] 0.7420 147 7 -14.46 -0.1877 MIMAT0000549 mmu-miR-322* 71991 Ercc8 cacAACGUCGCGAAGU-ACAAa |||: :|:|||| |||| ugaUUGU-UUGUUUCAUUGUUu 2 19 1499 1519 [mm9:13:108984567-108984587:+] 0.4822 120 0 -13.21 -0.4799 MIMAT0000549 mmu-miR-322* 71991 Ercc8 cacaacgucgcgaAGUACAAa ||||||| auuccaaacaaugUCAUGUUa 2 9 399 419 [mm9:13:108964706-108964726:+] 0.5168 140 7 -8.94 -0.7593 MIMAT0000549 mmu-miR-322* 71991 Ercc8 cacAACGUCGCGAAGU-ACAAa |||: :|:|||| |||| ugaUUGU-UUGUUUCAUUGUUu 2 19 249 269 [mm9:13:108984567-108984587:+] 0.4822 120 0 -13.21 -0.7620 MIMAT0000556 mmu-miR-324-3p 71991 Ercc8 ucgUCGUGGACCCCGUCACc || |:| ||||||| gaaAGAAUCCAUGGCAGUGg 2 18 171 190 [mm9:13:108950866-108950885:+] 0.6893 149 7 -19.97 -0.3167 MIMAT0000578 mmu-miR-337-3p 71991 Ercc8 ucCGUAGUAUAUCCUCGACUu ||||| | ||||||||| guGCAUC-CA-AGGAGCUGAa 2 20 1741 1759 [mm9:13:108984809-108984827:+] 0.5492 159 7 -23.26 -0.3532 MIMAT0000578 mmu-miR-337-3p 71991 Ercc8 ucCGUAGUAUAUCCUCGACUu ||||| | ||||||||| guGCAUC-CA-AGGAGCUGAa 2 20 491 509 [mm9:13:108984809-108984827:+] 0.5492 159 7 -23.26 -0.6035 MIMAT0000605 mmu-miR-350 71991 Ercc8 cuUUCACAUACCCGAAACACUu ||| ||| |||||||| ccAAG-GUA-CAACUUUGUGAc 2 21 451 470 [mm9:13:108964201-108964220:+] 0.7040 148 7 -12.17 -0.5090 MIMAT0000650 mmu-miR-17* 71991 Ercc8 gauguucaCGGGAGUGA-CGUCa ||:| |||| |||| cagacucgGCUCACACUGGCAGc 2 15 157 179 [mm9:13:108984475-108984497:+] 0.4935 122 0 -17.90 -0.2076 MIMAT0004662 mmu-miR-139-3p 71991 Ercc8 gagGUUGUCCCGGC-GCA-GAGGu || ::|||::| ||| |||| ugaCACUGGGGUUGUCGUCCUCCa 2 20 601 624 [mm9:13:108966028-108966051:+] 0.5007 126 0 -26.20 -0.1181 MIMAT0005444 mmu-miR-218-2* 71991 Ercc8 gcgCCACGAACUGUCUU-GGUAc | || | || |||| |||| aggGAUG-UGGAAAGAAUCCAUg 2 20 162 183 [mm9:13:108950857-108950878:+] 0.6893 121 0 -16.61 -0.1696 MIMAT0000672 mmu-miR-199b* 71991 Ercc8 cuuguCCAUCAGAUU--UGUGACCc |||| || | ||||||| ucaguGGUAUCCUCAUGACACUGGc 2 19 269 293 [mm9:13:108959601-108959625:+] 0.7281 153 7 -17.15 -0.3166 MIMAT0000742 mmu-miR-378* 71991 Ercc8 ugUGUCCUGGAC----CU--CAGUCCUc |::|||: || || ||||||| uuAUGGGAUGUGAGAAGAGCGUCAGGAu 2 21 693 720 [mm9:13:108967830-108967857:+] 0.7529 146 7 -20.43 -0.2614 MIMAT0004704 mmu-miR-335-3p 71991 Ercc8 ccaguccucguuAU-UACUUUUu || ||||||| cccggcuguuucUACAUGAAAAc 2 11 217 239 [mm9:13:108964524-108964546:+] 0.5055 141 7 -6.40 -0.2256 MIMAT0004217 mmu-miR-465a-3p 71991 Ercc8 agAUGAAU-CUUUCCGGGACUag |:: || || | |||||| gaUGUGUAUGAUA--CCCUGAaa 3 21 345 365 [mm9:13:108984663-108984683:+] 0.5683 124 0 -10.59 -0.1601 MIMAT0002109 mmu-miR-468 71991 Ercc8 guCUGUGUGCGUGUAGUCAGUAu || ||| |: :| ||||||| agGAAACA-GUUUA-CAGUCAUc 2 22 376 396 [mm9:13:108962918-108962938:+] 0.7145 153 7 -13.93 -0.7526 MIMAT0002109 mmu-miR-468 71991 Ercc8 guCUGUGUGCGUGUA-GUC-AGUAu |:||::: ||||| ||| |||| cuGGCAUGUUCACAUCCAGCUCAUu 2 22 289 313 [mm9:13:108959621-108959645:+] 0.7281 136 0 -18.23 -0.5394 MIMAT0004760 mmu-miR-470* 71991 Ercc8 agAAGAGUC-UUU-C--CA-UGACCAa ||||: | ||| | || |||||| ugUUCUUUGUAAAUGACGUGACUGGUg 2 21 34 60 [mm9:13:108964341-108964367:+] 0.6521 121 6 -11.17 -0.7047 MIMAT0003129 mmu-miR-485* 71991 Ercc8 cucuccUCUCGGC--ACAUACUGa :||||:| ||||||| auccaaGGAGCUGAAAGUAUGACc 2 17 1745 1768 [mm9:13:108984813-108984836:+] 0.5492 151 7 -18.98 -0.1869 MIMAT0003129 mmu-miR-485* 71991 Ercc8 cucuCCUCUCGGCACA-UACUGa ||: || :|||| ||||| cuauGGGAAGGUGUGUAAUGACa 2 19 905 927 [mm9:13:108973924-108973946:+] 0.7420 130 0 -19.57 -0.4569 MIMAT0003129 mmu-miR-485* 71991 Ercc8 cucuccUCUCGGC--ACAUACUGa :||||:| ||||||| auccaaGGAGCUGAAAGUAUGACc 2 17 495 518 [mm9:13:108984813-108984836:+] 0.5492 151 7 -18.98 -0.3614 MIMAT0003166 mmu-miR-546 71991 Ercc8 cugaggcaCGGUGGUa ||||||| ccccagcaGCCACCAa 2 9 403 418 [mm9:13:108962945-108962960:+] 0.7145 140 7 -13.77 -0.7373 MIMAT0003170 mmu-miR-541 71991 Ercc8 ucaCACUGGUUGUAGUC-UUAGGGAa || |:| |||| :| ||||||| aucGU-AUC-ACAUAGGCAAUCCCUg 2 23 728 751 [mm9:13:108985046-108985069:+] 0.5354 157 7 -16.59 -0.1319 MIMAT0005295 mmu-miR-376c* 71991 Ercc8 auUUGUAUCUUCCUUAUA-GGUg ||||| || ||||| ||| gaAACAU--AAUAAAUAUACCAg 2 21 459 479 [mm9:13:108964766-108964786:+] 0.5061 125 0 -10.15 -1.2705 MIMAT0004788 mmu-miR-20b* 71991 Ercc8 gaucuucaCGAGUGUGA-CGUCa ||||||||| |||| cagacucgGCUCACACUGGCAGc 2 15 157 179 [mm9:13:108984475-108984497:+] 0.4935 134 0 -24.33 -0.2056 MIMAT0003189 mmu-miR-291b-5p 71991 Ercc8 ccucucccGGA--GGUGAAAC-UAg ||| |||||||| || aggcaaucCCUGACCACUUUGUAUu 2 15 740 764 [mm9:13:108985058-108985082:+] 0.5354 121 0 -15.63 -0.1382 MIMAT0003190 mmu-miR-291b-3p 71991 Ercc8 uguUUGUU-UUACCUACGUGAAa :|||: : || :||||||| cacGACAGUGUUGUGUGCACUUc 2 20 34 56 [mm9:13:108984352-108984374:+] 0.5383 154 7 -16.19 -0.1474 MIMAT0003376 mmu-miR-302c 71991 Ercc8 gguGACUUUGUACCUUCGUGAa | | |:| ||||||| cccCAGCAGCCACCAAGCACUg 2 20 403 424 [mm9:13:108962945-108962966:+] 0.7145 143 7 -11.77 -0.1316 MIMAT0005460 mmu-miR-1224 71991 Ercc8 gaGGUGGAGGGGUCAGG-AGUg |:: ||||:: |||| ||| ccCUGGCUCCUU-GUCCAUCAg 2 20 1258 1278 [mm9:13:108984326-108984346:+] 0.5765 121 0 -20.77 -0.1096 MIMAT0005460 mmu-miR-1224 71991 Ercc8 gaGGUGGAGGGGUCAGG-AGUg |:: ||||:: |||| ||| ccCUGGCUCCUU-GUCCAUCAg 2 20 8 28 [mm9:13:108984326-108984346:+] 0.5765 121 0 -20.77 -0.3810 MIMAT0004820 mmu-miR-744* 71991 Ercc8 uccaacuccaaucACCGUUGUc |||||||| caugacuauaucuUGGCAACAg 2 10 546 567 [mm9:13:108965789-108965810:+] 0.6548 145 7 -15.52 -0.3279 MIMAT0003895 mmu-miR-764-3p 71991 Ercc8 ugucaacgGUGAUACCGGAGGa |:| ||||||| cauggcagCGCCCAGGCCUCCa 2 15 16 37 [mm9:13:108948947-108948968:+] 0.6162 142 7 -21.53 -0.3076 MIMAT0014816 mmu-miR-3099 71991 Ercc8 agggGUUGGAGAGAGAUCGGAu :|||| || ||||||| gaugUAACC-CUGGCUAGCCUg 2 19 111 131 [mm9:13:108984429-108984449:+] 0.4957 156 7 -23.54 -0.1352 MIMAT0003896 mmu-miR-763 71991 Ercc8 cgGUGACC-AAGAAG----GGUCGAcc |||||| | ||| |||||| gaCACUGGCAUGUUCACAUCCAGCUca 3 21 285 311 [mm9:13:108959617-108959643:+] 0.7281 134 0 -21.69 -0.1065 MIMAT0003896 mmu-miR-763 71991 Ercc8 cggUGACCAAGAAGGGUCGACc ||| ||| |||||||||| cagACUUGUUAUUCCCAGCUGg 2 20 458 479 [mm9:13:108984776-108984797:+] 0.5350 179 7 -28.58 -0.1956 MIMAT0004823 mmu-miR-666-3p 71991 Ercc8 ucguccgCUAGUGCGA-CGUCGg | |||| || ||||| agacucgGCUCACACUGGCAGCu 2 16 158 180 [mm9:13:108984476-108984498:+] 0.4935 123 0 -20.17 -0.1201 MIMAT0003897 mmu-miR-759 71991 Ercc8 caguuUUAACAAACGUGAGACg | ||| | |||||| agcucAUUUGAUAAAACUCUGa 2 18 306 327 [mm9:13:108959638-108959659:+] 0.7281 121 6 -12.02 -0.1231 MIMAT0003897 mmu-miR-759 71991 Ercc8 caguuUUAACAAAC-GUGAG-ACg :| |||| | ||||| || auauuGAAUGUUAGCCACUCAUGc 2 18 1938 1961 [mm9:13:108985006-108985029:+] 0.5423 120 0 -13.28 -0.2308 MIMAT0003897 mmu-miR-759 71991 Ercc8 caguuUUAACAAAC-GUGAG-ACg :| |||| | ||||| || auauuGAAUGUUAGCCACUCAUGc 2 18 688 711 [mm9:13:108985006-108985029:+] 0.5423 120 0 -13.28 -0.4313 MIMAT0004824 mmu-miR-673-3p 71991 Ercc8 ccacgUGUCUUGAG--UCGGGGCCu |:: |:||| |||||||| aggaaAUGCAGCUCGGAGCCCCGGc 2 19 198 222 [mm9:13:108964505-108964529:+] 0.5225 157 7 -26.64 -0.1637 MIMAT0003898 mmu-miR-760 71991 Ercc8 agGGGUGUCUGGGUC-UCGGc | ||:: ||||| |||| auCACAUGUCCCCAGCAGCCa 2 19 394 414 [mm9:13:108962936-108962956:+] 0.7145 122 0 -22.44 -0.3845 MIMAT0003452 mmu-miR-678 71991 Ercc8 ggaGGUCAGGAACGU-GGCUCUg ||:|| : || | |||||| cagCCGGUGUGUGGACCCGAGAu 2 20 36 58 [mm9:13:108948967-108948989:+] 0.6463 127 6 -23.08 -0.2749 MIMAT0004825 mmu-miR-423-5p 71991 Ercc8 uuuCAGAGCGAGAGACGGGGAGu || | | | : ||||||| gguGUAUACCACGUGGCCCCUCc 2 21 1464 1486 [mm9:13:108984532-108984554:+] 0.5000 148 7 -18.98 -0.1754 MIMAT0004825 mmu-miR-423-5p 71991 Ercc8 uuuCAGAGCGAGAGACGGGGAGu || | | | : ||||||| gguGUAUACCACGUGGCCCCUCc 2 21 214 236 [mm9:13:108984532-108984554:+] 0.5000 148 7 -18.98 -0.3502 MIMAT0003455 mmu-miR-679 71991 Ercc8 ugguucuCAGUGGAG-UGUCAGg ||| ||| |||||| gcuuuuuGUCCGCUCGACAGUCg 2 16 64 86 [mm9:13:108948995-108949017:+] 0.6765 123 6 -17.24 -0.1224 MIMAT0003459 mmu-miR-682 71991 Ercc8 gucugaagUGACACUGACGUc :| | ||||||| caguggaaGCAGGGACUGCAa 2 14 1106 1126 [mm9:13:108977399-108977419:+] 0.6591 145 7 -13.76 -0.5398 MIMAT0003459 mmu-miR-682 71991 Ercc8 gucugaagUGACACUGACGUc :| ||||||||| uucuaugaGCAGUGACUGCAa 2 14 143 163 [mm9:13:108964450-108964470:+] 0.5254 153 7 -15.06 -0.7898 MIMAT0003461 mmu-miR-683 71991 Ercc8 cuccugugucgAAUGUCGUCc | ||||||| aagguguguaaUGACAGCAGg 2 11 912 932 [mm9:13:108973931-108973951:+] 0.7420 142 7 -19.24 -0.3640 MIMAT0003468 mmu-miR-689 71991 Ercc8 ccuggggcGGCUCGCCCCUGc :| ||||||||| ggaauagcUCCAGCGGGGACa 2 14 871 891 [mm9:13:108968862-108968882:+] 0.6277 153 7 -25.11 -0.1926 MIMAT0003471 mmu-miR-692 71991 Ercc8 cucACUCCGCGAGUUUCUCUa | | || ||||||| ccaUUAAACGAGGAAAGAGAc 2 19 239 259 [mm9:13:108964546-108964566:+] 0.4882 142 7 -11.05 -0.1528 MIMAT0003472 mmu-miR-693-5p 71991 Ercc8 cuuuugaaagCCUACACCGAc | :||||||| gggucaugaaGAGUGUGGCUa 2 12 262 282 [mm9:13:108964569-108964589:+] 0.5008 143 7 -12.29 -0.3620 MIMAT0004189 mmu-miR-693-3p 71991 Ercc8 aaUGUCGGUGUA--GACUUUC-GACg ||| |: ::| || |||| ||| guACAACUUUGUGACUUAAAGUCUGg 2 22 456 481 [mm9:13:108964206-108964231:+] 0.7040 120 0 -11.94 -0.5282 MIMAT0003476 mmu-miR-669b 71991 Ercc8 ugUACGUGUACGUGUGUUU-UGa || | |||: |||||| || ccAUCCCGAUGUUCACAAAUACa 2 21 233 255 [mm9:13:108959565-108959587:+] 0.7281 128 0 -11.07 -0.4955 MIMAT0003480 mmu-miR-297b-5p 71991 Ercc8 ugUACAAGUACGUGUGU-AUGUa ||| ||| | : ||| |||| ccAUGCUCAAG-GGACAUUACAa 2 21 1039 1060 [mm9:13:108974058-108974079:+] 0.7420 122 0 -14.12 -0.4794 MIMAT0003494 mmu-miR-704 71991 Ercc8 gauccucGUC--UCGUGUACAGa ||| | |||||||| caguuuaCAGUCAUCACAUGUCc 2 15 382 404 [mm9:13:108962924-108962946:+] 0.7145 149 7 -16.16 -0.2620 MIMAT0003497 mmu-miR-707 71991 Ercc8 gcAUCCGU-UCGCCGUACUGAc |:| || || ||||||| ccUGGUCACCACGCCAUGACUa 2 20 532 553 [mm9:13:108965775-108965796:+] 0.6548 150 7 -13.48 -0.2896 MIMAT0003499 mmu-miR-709 71991 Ercc8 aggaggacgGAGACGGAGg :|||||||| uggcagcuaUUCUGCCUCu 2 11 173 191 [mm9:13:108984491-108984509:+] 0.4967 146 7 -19.34 -0.1454 MIMAT0003500 mmu-miR-710 71991 Ercc8 gaguugagagggguUCUGAACc ||||||| cacagcccaagaacAGACUUGu 2 9 1695 1716 [mm9:13:108984763-108984784:+] 0.5350 140 7 -14.40 -0.1421 MIMAT0003500 mmu-miR-710 71991 Ercc8 gaguugagagggguUCUGAACc ||||||| cacagcccaagaacAGACUUGu 2 9 445 466 [mm9:13:108984763-108984784:+] 0.5350 140 7 -14.40 -0.2848 MIMAT0003502 mmu-miR-712 71991 Ercc8 ccauggCGGGCCCACUUCCUc |||| | ||||||| cauugaGCCC-GUUGAAGGAa 2 16 206 225 [mm9:13:108950901-108950920:+] 0.6893 153 7 -20.11 -0.7138 MIMAT0003507 mmu-miR-500 71991 Ercc8 acuuggGAACGGGUCCACGUAa | || |: ||||||| aaaugaCGUGACU-GGUGCAUu 2 17 44 64 [mm9:13:108964351-108964371:+] 0.6521 146 7 -14.91 -0.5371 MIMAT0003508 mmu-miR-501-5p 71991 Ercc8 aaagugGGUCCCUGUUUC-CUAa ::||||| |||| ||| guaaggUUAGGGAGAAAGUGAUg 2 17 304 326 [mm9:13:108964611-108964633:+] 0.5201 128 0 -18.03 -0.2573 MIMAT0003509 mmu-miR-501-3p 71991 Ercc8 guUUA-GGAACGGGCCCACGUAa ||| | || |: ||||||| uaAAUGACGUGACU-GGUGCAUu 2 21 43 64 [mm9:13:108964350-108964371:+] 0.6521 149 7 -15.23 -0.5371 MIMAT0004237 mmu-miR-742 71991 Ercc8 aaaUGGGUCGUACCAC-CGAAAg ||||: ||| || ||||| uggACCCGAGAUGUUGAGCUUUu 2 20 47 69 [mm9:13:108948978-108949000:+] 0.6765 131 0 -19.01 -0.1431 MIMAT0004848 mmu-miR-883a-5p 71991 Ercc8 cauugacgaugaaGAGAGUCGu |||||||| augacccaggaagCUCUCAGCu 2 10 513 534 [mm9:13:108984831-108984852:+] 0.5492 145 7 -16.31 -0.1725 MIMAT0004848 mmu-miR-883a-5p 71991 Ercc8 cauugacgaugaagaGAGUCGu |||||| uuccuuccugugaaaCUCAGCa 2 8 797 818 [mm9:13:108985115-108985136:+] 0.5709 120 6 -14.17 -0.1049 MIMAT0004849 mmu-miR-883a-3p 71991 Ercc8 uaugaCUCUCGACAACGUCAAu || || | ||||||| agcagGAAAG-GGCUGCAGUUc 2 18 927 947 [mm9:13:108973946-108973966:+] 0.7420 147 7 -13.90 -0.1596 MIMAT0004851 mmu-miR-883b-3p 71991 Ercc8 uaugaCUCUCUACAACGUCAAu || ||: | ||||||| agcagGAAAGG-GCUGCAGUUc 2 18 927 947 [mm9:13:108973946-108973966:+] 0.7420 151 7 -12.72 -0.1596 MIMAT0004851 mmu-miR-883b-3p 71991 Ercc8 uaUGACUCUCUACAA-CGUCAAu || | || || || |||||| agACAG-GAAAUCUUGGCAGUUu 2 21 510 531 [mm9:13:108965753-108965774:+] 0.6548 126 6 -10.17 -0.2212 MIMAT0004872 mmu-miR-465b-3p 71991 Ercc8 agAUGAAU-CUUUCCGGGACUag |:: || || | |||||| gaUGUGUAUGAUA--CCCUGAaa 3 21 345 365 [mm9:13:108984663-108984683:+] 0.5683 124 0 -10.59 -0.1601 MIMAT0004874 mmu-miR-465c-3p 71991 Ercc8 agAUGAAU-CUUUCCGGGACUag |:: || || | |||||| gaUGUGUAUGAUA--CCCUGAaa 3 21 345 365 [mm9:13:108984663-108984683:+] 0.5683 124 0 -10.59 -0.1601 MIMAT0004882 mmu-miR-466f-3p 71991 Ercc8 cacacauacacacACACAUAc ||||||| aaaaugagaucgaUGUGUAUg 2 9 1584 1604 [mm9:13:108984652-108984672:+] 0.5683 140 7 -11.04 -0.4775 MIMAT0004882 mmu-miR-466f-3p 71991 Ercc8 cacacauacacacACACAUAc ||||||| aaaaugagaucgaUGUGUAUg 2 9 334 354 [mm9:13:108984652-108984672:+] 0.5683 140 7 -11.04 -0.7550 MIMAT0004888 mmu-miR-493 71991 Ercc8 ggaccguGUGUC-AUCCUGGAAGu | ||| |:|||||||| uguuauuCCCAGCUGGGACCUUCa 2 17 1714 1737 [mm9:13:108984782-108984805:+] 0.5421 159 7 -23.34 -0.2089 MIMAT0004888 mmu-miR-493 71991 Ercc8 ggaccguGUGUC-AUCCUGGAAGu | ||| |:|||||||| uguuauuCCCAGCUGGGACCUUCa 2 17 464 487 [mm9:13:108984782-108984805:+] 0.5421 159 7 -23.34 -0.3971 MIMAT0004890 mmu-miR-509-5p 71991 Ercc8 uacuaacgguguaaGACCUCAu ||||||| ggaggguccuggggCUGGAGUu 2 9 130 151 [mm9:13:108949061-108949064,108950829-108950846:+] 0.6796 140 7 -20.21 -0.1321 MIMAT0004932 mmu-miR-878-5p 71991 Ercc8 acagaACUGUAG-GU--UGAUCUAu ||:|||| :| :|||||| aacagUGGCAUCAUAAUGCUAGAUu 2 18 616 640 [mm9:13:108984934-108984958:+] 0.5492 139 6 -17.22 -0.1173 MIMAT0004933 mmu-miR-878-3p 71991 Ercc8 agaugggucacaccACAGUACg ||||||| cuaauuccaaacaaUGUCAUGu 2 9 396 417 [mm9:13:108964703-108964724:+] 0.5201 140 7 -13.87 -1.1458 MIMAT0004862 mmu-miR-877* 71991 Ercc8 acCCUCCUCCCUCUUCUCCUGu | || || | |||||||| uaGCAGUUGGAACAAGAGGACc 2 21 430 451 [mm9:13:108962972-108962977,108964186-108964201:+] 0.7092 160 7 -15.60 -0.4112 MIMAT0004942 mmu-miR-598 71991 Ercc8 auugcuacugcugcUACUGCAu ||||||| uguguucuuuguaaAUGACGUg 2 9 32 53 [mm9:13:108964339-108964360:+] 0.6521 140 7 -13.04 -0.8705 MIMAT0005292 mmu-miR-582-3p 71991 Ercc8 aacccaagUCAACAA-GUUGUCc | ||||| |||||| uuagagaaACUUGUUGCAACAGu 2 15 1849 1871 [mm9:13:108984917-108984939:+] 0.5492 126 6 -10.57 -0.4842 MIMAT0005292 mmu-miR-582-3p 71991 Ercc8 aaccCAAG-UCAACA----AGUUGUCc || | |||||| ||||||| uucuGUGCUAGUUGUUAAGUCAACAGa 2 19 63 89 [mm9:13:108964370-108964396:+] 0.6330 152 7 -15.88 -0.6296 MIMAT0005292 mmu-miR-582-3p 71991 Ercc8 aacccaagUCAACAA-GUUGUCc | ||||| |||||| uuagagaaACUUGUUGCAACAGu 2 15 599 621 [mm9:13:108984917-108984939:+] 0.5492 126 6 -10.57 -0.7581 MIMAT0005833 mmu-miR-669d 71991 Ercc8 ugUAUAUGUACGUGUGU-GUUCa |||| : ||| ||| |||| cuAUAUCUUGGCA-ACAGCAAGg 2 21 551 572 [mm9:13:108965794-108965814,108965999-108965999:+] 0.5777 122 0 -10.83 -0.1645 MIMAT0005834 mmu-miR-466i 71991 Ercc8 aucacacAUACAC--ACACACAUa |||| | ||||||| ggugaacUAUGGGAAGGUGUGUAa 2 16 899 922 [mm9:13:108968890-108968890,108973919-108973941:+] 0.6848 146 7 -15.34 -0.3478 MIMAT0005837 mmu-miR-1187 71991 Ercc8 aaUGUGU-GUAUGUGUGU-GUGUAu | ||| : |||| || ||||| ggAAACAGUUUACAGUCAUCACAUg 2 22 377 401 [mm9:13:108962919-108962943:+] 0.7145 124 0 -13.27 -0.3312 MIMAT0005841 mmu-miR-669h-5p 71991 Ercc8 cgUGAGUUGAUAUGUGGGUACGUa |||||:| | | |:||||||| aaACUCAGC-A-AAAUCCAUGCAg 2 23 2059 2080 [mm9:13:108985127-108985148:+] 0.5709 166 7 -23.36 -0.3149 MIMAT0005841 mmu-miR-669h-5p 71991 Ercc8 cgUGAGUUGAUAUGUGGGUACGUa |||||:| | | |:||||||| aaACUCAGC-A-AAAUCCAUGCAg 2 23 809 830 [mm9:13:108985127-108985148:+] 0.5709 166 7 -23.36 -0.5530 MIMAT0005857 mmu-miR-1196 71991 Ercc8 ucCGUCUCCGUCCAUCUAAa ||||:| | ||||||| auGCAGGG--AUGUAGAUUa 2 19 2075 2092 [mm9:13:108985143-108985160:+] 0.5709 155 7 -16.03 -0.8026 MIMAT0005857 mmu-miR-1196 71991 Ercc8 ucCGUCUCCGUCCAUCUAAa ||||:| | ||||||| auGCAGGG--AUGUAGAUUa 2 19 825 842 [mm9:13:108985143-108985160:+] 0.5709 155 7 -16.03 -1.0439 MIMAT0005859 mmu-miR-1198 71991 Ercc8 gguuCGGUCGGUCCUUGUGUAu |: :| :| ||||||| aaguGUGGGAUACAAACACAUu 2 19 328 349 [mm9:13:108959660-108959681:+] 0.7281 146 7 -11.14 -0.4145 MIMAT0005860 mmu-miR-1199 71991 Ercc8 ggcgcgcuggcccUGAGUCu |||||| auguuagaaugaaACUCAGa 2 8 414 433 [mm9:13:108964721-108964740:+] 0.5168 120 6 -15.19 -0.1057 MIMAT0007866 mmu-miR-1905 71991 Ercc8 gauggcgcACCACCCUGACCAc || | ||||||| uuuguaaaUGACGUGACUGGUg 2 15 39 60 [mm9:13:108964346-108964367:+] 0.6521 146 7 -17.75 -0.5846 MIMAT0007868 mmu-miR-1903 71991 Ercc8 acagaguccUUCUUCUUCUUCc |: ||||||||| --aguguuuAGUAAGAAGAAGc 2 14 1 20 [mm9:13:108964308-108964327:+] 0.5883 153 7 -16.81 -0.2593 MIMAT0007869 mmu-miR-1899 71991 Ercc8 ccuucgucuaagccGGUAGCGa ||||||| uccccacggcagcaCCAUCGCu 2 9 986 1007 [mm9:13:108974005-108974026:+] 0.7420 140 7 -18.71 -0.2723 MIMAT0007875 mmu-miR-1898 71991 Ercc8 cuaggGGAC-ACUUGGAACUGGa |:|| | | :||||||| ggaugCUUGCUUACUCUUGACCa 2 18 717 739 [mm9:13:108967854-108967876:+] 0.7529 152 7 -17.66 -0.7986 MIMAT0009396 mmu-miR-1933-5p 71991 Ercc8 uuugauucUGGCUUGUGGUACUGa ||| ||:||||||| uccuggucACC--ACGCCAUGACu 2 17 531 552 [mm9:13:108965774-108965795:+] 0.6548 153 7 -22.98 -0.2304 MIMAT0009400 mmu-miR-1936 71991 Ercc8 cggucaaGUGUCGUCCAGUCAAu | | || ||||||| uuguaaaCUCUUCA-GUCAGUUu 2 17 1518 1539 [mm9:13:108984586-108984607:+] 0.4822 142 7 -11.38 -0.4636 MIMAT0009400 mmu-miR-1936 71991 Ercc8 cggucaaGUGUCGUCCAGUCAAu | | || ||||||| uuguaaaCUCUUCA-GUCAGUUu 2 17 268 289 [mm9:13:108984586-108984607:+] 0.4822 142 7 -11.38 -0.7431 MIMAT0009402 mmu-miR-1938 71991 Ercc8 cuGGCUUGAUGUUCAGGGUGGc || : ||:| ||||||| ugCCAGCCUGCCCUUCCCACCu 2 21 1802 1823 [mm9:13:108984870-108984891:+] 0.5492 152 7 -18.75 -0.1621 MIMAT0009402 mmu-miR-1938 71991 Ercc8 cuGGCUUGAUGUUCAGGGUGGc || : ||:| ||||||| ugCCAGCCUGCCCUUCCCACCu 2 21 552 573 [mm9:13:108984870-108984891:+] 0.5492 152 7 -18.75 -0.3196 MIMAT0009409 mmu-miR-1944 71991 Ercc8 uuagucuUGAACUGUAAGUCGUGUCUc :|| |||| :||||||| uucaccuGCUCACCAUU-GGCACAGAc 2 21 829 854 [mm9:13:108968820-108968845:+] 0.6277 154 7 -16.38 -0.1501 MIMAT0009426 mmu-miR-1955 71991 Ercc8 uuUUCGAC-GUCACGUAGGACCCUGa :| :|| :| | | ||||||| caGACUUGUUAUUCCCAGCUGGGACc 2 24 1708 1733 [mm9:13:108984776-108984801:+] 0.5350 146 7 -16.23 -0.1570 MIMAT0009426 mmu-miR-1955 71991 Ercc8 uuUUCGAC-GUCACGUAGGACCCUGa :| :|| :| | | ||||||| caGACUUGUUAUUCCCAGCUGGGACc 2 24 458 483 [mm9:13:108984776-108984801:+] 0.5350 146 7 -16.23 -0.3109 MIMAT0009428 mmu-miR-1956 71991 Ercc8 agGCGACUGAGUCGGGACCUGa | |||:|| || ||||||| aaCCCUGGCU-AG-CCUGGACu 2 21 116 135 [mm9:13:108984434-108984453:+] 0.4957 160 7 -29.76 -0.1049 MIMAT0009433 mmu-miR-1960 71991 Ercc8 ucGGGAGAAGAUUG-UCGUGACc || | | | | ||||||| ccCCAGCAGCCACCAAGCACUGu 2 21 403 425 [mm9:13:108962945-108962967:+] 0.7145 143 7 -15.33 -0.2588 MIMAT0009438 mmu-miR-1965 71991 Ercc8 acGCGGUGAUGCC---GGGCCGAa :|| :|| ||| ||||||| aaUGCAGCU-CGGAGCCCCGGCUg 2 20 202 224 [mm9:13:108964509-108964531:+] 0.5225 148 7 -25.13 -0.1606 MIMAT0009455 mmu-miR-1983 71991 Ercc8 ucuUUUGUACGAGGUC-CACUc | :||| :| ||| |||| cucAUGCAUCUUGCAGUGUGAa 2 19 1955 1976 [mm9:13:108985023-108985044:+] 0.5354 122 0 -14.06 -0.1493 MIMAT0009455 mmu-miR-1983 71991 Ercc8 ucuUUUGUACGAGGUC-CACUc | :||| :| ||| |||| cucAUGCAUCUUGCAGUGUGAa 2 19 705 726 [mm9:13:108985023-108985044:+] 0.5354 122 0 -14.06 -0.2974 MIMAT0011210 mmu-miR-2134 71991 Ercc8 cguggggcaaaGGGUUCUg ||||||| uacgggcacagCCCAAGAa 2 9 439 457 [mm9:13:108984757-108984775:+] 0.5511 140 7 -17.01 -0.1027 MIMAT0011221 mmu-miR-2145 71991 Ercc8 uugguccgggcUGGGACga |||||| auguguaugauACCCUGaa 3 9 346 364 [mm9:13:108984664-108984682:+] 0.5683 120 0 -10.96 -0.1587 MIMAT0011222 mmu-miR-2146 71991 Ercc8 guguACCUUGGG-AAGAG-GUg |||| ||: ||||| || agucUGGAUCCUGUUCUCACAu 2 17 475 496 [mm9:13:108964225-108964246:+] 0.7040 123 0 -17.24 -0.4039 MIMAT0012771 mmu-miR-432 71991 Ercc8 gacGGGUGACUAGAUG-AGGUUCu ||: | || |:| |||||| ggaCCUUCAUAUGUGCAUCCAAGg 2 21 479 502 [mm9:13:108984797-108984820:+] 0.5421 124 6 -17.23 -0.1468 MIMAT0015645 mmu-miR-3473 71991 Ercc8 ccgaCUCGGUAG-AGAGGu ||||| || ||||| aaucGAGCC-UCUUCUCCc 2 15 1918 1935 [mm9:13:108984986-108985003:+] 0.5492 120 0 -19.20 -0.3226 MIMAT0015645 mmu-miR-3473 71991 Ercc8 ccgaCUCGGUAG-AGAGGu ||||| || ||||| aaucGAGCC-UCUUCUCCc 2 15 668 685 [mm9:13:108984986-108985003:+] 0.5492 120 0 -19.20 -0.5633 MIMAT0004528 mmu-miR-125a-3p 71991 Ercc8 ccgagggUUCUUGGAGUGGACa | |: |:||||||| acaagugACGGCCUUCACCUGc 2 16 816 837 [mm9:13:108968807-108968828:+] 0.6277 151 7 -19.64 -0.1805 MIMAT0000144 mmu-miR-132 71991 Ercc8 gcUGGUACCG-ACAUCUGACAAu | :| || || |||||||| caAAUACAGCGUGGAGACUGUUc 2 21 248 270 [mm9:13:108959580-108959602:+] 0.7281 155 7 -17.33 -0.2983 MIMAT0000144 mmu-miR-132 71991 Ercc8 gcugguaccgacaucUGACAAu |||||| guaaucacuucauuaACUGUUa 2 8 359 380 [mm9:13:108964666-108964687:+] 0.5201 120 6 -8.69 -0.1446 MIMAT0000147 mmu-miR-135a 71991 Ercc8 aguguaUCCUUAUUUUUCGGUAu ||||| | |||||||| cguugaAGGAAGAUAAAGCCAUc 2 18 215 237 [mm9:13:108950910-108950924,108959562-108959569:+] 0.7087 169 7 -17.58 -0.3692 MIMAT0000153 mmu-miR-141 71991 Ercc8 gguagaaAUGGU-CUGUCACAAu | ||| ||||||||| aucagacUUCCACGACAGUGUUg 2 16 1274 1296 [mm9:13:108984342-108984364:+] 0.5765 158 7 -22.28 -0.1464 MIMAT0000153 mmu-miR-141 71991 Ercc8 gguagaaAUGGU-CUGUCACAAu | ||| ||||||||| aucagacUUCCACGACAGUGUUg 2 16 24 46 [mm9:13:108984342-108984364:+] 0.5765 158 7 -22.28 -0.2977 MIMAT0000159 mmu-miR-149 71991 Ercc8 cccucacuucugugcCUCGGUCu ||||||| guaccaccuuccuauGAGCCAGu 2 9 1140 1162 [mm9:13:108977433-108977455:+] 0.6727 140 7 -14.49 -0.6367 MIMAT0000159 mmu-miR-149 71991 Ercc8 cccUCACUUCUGU--GCCUCG-GUCu ||||| :|| ||||| ||| agcAGUGACUGCAAGGGGAGCUCAGa 2 21 150 175 [mm9:13:108964457-108964482:+] 0.5254 123 0 -22.73 -0.1577 MIMAT0000162 mmu-miR-152 71991 Ercc8 gguUCAAGACAGUAC-GUGACu :|| : ||||| ||||| aguGGUAUCCUCAUGACACUGg 2 19 271 292 [mm9:13:108959603-108959624:+] 0.7281 122 0 -15.37 -0.5615 MIMAT0000208 mmu-miR-10b 71991 Ercc8 guguuuaagccAAGAUGUCCCAu ||||||||||| cuguucucacaUUCUACAGGGUc 2 13 485 507 [mm9:13:108964235-108964254,108965748-108965750:+] 0.6294 160 7 -20.88 -0.2667 MIMAT0000210 mmu-miR-181a 71991 Ercc8 ugAGUGGCUGUCGCAACUUACAa || || || : |||||||| cuUCUCCCUCA-UAUUGAAUGUu 2 22 1928 1949 [mm9:13:108984996-108985017:+] 0.5492 155 7 -15.86 -0.5326 MIMAT0000210 mmu-miR-181a 71991 Ercc8 ugAGUGGCUGUCGCAACUUACAa || || || : |||||||| cuUCUCCCUCA-UAUUGAAUGUu 2 22 678 699 [mm9:13:108984996-108985017:+] 0.5492 155 7 -15.86 -0.8088 MIMAT0000212 mmu-miR-183 71991 Ercc8 ucacuuaagauggucACGGUAu |||||| agauuaaacaugaaaUGCCAU- 2 8 837 857 [mm9:13:108985155-108985175:+] 0.5709 120 6 -7.51 -0.1042 MIMAT0000219 mmu-miR-24 71991 Ercc8 gacaagGACGACUUGACUCGGu || || |||||||| cagaagCU-CUCCACUGAGCCu 2 17 636 656 [mm9:13:108966063-108966083:+] 0.5007 150 7 -17.36 -0.1105 MIMAT0000229 mmu-miR-199a-5p 71991 Ercc8 cuuguCCAUCAGACU--UGUGACCc |||| || | ||||||| ucaguGGUAUCCUCAUGACACUGGc 2 19 269 293 [mm9:13:108959601-108959625:+] 0.7281 153 7 -17.55 -0.3166 MIMAT0000247 mmu-miR-143 71991 Ercc8 cucGAUGUCACGAAGUAGAgu | ::| |||||||||| uauCCGUAUUGCUUCAUCUaa 3 19 379 399 [mm9:13:108964686-108964706:+] 0.5201 146 0 -15.94 -0.1016 MIMAT0000379 mmu-miR-301a 71991 Ercc8 cgaaaCUGUUAUGAUA-ACGUGAc ||||:|::|:| |||||| uccacGACAGUGUUGUGUGCACUu 2 19 1282 1305 [mm9:13:108984350-108984373:+] 0.5383 138 6 -19.94 -0.1228 MIMAT0000379 mmu-miR-301a 71991 Ercc8 cgaaaCUGUUAUGAUA-ACGUGAc ||||:|::|:| |||||| uccacGACAGUGUUGUGUGCACUu 2 19 32 55 [mm9:13:108984350-108984373:+] 0.5383 138 6 -19.94 -0.2548 MIMAT0000519 mmu-miR-200a 71991 Ercc8 uguagcaAUGGU-CUGUCACAAu | ||| ||||||||| aucagacUUCCACGACAGUGUUg 2 16 1274 1296 [mm9:13:108984342-108984364:+] 0.5765 158 7 -20.88 -0.1464 MIMAT0000519 mmu-miR-200a 71991 Ercc8 uguagcaAUGGU-CUGUCACAAu | ||| ||||||||| aucagacUUCCACGACAGUGUUg 2 16 24 46 [mm9:13:108984342-108984364:+] 0.5765 158 7 -20.88 -0.2977 MIMAT0000520 mmu-miR-208a 71991 Ercc8 uguUCGAAAAACGAG-CAGAAUa ||| || ||| |||||| ggcAGC-UUACACUCAGUCUUAa 2 20 2025 2046 [mm9:13:108985093-108985114:+] 0.5709 121 6 -15.08 -0.5959 MIMAT0000520 mmu-miR-208a 71991 Ercc8 uguUCGAAAAACGAG-CAGAAUa ||| || ||| |||||| ggcAGC-UUACACUCAGUCUUAa 2 20 775 796 [mm9:13:108985093-108985114:+] 0.5709 121 6 -15.08 -0.8707 MIMAT0000530 mmu-miR-21 71991 Ercc8 agUUGUAGUCAGACUAUU-CGAu |||| ::| | |||| ||| gcAACAGUGGCAUCAUAAUGCUa 2 21 1864 1886 [mm9:13:108984932-108984954:+] 0.5492 124 0 -12.79 -0.6188 MIMAT0000530 mmu-miR-21 71991 Ercc8 agUUGUAGUCAGACUAUU-CGAu |||| ::| | |||| ||| gcAACAGUGGCAUCAUAAUGCUa 2 21 614 636 [mm9:13:108984932-108984954:+] 0.5492 124 0 -12.79 -0.8920 MIMAT0000531 mmu-miR-22 71991 Ercc8 ugucaagaAGU-UGACCGUCGAa ||| |||||||||| gacucggcUCACACUGGCAGCUa 2 15 1409 1431 [mm9:13:108984477-108984499:+] 0.4935 161 7 -21.91 -0.2421 MIMAT0000531 mmu-miR-22 71991 Ercc8 ugUCAAGA-AGUUGACCGUCGAa | | || |||: ||||||| guAUUGCUCUCAGAGGGCAGCUu 2 21 2010 2032 [mm9:13:108985078-108985100:+] 0.5531 155 7 -21.37 -0.3205 MIMAT0000531 mmu-miR-22 71991 Ercc8 ugucaagaAGU-UGACCGUCGAa ||| |||||||||| gacucggcUCACACUGGCAGCUa 2 15 159 181 [mm9:13:108984477-108984499:+] 0.4935 161 7 -21.91 -0.4604 MIMAT0000531 mmu-miR-22 71991 Ercc8 ugUCAAGA-AGUUGACCGUCGAa | | || |||: ||||||| guAUUGCUCUCAGAGGGCAGCUu 2 21 760 782 [mm9:13:108985078-108985100:+] 0.5531 155 7 -21.37 -0.5605 MIMAT0000567 mmu-miR-329 71991 Ercc8 uuUUUCCAAUCGACCCACACAa :|| |:| ||||||| guGAACUAUGGGAAGGUGUGUa 2 21 900 921 [mm9:13:108973919-108973940:+] 0.7420 144 7 -11.52 -0.8525 MIMAT0000584 mmu-miR-339-5p 71991 Ercc8 gcaCUCGAGGACCUCCUGUCCCu |||:| | ||||||| cugGAGUUAAACAAAGACAGGGa 2 21 144 166 [mm9:13:108950839-108950861:+] 0.6860 148 7 -22.87 -0.9514 MIMAT0000584 mmu-miR-339-5p 71991 Ercc8 gcACUCGAGGACCUCCU-GUCCCu || ||:| | | || ||||| ugUGCACUUCAGCACGAGCAGGGu 2 22 47 70 [mm9:13:108984365-108984388:+] 0.5241 125 0 -17.91 -0.1231 MIMAT0000612 mmu-miR-135b 71991 Ercc8 aguguaUCCUUACU-UUUCGGUAu ||||| || |||||||| cguugaAGGAA-GAUAAAGCCAUc 2 18 215 237 [mm9:13:108950910-108950924,108959562-108959569:+] 0.7087 162 7 -17.58 -0.3692 MIMAT0000648 mmu-miR-10a 71991 Ercc8 guguuuaagccuAGAUGUCCCAu |||||||||| cuguucucacauUCUACAGGGUc 2 12 485 507 [mm9:13:108964235-108964254,108965748-108965750:+] 0.6294 155 7 -20.05 -0.2644 MIMAT0000654 mmu-miR-32 71991 Ercc8 acGUUGAAUCAUUACACGU-UAu |||| || || ||||| || ggCAAC--AGCAAGGUGCACAUg 2 21 560 580 [mm9:13:108965803-108965814,108965999-108966007:+] 0.5777 125 0 -13.55 -0.2239 MIMAT0000659 mmu-miR-212 71991 Ercc8 accggcacugACCUCUGACAAu ||||||||||| aaauacagcgUGGAGACUGUUc 2 13 249 270 [mm9:13:108959581-108959602:+] 0.7281 160 7 -19.41 -0.3034 MIMAT0000659 mmu-miR-212 71991 Ercc8 accggcacugaccucUGACAAu |||||| guaaucacuucauuaACUGUUa 2 8 359 380 [mm9:13:108964666-108964687:+] 0.5201 120 6 -8.49 -0.1432 MIMAT0000671 mmu-miR-224 71991 Ercc8 uugCCUUGGUG-AUCACUGAAu || || || | ||||||| caaGGUACAACUUUGUGACUUa 2 19 452 473 [mm9:13:108964202-108964223:+] 0.7040 157 7 -17.51 -1.0889 MIMAT0000673 mmu-miR-181b 71991 Ercc8 ugGGUGGCUGUCGUUACUUACAa :| || || :| ||||||| cuUCUCCCUCA-UAUUGAAUGUu 2 22 1928 1949 [mm9:13:108984996-108985017:+] 0.5492 151 7 -14.54 -0.5326 MIMAT0000673 mmu-miR-181b 71991 Ercc8 ugGGUGGCUGUCGUUACUUACAa :| || || :| ||||||| cuUCUCCCUCA-UAUUGAAUGUu 2 22 678 699 [mm9:13:108984996-108985017:+] 0.5492 151 7 -14.54 -0.8088 MIMAT0000674 mmu-miR-181c 71991 Ercc8 ugAGUGGCUGUCCAACUUACAa || || || |||||||| cuUCUCCCUCAUAUUGAAUGUu 2 21 1928 1949 [mm9:13:108984996-108985017:+] 0.5492 160 7 -17.01 -0.5291 MIMAT0000674 mmu-miR-181c 71991 Ercc8 ugAGUGGCUGUCCAACUUACAa || || || |||||||| cuUCUCCCUCAUAUUGAAUGUu 2 21 678 699 [mm9:13:108984996-108985017:+] 0.5492 160 7 -17.01 -0.8052 MIMAT0000704 mmu-miR-361 71991 Ercc8 cauggGGACCUCUAAGAC-UAUu |||||| | |||| ||| acuagCCUGGA-ACUCUGUAUAg 2 18 133 154 [mm9:13:108984451-108984472:+] 0.4946 127 0 -17.78 -0.1319 MIMAT0004684 mmu-miR-362-3p 71991 Ercc8 acUUAGGAACUUGUCCACACAa :| |: ||:: |||||||| guGAACUAUGGGAAGGUGUGUa 2 21 900 921 [mm9:13:108973919-108973940:+] 0.7420 160 7 -21.00 -0.8490 MIMAT0000741 mmu-miR-377 71991 Ercc8 uguuuucaACGGAAACACACUa | | | ||||||| cccuccugUACAUGUGUGUGAu 2 15 1481 1502 [mm9:13:108984549-108984570:+] 0.4911 146 7 -13.69 -0.1401 MIMAT0000741 mmu-miR-377 71991 Ercc8 uguuuucaACGGAAACACACUa | | | ||||||| cccuccugUACAUGUGUGUGAu 2 15 231 252 [mm9:13:108984549-108984570:+] 0.4911 146 7 -13.69 -0.2876 MIMAT0000747 mmu-miR-382 71991 Ercc8 gcUUAGGUGGUGCUUGUUGAAg :| ||| | | ||||||| agGACCCA--AGGUACAACUUu 2 21 446 465 [mm9:13:108964196-108964215:+] 0.7040 149 7 -13.94 -0.3887 MIMAT0000747 mmu-miR-382 71991 Ercc8 gcuuagguGGUGCUUGU-UGAAg ||| ||||| |||| ggcacagcCCAAGAACAGACUUg 2 15 1693 1715 [mm9:13:108984761-108984783:+] 0.5350 126 0 -11.95 -0.3174 MIMAT0000747 mmu-miR-382 71991 Ercc8 gcuuagguGGUGCUUGU-UGAAg ||| ||||| |||| ggcacagcCCAAGAACAGACUUg 2 15 443 465 [mm9:13:108984761-108984783:+] 0.5350 126 0 -11.95 -0.5563 MIMAT0001092 mmu-miR-376b 71991 Ercc8 uuCACCUACAAGGAGAUACUa || || |::||||||| cuGUUGAGACUUUUCUAUGAg 2 20 131 151 [mm9:13:108964438-108964458:+] 0.5565 155 7 -12.15 -0.4125 MIMAT0001095 mmu-miR-370 71991 Ercc8 uggucCAAGGUGGGGUCGUCCg || : |: ||||||| aagguGUGUAAUGACAGCAGGa 2 18 912 933 [mm9:13:108973931-108973952:+] 0.7420 145 7 -20.32 -0.8850 MIMAT0003168 mmu-miR-543 71991 Ercc8 uucuucacGUGGCGCUUACAAa ||: :||||||| uucucccuCAUAUUGAAUGUUa 2 15 1929 1950 [mm9:13:108984997-108985018:+] 0.5423 146 7 -10.20 -0.7283 MIMAT0003168 mmu-miR-543 71991 Ercc8 uucuucacGUGGCGCUUACAAa ||: :||||||| uucucccuCAUAUUGAAUGUUa 2 15 679 700 [mm9:13:108984997-108985018:+] 0.5423 146 7 -10.20 -0.9862 MIMAT0004186 mmu-miR-301b 71991 Ercc8 cgaaaCUGUUAUGGUA-ACGUGAc ||||:|::::| |||||| uccacGACAGUGUUGUGUGCACUu 2 19 1282 1305 [mm9:13:108984350-108984373:+] 0.5383 134 6 -18.33 -0.1228 MIMAT0004186 mmu-miR-301b 71991 Ercc8 cgaaaCUGUUAUGGUA-ACGUGAc ||||:|::::| |||||| uccacGACAGUGUUGUGUGCACUu 2 19 32 55 [mm9:13:108984350-108984373:+] 0.5383 134 6 -18.33 -0.2548 MIMAT0003889 mmu-miR-758 71991 Ercc8 aucaCCUGGUCCAGUGUUu ||| | ||||||| aaugGGAAAAAGUCACAAg 2 16 744 762 [mm9:13:108967881-108967899:+] 0.6825 151 7 -15.65 -0.4968 MIMAT0003456 mmu-miR-495 71991 Ercc8 uucUUCACGUGGU-ACAAACAAa | |||::: | |||||||| uacAUGUGUGUGAUUGUUUGUUu 2 20 1489 1511 [mm9:13:108984557-108984579:+] 0.4911 158 7 -12.72 -0.5140 MIMAT0003456 mmu-miR-495 71991 Ercc8 uucuUCACGUGGUACAAACAAa || |: :::|||||||| gcucAGAGU-UUGUGUUUGUUc 2 19 967 987 [mm9:13:108973986-108974006:+] 0.7420 152 7 -10.09 -0.2454 MIMAT0003456 mmu-miR-495 71991 Ercc8 uucUUCACGUGGU-ACAAACAAa | |||::: | |||||||| uacAUGUGUGUGAUUGUUUGUUu 2 20 239 261 [mm9:13:108984557-108984579:+] 0.4911 158 7 -12.72 -0.7986 MIMAT0003482 mmu-miR-499 71991 Ercc8 uuuguAGUGACGUUCAGAAUu |:|| : ||||||| gcagcUUACACUCAGUCUUAa 2 17 2026 2046 [mm9:13:108985094-108985114:+] 0.5709 148 7 -14.91 -0.5430 MIMAT0003482 mmu-miR-499 71991 Ercc8 uuuguAGUGACGUUCAGAAUu |:|| : ||||||| gcagcUUACACUCAGUCUUAa 2 17 776 796 [mm9:13:108985094-108985114:+] 0.5709 148 7 -14.91 -0.8193 MIMAT0003486 mmu-miR-491 71991 Ercc8 ggaguaccuuccCAAGGGGUGa ||||||||| gaguuuguguuuGUUCCCCACg 2 11 972 993 [mm9:13:108973991-108974012:+] 0.7420 150 7 -18.53 -0.3249 MIMAT0004324 mmu-miR-181d 71991 Ercc8 ugGGUGGCUGUUGUUACUUACAa :| || | |:| ||||||| cuUCUCCCUC-AUAUUGAAUGUu 2 22 1928 1949 [mm9:13:108984996-108985017:+] 0.5492 151 7 -14.74 -0.5326 MIMAT0004324 mmu-miR-181d 71991 Ercc8 ugGGUGGCUGUUGUUACUUACAa :| || | |:| ||||||| cuUCUCCCUC-AUAUUGAAUGUu 2 22 678 699 [mm9:13:108984996-108985017:+] 0.5492 151 7 -14.74 -0.8088 MIMAT0004847 mmu-miR-882 71991 Ercc8 ugAUUACGCGAUUGAG-AGAGGa ||: | | |:||| ||||| gcUAGCGAGGAAGCUCUUCUCCu 2 21 279 301 [mm9:13:108964586-108964608:+] 0.5169 124 0 -21.30 -0.1587 MIMAT0004869 mmu-miR-421 71991 Ercc8 cgcGGGUUAAUU--AC-AGACAACUa :|: :| || || ||||||| uauUCUUGUAAAACUGCGCUGUUGAg 2 21 113 138 [mm9:13:108964420-108964445:+] 0.5852 142 7 -11.49 -0.4426 MIMAT0004889 mmu-miR-504 71991 Ercc8 cuaucucacgucugGUCCCAGa ||||||| guucucacauucuaCAGGGUCa 2 9 487 508 [mm9:13:108964237-108964254,108965748-108965751:+] 0.6294 140 7 -13.55 -0.6561 MIMAT0004896 mmu-miR-590-3p 71991 Ercc8 ugaucgaAUAUGUAUUUUAAu || | :||||||| cugacagUAGA-GUAAAAUUa 2 15 676 695 [mm9:13:108967813-108967832:+] 0.7529 144 7 -6.09 -0.7360 MIMAT0004936 mmu-miR-873 71991 Ercc8 uccucugagUGUUCAAGGACg :| |||||||| uuccuaugaGCCAGUUCCUGa 2 13 1148 1168 [mm9:13:108977441-108977461:+] 0.6727 148 7 -14.56 -0.7608 MIMAT0005850 mmu-miR-1192 71991 Ercc8 uuaaAC-CAGACAAACAAACAAa || || || ||||||||| uacaUGUGUGUGAUUGUUUGUUu 2 19 1489 1511 [mm9:13:108984557-108984579:+] 0.4911 165 7 -15.87 -0.5070 MIMAT0005850 mmu-miR-1192 71991 Ercc8 uuaaacCAGACAAACAAACAAa ||:|| |||||||| cucagaGUUUG--UGUUUGUUc 2 17 968 987 [mm9:13:108973987-108974006:+] 0.7420 153 7 -12.06 -0.2368 MIMAT0005850 mmu-miR-1192 71991 Ercc8 uuaaAC-CAGACAAACAAACAAa || || || ||||||||| uacaUGUGUGUGAUUGUUUGUUu 2 19 239 261 [mm9:13:108984557-108984579:+] 0.4911 165 7 -15.87 -0.7913

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G059176 Ercc8 Mus musculus 71991

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Ercc8 mmu-miR-199a-5p beg:161 end:174 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& .| || ||||||| &5' --------GG-CTC-ACACTGG- 3' Ercc8 mmu-miR-26bstar beg:445 end:461 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& |||| ||||||| &5' -AGCCCA-------AGAACAG- 3' Ercc8 mmu-miR-710 beg:447 end:466 pic:3' GAGTTGAGAGGGGT-----TCTGAACC 5'& |||| ||||||| &5' ----------CCCAAGAACAGACTTG- 3' Ercc8 mmu-miR-18astar beg:762 end:780 pic:3' GTCTTCCTCGTGAA--TCCCGTCA 5'& || || ||||||| &5' --------GCTCTCAGAGGGCAG- 3' Ercc8 mmu-miR-499 beg:781 end:797 pic:3' TTTGTAGTGACGTTCAGAATT 5'& |||| | |||||||| &5' ------CACT-C-AGTCTTAA 3' Ercc8 mcmv-miR-M95-1-5p beg:25 end:40 pic:3' GTTCGCTGTGTTCGGGTGCTGG 5'& ||| .||||||| &5' -----GACT----TCCACGAC- 3' Ercc8 mmu-miR-3099 beg:115 end:142 pic:3' AGGGGTTGGAGAGA---GATCGGAT 5'& ||| .|. || |||||||. &5' -CCCTGGCTAGCCTGGACTAGCCTG 3' Ercc8 mmu-miR-493 beg:470 end:488 pic:3' GGACCGTGTGTC-ATCCTGGAAGT 5'& ||| |.||||||||| &5' ---------CAGCTGGGACCTTCA 3' Ercc8 mmu-miR-337-3p beg:490 end:510 pic:3' TCCGTAGTATATCCTCGACTT 5'& ||||| |||||||||| &5' --GCATCCA--AGGAGCTGAA 3' Ercc8 mmu-miR-423-5p beg:222 end:236 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||. ||||||| &5' -------CGTG----GCCCCTC- 3' Ercc8 mmu-miR-22 beg:164 end:181 pic:3' TGTCAAGAAGT-TGACCGTCGAA 5'& ||| |||||||||| &5' --------TCACACTGGCAGCT- 3' Ercc8 mmu-miR-22 beg:764 end:783 pic:3' TGTCAAGAAGTTGACCGTCGAA 5'& || |||. |||||||| &5' -----TC-TCAGAGGGCAGCTT 3' Ercc8 mmu-miR-1196 beg:824 end:842 pic:3' TCCGTCTCCGTCCATCTAAA 5'& |||| || ||||||| &5' --GCAG-GGAT-GTAGATT- 3' Ercc8 mmu-miR-485star beg:499 end:518 pic:3' CTCTCCTCTCGGCA--CATACTGA 5'& .||||.| ||||||| &5' ------GGAGCTGAAAGTATGAC- 3' Ercc8 mmu-miR-154star beg:340 end:357 pic:3' TTATCCAGTTGGCACATACTAA 5'& ||.| .||||||||| &5' ------TCGA-TGTGTATGAT- 3' Ercc8 mmu-miR-467f beg:203 end:222 pic:3' ACATCCACACACACACATATA 5'& |.|| ||||||| &5' --TGGGGTTAGAGGTGTATA- 3' Ercc8 mmu-miR-1192 beg:243 end:262 pic:3' TTAAAC-CAGACAAACAAACAAA 5'& | || || |||||||||| &5' -----GTGTGTGATTGTTTGTTT 3' Ercc8 mcmv-miR-m01-1 beg:390 end:407 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& || ||||||. &5' ------GAACTTG-TCTCCTT- 3' Ercc8 mcmv-miR-M87-1 beg:543 end:564 pic:3' CGACGGCGACGGCTGCCGACGGA 5'& ||| .|||||| .| ||||| &5' -CTG-TGCTGCCAGC--CTGCC- 3' Ercc8 mghv-miR-M1-6 beg:269 end:291 pic:3' TTTTGGTGGAGTGTGTCAAAGT 5'& ||||. |.||| ||||||. &5' -AAACT-CTTCAGTCAGTTTT- 3' Ercc8 mmu-let-7d beg:169 end:192 pic:3' TTGATACGTTGGAT-GATGGAGA 5'& |||. |||.|. ||.||||| &5' -ACTG-GCAGCTATTCTGCCTCT 3' Ercc8 mmu-let-7f beg:172 end:191 pic:3' TTGATATGTTAGAT--GATGGAGT 5'& .||. ||| ||.|||| &5' ------GCAG-CTATTCTGCCTC- 3' Ercc8 mmu-let-7g beg:172 end:191 pic:3' TTGACATGTTTGAT--GATGGAGT 5'& .| |.||| ||.|||| &5' ------GC-AGCTATTCTGCCTC- 3' Ercc8 mmu-let-7gstar beg:134 end:154 pic:3' CGTTCCGTCACC---GGACATGTCA 5'& || ||| .|||||.|| &5' -----GCC-TGGAACTCTGTATAG- 3' Ercc8 mmu-let-7i beg:171 end:191 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& ..|||| |.| ||.|||| &5' GGCAGCT---ATT-CTGCCTC- 3' Ercc8 mmu-miR-106b beg:43 end:62 pic:3' TAGACGTGACAGTCGTGAAAT 5'& .| |||||| ||||||| &5' GTGTGCACT-TCAGCAC---- 3' Ercc8 mmu-miR-106bstar beg:707 end:725 pic:3' CGTCGTTCATGGGTGTCACGCC 5'& ||| |. |||||.| &5' ---GCAT---CTTGCAGTGTG- 3' Ercc8 mmu-miR-10a beg:56 end:71 pic:3' GTGTTTAAGCCTAGATGTCCCAT 5'& |||.| .|||||| &5' CACGA----------GCAGGGT- 3' Ercc8 mmu-miR-10b beg:56 end:71 pic:3' GTGTTTAAGCCAAGATGTCCCAT 5'& |||.| .|||||| &5' CACGA----------GCAGGGT- 3' Ercc8 mmu-miR-1188 beg:772 end:788 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& ||| ||.||||. &5' ----GGCAG---CTTACACT- 3' Ercc8 mmu-miR-1188 beg:543 end:564 pic:3' AGGAC-CG--GGTTGGAGTGTGGT 5'& ||| || |||.||| .| || &5' --CTGTGCTGCCAGCCT-GC-CC- 3' Ercc8 mmu-miR-141 beg:23 end:47 pic:3' GGTAGAAATGGT-CTGTCACAAT 5'& || ||| |||||||||. &5' -CAGACTT-CCACGACAGTGTTG 3' Ercc8 mmu-miR-145star beg:504 end:525 pic:3' GTTCTTGTCATAAA-GGTCCTTA 5'& ||| ||||| ||||||| &5' ---GAA-AGTATGACCCAGGAA- 3' Ercc8 mmu-miR-146a beg:270 end:293 pic:3' TTGGGTACCTTAAGTCAAGAGT 5'& |||.| ||||||.|.| &5' AACTCTTCAG--TCAGTTTTTA 3' Ercc8 mmu-miR-146b beg:280 end:293 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& ||||||.|.| &5' ------------TCAGTTTTTA 3' Ercc8 mmu-miR-148astar beg:377 end:399 pic:3' TCAGCCTCACAG--AGTCTTGAAA 5'& |||| ||||||||| &5' --TCGGTTAATTAATCAGAACTT- 3' Ercc8 mmu-miR-150star beg:187 end:213 pic:3' GATAGGGGGTCCG-GACA-TGGTC 5'& ||. |.||||||. ||| . || &5' CTG-CTCCCAGGTGCTGGGGTTAG 3' Ercc8 mmu-miR-181a beg:676 end:700 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& .|| || || ||||||||| &5' -TTCTCCCTCATA-TTGAATGTT 3' Ercc8 mmu-miR-181b beg:677 end:700 pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& ..| || || .| |||||||| &5' -TTCTCCCTCA-TATTGAATGTT 3' Ercc8 mmu-miR-181c beg:677 end:700 pic:3' TGAGTGGCTGTCCAACTTACAA 5'& .|| || || ||||||||| &5' -TTCTCCCTCATATTGAATGTT 3' Ercc8 mmu-miR-181d beg:677 end:700 pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& ..| || | |.| |||||||| &5' -TTCTCCCTC-ATATTGAATGTT 3' Ercc8 mmu-miR-1839-5p beg:169 end:190 pic:3' GTTCTGGACAA--GAT-AGATGGAA 5'& ||| ||| |||.||| &5' ------CTGGCAGCTATTCTGCCT- 3' Ercc8 mmu-miR-188-3p beg:813 end:834 pic:3' ACG-TTTGGG-ACGTACACCCTC 5'& || |||.|| |||| |||| &5' -GCAAAATCCATGCA---GGGA- 3' Ercc8 mmu-miR-18a beg:698 end:717 pic:3' GATAGAC-GTGATCTACGTGGAAT 5'& | |||| |||||.|||. &5' ------GCCACTC-ATGCATCTTG 3' Ercc8 mmu-miR-18b beg:696 end:717 pic:3' GATTGTC-GTGATCTACGTGGAAT 5'& .|| |||| |||||.|||. &5' ----TAGCCACTC-ATGCATCTTG 3' Ercc8 mmu-miR-1902 beg:698 end:717 pic:3' TTCAGTACGGATG--ACGTGGAGA 5'& ||| ||||.||. &5' -------GCCACTCATGCATCTT- 3' Ercc8 mmu-miR-1929 beg:124 end:145 pic:3' GAGACGAGATATT-TCAGGATCTT 5'& || ||. || |||.||| &5' ----GC-CTGGACTAG-CCTGGAA 3' Ercc8 mmu-miR-1935 beg:175 end:195 pic:3' TCTCTAGGCGGT----CGGAGACGGA 5'& ||.| ||||||||. &5' --------GCTATTCTGCCTCTGCT- 3' Ercc8 mmu-miR-1937a beg:189 end:211 pic:3' ACCCCCGAG----CA-GGCCCTAA 5'& |||| || |.|||.|| &5' -----GCTCCCAGGTGCTGGGGTT 3' Ercc8 mmu-miR-1937a beg:305 end:317 pic:3' ACCCCCGAGCAGGCCCTAA 5'& ||..||||| &5' ---------GTTTGGGAT- 3' Ercc8 mmu-miR-1938 beg:551 end:573 pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& .|| ||.| ||||||| &5' -GCCAGCCTGCCCTTCCCACC- 3' Ercc8 mmu-miR-1950 beg:820 end:840 pic:3' ACTGGTATAGGAATCTACGTCT 5'& ||||. | .||||.||| &5' ---CCATG-CAG-GGATGTAGA 3' Ercc8 mmu-miR-1954 beg:95 end:117 pic:3' TTGTCCCAGAGTGAGACGTCA 5'& .|||| ||||||| ||.| &5' GACAGTGTCTCACGATGTA-- 3' Ercc8 mmu-miR-1956 beg:115 end:136 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& || |||.|| || |||||||| &5' -CC-CTGGCT-AG-CCTGGACT 3' Ercc8 mmu-miR-1959 beg:398 end:420 pic:3' GAGGTGACTCGATGTAGG-GG 5'& |||| .||||| .|||.| || &5' CTCC-TTGAGC-GCATTCACC 3' Ercc8 mmu-miR-1961 beg:174 end:191 pic:3' AAGATTGAT--GATGGAGT 5'& |.||| ||.|||| &5' ----AGCTATTCTGCCTC- 3' Ercc8 mmu-miR-199bstar beg:153 end:174 pic:3' CTTGTCCA--TCAGATTTGTGACCC 5'& ||.||| .| || ||||||| &5' GAGCAGACTCGG-CTC-ACACTGG- 3' Ercc8 mmu-miR-200a beg:23 end:47 pic:3' TGTAGCAAT--GGT-CTGTCACAAT 5'& ||| ||| |||||||||. &5' --ATCAGACTTCCACGACAGTGTTG 3' Ercc8 mmu-miR-208a beg:775 end:796 pic:3' TGTTCGAAAAACGAG-CAGAATA 5'& .| ||||| ||| |||||| &5' GC-AGCTTACA-CTCAGTCTTA- 3' Ercc8 mmu-miR-2135 beg:17 end:34 pic:3' CAAAGCCGGGGT-TCTGGAGA 5'& |.|| ||||.|| &5' ------GTCCATCAGACTTC- 3' Ercc8 mmu-miR-2135 beg:467 end:486 pic:3' CAAAGCCGGGGT----TCTGGAGA 5'& .|||| .|||||. &5' -------TCCCAGCTGGGACCTT- 3' Ercc8 mmu-miR-2141 beg:366 end:384 pic:3' TTGAAAAGACTGTGGAGGA 5'& ||||||||| |. .| &5' -ACTTTTCTGTCGGTT--- 3' Ercc8 mmu-miR-23a beg:710 end:726 pic:3' CCTTTAGGGACCGTTACACTA 5'& .|.| |||.||||| &5' ------TCTT-GCAGTGTGA- 3' Ercc8 mmu-miR-23b beg:710 end:726 pic:3' CCATTAGGGACCGTTACACTA 5'& .|.| |||.||||| &5' ------TCTT-GCAGTGTGA- 3' Ercc8 mmu-miR-27a beg:789 end:811 pic:3' CGCCTTGAATC--GGT--GACACTT 5'& |||| || ||||||| &5' ------CTTAATTCCTTCCTGTGAA 3' Ercc8 mmu-miR-27b beg:789 end:811 pic:3' CGTCTTGAATC--GGT--GACACTT 5'& |||| || ||||||| &5' ------CTTAATTCCTTCCTGTGAA 3' Ercc8 mmu-miR-2861 beg:543 end:566 pic:3' GGCG-GGCGG-CGGTCCGGGG 5'& |.|. |.||| ||| ||||. &5' CTGTGCTGCCAGCCT-GCCCT 3' Ercc8 mmu-miR-291b-3p beg:34 end:56 pic:3' TGTTTGTTTT-ACCTACGTGAAA 5'& .|||. || ||||||| &5' ---GACAGTGTTGTGTGCACTT- 3' Ercc8 mmu-miR-292-5p beg:299 end:315 pic:3' GTTTTCTCGGGGGTCAAACTCA 5'& .||. ||||||.| &5' --------TCCTGAGTTTGGG- 3' Ercc8 mmu-miR-293star beg:814 end:837 pic:3' GTTTTACAGTGTGTCAAACT-CA 5'& |||||| ||..||| || || &5' CAAAATC-CATGCAGG--GATGT 3' Ercc8 mmu-miR-296-3p beg:102 end:122 pic:3' CCTCTCGGAG-G-TGGGTTGGGAG 5'& |.||| | |. .|||||| &5' -----GTCTCACGATGTAACCCT- 3' Ercc8 mmu-miR-302cstar beg:134 end:158 pic:3' CGT-CCATTGGGGTACAATTTCG 5'& || || |||.|..| ||.||| &5' GCCTGG-AACTCTGTA-TAGAGC 3' Ercc8 mmu-miR-30astar beg:346 end:366 pic:3' CGACGT-TTGTAGGCTGACTTTC 5'& ||.| .|.| || |||||| &5' --TGTATGATA-CC--CTGAAA- 3' Ercc8 mmu-miR-30estar beg:346 end:366 pic:3' CGACAT-TTGTAGGCTGACTTTC 5'& |||| .|.| || |||||| &5' --TGTATGATA-CC--CTGAAA- 3' Ercc8 mmu-miR-30estar beg:491 end:512 pic:3' CGACATTTGTAGGC----TGACTTTC 5'& .||||| .||||||| &5' -------GCATCCAAGGAGCTGAAAG 3' Ercc8 mmu-miR-324-5p beg:820 end:837 pic:3' TGTGGTTACGGGATCCCCTACGC 5'& || |||| ||||||. &5' ---CC-ATGCA----GGGATGT- 3' Ercc8 mmu-miR-326 beg:765 end:776 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& |.|||||| &5' -------------CTCAGAGG 3' Ercc8 mmu-miR-338-3p beg:196 end:208 pic:3' GTTGTTTTAGTGACTACGACCT 5'& |.||||||. &5' -------------GGTGCTGGG 3' Ercc8 mmu-miR-344 beg:825 end:843 pic:3' TGTCAGTCCGAAACCGATCTAGT 5'& |||| || |||||.| &5' -----CAGGGA-TG--TAGATTA 3' Ercc8 mmu-miR-345-5p beg:189 end:213 pic:3' TTCGTGA--CC-TGATCCCCAGTCG 5'& || | || .|| |||||.|| &5' --GCTCCCAGGTGCT-GGGGTTAG- 3' Ercc8 mmu-miR-3474 beg:180 end:201 pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& || | ||| |||||||| &5' ---TCTGCCTCTGCTCCCAGG- 3' Ercc8 mmu-miR-362-5p beg:813 end:835 pic:3' TAAGTGTGGATCCAAGGTTCCTAA 5'& .|| | ||.|||| &5' ----GCAAAATCCATGCAGGGAT- 3' Ercc8 mmu-miR-375 beg:441 end:462 pic:3' AGTGCGC-TCGGCTTGCTTGTTT 5'& || |||| |||||.| &5' ----GCACAGCCCAA-GAACAGA 3' Ercc8 mmu-miR-423-5p beg:549 end:568 pic:3' TTTCAGAGCGA--GAGACGGGGAGT 5'& .|| | ||||||.|| &5' -------TGCCAGC-CTGCCCTTC- 3' Ercc8 mmu-miR-429 beg:30 end:47 pic:3' TGCCGTAATGGT-CTGTCATAAT 5'& ||| ||||||.||. &5' ---------CCACGACAGTGTTG 3' Ercc8 mmu-miR-448 beg:475 end:496 pic:3' TACCCTGTAGGATGTATACGTT 5'& |||||| |.| |.||.|||| &5' -TGGGACCTTC-ATATGTGCA- 3' Ercc8 mmu-miR-452 beg:257 end:276 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& ||.||| |. |.||.|||| &5' GTTTCA---TTGTTTGTAAAC- 3' Ercc8 mmu-miR-452 beg:789 end:811 pic:3' CAGAGTCAAAGGA--GACGTTTGT 5'& ||||.| ||||| ||| || &5' GTCTTAA-TTCCTTCCTGTGAA-- 3' Ercc8 mmu-miR-453 beg:757 end:783 pic:3' ACGTT-CGAGTGATACTCCGTTGGA 5'& ||.| |||| | | .||||.|.| &5' TGTATTGCTCTC-AGAGGGCAGCTT 3' Ercc8 mmu-miR-466l beg:239 end:260 pic:3' TTATACACACGTACATAAATAT 5'& ||.|||||| |.|||.| &5' -ATGTGTGTGAT--TGTTTGT- 3' Ercc8 mmu-miR-470 beg:438 end:458 pic:3' TGAGTGGTCACG-GTCAGGTTCTT 5'& |.| || ||| ||||||| &5' ------CGG-GCACAGCCCAAGAA 3' Ercc8 mmu-miR-470 beg:483 end:504 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& .|||. |||| ||||||.| &5' -TTCATATGTGCA--TCCAAGGA 3' Ercc8 mmu-miR-485star beg:336 end:357 pic:3' CTCTCCTCTCG--GCACATACTGA 5'& |||| .||||||||. &5' -----GAGATCGATGTGTATGAT- 3' Ercc8 mmu-miR-491 beg:569 end:591 pic:3' GGAGTACCTTCC-CAAGGGGTGA 5'& |.||| ||.||| |||. .| &5' CTTCA-GGGAGGAGTTTA--GC- 3' Ercc8 mmu-miR-495 beg:241 end:262 pic:3' TTCTTCACGTGGT-ACAAACAAA 5'& ||| . | ||||||||| &5' -----GTGTGTGATTGTTTGTTT 3' Ercc8 mmu-miR-504 beg:55 end:72 pic:3' CTATCTCACGT-CTGGTCCCAGA 5'& ||| || ||||||. &5' --------GCACGAGCAGGGTT- 3' Ercc8 mmu-miR-509-5p beg:193 end:210 pic:3' TACTAACGGTGTAAGACCTCAT 5'& ||| .| ||||.|| &5' -------CCAGGTGCTGGGGT- 3' Ercc8 mmu-miR-541 beg:782 end:803 pic:3' TCACACTGGTTGTAGTCTTAGGGAA 5'& ||. .|| |||.|||| &5' ------ACTCA-GTCTTAATTCCTT 3' Ercc8 mmu-miR-541 beg:730 end:751 pic:3' TCACACTGGTTGTAGTC-TTAGGGAA 5'& || |.| |||| .| ||||||| &5' ---GT-ATC-ACATAGGCAATCCCT- 3' Ercc8 mmu-miR-542-5p beg:733 end:753 pic:3' AGCACTGTA-CTACTAGGGGCTC 5'& |||| |. |||||.|| &5' -----ACATAGGCAATCCCTGA- 3' Ercc8 mmu-miR-542-5p beg:342 end:364 pic:3' AGCACTGTAC-TACTA-GGGGCTC 5'& ||..|| ||||| |||.|| &5' ----GATGTGTATGATACCCTGA- 3' Ercc8 mmu-miR-568 beg:240 end:265 pic:3' CACACATATG--TAAATAT-GTA 5'& |||||.|. .|||.| ||| &5' -TGTGTGTGATTGTTTGTTTCAT 3' Ercc8 mmu-miR-666-5p beg:462 end:487 pic:3' CCGA-GAGTGTCGACAC-GGGCGA 5'& |.| .|| |||||| | ||. | &5' -GTTATTCCCAGCTGGGACCTTC- 3' Ercc8 mmu-miR-668 beg:611 end:626 pic:3' CCATCACCCGGCTCGGC-TCACTGT 5'& || ||||.|| &5' -------------GCAACAGTGGCA 3' Ercc8 mmu-miR-669g beg:22 end:45 pic:3' TAGTACAGTTGTGTATGTTACGT 5'& |||| . |||. |||.||. &5' ATCAGACTTCCACG-ACAGTGT- 3' Ercc8 mmu-miR-669h-5p beg:695 end:714 pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& |.|.| |||.||||||| &5' ----TTAGC----CACTCATGCAT 3' Ercc8 mmu-miR-669h-5p beg:809 end:830 pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& |||||.| |.||||||| &5' --ACTCAGCAAA--ATCCATGCA- 3' Ercc8 mmu-miR-669i beg:234 end:256 pic:3' CATACGTACACACATATACGT 5'& |.| |||||||||. ||. &5' -TGTACATGTGTGTGATTGT- 3' Ercc8 mmu-miR-670 beg:563 end:581 pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& || |||| .||||||| &5' -TC-CCACC----TTCAGGGA- 3' Ercc8 mmu-miR-673-3p beg:1 end:14 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& |||||||.|| &5' ------------TCAGCCCTGG- 3' Ercc8 mmu-miR-697 beg:819 end:837 pic:3' AGAGGTGTCCTGGTCCTACAA 5'& ||||. .| .|||||| &5' --TCCAT---GCAGGGATGT- 3' Ercc8 mmu-miR-702 beg:418 end:432 pic:3' CTCGCCCCATTTCCCACCCGT 5'& |||| ||||||| &5' -----GGGT----GGTGGGC- 3' Ercc8 mmu-miR-708 beg:1 end:20 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& .|||| .||||||| &5' -TCAGCCCT------GGCTCCTT 3' Ercc8 mmu-miR-760 beg:433 end:452 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& |||.||.|.| |||| &5' -CCCTACGGGCAC--AGCC- 3' Ercc8 mmu-miR-762 beg:536 end:561 pic:3' CGA-GACAGGGC-CGG-GGTCGGGG 5'& || ||| |.| ||. ||||||. &5' -CTCCTGA-CTGTGCTGCCAGCCT- 3' Ercc8 mmu-miR-763 beg:458 end:480 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& ||| ||| ||||||||||| &5' ---ACTTGTTATTCCCAGCTGG 3' Ercc8 mmu-miR-770-3p beg:428 end:454 pic:3' GGTCGA-GGTGCA-GTC-CGGGTGC 5'& ||||| |.||| || ||||| &5' CCAGCCCCTACGGGCACAGCCCA-- 3' Ercc8 mmu-miR-770-3p beg:154 end:171 pic:3' GGTC-GAGGTGCAGTCCGGGTGC 5'& ||| ||| |||.||| &5' -CAGACTC-------GGCTCAC- 3' Ercc8 mmu-miR-804 beg:769 end:786 pic:3' AGGTCCACTCCTTGTTGAGTGT 5'& |||| .||.||.||| &5' -------GAGG-GCAGCTTACA 3' Ercc8 mmu-miR-872 beg:125 end:149 pic:3' GGACTTGATTGT-TCATTG-GAA 5'& ||||.||||.| .| ||| || &5' CCTGGACTAGCCTGG-AACTCT- 3' Ercc8 mmu-miR-876-3p beg:693 end:706 pic:3' ACTTAATGAAACATTTGGTGAT 5'& ||| |.||||| &5' ----------TGTTAGCCACT- 3' Ercc8 mmu-miR-877star beg:768 end:779 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& |||||.|| &5' --------------AGAGGGCA 3' Ercc8 mmu-miR-878-5p beg:618 end:640 pic:3' ACAGAACTGTAGGT---TGATCTAT 5'& ||.|||| .|||||| &5' -----TGGCATCATAATGCTAGAT- 3' Ercc8 mmu-miR-883a-5p beg:801 end:819 pic:3' CATTGACGATGAAGAGAGTCGT 5'& |||. ||||||| &5' ----CTGTGAAA---CTCAGCA 3' Ercc8 mmu-miR-92astar beg:554 end:574 pic:3' CATTACGG-TGGTTAGGGGTGGA 5'& ||| .|| |.||||||| &5' -----GCCTGCCC-TTCCCACCT 3' Ercc8 mmu-miR-98 beg:172 end:191 pic:3' TTGTTATGTTGAAT-GATGGAGT 5'& .||.|| ||.|||| &5' ------GCAGCTATTCTGCCTC- 3' Ercc8 mmu-miR-99bstar beg:291 end:312 pic:3' GCCTGGGTGTCT-GTGCTCGAAC 5'& ||| . | .|||.||| &5' ---ACCTGTTAATCCTGAGTTTG 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ercc8; Ckn1; Csa mmu-let-7a 170 192 -UGAUAUGUUGGAU-GAUGGAGU |||: :||:|: ||:|||| CACUG-GCAGCUAUUCUGCCUCU Ercc8; Ckn1; Csa mmu-let-7b 168 192 UUG-GUGUGUUGGAU-GAUGGAGU || | :||:|: ||:|||| CACACUGGCAGCUAUUCUGCCUCU Ercc8; Ckn1; Csa mmu-let-7c 168 192 UUGGUA-UGUUGGAU-GAUGGAGU || :||:|: ||:|||| CACACUGGCAGCUAUUCUGCCUCU Ercc8; Ckn1; Csa mmu-let-7d 170 193 -UGAUACGUUGGAU-GAUGGAGA- |||: |||:|: ||:||||| CACUG-GCAGCUAUUCUGCCUCUG Ercc8; Ckn1; Csa mmu-let-7e 170 192 -UGAUAUGUUGG-AGGAUGGAGU |||: :||:|: |:||:|||| CACUG-GCAGCUAUUCUGCCUCU Ercc8; Ckn1; Csa mmu-let-7f 170 192 -UGAUAUGUUAGAU--GAUGGAGU |||: :||: ||| ||:|||| CACUG-GCAG-CUAUUCUGCCUCU Ercc8; Ckn1; Csa mmu-let-7g 170 192 -UGACAUGUUUGAU--GAUGGAGU |||| :| |:||| ||:|||| CACUG-GC-AGCUAUUCUGCCUCU Ercc8; Ckn1; Csa mmu-miR-106a 37 57 AUGG-ACGUGACAAUCGUGAAAC || ||: ||| |||||| GACAGUGUUGUGU--GCACUUC- Ercc8; Ckn1; Csa mmu-miR-106b 45 63 -UAGACGUGACAGUCGUGAAAU :| |||||| ||||||| UGUGUGCACU-UCAGCACG--- Ercc8; Ckn1; Csa mmu-miR-122a 36 59 UGUUUGUGGUAACA-GUGUGAGGU- :||| ::|||| ::||||:|| --CGACAGUGUUGUGUGCACUUCAG Ercc8; Ckn1; Csa mmu-miR-124a 312 336 -CCGU--AAGUGGCGCACGGAAU- || ||| |:|:||||:||| GGGAUAUUUCCCUGUGUGCUUUAA Ercc8; Ckn1; Csa mmu-miR-140* 301 329 -AGGCAC-CAAGAU-------GGGACACCAU ||| || |||: ||||||| AUCC-UGAGUUUGGGAUAUUUCCCUGUGU-- Ercc8; Ckn1; Csa mmu-miR-141 21 48 -GGUAGAAAU--GGU-CUGUCACAAU- ||||| ||| |||||||||: UCCAUCAGACUUCCACGACAGUGUUGU Ercc8; Ckn1; Csa mmu-miR-145 110 136 UUCCCUAA----GGACCCUUUUGACCUG- ||| ||||| |: |||||| ---CGAUGUAACCCUGGCUAGCCUGGACU Ercc8; Ckn1; Csa mmu-miR-148a 34 56 -UGUU-UCAAGACAUCACGUGACU ||:| ||| :||| ||||||| CACGACAGUGUUGU-GUGCACUU- Ercc8; Ckn1; Csa mmu-miR-148b 34 56 -UGUU-UCAAGACACUACGUGACU ||:| ||| :|||| |||||| CACGACAGUGUUGUG-UGCACUU- Ercc8; Ckn1; Csa mmu-miR-152 31 56 -GGGU----UCAAGACAGUACGUGACU :||| ||| :||| :|||||| UUCCACGACAGUGUUGU-GUGCACUU- Ercc8; Ckn1; Csa mmu-miR-184 6 26 -UGGGAAUAGUCAAGAGG--CAGGU- :|||| |||| ||||| AGCCCUGG------CUCCUUGUCCAU Ercc8; Ckn1; Csa mmu-miR-185 183 200 CUUGACGGAAA-GAGAGGU- |||||| ||| ||| --UCUGCCUCUGCUC-CCAG Ercc8; Ckn1; Csa mmu-miR-187 119 145 -GGCCGA-CGU-UGUGUUCUGUGCU- |:|||| || : || || | || CCUGGCUAGCCUGGACUAGCCUGGAA Ercc8; Ckn1; Csa mmu-miR-199b 153 177 -CUUGUCCA--UCAGAUUUGUGACCC ||:||| :| || ||||||| AGAGCAGACUCGG-CUC-ACACUGGC Ercc8; Ckn1; Csa mmu-miR-200a 22 48 UGUAGCAAU--GGU-CUGUCACAAU- |||| ||| |||||||||: CCAUCAGACUUCCACGACAGUGUUGU Ercc8; Ckn1; Csa mmu-miR-200b 22 48 CAGUAGUAAU--GGUCC-GUCAUAAU- ||||| ||| | ||||:||: -CCAUCAGACUUCCACGACAGUGUUGU Ercc8; Ckn1; Csa mmu-miR-200c 21 48 -GGUAGUAAU--GG-GCCGUCAUAAU- |||||| || || ||||:||: UCCAUCAGACUUCCACGACAGUGUUGU Ercc8; Ckn1; Csa mmu-miR-202 161 193 -AGAAGGGUA----CG-CGAUA---UGGAGA- || |:|| || ||||| :||||| CUCGGCUCACACUGGCAGCUAUUCUGCCUCUG Ercc8; Ckn1; Csa mmu-miR-20a 44 63 GAUGGACGUGAUAUUCGUGAAAU |: |||||| ||||| UUGUGUGCACUUC-AGCACG--- Ercc8; Ckn1; Csa mmu-miR-216a 174 213 GUGUCA-----ACGGU------------CGACUCUAAU- :||| |||| ||||:|:||| GGCAGCUAUUCUGCCUCUGCUCCCAGGUGCUGGGGUUAG Ercc8; Ckn1; Csa mmu-miR-22 155 182 -UGUCA-AGA--AGU-UGACCGUCGAA :||| || ||| |||||||||| AGCAGACUCGGCUCACACUGGCAGCUA Ercc8; Ckn1; Csa mmu-miR-222 116 140 CUCUGGG-UC-AUCGGUCUACAUCGA |||| :| ||||| |: |||| --AACCCUGGCUAGCCUGGACUAGCC Ercc8; Ckn1; Csa mmu-miR-24 112 141 GACAA--GGAC------GACUUGACUCGGU ||| |||| |||:||| |||| AUGUAACCCUGGCUAGCCUGGACU-AGCCU Ercc8; Ckn1; Csa mmu-miR-25 24 50 -AGUCUGGCU---CUGUUCACGUUAC- ||||||: |||| |||: :|| AUCAGACUUCCACGACA-GUGUUGUGU Ercc8; Ckn1; Csa mmu-miR-291b-3p 27 57 -CUGU-----UUGUUUU-ACCUACGUGAAA ||| :|||: || :||||||| AGACUUCCACGACAGUGUUGUGUGCACUUC Ercc8; Ckn1; Csa mmu-miR-295 26 57 -UCUGA----GUUUUCAU--CAU-CGUGAAA ||||| |:| |||: ||: |||||| CAGACUUCCACGACAGUGUUGUGUGCACUUC Ercc8; Ckn1; Csa mmu-miR-296 204 234 UGUCCUAA-CUCC-CC-------C-CCGGGA :||:|| |||| | | ||||| -UGGGGUUAGAGGUGUAUACCACGUGGCCCC Ercc8; Ckn1; Csa mmu-miR-298 173 196 CCUUCUUGUCGGGA----GGAGACGG- ::||||: |||||||: ----UGGCAGCUAUUCUGCCUCUGCUC Ercc8; Ckn1; Csa mmu-miR-299 199 226 UACAUAC-ACCCUG----CCAUU--UGGU- :|| ||||: |||: |||| ---GGUGCUGGGGUUAGAGGUGUAUACCAC Ercc8; Ckn1; Csa mmu-miR-301 36 56 CGAAACUGUUAUGAUA-ACGUGAC ||||:|::|:| |||||| ----CGACAGUGUUGUGUGCACUU Ercc8; Ckn1; Csa mmu-miR-301b 36 56 ACGAAACUGUUAUGGUA-ACGUGAC ||||:|: :| |||||| -----CGACAGUGUUGUGUGCACUU Ercc8; Ckn1; Csa mmu-miR-30b 201 224 UCGACUCACAUC-CUACAAAUGU ||||:| ||| |:||| ||| UGCUGGGGUUAGAGGUGUAUACC Ercc8; Ckn1; Csa mmu-miR-30c 201 224 -CGACUCUCACAUC-CUACAAAUGU ||||:| || ||| |:||| ||| UGCUGGG-GU-UAGAGGUGUAUACC Ercc8; Ckn1; Csa mmu-miR-30d 195 224 GAAGGUCA---GCCCC------UACAAAUGU |||| :|||| :||| ||| --CCCAGGUGCUGGGGUUAGAGGUGUAUACC Ercc8; Ckn1; Csa mmu-miR-31 162 191 -GUCGAU----ACGGUCGU--AGAACGGA- |:||| || |||| || ||||| UCGGCUCACACUGGCAGCUAUUC-UGCCUC Ercc8; Ckn1; Csa mmu-miR-323 35 53 UCUCCAGCUGGCACAUUACACG- |||| |||| :||||| -----ACGACAGUGUUGUGUGCA Ercc8; Ckn1; Csa mmu-miR-329 197 220 UUUUUCCAAUCGACCCA------CACAA |||| |||||| |||| ---CAGGU--GCUGGGGUUAGAGGUGUA Ercc8; Ckn1; Csa mmu-miR-331 202 232 AAGAUCCUA---UCCG-----GGUCC-CCG- ||:||:| |||: ||| | ||| -GCUGGGGUUAGAGGUGUAUACCACGUGGCC Ercc8; Ckn1; Csa mmu-miR-338 175 209 AGUUGUUUUAG--------UGA----CUACGACCU- ||:| ||: :|| |:||||||: GCAGCU--AUUCUGCCUCUGCUCCCAGGUGCUGGGG Ercc8; Ckn1; Csa mmu-miR-34a 154 179 -UUGUU--GGUCGAUUCUGUGACGGU- |:||: :|:||| |||||| || GAGCAGACUCGGCUC--ACACUGGCAG Ercc8; Ckn1; Csa mmu-miR-34b 175 191 GUUAGUCGAUUAAUGUGACGGAU |||||| |||||| ---GCAGCUAUU----CUGCCUC Ercc8; Ckn1; Csa mmu-miR-34c 155 191 -CGUU--AGUCGA---------UUGAUGUGACGGA- |||: ||:||| |:|||: |||||| AGCAGACUCGGCUCACACUGGCAGCUAUUCUGCCUC Ercc8; Ckn1; Csa mmu-miR-377 209 254 UGUUUUCAA-----------CGGAA-----------ACACACUA :|:|:|| ||| |||||||| UUAGAGGUGUAUACCACGUGGCCCCUCCUGUACAUGUGUGUGAUU Ercc8; Ckn1; Csa mmu-miR-378 191 216 -UGU--GUCCUGGACCUCAGUCCUC- :| |||| ||||:||:|| || UGCUCCCAGGUGCUGGGGUUAG-AGG Ercc8; Ckn1; Csa mmu-miR-411 201 230 -UGACUCCCAAUCACCUG-------GCACAA :||| ||||||| || |||| UGCUG-GGGUUAGAGGUGUAUACCACGUGG- Ercc8; Ckn1; Csa mmu-miR-422b 6 26 CCGGAAGACUGAGGUUCAGGUC ||| |||:|||| ||||| AGCC--CUGGCUCCUUGUCCAU Ercc8; Ckn1; Csa mmu-miR-423 44 67 GACUC-CCCGGAGUCUG-GCUCGA || | | |:|||| | ||||| UUGUGUGCACUUCAG-CACGAGCA Ercc8; Ckn1; Csa mmu-miR-429 10 48 UGCCGU--AAU-GGU------------CUGUCAUAAU- :||| ||: ||| ||||||:||: CUGGCUCCUUGUCCAUCAGACUUCCACGACAGUGUUGU Ercc8; Ckn1; Csa mmu-miR-449b 119 142 -GGUCGAUCGUUACGUGA-CGGA- |::|||||| || ||| |||| CCUGGCUAGCC-UGGACUAGCCUG Ercc8; Ckn1; Csa mmu-miR-466 241 261 CAGAAUACACACGC--ACAUACAUA |||||||:| ||| ||| ----CAUGUGUGUGAUUGUUUGUU- Ercc8; Ckn1; Csa mmu-miR-471 207 230 ACACUUUUCGUGAUAUGAUGCAU- || |:|:|:: ||||| ||||: GGUUAGAGGUG-UAUACCACGUGG Ercc8; Ckn1; Csa mmu-miR-484 120 144 UAGCCC-UCC--CCUGACUCGGACU- :|| || ||||| ||||||: -CUGGCUAGCCUGGACU-AGCCUGGA Ercc8; Ckn1; Csa mmu-miR-485-5p 104 132 CUUAAGUAGUG-----------CCGGUCGGAGA || |||| |||:||||| ---GUC-UCACGAUGUAACCCUGGCUAGCCUG- Ercc8; Ckn1; Csa mmu-miR-489 235 267 CGACG-GUAUAUACAC-------CACAGUAA- |||: |||:|:|||| || ||||| CCUGUACAUGUGUGUGAUUGUUUGUUUCAUUG Ercc8; Ckn1; Csa mmu-miR-497 190 207 -AUGUUUGGUGUCACACGACGAC |:| || ||| |||||| CUGCU--CC-CAG-GUGCUGG-- Ercc8; Ckn1; Csa mmu-miR-500 171 205 -GACU----------UGG-GAAC-GGGUCCACGUA |||: :|| || ||||||||| ACUGGCAGCUAUUCUGCCUCUGCUCCCAGGUGCU- Ercc8; Ckn1; Csa mmu-miR-501* 196 222 -GUUUAGGAA--CGGGC-CCACGUAA ||::| || |: | ||||:|| CCAGGUGCUGGGGUUAGAGGUGUAUA Ercc8; Ckn1; Csa mmu-miR-542-3p 282 302 AAAGUCAAUAGUUAGACAGUGU |||||| |:|| ||||:| -GUCAGUUUUUAACCUGUUAA- Ercc8; Ckn1; Csa mmu-miR-542-5p 344 365 GCACUGUAC-UACUA-GGGGCUC ||::|| ||||| |||:|| --CGAUGUGUAUGAUACCCUGAA Ercc8; Ckn1; Csa mmu-miR-546 11 29 -CUGAGGCAC-GGUGGUA |:|||| || |||:|| UGGCUCCUUGUCCAUCAG Ercc8; Ckn1; Csa mmu-miR-666 163 196 -CCGAG----AGUGUCGAC---ACGGG--CGA- ||||| | :||||| ||||: ||| CGGCUCACACUGGCAGCUAUUCUGCCUCUGCUC Ercc8; Ckn1; Csa mmu-miR-667 198 220 GAACC-CGACCCACCG-UCCACAGU || |||||| |||||| --AGGUGCUGGGGUUAGAGGUGUA- Ercc8; Ckn1; Csa mmu-miR-669c 155 184 -UGUGUGU----AG-GUGUGUGUUGAUA- :|| || || ||| :||:|||| AGCAGACUCGGCUCACACUGGCAGCUAUU Ercc8; Ckn1; Csa mmu-miR-670 50 71 AAGUGGUGUAUGUGA--GUCCCUA |||: || :||| ||||| -GCACUUCA-GCACGAGCAGGGU- Ercc8; Ckn1; Csa mmu-miR-672 169 192 -GUGUGUGUC-AUGUGGUUGGAGU ||| :||| ||: :|||| ACACUGGCAGCUAUUCU-GCCUCU Ercc8; Ckn1; Csa mmu-miR-680 192 225 -GGGGGUA--------CAGUCGUCUACG---GG- |:|||| ||:|| ||:||: || GCUCCCAGGUGCUGGGGUUAG-AGGUGUAUACCA Ercc8; Ckn1; Csa mmu-miR-683 153 180 -CUC--CUGUGUCGAAUGU---CGUCC ||| ||| |:||| ||| |||| AGAGCAGACUCGGCUCACACUGGCAGC Ercc8; Ckn1; Csa mmu-miR-685 184 200 CACGGAGUGGAGUCGGUAACU |||||| ||| ||| CUGCCUCUGCUC--CCAG--- Ercc8; Ckn1; Csa mmu-miR-689 51 74 CCUGGGG-CG-GCUCGCCCCUGC- ||::| || ||||| ||| | -CACUUCAGCACGAGCAGGGUUGU Ercc8; Ckn1; Csa mmu-miR-690 120 142 AAACCAACACUCGGA-----UCGGAAA ||| ||||| ||||| -CUGGCU---AGCCUGGACUAGCCUG- Ercc8; Ckn1; Csa mmu-miR-691 181 202 AAAAGACGGAGA-GAA-GUCCUUA |||||||||| || |||| -AUUCUGCCUCUGCUCCCAGGU-- Ercc8; Ckn1; Csa mmu-miR-700 312 331 CCACCUGAGCCAAGGG-CGCAC- |||: ||||| |:||| --GGGAUAU--UUCCCUGUGUGC Ercc8; Ckn1; Csa mmu-miR-702 201 232 CUCG-CCCCAUUUC-CCAC----------CCGU || ||||| || |||| ||| -UGCUGGGGUU-AGAGGUGUAUACCACGUGGCC Ercc8; Ckn1; Csa mmu-miR-705 182 200 ACGGGUGGGGUGGAGGGUGG :|::||:| |||||| -UUCUGCCUCUGCUCCCAG- Ercc8; Ckn1; Csa mmu-miR-706 91 110 AAAAAACUCUGUCCCAAAGAGA ||||||||||| |||| -GUUUUGAGACAGUG--UCUCA Ercc8; Ckn1; Csa mmu-miR-709 181 199 AGGAGGACGGAGACGGAGG- |:||||||||||: || --AUUCUGCCUCUGCUCCCA Ercc8; Ckn1; Csa mmu-miR-712* 131 166 GUUG--UGGGCCCC----CA--------CUGAGCGU :|| :||:|| || |||||| GGACUAGCCUGGAACUCUGUAUAGAGCAGACUCGG- Ercc8; Ckn1; Csa mmu-miR-713 42 68 -CGACACACG-GAAGUCA----CGU- |:||||||| |||||| ||| UGUUGUGUGCACUUCAGCACGAGCAG Ercc8; Ckn1; Csa mmu-miR-714 6 24 CGCUGGCUGGCCG-GGAGCAGC :|| |:||| |||:||| --AGCC--CUGGCUCCUUGUCC Ercc8; Ckn1; Csa mmu-miR-715 33 55 -GUGCG--C-CCCCACACGUGCCUC |||| | | |||||||| CCACGACAGUGUUGUGUGCACU--- Ercc8; Ckn1; Csa mmu-miR-759 38 61 CAGUUUUAACAAACGUGAGA-CG- ||: :|||| ||||||: || -ACAGUGUUGUGUGCACUUCAGCA Ercc8; Ckn1; Csa mmu-miR-761 281 301 ACACAGUCAAAGUG-GGACGACG ||||||||: ||||:| --AGUCAGUUUUUAACCUGUUA- Ercc8; Ckn1; Csa mmu-miR-762 1 19 CGAGACAGGGCCGGGGUCGGGG- ||||| ||||::||:|| ---CUGUCA--GCCCUGGCUCCU Ercc8; Ckn1; Csa mmu-miR-763 169 208 CGGUGACC------AAGA--------AGGGU---CGACC- |||||| |||| ||||| ||||| -ACACUGGCAGCUAUUCUGCCUCUGCUCCCAGGUGCUGGG Ercc8; Ckn1; Csa mmu-miR-764-3p 213 239 UGUCAAC---GGUGAUACCGG--AGGA- :|| |||| :||||| |||| -AGGUGUAUACCAC-GUGGCCCCUCCUG Ercc8; Ckn1; Csa mmu-miR-770-3p 9 39 -GGUCGAGGUGCAG----UCC--GGGUGC- |::||||| ||| || :||||| CCUGGCUCCUUGUCCAUCAGACUUCCACGA Ercc8; Ckn1; Csa mmu-miR-801 42 69 -CAGCUAAGGCGUG----CGUG-UCGUUAG ||:| | :|||| |||| ||||: UGUUG--UGUGCACUUCAGCACGAGCAGG- Ercc8; Ckn1; Csa mmu-miR-802 65 89 UUCCUACUUAGAAA--CAAUGACU |||:| |||| ||||:|| CAGGGUUGUUCUUCCCGUUAUUGU Ercc8; Ckn1; Csa mmu-miR-93 51 73 GAUGGA--CGUGCUUGUCGUGAAAC ||:| ||||||:||| :| -CACUUCAGCACGAGCAGGGUUG-- Ercc8; Ckn1; Csa mmu-miR-98 168 192 UUGUUA-UGUUGAAU-GAUGGAGU ||| :||:|| ||:|||| CACACUGGCAGCUAUUCUGCCUCU Ercc8; Ckn1; Csa mmu-miR-141 39 46 ------------------GGUAGAAAU--GGU-CUGUCACAAU ||||| ||| |||||||||: UCAGCCCUGGCUCCUUGUCCAUCAGACUUCCACGACAGUGUUGU Ercc8; Ckn1; Csa mmu-miR-199a 169 176 --------------------CUUGUCCA--UCAGACUUGUGACCC ||:||| :| || ||||||| CUAGCCUGGAACUCUGUAUAGAGCAGACUCGG-CUC-ACACUGGC Ercc8; Ckn1; Csa mmu-miR-199b 169 176 --------------------CUUGUCCA--UCAGAUUUGUGACCC ||:||| :| || ||||||| CUAGCCUGGAACUCUGUAUAGAGCAGACUCGG-CUC-ACACUGGC Ercc8; Ckn1; Csa mmu-miR-200a 39 46 U------------------GUAGCAAU--GGU-CUGUCACAAU |||| ||| |||||||||: UCAGCCCUGGCUCCUUGUCCAUCAGACUUCCACGACAGUGUUGU Ercc8; Ckn1; Csa mmu-miR-22 174 181 -----------------UGUCA-AGA--AGU-UGACCGUCGAA :||| || ||| |||||||||| CUGGAACUCUGUAUAGAGCAGACUCGGCUCACACUGGCAGCUA Ercc8; Ckn1; Csa mmu-miR-291b-3p 49 56 --------------CUGU-----UUGUUUU-ACCUACGUGAAA ||| :|||: || ||||||| CUCCUUGUCCAUCAGACUUCCACGACAGUGUUGUGUGCACUUC Ercc8; Ckn1; Csa mmu-miR-298 187 194 CCUUCUUGUC-GGGA----------------------GGAGACGG |||:||| |:| |||||||: U--AGAGCAGACUCGGCUCACACUGGCAGCUAUUCUGCCUCUGCUC Ercc8; Ckn1; Csa mmu-miR-377 245 252 UGUUUUCAA-----------CGGAA-----------ACACACUA :|:|:|| ||| |||||||| -UAGAGGUGUAUACCACGUGGCCCCUCCUGUACAUGUGUGUGAUU Ercc8; Ckn1; Csa mmu-miR-709 184 191 ------------------AGGAGGAC-G-----GAGACGGAGG || ||| | :||||||||: GUAUAGAGCAGACUCGGCUCACACUGGCAGCUAUUCUGCCUCUG Ercc8; Ckn1; Csa mmu-let-7a 171 191 UGAUAUGUUGG-AUGAUGGAGu |||: :||:|: | ||:|||| ACTG-GCAGCTATTCTGCCTCt Ercc8; Ckn1; Csa mmu-let-7b 165 191 uugGUGUG-UUG--GAU--GAUGGAGu ||||| ::| ||| ||:|||| gctCACACTGGCAGCTATTCTGCCTCt Ercc8; Ckn1; Csa mmu-let-7d 171 191 UGAUACGUUGG-AUGAUGGAGA |||: |||:|: | ||:||||| ACTG-GCAGCTATTCTGCCTCT Ercc8; Ckn1; Csa mmu-let-7e 171 191 UGAUAUGUUGG-AGGAUGGAGu |||: :||:|: |:||:|||| ACTG-GCAGCTATTCTGCCTCt Ercc8; Ckn1; Csa mmu-let-7f 171 191 UGAUAUGUUAGAU--GAUGGAGu |||: :||: ||| ||:|||| ACTG-GCAG-CTATTCTGCCTCt Ercc8; Ckn1; Csa mmu-let-7g 171 191 UGACAUGUUUGAU--GAUGGAGu |||| :| |:||| ||:|||| ACTG-GC-AGCTATTCTGCCTCt Ercc8; Ckn1; Csa mmu-miR-106a 36 57 augGACGUGACAAUCGUGAAac | |:::||| |||||| cgaCAGTGTTGTGTGCACTTca Ercc8; Ckn1; Csa mmu-miR-106b 37 57 uaGACGUGACAGUCGUGAAau | |:::||| |||||| gaCAGTGTTGTGTGCACTTca Ercc8; Ckn1; Csa mmu-miR-122a 33 57 uGU-UUGUGGUAACA-GUGUGAGGU || :||| ::|||| ::||||:|| cCACGACAGTGTTGTGTGCACTTCA Ercc8; Ckn1; Csa mmu-miR-128a 152 177 uUUUC-UCUG-GCCAA--GUGACacu |:|| |||| ||| | ||||| tAGAGCAGACTCGGCTCACACTGgca Ercc8; Ckn1; Csa mmu-miR-128b 152 177 cUUUC-UCUG-GCCAA--GUGACacu |:|| |||| ||| | ||||| tAGAGCAGACTCGGCTCACACTGgca Ercc8; Ckn1; Csa mmu-miR-140* 309 330 AGGCACCAAGAUGGGACACcau |::| | | :| ||||||| TTTGGGATATTTCCCTGTGtgc Ercc8; Ckn1; Csa mmu-miR-141 22 46 GGUAG--AAAUGGU-CUGUCACAAu ||||| | ||| ||||||||| CCATCAGACTTCCACGACAGTGTTg Ercc8; Ckn1; Csa mmu-miR-145 111 134 uUCCCUAAGGACCCUUUUGACCUG | | | ||||| |: |||||| gATGTAACCCTGGCTAGCCTGGAC Ercc8; Ckn1; Csa mmu-miR-148a 35 56 UGUU-UCAAGACAUCACGUGAcu ||:| ||| :||| ||||||| ACGACAGTGTTGT-GTGCACTtc Ercc8; Ckn1; Csa mmu-miR-148b 35 56 UGUU-UCAAGACACUACGUGAcu ||:| ||| :|||| |||||| ACGACAGTGTTGTG-TGCACTtc Ercc8; Ckn1; Csa mmu-miR-152 32 56 gGGU----UCAAGACAGUACGUGAcu ||| ||| :||| :|||||| tCCACGACAGTGTTGT-GTGCACTtc Ercc8; Ckn1; Csa mmu-miR-184 1 24 ugggaAUAGUC---A-AGAGG--CAGGU |:|||| | |||| ||||| ----cTGTCAGCCCTGGCTCCTTGTCCA Ercc8; Ckn1; Csa mmu-miR-185 181 197 cuuGACGGAAAGA-GAGGu ||||| ||| |||| attCTGCC--TCTGCTCCc Ercc8; Ckn1; Csa mmu-miR-187 139 165 GGCC----GACGU-UGUGUUCUGUGCu |:|| |||:| | | |||| || CTGGAACTCTGTATAGAGCAGACTCGg Ercc8; Ckn1; Csa mmu-miR-199a 154 176 CUUGUC-CAUCAGACUUGUGACCc ||:||| | | || ||||||| GAGCAGACTCGGCT-CACACTGGc Ercc8; Ckn1; Csa mmu-miR-199b 154 176 CUUGUC-CAUCAGAUUUGUGACCc ||:||| | | || ||||||| GAGCAGACTCGGCT-CACACTGGc Ercc8; Ckn1; Csa mmu-miR-200a 22 46 uGUAG-C-AAUGGU-CUGUCACAAu |||| | | ||| ||||||||| cCATCAGACTTCCACGACAGTGTTg Ercc8; Ckn1; Csa mmu-miR-200b 20 46 CA-GUAG--UAAUGGU-CCGUCAUAAu || |||| | | ||| | ||||:|| GTCCATCAGACTTCCACGACAGTGTTg Ercc8; Ckn1; Csa mmu-miR-200c 22 46 GGUAGU---AAUGGGCCGUCAUAAu |||||| || | || ||||:|| CCATCAGACTTCCACGACAGTGTTg Ercc8; Ckn1; Csa mmu-miR-202 189 226 AGA--AGGGUACGCG--------------AUAUGGAGa ||| ||||| |:|| |||||| | TCTGCTCCCAGGTGCTGGGGTTAGAGGTGTATACCACg Ercc8; Ckn1; Csa mmu-miR-20a 33 57 GAUG--GACGUGAUAUUCGUGAAau | || | |:::|:|: |||||| CCACGACAGTGTTGTGTGCACTTca Ercc8; Ckn1; Csa mmu-miR-216a 188 211 GUGUCAACGGU---CGACUCUAAU | | | | ||| ||||:|:||| CTCTGCTCCCAGGTGCTGGGGTTA Ercc8; Ckn1; Csa mmu-miR-22 156 181 uGUC-AAG--AAGU-UGACCGUCGAa ||| || ||| |||||||||| gCAGACTCGGCTCACACTGGCAGCTa Ercc8; Ckn1; Csa mmu-miR-222 96 119 CUCUGGGUCAUCG-GU-CUACAUCGa |||| ||||: | || |||||| | GAGA--CAGTGTCTCACGATGTAACc Ercc8; Ckn1; Csa mmu-miR-24 120 140 GACAAGGAC-GACUUGACUCGGu ||| |: | |||:||| |||| CTG-GCTAGCCTGGACT-AGCCt Ercc8; Ckn1; Csa mmu-miR-25 25 55 AGUCUG--GCU-CUGUU------CACGUUAc |||||| | | ||||: ||||| | TCAGACTTCCACGACAGTGTTGTGTGCACTt Ercc8; Ckn1; Csa mmu-miR-291b-3p 32 56 cuGU-UUGUU-UUACCUACGUGAAa || :|||: : || :||||||| tcCACGACAGTGTTGTGTGCACTTc Ercc8; Ckn1; Csa mmu-miR-295 27 56 UCUGA----GUUUUCAU--CA-UCGUGAAa ||||| |:| |||: || |||||| AGACTTCCACGACAGTGTTGTGTGCACTTc Ercc8; Ckn1; Csa mmu-miR-296 203 233 uguCCUAA-CUCC-C--------CCCCGGGa ||:|| |||| | | ||||| ctgGGGTTAGAGGTGTATACCACGTGGCCCc Ercc8; Ckn1; Csa mmu-miR-298 174 194 CCUUCUUGUCGGGAGGAGACGg || || :| :|: ||||||| GGCAG-CTATTCTGCCTCTGCt Ercc8; Ckn1; Csa mmu-miR-299 198 224 UACAU-ACACC---CUGC-CAUUUGGU | ||: || || || | ||| |||| AGGTGCTGGGGTTAGAGGTGTATACCA Ercc8; Ckn1; Csa mmu-miR-301 32 55 cgaaaCUGUUAUGAUA-ACGUGAc ||||:|::|:| |||||| tccacGACAGTGTTGTGTGCACTt Ercc8; Ckn1; Csa mmu-miR-301b 31 55 acgaaaCUGUUAUGGUA-ACGUGAc ||||:|::::| |||||| ttccacGACAGTGTTGTGTGCACTt Ercc8; Ckn1; Csa mmu-miR-30c 202 223 CGACUCUCACAUC-CUACAAAUGu |||| |:|| ||| |:||| ||| GCTG-GGGT-TAGAGGTGTATACc Ercc8; Ckn1; Csa mmu-miR-30d 193 223 GAAGGUC----AGCCC-----CUACAAAUGu || |||| | ||| |:||| ||| CTCCCAGGTGCTGGGGTTAGAGGTGTATACc Ercc8; Ckn1; Csa mmu-miR-31 163 189 GUCGA---U-ACGGUCG-UAGAACGGA |:||| | || |||| ||: ||||| CGGCTCACACTGGCAGCTATTCTGCCT Ercc8; Ckn1; Csa mmu-miR-323 30 51 ucuccaGCUGGCACAUUACACG |||| |||| :||||| cttccaCGACAGTGTTGTGTGC Ercc8; Ckn1; Csa mmu-miR-329 202 221 uuuuuCCAAUCGACCCACACAa |||||| ||||| | gctggGGTTAG--AGGTGTATa Ercc8; Ckn1; Csa mmu-miR-331 182 203 AAGAUCCUAUCC--GGGUCCCCG |||| | | | |||||| || TTCT-GCCTCTGCTCCCAGGTGC Ercc8; Ckn1; Csa mmu-miR-338 185 207 aguuguuuuAGUGACUACGACCu || | |:|||||| tgcctctgcTCCCAGGTGCTGGg Ercc8; Ckn1; Csa mmu-miR-34a 155 177 UUGU-UG-GUCGAUUCUGUGACGGU |:|| || |:||| |||||| || AGCAGACTCGGCT--CACACTGGCA Ercc8; Ckn1; Csa mmu-miR-34b 170 190 GUUA--GUCGAUUAAUGUGACGGAu || | ||||| ||| |||||| CACTGGCAGCT-ATT---CTGCCTc Ercc8; Ckn1; Csa mmu-miR-34c 156 177 CGUU--AGUCGAUUGAUGUGACGGa |||: ||:||| | |||||| | GCAGACTCGGCT--C-ACACTGGCa Ercc8; Ckn1; Csa mmu-miR-378 194 215 uGUGUCCUGGACCUCAGUCcuc | |||| ||||:||:|| tCCCAGGTGCTGGGGTTAGagg Ercc8; Ckn1; Csa mmu-miR-411 202 230 uGACUCCCAAUCACC-----UG--GCACaa ||| ||||||| || || |||| gCTG-GGGTTAGAGGTGTATACCACGTGgc Ercc8; Ckn1; Csa mmu-miR-429 25 46 uGCCGUAAUGGU-CUGUCAUAAu | | | | ||| ||||||:|| tCAG-ACTTCCACGACAGTGTTg Ercc8; Ckn1; Csa mmu-miR-449b 120 140 GGUCGAUCGUUACGUGA-CGGA |::|||||| || ||| |||| CTGGCTAGC-CTGGACTAGCCT Ercc8; Ckn1; Csa mmu-miR-466 238 261 CA-GAAUACACACGCACAUACAua || | |:|||||| ||| ||| GTACATGTGTGTGATTGTTTGTtt Ercc8; Ckn1; Csa mmu-miR-484 118 142 uaGCCC--UC--CCCUGACUCGGACu | || || |||| |||||| ccCTGGCTAGCCTGGAC-TAGCCTGg Ercc8; Ckn1; Csa mmu-miR-485-5p 111 132 CUUAAGUAGUGCCGGUCGGAga || | | | :|||:||||| GATGTAACCCTGGCTAGCCTgg Ercc8; Ckn1; Csa mmu-miR-489 232 253 cGACGGUAUAUACACCACAGUAA || |::|| |||| |||| ||| cCTCCTGTACATGT-GTGTGATT Ercc8; Ckn1; Csa mmu-miR-497 189 208 auguuuGGUGUCACACGACgac || ||| |||||| tctgctCC-CAG-GTGCTGggg Ercc8; Ckn1; Csa mmu-miR-500 184 205 GACUUGGGAAC--GGGUCCACGua ||| ||: || ||||||||| CTG--CCTCTGCTCCCAGGTGCtg Ercc8; Ckn1; Csa mmu-miR-501* 182 206 guuuaGGA-AC--GGGCCCACGuaa ||| || ||| ||||| ttctgCCTCTGCTCCCAGGTGCtgg Ercc8; Ckn1; Csa mmu-miR-542-3p 281 302 aaAGUCAAUAGUUAGACAGUgu |||||| |:|| ||||:| agTCAGTTTTTAACCTGTTAat Ercc8; Ckn1; Csa mmu-miR-542-5p 342 364 gcaCUGUAC-UACUA-GGGGCUc ||::|| ||||| |||:|| atcGATGTGTATGATACCCTGAa Ercc8; Ckn1; Csa mmu-miR-546 12 28 CUGAGGCAC-GGUGGUa |:|||| || |||:|| GGCTCCTTGTCCATCAg Ercc8; Ckn1; Csa mmu-miR-615 152 171 uUCUCCCUCUGGGUCCGAGccu ||| | ||||:| ||||| tAGA-GCAGACTC-GGCTCaca Ercc8; Ckn1; Csa mmu-miR-666 164 194 CCGAGAGU----GUCG---ACACG--GGCGA ||||| || |||| | ||| |:||| GGCTCACACTGGCAGCTATTCTGCCTCTGCT Ercc8; Ckn1; Csa mmu-miR-667 196 220 gaaCC-CGACCC--ACCGUCCACAgu || |||||| | | |||||| ccaGGTGCTGGGGTTAG-AGGTGTat Ercc8; Ckn1; Csa mmu-miR-669c 158 182 UGUGUGUAG-GUGUG--UGUUGAUA | || |: | ||||| :||:|||| AGACTCGGCTCACACTGGCAGCTAT Ercc8; Ckn1; Csa mmu-miR-670 49 71 AAGUGGUGUAUGUG--AGUCCCua | |||: || :||| ||||| TGCACTTCA-GCACGAGCAGGGtt Ercc8; Ckn1; Csa mmu-miR-672 168 191 GUGUG--UGUC-AUGUGGUUGGAGu ||||| :||| ||: :| :|||| CACACTGGCAGCTAT-TCTGCCTCt Ercc8; Ckn1; Csa mmu-miR-680 186 205 gGGGGUACAGUCGUCUACGgg ||:| || : |||:||| gCCTC-TGCTCCCAGGTGCtg Ercc8; Ckn1; Csa mmu-miR-683 154 179 CUC--CUGUGUCGAAUGU---CGUCc ||| ||| |:||| ||| |||| GAGCAGACTCGGCTCACACTGGCAGc Ercc8; Ckn1; Csa mmu-miR-685 162 185 caCGGAGUG-GA--GUCGGUAAcu | ||||| || ||||:||| tcGGCTCACACTGGCAGCTATTct Ercc8; Ckn1; Csa mmu-miR-689 50 72 CCUGGGG-CG-GCUCGCCCCugc | ||::| || ||||| ||| GCACTTCAGCACGAGCAGGGttg Ercc8; Ckn1; Csa mmu-miR-690 119 142 aaACC-AAC--ACUCGGAUCGGAaa ||| | | || | ||||||| ccTGGCTAGCCTG-GACTAGCCTgg Ercc8; Ckn1; Csa mmu-miR-691 180 203 AAAAGACGGAGA-GA-AGUCCuua | |||||||||| || |||| TATTCTGCCTCTGCTCCCAGGtgc Ercc8; Ckn1; Csa mmu-miR-700 309 329 ccACCUGAGCCAAGGGCGCAC |||: | | ||:|:||| ttTGGGATATTTCCCTGTGTG Ercc8; Ckn1; Csa mmu-miR-702 200 221 CUCG-CCCCAUUUCCCACccgu | || ||||| |: |||| GTGCTGGGGTTAGAGGTGtata Ercc8; Ckn1; Csa mmu-miR-705 181 200 acgGGUGGGGUGGAGGGUgg |::||:| |||||| attCTGCCTCTGCTCCCAgg Ercc8; Ckn1; Csa mmu-miR-706 90 109 aaAAAACUCUGUCCCAAAGAGa |||||||||| || |||| ggTTTTGAGACA--GTGTCTCa Ercc8; Ckn1; Csa mmu-miR-709 171 191 aggagGACG--GAGACGGAGg | || :|||||||| actggCAGCTATTCTGCCTCt Ercc8; Ckn1; Csa mmu-miR-712* 142 166 gUUGUGGGC----CCCCACUGAGCgu ||| :|:| | | |||||| gAAC-TCTGTATAGAGCAGACTCGgc Ercc8; Ckn1; Csa mmu-miR-712* 115 139 gUUGUGGGCC---CCCA-CUGAGCGu ||| ||:|| | | |||| || tAAC-CCTGGCTAGCCTGGACTAGCc Ercc8; Ckn1; Csa mmu-miR-713 43 62 CGACACACG-GAAGUCacgu |:||||||| |||||| GTTGTGTGCACTTCAGcacg Ercc8; Ckn1; Csa mmu-miR-714 1 23 cgCUGGCUGG-CCG-GGAGCAGc | | | || ||| |||:||| ctGTCAGCCCTGGCTCCTTGTCc Ercc8; Ckn1; Csa mmu-miR-715 34 65 GUGC-GCCCC--CACA--------CGUGCcuc |||| | | | |||| ||||| CACGACAGTGTTGTGTGCACTTCAGCACGagc Ercc8; Ckn1; Csa mmu-miR-744 1 20 cGACAAUCGGGAUCGGGGcgu |||| ||||||:||:|| -CTGTCAGCCCTGGCTCCttg Ercc8; Ckn1; Csa mmu-miR-759 37 59 CAGUUUUAACAAACGUG-AGACG | ||: :|||| ||||| || || GACAGTGTTGTGTGCACTTCAGC Ercc8; Ckn1; Csa mmu-miR-761 279 301 acaCAGUC-AAAGUGGGACGAcg ||||| |||:| ||||:| tcaGTCAGTTTTTAACCTGTTaa Ercc8; Ckn1; Csa mmu-miR-763 178 203 CGGU--GACCAAGA--AGGGUCGACc ||:| ||| ||| |||||| || GCTATTCTGCCTCTGCTCCCAGGTGc Ercc8; Ckn1; Csa mmu-miR-764-3p 211 237 UGUCAAC----GGUGAUACC--GGAGGA | || || |||| :||| |||||| AGAGGTGTATACCAC-GTGGCCCCTCCT Ercc8; Ckn1; Csa mmu-miR-770-3p 10 37 GGUCGAGGUGC----AGUCCG--GGUGC |::||||| :| |||| | ||||| CTGGCTCCTTGTCCATCAGACTTCCACG Ercc8; Ckn1; Csa mmu-miR-801 43 63 CAGCUAAGGCGUGCGUGUCGUuag ||:| | :|||| : ||||| GTTG--TGTGCAC-TTCAGCAcga Ercc8; Ckn1; Csa mmu-miR-93 27 57 gaUGGACGUGCUUGU---------CGUGAAac ||:| |||| ||| |||||| agACTTCCACG-ACAGTGTTGTGTGCACTTca

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ercc8 RAID00180525 mmu-miR-377-3p miRNA MIMAT0000741 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00181626 mmu-miR-301a-3p miRNA MIMAT0000379 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00309875 mmu-miR-132-3p miRNA MIMAT0000144 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00429997 mmu-miR-149-5p miRNA MIMAT0000159 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00446527 mmu-miR-141-3p miRNA MIMAT0000153 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00448560 mmu-miR-181a-5p miRNA MIMAT0000210 Ercc8 mRNA 71991 Prediction 0.2202 Ercc8 RAID00621187 mmu-miR-24-3p miRNA MIMAT0000219 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00629326 mmu-miR-135b-5p miRNA MIMAT0000612 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00649957 mmu-miR-758-3p miRNA MIMAT0003889 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00687157 mmu-miR-376b-3p miRNA MIMAT0001092 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00720331 mmu-miR-152-3p miRNA MIMAT0000162 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID00761635 mmu-miR-181c-5p miRNA MIMAT0000674 Ercc8 mRNA 71991 Prediction 0.2202 Ercc8 RAID00918867 mmu-miR-382-5p miRNA MIMAT0000747 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01171618 mmu-miR-543-3p miRNA MIMAT0003168 Ercc8 mRNA 71991 Prediction 0.2202 Ercc8 RAID01306024 mmu-miR-6965-5p miRNA MIMAT0027830 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01372357 mmu-miR-491-5p miRNA MIMAT0003486 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01377525 mmu-miR-7651-3p miRNA MIMAT0029805 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01403800 mmu-miR-339-5p miRNA MIMAT0000584 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01440496 mmu-miR-1192 miRNA MIMAT0005850 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01639085 mmu-miR-362-3p miRNA MIMAT0004684 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01667765 mmu-miR-125a-3p miRNA MIMAT0004528 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01679171 mmu-miR-7235-5p miRNA MIMAT0028438 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01774188 mmu-miR-208a-3p miRNA MIMAT0000520 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID01909559 mmu-miR-135a-5p miRNA MIMAT0000147 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02016697 mmu-miR-504-5p miRNA MIMAT0004889 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02030122 mmu-miR-224-5p miRNA MIMAT0000671 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02040971 mmu-miR-337-3p miRNA MIMAT0000578 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02140645 mmu-miR-421-3p miRNA MIMAT0004869 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02155451 mmu-miR-143-3p miRNA MIMAT0000247 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02185237 mmu-miR-181d-5p miRNA MIMAT0004324 Ercc8 mRNA 71991 Prediction 0.2202 Ercc8 RAID02193532 mmu-miR-200a-3p miRNA MIMAT0000519 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02197522 mmu-miR-199a-5p miRNA MIMAT0000229 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02242101 mmu-miR-495-3p miRNA MIMAT0003456 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02334501 mmu-miR-183-5p miRNA MIMAT0000212 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02483639 mmu-miR-22-3p miRNA MIMAT0000531 Ercc8 mRNA 71991 Prediction 0.2202 Ercc8 RAID02561134 mmu-miR-329-3p miRNA MIMAT0000567 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02756237 mmu-miR-493-3p miRNA MIMAT0004888 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02762093 mmu-miR-361-5p miRNA MIMAT0000704 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02943445 mmu-miR-499-5p miRNA MIMAT0003482 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02958938 mmu-miR-7047-5p miRNA MIMAT0027998 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID02982512 mmu-miR-32-5p miRNA MIMAT0000654 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03012672 mmu-miR-21a-5p miRNA MIMAT0000530 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03037764 mmu-miR-181b-5p miRNA MIMAT0000673 Ercc8 mRNA 71991 Prediction 0.2202 Ercc8 RAID03416288 mmu-miR-882 miRNA MIMAT0004847 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03475021 mmu-miR-590-3p miRNA MIMAT0004896 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03523504 mmu-miR-3103-5p miRNA MIMAT0014937 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03566307 mmu-miR-212-3p miRNA MIMAT0000659 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03634351 mmu-miR-10b-5p miRNA MIMAT0000208 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03715790 mmu-miR-370-3p miRNA MIMAT0001095 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03729268 mmu-miR-10a-5p miRNA MIMAT0000648 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03733333 mmu-miR-301b-3p miRNA MIMAT0004186 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID03747463 mmu-miR-7083-3p miRNA MIMAT0028073 Ercc8 mRNA 71991 Prediction 0.1828 Ercc8 RAID04042619 mmu-miR-873a-5p miRNA MIMAT0004936 Ercc8 mRNA 71991 Prediction 0.1828