DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Rbx1 ATTTA 74-427 1641-1645

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000137 mmu-miR-126-5p 56438 Rbx1 gcgcaUGGUUUUCAUUAUUac :::|| |||||| ucaaaGUUAAUUUUAAUAAaa 3 17 1234 1254 [mm9:15:81306762-81306782:+] 0.5050 124 0 -4.05 -0.3156 MIMAT0000152 mmu-miR-140* 56438 Rbx1 ggcaCCAAGAUGG-GACACCAu | ||||::: ||||||| caccGUUUCUGUUGCUGUGGUu 2 18 1070 1091 [mm9:15:81306598-81306619:+] 0.5050 156 7 -25.15 -0.3810 MIMAT0004541 mmu-miR-188-3p 56438 Rbx1 acguuuGGGACGUACACC-CUc :| ||:|||||| || gcuguuUCAUGUAUGUGGAGAg 2 16 171 192 [mm9:15:81305699-81305720:+] 0.6716 123 0 -22.29 -0.5768 MIMAT0004573 mmu-miR-293* 56438 Rbx1 guUUUACAGUGUGUCAAACUCa |:|| || :: |||||||| gcAGAUUUC-UG-AGUUUGAGg 2 21 918 937 [mm9:15:81306446-81306465:+] 0.5019 152 7 -12.87 -0.1688 MIMAT0004628 mmu-miR-21* 56438 Rbx1 cugucggguaGCUGACGACAAc :|::||||||| aaguuggaggUGGUUGCUGUUu 2 13 156 177 [mm9:15:81305684-81305705:+] 0.6810 148 7 -17.08 -0.4711 MIMAT0004629 mmu-miR-22* 56438 Rbx1 auuucgaacggugaCUUCUUGa ||||||| caggcaggaaugagGAAGAACa 2 9 374 395 [mm9:15:81305902-81305923:+] 0.5642 140 7 -12.83 -0.3405 MIMAT0004647 mmu-miR-338-5p 56438 Rbx1 gugagucGUGGUCCUAUAACAa |:| : ||||||| guguuccCGCAGCCAUAUUGUa 2 16 112 133 [mm9:15:81305640-81305661:+] 0.6904 143 7 -11.18 -0.7230 MIMAT0000605 mmu-miR-350 56438 Rbx1 cuuucacAU-ACCCGAAACACuu || || :|||||| gcagccaUAUUGUAUUUUGUGuc 3 16 120 142 [mm9:15:81305648-81305670:+] 0.6904 126 0 -7.77 -0.1238 MIMAT0005444 mmu-miR-218-2* 56438 Rbx1 gcgccacGAACUGUCUUGGUAc :| ||:|||||||| uuauacaUUAGAUAGAACCAUg 2 16 58 79 [mm9:15:81305586-81305607:+] 0.6904 159 7 -20.73 -0.9188 MIMAT0000742 mmu-miR-378* 56438 Rbx1 ugUGUCCUGG-ACCUCA-GUCCUc | || || | |||| ||||| guAAAGAUCCUUUGAGUCCAGGAg 2 21 681 704 [mm9:15:81306209-81306232:+] 0.5039 123 0 -21.80 -0.3367 MIMAT0004691 mmu-miR-382* 56438 Rbx1 uuuuUCACAACAGGCACUUACu || || |:||||||| gguuAGCAGUGACUGUGAAUGa 2 19 512 533 [mm9:15:81306040-81306061:+] 0.5659 154 7 -18.39 -0.7524 MIMAT0002104 mmu-miR-463* 56438 Rbx1 uacuaccuguugUUUAAUCCAu ||||||||| ccagguacuuggAAAUUAGGUa 2 11 662 683 [mm9:15:81306190-81306211:+] 0.5039 150 7 -15.42 -0.7761 MIMAT0003732 mmu-miR-668 56438 Rbx1 ccAUCACC-C-GGCUC-GGCUCACUGu |: ||| | |: || |||||||| caUGAUGGAGUCUAAGAACGAGUGACu 2 23 438 464 [mm9:15:81305966-81305992:+] 0.5943 151 7 -21.93 -0.3030 MIMAT0004822 mmu-miR-770-5p 56438 Rbx1 gcaCCGGGUCUGU--GCACCACGa || ||||:|| ||||||| ccaGGGCCAGGCAGUGGUGGUGCa 2 20 859 882 [mm9:15:81306387-81306410:+] 0.5029 162 7 -28.84 -0.1869 MIMAT0003739 mmu-miR-673-5p 56438 Rbx1 gagGUUCC--UGGUCUC-GACACUc ||:|| | ||| | |||||| cuaCAGGGUUAGCAGUGACUGUGAa 2 20 506 530 [mm9:15:81306034-81306058:+] 0.5659 126 6 -19.45 -0.4929 MIMAT0003452 mmu-miR-678 56438 Rbx1 ggAGGUCA--GG---AACGUGGCUCUg |:|||| |: || :||||||| ggUUCAGUGGCUGUAUUCUACCGAGAc 2 21 1044 1070 [mm9:15:81306572-81306598:+] 0.5050 150 7 -23.01 -0.2414 MIMAT0003474 mmu-miR-694 56438 Rbx1 gaAGUCCGUUGUAAAAGUc ||| | ::|||||| ugUCAUUC-UUGUUUUCAa 2 18 1220 1237 [mm9:15:81306748-81306765:+] 0.5050 127 6 -4.61 -0.1712 MIMAT0003498 mmu-miR-708* 56438 Rbx1 gaucUUCGAGUGUCAGAUCAAc || | | | ||||||| ucuaAAACAGAAAUUCUAGUUu 2 19 713 734 [mm9:15:81306241-81306262:+] 0.5039 150 7 -11.98 -0.4122 MIMAT0004844 mmu-miR-880 56438 Rbx1 agaugagucucUCCUACCUCAu | |||||||| guuuucaucucAUGAUGGAGUc 2 12 428 449 [mm9:15:81305956-81305977:+] 0.5943 147 7 -15.17 -0.2433 MIMAT0004863 mmu-miR-220 56438 Rbx1 uuCACAGACUGUGA-CACCACc | | | |:|| | |||||| caGGGCCAGGCAGUGGUGGUGc 2 20 860 881 [mm9:15:81306388-81306409:+] 0.5029 123 6 -16.15 -0.1672 MIMAT0004865 mmu-miR-297c 56438 Rbx1 uguACAUGU-ACGUGUGU-AUGUa |||| | | :| ||| |||| cuuUGUAAACUCUAAACACUACAg 2 20 488 511 [mm9:15:81306016-81306039:+] 0.5943 122 0 -8.92 -0.4900 MIMAT0004867 mmu-miR-327 56438 Rbx1 uaggaguacggGGAGUUCa ||||||| cagaaaggcagCCUCAAGa 2 9 217 235 [mm9:15:81305745-81305763:+] 0.6207 140 7 -14.04 -0.4581 MIMAT0004870 mmu-miR-453 56438 Rbx1 acGUUCGAGUGAUACUCC-GUUGGa ||: | | | | ||| ||||| uaCAGAGUGAGUUUCAGGACAACCa 2 23 944 968 [mm9:15:81306472-81306496:+] 0.5019 122 0 -13.80 -0.2240 MIMAT0004892 mmu-miR-568 56438 Rbx1 cacacAUAUGUAAAUAUGUa |:| :| ||||||| cuuccUGU-UAAUUAUACAu 2 16 47 65 [mm9:15:81305575-81305593:+] 0.6904 145 7 -6.30 -1.0320 MIMAT0004940 mmu-miR-511 56438 Rbx1 acucacgUCUCG--UUUUCCGUa | ||| :||||||| gagccagAAAGCCAGAAAGGCAg 2 15 205 227 [mm9:15:81305733-81305755:+] 0.6207 145 7 -15.73 -0.2105 MIMAT0005291 mmu-miR-582-5p 56438 Rbx1 ucauUGACCAACUUGUUGACAu ||| || ||||||| ugccACUACUU---CAACUGUc 2 19 1156 1174 [mm9:15:81306684-81306702:+] 0.5050 142 7 -8.49 -0.5083 MIMAT0005292 mmu-miR-582-3p 56438 Rbx1 aacccAAGUCAACAAGUU-GUCc ||| |||| |||| ||| cugucUUCUGUUG-UCAAGCAGa 2 18 1170 1191 [mm9:15:81306698-81306719:+] 0.5050 127 0 -14.27 -0.5532 MIMAT0005830 mmu-miR-466l 56438 Rbx1 uuauacacacguacAUAAAUAu ||||||| aauuuuaauaaaaaUAUUUAUg 2 9 1242 1263 [mm9:15:81306770-81306791:+] 0.5050 140 7 -4.46 -0.8246 MIMAT0005832 mmu-miR-669g 56438 Rbx1 uaguacagUUGUG-UAUGUUACGu ||::: | ||||||| auugcaaaAAUGUGAAACAAUGCu 2 16 1197 1220 [mm9:15:81306725-81306748:+] 0.5050 146 7 -10.70 -0.7137 MIMAT0005838 mmu-miR-669j 56438 Rbx1 acAAAC--GU-ACACUCAUAUACGu |||| || | || ||||||| ugUUUGGACAGUUUGCAUAUAUGCc 2 21 630 654 [mm9:15:81306158-81306182:+] 0.5332 154 7 -13.62 -0.1902 MIMAT0005840 mmu-miR-669i 56438 Rbx1 cauacgUACACACAUAUACGu :| || ||||||| uggacaGUUUGCAUAUAUGCc 2 16 634 654 [mm9:15:81306162-81306182:+] 0.5039 147 7 -9.56 -0.1624 MIMAT0007874 mmu-miR-1904 56438 Rbx1 ggaGGGAGGUCUCCUCGUCUUg ::|| : | ||||||| gucUUCUGUUGUCAAGCAGAAa 2 20 1172 1193 [mm9:15:81306700-81306721:+] 0.5050 143 7 -16.70 -0.6807 MIMAT0007874 mmu-miR-1904 56438 Rbx1 ggagGGAGGUCUCCUC-GUCUUg :|| : ||||| ||||| gugaUCUGAGAAGGAGCCAGAAa 2 19 192 214 [mm9:15:81305720-81305742:+] 0.6461 122 0 -17.09 -0.7286 MIMAT0007879 mmu-miR-1893 56438 Rbx1 gcuCCGCAGGUCGC--GGGCG-CGg || ||:::|:| ||||| || uuuGGAGUUUGGUGUUCCCGCAGCc 2 20 101 125 [mm9:15:81305629-81305653:+] 0.6904 122 0 -26.22 -1.0249 MIMAT0009398 mmu-miR-1934 56438 Rbx1 ucUCCUGCUUCGUC---CCCUGGUCu || || :|||| ||||||| gaAGAACAUGGCAGCCUUGGACCAGc 2 22 388 413 [mm9:15:81305916-81305941:+] 0.5642 152 7 -21.97 -0.1682 MIMAT0009409 mmu-miR-1944 56438 Rbx1 uuAGUCUUGAACUGUAAGUCG--UGUCUc || ||::|||| : |||| ||||| uuUCUGAGUUUGA-GGCCAGCCUACAGAg 2 26 923 950 [mm9:15:81306451-81306478:+] 0.5019 123 0 -23.97 -0.1995 MIMAT0009435 mmu-miR-1962 56438 Rbx1 uacacagGGUC--ACGGUCGGAGa |||| | ||||||| cagaaagCCAGAAAGGCAGCCUCa 2 16 209 232 [mm9:15:81305737-81305760:+] 0.6207 146 7 -20.53 -0.6150 MIMAT0009442 mmu-miR-1969 56438 Rbx1 uggguacaauuucagaGGUAGAa |||||| uucccgcaaggcguacCCAUCUg 2 8 9 31 [mm9:15:81305537-81305559:+] 0.6904 120 6 -15.72 -0.1094 MIMAT0009446 mmu-miR-1971 56438 Rbx1 agaGUCGGGU-CGGAAAUg ::|: || ||||||| uggUGGUGCAUGCCUUUAa 2 16 873 891 [mm9:15:81306401-81306419:+] 0.5019 146 7 -13.00 -0.3660 MIMAT0009446 mmu-miR-1971 56438 Rbx1 agagucgggUCGGAAAUg |||||||| gucaaauaaAGCCUUUAa 2 10 140 157 [mm9:15:81305668-81305685:+] 0.6904 145 7 -12.36 -1.2299 MIMAT0009458 mmu-miR-1981 56438 Rbx1 cgGUGCAGAUUCGGGUCGGAAAUg :::||| || : |||||||| uuUGUGUC-AAAUAAAGCCUUUAa 2 23 135 157 [mm9:15:81305663-81305685:+] 0.6904 156 7 -16.75 -1.2312 MIMAT0009458 mmu-miR-1981 56438 Rbx1 cgGUGCAGAUUCGGGU-CGGAAAUg || || :|: || ||||||| ggCA-GUGGUGGUGCAUGCCUUUAa 2 23 868 891 [mm9:15:81306396-81306419:+] 0.5019 147 7 -17.81 -0.3660 MIMAT0011287 mmu-miR-2183 56438 Rbx1 uccuccaGUCCCCAAGUu || ||||||| cuuggccCAUGGGUUCAu 2 12 262 279 [mm9:15:81305790-81305807:+] 0.6253 147 7 -13.89 -0.4426 MIMAT0015640 mmu-miR-3470a 56438 Rbx1 ggUCGGACCAGAUGUUUCAcu | :|| ||:| |||||| ucAUUCUUGUUUUCAAAGUua 3 20 1222 1242 [mm9:15:81306750-81306770:+] 0.5050 143 0 -12.99 -0.2640 MIMAT0015641 mmu-miR-3470b 56438 Rbx1 ggUCGGACCAGAUGUCUCACu || | | |||||||||| ugAGGCCAGCCUACAGAGUGa 2 20 933 953 [mm9:15:81306461-81306481:+] 0.5019 163 7 -28.49 -0.5960 MIMAT0015644 mmu-miR-1186b 56438 Rbx1 caCCACGUACGGAAAUUAGGGu ||||||||||||||||||| guGGUGCAUGCCUUUAAUCCCa 2 21 875 896 [mm9:15:81306403-81306424:+] 0.5019 200 7 -43.07 -0.3794 MIMAT0015644 mmu-miR-1186b 56438 Rbx1 caccACGUACGGAAAUUAGGGu | :|||||| ||||||| ugcaUAUAUGCCUGUAAUCCCa 2 19 643 664 [mm9:15:81306171-81306192:+] 0.5039 170 7 -23.64 -0.4954 MIMAT0015646 mmu-miR-3474 56438 Rbx1 cuUAGGUGCAGAGGAGGGUCCc || ::| | | ||||||| auAUAUGCCUGUAAUCCCAGGu 2 21 646 667 [mm9:15:81306174-81306195:+] 0.5039 152 7 -19.22 -0.3529 MIMAT0000125 mmu-miR-23b 56438 Rbx1 ccauuagggaccgUUACACUa ||||||| aaaagauugcaaaAAUGUGAa 2 9 1192 1212 [mm9:15:81306720-81306740:+] 0.5050 140 7 -8.57 -0.9220 MIMAT0000126 mmu-miR-27b 56438 Rbx1 cgUCUUGA--AUCGGUGACACUu ||:::| ||: ||||||| acAGGGUUAGCAGUGACUGUGAa 2 20 508 530 [mm9:15:81306036-81306058:+] 0.5659 150 7 -23.58 -0.4997 MIMAT0000133 mmu-miR-101a 56438 Rbx1 aagucaauagUGUCAUGACAu |: ||||||| gacccaaaaaAUCGUACUGUg 2 12 561 581 [mm9:15:81306089-81306109:+] 0.5624 143 7 -10.73 -0.5745 MIMAT0000133 mmu-miR-101a 56438 Rbx1 aaGUCAAUAGUGUCA-UGACAu ||| | :|||| ||||| uaCAGGGUUAGCAGUGACUGUg 2 20 507 528 [mm9:15:81306035-81306056:+] 0.5659 123 0 -18.73 -0.3247 MIMAT0004528 mmu-miR-125a-3p 56438 Rbx1 ccgAG-GGUUCUUGGAGUGGACa || :|| || :||||||| aagUCAUCAUAAAGUUCACCUGa 2 20 600 622 [mm9:15:81306128-81306150:+] 0.5624 154 7 -18.77 -1.1401 MIMAT0000151 mmu-miR-140 56438 Rbx1 gauGGUAUCCCAUUUUG-GUGAc :| || || |:||| |||| uguUCUUAAGG-AGAACACACUu 2 20 243 264 [mm9:15:81305771-81305792:+] 0.6253 121 0 -10.65 -0.1709 MIMAT0000155 mmu-miR-142-3p 56438 Rbx1 agGUAUUUCAUCCUUUGUGAUGu ::|||| | ||||||||| uuUGUAAACU-CUAAACACUACa 2 22 489 510 [mm9:15:81306017-81306038:+] 0.5943 159 7 -14.01 -0.9772 MIMAT0000159 mmu-miR-149 56438 Rbx1 ccCUCACU--UCUGUGCCUCGGUCu |||||| || | |||||||| gaGAGUGAUCUGAGAAGGAGCCAGa 2 22 188 212 [mm9:15:81305716-81305740:+] 0.6461 168 7 -30.07 -0.5966 MIMAT0000159 mmu-miR-149 56438 Rbx1 cccucacUUCUGUG-CCUCGGUCu || || : |||||||| uaaucccAACACUUGGGAGCCAGa 2 17 889 912 [mm9:15:81306417-81306440:+] 0.5019 151 7 -21.17 -0.2879 MIMAT0000208 mmu-miR-10b 56438 Rbx1 guguuuaagccaaGAUGUCCCAu ||||||||| uaaacucuaaacaCUACAGGGUu 2 11 493 515 [mm9:15:81306021-81306043:+] 0.5943 150 7 -17.50 -0.5705 MIMAT0000209 mmu-miR-129-5p 56438 Rbx1 cguucgggUCUGGCGUUUUUc |||::||||||| gcagaaaaAGAUUGCAAAAAu 2 14 1187 1207 [mm9:15:81306715-81306735:+] 0.5050 157 7 -16.67 -0.8842 MIMAT0000209 mmu-miR-129-5p 56438 Rbx1 cguUCGGGUCUGGCGUUUUUc :|| :| |:: |||||| gcuGGCAUAAAUUUCAAAAAa 2 19 783 803 [mm9:15:81306311-81306331:+] 0.5039 126 6 -6.41 -0.1238 MIMAT0000211 mmu-miR-182 56438 Rbx1 gccacacucaagauGGUAACGGUUu |::||||||| uauauaaagaaaccCUGUUGCCAAa 2 12 973 997 [mm9:15:81306501-81306525:+] 0.5019 147 7 -13.64 -0.4791 MIMAT0000224 mmu-miR-194 56438 Rbx1 agGUGUACCUCA----ACGACAAUGu |:|| || || ||||||| ccCGCAAGGCGUACCCAUCUGUUACu 2 21 11 36 [mm9:15:81305539-81305564:+] 0.6904 143 7 -18.61 -0.2428 MIMAT0000247 mmu-miR-143 56438 Rbx1 cuCGAUG-UCACGAAGUAGAGu ||| : ||| :|||||||| cuGCUCUGAGU-UUUCAUCUCa 2 20 419 439 [mm9:15:81305947-81305967:+] 0.5943 156 7 -17.97 -1.0563 MIMAT0000366 mmu-miR-290-5p 56438 Rbx1 uuucaCGGGGGUAUCAAACUCa | :::| |||||||| aggcaGAUUUCUGAGUUUGAGg 2 18 916 937 [mm9:15:81306444-81306465:+] 0.5019 149 7 -13.46 -0.1737 MIMAT0000369 mmu-miR-292-5p 56438 Rbx1 guuuUCUCGGGGGUCAAACUCa ||| ::|: |||||||| aggcAGAUUUCUGAGUUUGAGg 2 19 916 937 [mm9:15:81306444-81306465:+] 0.5019 162 7 -18.56 -0.1704 MIMAT0000532 mmu-miR-23a 56438 Rbx1 ccUUUAGGGACCGUUACACUa |:||: | ||||||| aaAGAUUGC-AAAAAUGUGAa 2 20 1193 1212 [mm9:15:81306721-81306740:+] 0.5050 141 7 -9.80 -0.9220 MIMAT0000535 mmu-miR-29a 56438 Rbx1 auuggcUAAAGUCUACC-ACGAu :|| ||:||| |||| cuuuaaGUUGGAGGUGGUUGCUg 2 17 152 174 [mm9:15:81305680-81305702:+] 0.6810 120 0 -18.70 -0.7071 MIMAT0000537 mmu-miR-27a 56438 Rbx1 cgccuugaaUCGGUGACACUu ||: ||||||| aggguuagcAGUGACUGUGAa 2 13 510 530 [mm9:15:81306038-81306058:+] 0.5659 148 7 -18.96 -0.4997 MIMAT0000582 mmu-miR-338-3p 56438 Rbx1 guuguuuuAGUGACUACGACCu |:| ||||||| aguuuucuUUAAACAUGCUGGc 2 15 838 859 [mm9:15:81306366-81306387:+] 0.5039 142 7 -11.92 -0.1039 MIMAT0000616 mmu-miR-101b 56438 Rbx1 aagucgauagUGUCAUGACAu |: ||||||| gacccaaaaaAUCGUACUGUg 2 12 561 581 [mm9:15:81306089-81306109:+] 0.5624 143 7 -10.73 -0.5745 MIMAT0000616 mmu-miR-101b 56438 Rbx1 aaGUCGAUAGUGUCA-UGACAu ||| | :|||| ||||| uaCAGGGUUAGCAGUGACUGUg 2 20 507 528 [mm9:15:81306035-81306056:+] 0.5659 123 0 -18.50 -0.3301 MIMAT0000648 mmu-miR-10a 56438 Rbx1 guGUUUAAGCCU--AGAUGUCCCAu :||| || | ||||||||| ugUAAACUCUAAACACUACAGGGUu 2 22 491 515 [mm9:15:81306019-81306043:+] 0.5943 156 7 -17.50 -0.5741 MIMAT0000671 mmu-miR-224 56438 Rbx1 uugccuugguGAUCACUGAAu |||||||||| uguuacucguCUAGUGACUUc 2 12 30 50 [mm9:15:81305558-81305578:+] 0.6904 155 7 -17.70 -0.7996 MIMAT0000677 mmu-miR-7a 56438 Rbx1 uguuguuuUAGUGAUCAGAAGGu | | || ||||||| accccuccAGCUCU-GUCUUCCu 2 16 339 360 [mm9:15:81305867-81305888:+] 0.5159 145 7 -13.53 -0.2128 MIMAT0000678 mmu-miR-7b 56438 Rbx1 uguuguuuuaguguuCAGAAGGu ||||||| aaccccuccagcucuGUCUUCCu 2 9 338 360 [mm9:15:81305866-81305888:+] 0.5159 140 7 -12.36 -0.2284 MIMAT0000741 mmu-miR-377 56438 Rbx1 uguuuucAACG-GAAACACACUa |||: :||||||| | agccauaUUGUAUUUUGUGUCAa 2 16 122 144 [mm9:15:81305650-81305672:+] 0.6904 126 0 -9.14 -0.1281 MIMAT0003151 mmu-miR-378 56438 Rbx1 ggaagacuGAGGUUCAGGUCa ||:::||||||| uaaagaucCUUUGAGUCCAGg 2 14 682 702 [mm9:15:81306210-81306230:+] 0.5039 153 7 -17.42 -0.2289 MIMAT0001092 mmu-miR-376b 56438 Rbx1 uucACCUACAAGGAGA-UACUa || :| ||| ||| |||| cucUGAGUUUUCAUCUCAUGAu 2 19 422 443 [mm9:15:81305950-81305971:+] 0.5943 126 0 -9.00 -0.4232 MIMAT0004750 mmu-miR-425 56438 Rbx1 aguugcccucacuAGCACAGUaa |:|||||| gccauauuguauuUUGUGUCAaa 3 11 123 145 [mm9:15:81305651-81305673:+] 0.6904 126 0 -9.53 -0.2495 MIMAT0004750 mmu-miR-425 56438 Rbx1 agUUGCCCUCACUAGC-ACAGUAa ||:| || | :| |||||| aaAAUGUGAAACAAUGCUGUCAUu 2 22 1203 1226 [mm9:15:81306731-81306754:+] 0.5050 121 6 -11.44 -0.4915 MIMAT0003112 mmu-miR-489 56438 Rbx1 cgaCGGUAU---AUACACCACAGUaa |||||| ||| | |||||| gcaGCCAUAUUGUAUUUUGUGUCAaa 3 21 120 145 [mm9:15:81305648-81305673:+] 0.6904 147 0 -17.84 -0.2451 MIMAT0003128 mmu-miR-485 56438 Rbx1 cuuaaGUAGUGCCGGUCGGAGa || | || ||||||| aaagcCAGAAAGG-CAGCCUCa 2 18 212 232 [mm9:15:81305740-81305760:+] 0.6207 147 7 -16.40 -0.5939 MIMAT0003727 mmu-miR-374 56438 Rbx1 gugaaucguccaacaUAAUAUa |||||| agugacuuccuguuaAUUAUAc 2 8 42 63 [mm9:15:81305570-81305591:+] 0.6904 120 6 -5.10 -0.1473 MIMAT0004854 mmu-miR-876-5p 56438 Rbx1 aucacuaagugucuCUUUAGGu ||||||| ccuacaaaggucuuGAAAUCCu 2 9 1110 1131 [mm9:15:81306638-81306659:+] 0.5050 140 7 -10.68 -0.5150 MIMAT0004896 mmu-miR-590-3p 56438 Rbx1 ugAUCGAAUAUGUAUUUUAAu || :|| || |||||| | guUAAUUU-UA-AUAAAAAUa 2 20 1239 1257 [mm9:15:81306767-81306785:+] 0.5050 123 0 -3.19 -0.1416

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G013636 Rbx1 Mus musculus 56438

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Rbx1 mmu-miR-23b beg:1193 end:1212 pic:3' CCATTAGGGACCGTTACACTA 5'& .||. | ||||||| &5' ---GATTGCAAA-AATGTGA- 3' Rbx1 mmu-miR-669g beg:1203 end:1220 pic:3' TAGTACAGTTGTGTATGTTACGT 5'& |||| || ||||||| &5' ---ATGTGAA-----ACAATGC- 3' Rbx1 mmu-miR-10a beg:503 end:515 pic:3' GTGTTTAAGCCTAGATGTCCCAT 5'& ||||||||| &5' -------------CTACAGGGT- 3' Rbx1 mmu-miR-10b beg:503 end:515 pic:3' GTGTTTAAGCCAAGATGTCCCAT 5'& ||||||||| &5' -------------CTACAGGGT- 3' Rbx1 mmu-miR-678 beg:1051 end:1071 pic:3' GGAGGTCAGGAACGTGGCTCTG 5'& || .| ||. |||||||| &5' -CTGTATTCT----ACCGAGAC 3' Rbx1 mcmv-miR-m108-2-5p.2 beg:444 end:463 pic:3' CACTGGCGAGCGC-TGCTCACT 5'& || . || | |||||||| &5' --GAGT-CTAA-GAACGAGTGA 3' Rbx1 mmu-miR-328 beg:854 end:868 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||| |||||||| &5' -------GGCC---AGGGCCAG 3' Rbx1 mmu-miR-3072 beg:732 end:749 pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& || ||. ||||||| &5' ----GGGGTCT---AGGGGGC- 3' Rbx1 mmu-miR-880 beg:433 end:449 pic:3' AGATGAGTCTCTCCTACCTCAT 5'& |||| |||||||| &5' ----CTCAT----GATGGAGT- 3' Rbx1 mmu-miR-463star beg:668 end:684 pic:3' TACTACCTGTTGTTTAATCCAT 5'& |||| ||||||||| &5' ----TGGA-----AATTAGGTA 3' Rbx1 mmu-miR-3470b beg:935 end:954 pic:3' GGTCGGACCAGATGTCTCACT 5'& ||||||| ||||||||| &5' CCAGCCT-----ACAGAGTGA 3' Rbx1 mmu-miR-1962 beg:213 end:232 pic:3' TACACAGGGTCA--CGGTCGGAGA 5'& |||| | ||||||| &5' -------CCAGAAAGGCAGCCTC- 3' Rbx1 mmu-miR-485 beg:214 end:232 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& || || ||||||| &5' -----CAGAAAGG-CAGCCTC- 3' Rbx1 mmu-miR-327 beg:221 end:235 pic:3' TAGGAGTACGG-GGAGTTCA 5'& || ||||||| &5' --------GCAGCCTCAAG- 3' Rbx1 mmu-miR-3475 beg:334 end:349 pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||||| ||||||| &5' ---AAACC-----CCTCCAG- 3' Rbx1 mmu-miR-1953 beg:0 end:14 pic:3' GTCTTCGGACTC-TTGAAAGGGT 5'& || .|||||||| &5' ---------GAAAGACTTTCCC- 3' Rbx1 mmu-miR-218-2star beg:65 end:80 pic:3' GCGCCACGAACTGTCTTGGTAC 5'& ||.||||||||| &5' ----------GATAGAACCATG 3' Rbx1 mmu-miR-149 beg:196 end:213 pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& .||| ||||||||| &5' -------GAGAA--GGAGCCAGA 3' Rbx1 mmu-miR-668 beg:450 end:463 pic:3' CCATCACCCGGCTCGGCTCACTGT 5'& || |||||||| &5' -----------GAA-CGAGTGAC- 3' Rbx1 mmu-miR-1971 beg:874 end:891 pic:3' AGAGTCGGGT-CGGAAATG 5'& .|. || ||||||| &5' ----GGTGCATGCCTTTA- 3' Rbx1 mmu-miR-1981 beg:874 end:891 pic:3' CGGTGCAGATTCGGGT-CGGAAATG 5'& .|. || ||||||| &5' ----------GGTGCATGCCTTTA- 3' Rbx1 mmu-miR-1934 beg:394 end:413 pic:3' TCTCCTGCTTCGTCC---CCTGGTCT 5'& .|||| ||||||| &5' ---------GGCAGCCTTGGACCAG- 3' Rbx1 mmu-miR-2183 beg:262 end:279 pic:3' TCCTCCA-GTCCCCAAGTT 5'& || || ||||||| &5' ----GGCCCATGGGTTCA- 3' Rbx1 mmu-miR-501-3p beg:866 end:884 pic:3' GTTTAGGAACGGG--C-CCACGTAA 5'& || | ||||||| &5' ---------GCAGTGGTGGTGCAT- 3' Rbx1 mmu-miR-101a beg:571 end:582 pic:3' AAGTCAATAGTGTCATGACAT 5'& |||||||. &5' -------------GTACTGTG 3' Rbx1 mmu-miR-101b beg:571 end:582 pic:3' AAGTCGATAGTGTCATGACAT 5'& |||||||. &5' -------------GTACTGTG 3' Rbx1 mmu-miR-7b beg:343 end:360 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||.| || ||||||| &5' -CAGC----TCT---GTCTTCC- 3' Rbx1 mmu-miR-7a beg:345 end:360 pic:3' TGTTGTTTTAGTGAT-CAGAAGGT 5'& .|| ||||||| &5' -----------GCTCTGTCTTCC- 3' Rbx1 mmu-miR-382star beg:516 end:534 pic:3' TTTTTCACAACAGGCACTTACT 5'& |||| |.|||||||| &5' ----AGTGA---CTGTGAATGA 3' Rbx1 mcmv-miR-m107-1-5p beg:444 end:466 pic:3' CCACTGAGC-TC-TGCTCACTGGC 5'& || || || |||||||||.| &5' ---GAGTCTAAGAACGAGTGACTG 3' Rbx1 mcmv-miR-m107-1-5p beg:508 end:527 pic:3' CCACTGAGCTCTG-C-TCACTGGC 5'& |.| | ||||||.| &5' --------GGGTTAGCAGTGACTG 3' Rbx1 mcmv-miR-m108-2-5p.1 beg:508 end:528 pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& || |.| || ||||||.|. &5' -GG-GTTAGC----AGTGACTGT 3' Rbx1 mcmv-miR-m108-2-5p.1 beg:1035 end:1058 pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& | |||| |. || ||||.|.|. &5' -GATGCTGGT-TC-AGTGGCTGT 3' Rbx1 mcmv-miR-m88-1 beg:909 end:929 pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& ||.| |.|| ||.||||| &5' AGGCA--GGCA--GATTTCTG 3' Rbx1 mghv-miR-M1-3 beg:610 end:621 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& |.|||||| &5' -------------GTTCACCT- 3' Rbx1 mmu-let-7a beg:1154 end:1169 pic:3' TTGATATGTTGGATGATGGAGT 5'& .|| |||||.||| &5' ---------GCC-ACTACTTCA 3' Rbx1 mmu-let-7b beg:1149 end:1169 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& ||. .|| |||||.||| &5' --CCGGT--GCC-ACTACTTCA 3' Rbx1 mmu-let-7c beg:1149 end:1169 pic:3' TTGGTATGTTGGATGATGGAGT 5'& ||. .|| |||||.||| &5' --CCGGT--GCC-ACTACTTCA 3' Rbx1 mmu-let-7d beg:1152 end:1168 pic:3' TTGATACGTTGGATGATGGAGA 5'& |. .|| |||||.|| &5' ------GT-GCC-ACTACTTC- 3' Rbx1 mmu-let-7gstar beg:861 end:883 pic:3' CGTTCCGTCACCGGACATGTCA 5'& || |||||||||. ||.|| &5' GCCAGGCAGTGGTG-GTGCA-- 3' Rbx1 mmu-let-7i beg:1150 end:1169 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |.| | |||||.||| &5' --CGGTGCC----ACTACTTCA 3' Rbx1 mmu-let-7istar beg:860 end:883 pic:3' TCGTTCCGTCATCGAACGCGTC 5'& .|| |||||||.|. |.||| &5' GGCCAGGCAGTGGTG-GTGCA- 3' Rbx1 mmu-miR-103 beg:1204 end:1223 pic:3' AGTATCGGGACA---TGTTACGACGA 5'& ||| |||||||||. &5' ---------TGTGAAACAATGCTGT- 3' Rbx1 mmu-miR-105 beg:653 end:674 pic:3' TGGTGTTCG-TAGAC-TCGTGAACC 5'& |. ||| .|.|||||| &5' -------GTAATCCCAGGTACTTGG 3' Rbx1 mmu-miR-107 beg:1204 end:1223 pic:3' ACTATCGGGACA---TGTTACGACGA 5'& ||| |||||||||. &5' ---------TGTGAAACAATGCTGT- 3' Rbx1 mmu-miR-1186 beg:878 end:903 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||||||||| ||| ||||. &5' CATGCCTTTAATCCCAACACTT 3' Rbx1 mmu-miR-1186b beg:640 end:665 pic:3' CACCACGT----ACGGAAATTAGGGT 5'& |||| ||||| |||||||| &5' ----TGCATATATGCCTGTAATCCCA 3' Rbx1 mmu-miR-1186b beg:872 end:897 pic:3' CACCACGTACGGAAATTAGGGT 5'& |||||||||||||||||||||| &5' GTGGTGCATGCCTTTAATCCCA 3' Rbx1 mmu-miR-1190 beg:742 end:764 pic:3' CTGTCTCCCCTTG-----GAGTCGACT 5'& .|||| .| |||||||| &5' -----GGGGGCGCTGTAGCTCAGCTG- 3' Rbx1 mmu-miR-1196 beg:900 end:926 pic:3' TCC---GTCTCCGTCCATCTAAA 5'& .|| |||||||||| |||||| &5' GGGAGCCAGAGGCAGGCAGATTT 3' Rbx1 mmu-miR-125a-3p beg:599 end:622 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& |. .|| || .||||||| &5' -GTCATCATAAAGTTCACCTG- 3' Rbx1 mmu-miR-125b-5p beg:1128 end:1137 pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& .|||||| &5' --------------TTCAGGG- 3' Rbx1 mmu-miR-128 beg:508 end:530 pic:3' TTTCTCTGGCCA-AGTGACACT 5'& ||.| | | ||||||| &5' --AGGGTTAGCAGTGACTGTGA 3' Rbx1 mmu-miR-129-5p beg:1181 end:1207 pic:3' CGTTCGGG----TCTGGCGTTTTTC 5'& ||||| |||..||||||| &5' -CAAGCAGAAAAAGATTGCAAAAA- 3' Rbx1 mmu-miR-129-5p beg:553 end:571 pic:3' CGTTCGGGTCTGGCGTTTTTC 5'& |||. |||| |||||| &5' --AAGTT--GACC-CAAAAA- 3' Rbx1 mmu-miR-142-3p beg:487 end:511 pic:3' AGGTATTTCATCCTTTGTGATGT 5'& |. |||| |||||||||| &5' TTTGTAAACTCT-AAACACTACA 3' Rbx1 mmu-miR-143 beg:262 end:283 pic:3' CTCGATGTCACGAAGTAGAGT 5'& .|| | |||||||. &5' -GGCCCATG-GGTTCATCTT- 3' Rbx1 mmu-miR-143 beg:418 end:440 pic:3' CTCGATG-TCACGAAGTAGAGT 5'& ||| ||| .||||||||| &5' --GCTCTGAGT-TTTCATCTCA 3' Rbx1 mmu-miR-145star beg:1003 end:1023 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||| |||||.| &5' ----AACATGCCGGCCAGGGA- 3' Rbx1 mmu-miR-145star beg:469 end:486 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||. |||||| &5' -------AGTGGGCACAGGAA- 3' Rbx1 mmu-miR-145star beg:681 end:705 pic:3' GTTCTTGTCATAA-AGGTCCTTA 5'& |||| |||||||. &5' -AAGATCCTTTGAGTCCAGGAG- 3' Rbx1 mmu-miR-146a beg:1212 end:1237 pic:3' TTGGGTACCTTAAGT-CAAGAGT 5'& ||. | || |||| |||.||| &5' AATGC-TGTCATTCTTGTTTTCA 3' Rbx1 mmu-miR-146b beg:1216 end:1237 pic:3' TCGGATACCTTAAGT-CAAGAGT 5'& ||. |||| |||.||| &5' -GCTGTC---ATTCTTGTTTTCA 3' Rbx1 mmu-miR-15a beg:1068 end:1087 pic:3' GTGTTTGGTAATACACGACGAT 5'& |||.|| ||.||||. &5' -----ACCGTTTC-TGTTGCTG 3' Rbx1 mmu-miR-15b beg:1068 end:1087 pic:3' ACATTTGGTACTACACGACGAT 5'& |||.| ||.||||. &5' -----ACCGTTTC-TGTTGCTG 3' Rbx1 mmu-miR-16 beg:1067 end:1087 pic:3' GCGGTTATAAATGCACGACGAT 5'& || .||| | ||.||||. &5' ---CACCGTTT-C-TGTTGCTG 3' Rbx1 mmu-miR-182 beg:984 end:998 pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& |..|||||||| &5' --------------CTGTTGCCAAA 3' Rbx1 mmu-miR-184 beg:338 end:357 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |||| ||| |||.|||. &5' -CCCTC--CAG--CTCTGTCT- 3' Rbx1 mmu-miR-184 beg:225 end:248 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& .||. | ||| |||.||.| &5' GCCTCAAGAAGTGCTCTGTTC- 3' Rbx1 mmu-miR-1904 beg:1171 end:1193 pic:3' GGAGGGA---GGTCTCCTCGTCTTG 5'& ||.|. .|| ||||||| &5' -CTTCTGTTGTCA----AGCAGAA- 3' Rbx1 mmu-miR-1928 beg:1080 end:1103 pic:3' CTCG--ACCGT---TACATCGA 5'& || |||. ||||||.| &5' --GCTGTGGTTTTCATGTAGTT 3' Rbx1 mmu-miR-1928 beg:586 end:604 pic:3' CTCGACCGTTACATCGA 5'& .||||||||| ||. &5' -GGCTGGCAATAAAGT- 3' Rbx1 mmu-miR-1934 beg:901 end:923 pic:3' TCTCCTGCTTCGTCCCCTGGTCT 5'& .||| ||.||||| |||| &5' GGAGCCAGAGGCAGG----CAGA 3' Rbx1 mmu-miR-1935 beg:339 end:357 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& || |||| |||||.|| &5' ------CCTCCAG-CTCTGTCT 3' Rbx1 mmu-miR-193star beg:752 end:772 pic:3' AGTAGAACGGG-CGT--TTCTGGGT 5'& ||.| || |||.||| &5' -------GCTCAGCTGTAAGGCCC- 3' Rbx1 mmu-miR-1941-5p beg:338 end:361 pic:3' TTCGGAGACATGGTCG---TAGAGGGA 5'& || || ||||| .|||.||| &5' ---CCCCT---CCAGCTCTGTCTTCCT 3' Rbx1 mmu-miR-194 beg:22 end:36 pic:3' AGGTGTACCTCAACGACAATGT 5'& |||. ||||||| &5' -CCAT---------CTGTTAC- 3' Rbx1 mmu-miR-1956 beg:388 end:410 pic:3' AGGCGACTGA----GTCGGGACCTGA 5'& || |||||.||||| &5' ------GAACATGGCAGCCTTGGAC- 3' Rbx1 mmu-miR-1957 beg:1147 end:1163 pic:3' CAGTATACGAG---ATGGTGAC 5'& ||| |.||||| &5' --------CTCCGGTGCCACT- 3' Rbx1 mmu-miR-1961 beg:1150 end:1169 pic:3' AAGAT-TGATGATGGAGT 5'& | .| |||||.||| &5' --CGGTGCCACTACTTCA 3' Rbx1 mmu-miR-196astar beg:1071 end:1087 pic:3' AGTCCGTCAAAGAACAACGGCT 5'& ||||| ||||||.| &5' -------GTTTC-TGTTGCTG- 3' Rbx1 mmu-miR-196astar beg:158 end:175 pic:3' AGTCCGTCAAAGAACAACGGCT 5'& || .|| |||||.| &5' ---GGAGGTG----GTTGCTG- 3' Rbx1 mmu-miR-1971 beg:137 end:157 pic:3' AGAGTCGGG-----TCGGAAATG 5'& |.| |||||||| &5' -----GTCAAATAAAGCCTTTA- 3' Rbx1 mmu-miR-1971 beg:928 end:945 pic:3' AGAGTCGGGTCGGAAATG 5'& |.| || ||||||| &5' TTTGAGGCCAGCCT---- 3' Rbx1 mmu-miR-1981 beg:133 end:157 pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& . .||| |||||||| &5' -TTGTGTCAAATAA-AGCCTTTA- 3' Rbx1 mmu-miR-19a beg:627 end:649 pic:3' AGTCAAAACGTATCT---AAACGTGT 5'& ||. |.|| ||||||.| &5' -------TGTTTGGACAGTTTGCATA 3' Rbx1 mmu-miR-19b beg:628 end:649 pic:3' AGTCAAAACGTACCT---AAACGTGT 5'& ||. |||| ||||||.| &5' -------TGTTTGGACAGTTTGCATA 3' Rbx1 mmu-miR-200cstar beg:496 end:519 pic:3' GGTTTGTGACGACCCATTCTGC 5'& |.||||||| | |||| || | &5' CTAAACACTACAGGGTTAG-C- 3' Rbx1 mmu-miR-2135 beg:688 end:710 pic:3' CAAAGC-CGGGG-TTCTGGAGA 5'& ||.| |.|| .||||||. &5' --TTTGAGTCCAGGAGACCTT- 3' Rbx1 mmu-miR-2140 beg:405 end:426 pic:3' TGGT-GGTTCTAGACGTGGA 5'& |||| || ||.||||| |. &5' ACCAGCC-AGGTCTGCTCT- 3' Rbx1 mmu-miR-2140 beg:1058 end:1074 pic:3' TGGTGGTTCTAGACGTGGA 5'& |.|||.||| |||| &5' -CTACCGAGA----CACC- 3' Rbx1 mmu-miR-2145 beg:408 end:427 pic:3' TTGGTCCGGGCTGGGACGA 5'& |.|||||.|.| |.||| &5' AGCCAGGTCTG-CTCTG-- 3' Rbx1 mmu-miR-2146 beg:327 end:348 pic:3' GTGTACC-TTGGGAAGAGGTG 5'& ||| ||| ||||| ||||| &5' CACCTGGAAACCC--CTCCA- 3' Rbx1 mmu-miR-2146 beg:698 end:717 pic:3' GTGTACCT-TGGGA-AGAGGTG 5'& ||| |||.| |.||.| &5' -----GGAGACCTTGTTTCTA- 3' Rbx1 mmu-miR-214star beg:901 end:921 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& . ||| || ||.|||||| &5' --GGAGCCAG---AGGCAGGCA 3' Rbx1 mmu-miR-219 beg:624 end:643 pic:3' TCTTAAC-GCAAACCTGTTAGT 5'& || .|||||||||.|. &5' -----TGATGTTTGGACAGTT- 3' Rbx1 mmu-miR-221 beg:1083 end:1103 pic:3' CTTTGGGTCGTCTGT--TACATCGA 5'& | | ||||||.| &5' --------GTGGTTTTCATGTAGTT 3' Rbx1 mmu-miR-223 beg:454 end:469 pic:3' ACCCCATAAACTGTTTGACTGT 5'& || .||||.|| &5' ----------GAGTGACTGGCA 3' Rbx1 mmu-miR-224 beg:28 end:50 pic:3' TTGCCTTG-GT-GATCACTGAAT 5'& | || |. |||||||||| &5' ---GTTACTCGTCTAGTGACTT- 3' Rbx1 mmu-miR-22star beg:374 end:395 pic:3' ATTTCGAACGGTGA-CTTCTTGA 5'& |.|| | ||||||| &5' --AGGCAGGAATGAGGAAGAAC- 3' Rbx1 mmu-miR-23a beg:1192 end:1212 pic:3' CCTTTAGGGACCGTTACACTA 5'& |.||. | ||||||| &5' --AGATTGCAAA-AATGTGA- 3' Rbx1 mmu-miR-26a beg:653 end:675 pic:3' TCGGATAGGACCTAATGAACTT 5'& |. |||| |. ||||||.| &5' -GTA-ATCCCAGG-TACTTGGA 3' Rbx1 mmu-miR-26b beg:656 end:675 pic:3' TGGATAGGACTTAATGAACTT 5'& |||| ||||||.| &5' ----ATCCCAGG-TACTTGGA 3' Rbx1 mmu-miR-27a beg:508 end:531 pic:3' CGCCTTGAA-TCGGTGACACTT 5'& ||. ||. |||||||| &5' --GGGTTAGCAGTGACTGTGAA 3' Rbx1 mmu-miR-27b beg:508 end:531 pic:3' CGTCTTGAA--TCGGTGACACTT 5'& ||| .| ||. |||||||| &5' -CAGGGTTAGCAGTGACTGTGAA 3' Rbx1 mmu-miR-2861 beg:398 end:421 pic:3' GGCGGG--C-GG-CGGTCCGGGG 5'& |||. | || ||||||.|. &5' --GCCTTGGACCAGCCAGGTCT- 3' Rbx1 mmu-miR-293star beg:717 end:738 pic:3' GTTTTACAGTGTGTCAAACTCA 5'& ||.|| || .||||||.| &5' CAGAAATTC---TAGTTTGGG- 3' Rbx1 mmu-miR-29bstar beg:895 end:912 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& |||. |.|.|||| &5' -----CACTTG--GGAGCCAG- 3' Rbx1 mmu-miR-29bstar beg:201 end:212 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& |.|.|||| &5' -------------GGAGCCAG- 3' Rbx1 mmu-miR-302bstar beg:144 end:165 pic:3' TCTTTCGTAAGGGTACAATTTCA 5'& ||||| ||. |||..|| &5' --AAAGCCTTTAA--GTTGGAG- 3' Rbx1 mmu-miR-30a beg:628 end:647 pic:3' GAAGGTCAGCTCCTA-CAAATGT 5'& ||. ||| ||||.|| &5' ------GTTT-GGACAGTTTGCA 3' Rbx1 mmu-miR-30astar beg:181 end:203 pic:3' CGACGTTTGTAGGCT-GACTTTC 5'& || .| | .|| ||||.| &5' --TGTGGAGAG-TGATCTGAGA- 3' Rbx1 mmu-miR-30astar beg:348 end:368 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& |||. ||| ||||.| &5' -CTGTCT---TCCTTCTGAGA- 3' Rbx1 mmu-miR-30b beg:623 end:647 pic:3' TCGACTCACAT-CCTA-CAAATGT 5'& |||| ||| ||| ||||.|| &5' --CTGA-TGTTTGGACAGTTTGCA 3' Rbx1 mmu-miR-30estar beg:181 end:203 pic:3' CGACATTTGTAGGCT-GACTTTC 5'& |||..| | .|| ||||.| &5' --TGTGGAGAG-TGATCTGAGA- 3' Rbx1 mmu-miR-32 beg:571 end:586 pic:3' ACGTTGAATCATTACACGTTAT 5'& ||| ||||.||| &5' ---------GTACTGTGTAAT- 3' Rbx1 mmu-miR-322star beg:1076 end:1099 pic:3' CACAACGTCGC--GAAGTACAAA 5'& |||||| |.| .||||||| &5' -TGTTGCTGTGGTTTTCATGT-- 3' Rbx1 mmu-miR-324-3p beg:854 end:876 pic:3' TC-GTCGTGGACCCCGTCACC 5'& .| ||| .|| |||||||| &5' GGCCAGGGCCA--GGCAGTGG 3' Rbx1 mmu-miR-328 beg:956 end:975 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||| || |||||.| &5' -----AGGACAACCAGGGCTA- 3' Rbx1 mmu-miR-331-3p beg:726 end:747 pic:3' AAGATCCTA-TCCGGGTCCCCG 5'& ||||| .||.|.||||| &5' -TCTAGTTTGGGGTCTAGGGG- 3' Rbx1 mmu-miR-335-5p beg:81 end:106 pic:3' TGTAAAAAGCAAT--AACGAGAACT 5'& ||||||||| |||.|.|||. &5' ---TTTTTCGTTCCTTTGTTTTTGG 3' Rbx1 mmu-miR-338-3p beg:1025 end:1046 pic:3' GTTGTTT-TAGTGACTACGACCT 5'& |.|.. ||| |||||||||| &5' -AGCGGCCATC-CTGATGCTGG- 3' Rbx1 mmu-miR-340-5p beg:477 end:496 pic:3' TTAGTCAGAGTAACGAAATATT 5'& ||| |||||.||| &5' ---CAGGAAG---GCTTTGTAA 3' Rbx1 mmu-miR-345-3p beg:1031 end:1051 pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& ||| || . ||.|||||| &5' ---TCCTGA-TGCTGGTTCAG- 3' Rbx1 mmu-miR-3470a beg:935 end:954 pic:3' GGTCGGACCAGATGTTTCACT 5'& ||||||| |||.||||| &5' CCAGCCT-----ACAGAGTGA 3' Rbx1 mmu-miR-3470b beg:175 end:196 pic:3' GGT-CGGACCAGATGTCTCACT 5'& || |. | |. ||||||| &5' -CATGTA---TGTGGAGAGTGA 3' Rbx1 mmu-miR-3474 beg:650 end:667 pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& || .|| ||||||| &5' ----CC-TGTAA--TCCCAGG- 3' Rbx1 mmu-miR-363 beg:571 end:586 pic:3' ATGTCTACCTATGGCACGTTAA 5'& .|||.|||.||| &5' ---------GTACTGTGTAAT- 3' Rbx1 mmu-miR-374star beg:526 end:542 pic:3' GAGCCTGTTACTATTATGTTGG 5'& ||||| ||.||.| &5' -------AATGAC-ATGCAGC- 3' Rbx1 mmu-miR-375 beg:536 end:557 pic:3' AGTGCGCTCGGCTTG---CTTGTTT 5'& || ||| ||||||| &5' ----GC-AGCAATCTCTAGAACAAA 3' Rbx1 mmu-miR-378 beg:683 end:702 pic:3' GGAAGACT--GAGGTTCAGGTCA 5'& || ||. ||||||| &5' ------GATCCTTTGAGTCCAG- 3' Rbx1 mmu-miR-378star beg:288 end:317 pic:3' TGTG-TCC-TGGAC---CTCAGTCCTC 5'& ||| ||| ||||| |||||.|||| &5' -CACGAGGAACCTGTCAGAGTCGGGAG 3' Rbx1 mmu-miR-411star beg:631 end:649 pic:3' CCAATCACCTGGCACAATGTAT 5'& ||||| || ||.|||| &5' ------TGGACAGT-TTGCATA 3' Rbx1 mmu-miR-431 beg:945 end:965 pic:3' ACGTACTGCCGGACGTTCTGT 5'& | .||| |..| ||.|||| &5' -GAGTGA--GTTT-CAGGACA 3' Rbx1 mmu-miR-450b-5p beg:1185 end:1206 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||| || |.||||||| &5' ----CAGAAAAAGATTGCAAAA 3' Rbx1 mmu-miR-452 beg:831 end:853 pic:3' CAGAG-TCAAAGGAGACGTTTGT 5'& ||. |||||.||. .||||| &5' --CTTAAGTTTTCTT--TAAACA 3' Rbx1 mmu-miR-452 beg:477 end:498 pic:3' CAGAGTCAAAG-GAGACGTTTGT 5'& ||| ||.||.|||| &5' ----CAGGAAGGCTTTGTAAAC- 3' Rbx1 mmu-miR-453 beg:210 end:231 pic:3' ACGTTCGAGTGATACTCCGTTGGA 5'& | |||| || |||||.||| &5' -GAAAGC-CAGAA--AGGCAGCCT 3' Rbx1 mmu-miR-453 beg:384 end:405 pic:3' ACGTTCGAGTGATACTCCGTTGGA 5'& | ||| ||. ||||.||| &5' -GGAAGAACAT-----GGCAGCCT 3' Rbx1 mmu-miR-467a beg:641 end:672 pic:3' GCGTATATGT--AC------GTCCGTGAAT 5'& |||||||.. || ||||.||||. &5' -GCATATATGCCTGTAATCCCAGGTACTTG 3' Rbx1 mmu-miR-467b beg:652 end:673 pic:3' GTATATGTACGTCCGTGAATG 5'& |.|| ||||.||||. &5' --TGTAATCCCAGGTACTTG- 3' Rbx1 mmu-miR-469 beg:900 end:917 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& || .|| ||||||| &5' GGGAGCC------------AGAGGCA 3' Rbx1 mmu-miR-470 beg:686 end:705 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& || || ||||||.||. &5' -----CCTTTG--AGTCCAGGAG 3' Rbx1 mmu-miR-470 beg:1005 end:1023 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& || ||||.| |||.|.| &5' ------CA-TGCCGG-CCAGGGA 3' Rbx1 mmu-miR-491 beg:0 end:16 pic:3' GGAGTACCTTCCCAAGGGGTGA 5'& | ||| ||.|||.| &5' ------GAAAGACTTTCCCGC- 3' Rbx1 mmu-miR-497 beg:1067 end:1087 pic:3' ATGTTTGGTGTCAC--ACGACGAC 5'& ||| || ||.||||| &5' -------CACCGTTTCTGTTGCTG 3' Rbx1 mmu-miR-499 beg:1105 end:1126 pic:3' TTTGTAGTGACG--TTCAGAATT 5'& ||| || |.|||||.| &5' ----ATC-CTACAAAGGTCTTGA 3' Rbx1 mmu-miR-500 beg:862 end:884 pic:3' ACTTGGGAACGGGT---CCACGTAA 5'& ..|| || ||||||| &5' --GGCCAG-GCAGTGGTGGTGCAT- 3' Rbx1 mmu-miR-504 beg:506 end:516 pic:3' CTATCTCACGTCTGGTCCCAGA 5'& ||||||. &5' --------------CAGGGTT- 3' Rbx1 mmu-miR-509-5p beg:87 end:109 pic:3' TACTAACGGTGT----AAGACCTCAT 5'& |. | ||.|||||| &5' ------GTTCCTTTGTTTTTGGAGT- 3' Rbx1 mmu-miR-511 beg:206 end:227 pic:3' ACTCAC-GTCT--CG--TTTTCCGTA 5'& | |||| || .||||||| &5' -----GCCAGAAAGCCAGAAAGGCA- 3' Rbx1 mmu-miR-511 beg:901 end:917 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& .|||| |.||||| &5' -------GGAGCCAGAGGCA- 3' Rbx1 mmu-miR-540-3p beg:695 end:716 pic:3' GGTCCTAGCTGGAGACTGGA 5'& |||||| |||||. .|| &5' CCAGGA--GACCTTGTTTCT 3' Rbx1 mmu-miR-541 beg:517 end:549 pic:3' TCACACTGG------TTGTA-GTC-TTAGGGAA 5'& |||||. .|||| ||| ||||.|| &5' ---GTGACTGTGAATGACATGCAGCAATCTCT- 3' Rbx1 mmu-miR-542-3p beg:22 end:36 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& | ||||||.|| &5' ----------CCATCTGTTAC- 3' Rbx1 mmu-miR-542-3p beg:1211 end:1226 pic:3' AAAGTCAATAGTTA-GACAGTGT 5'& |||| ||||||. &5' ----------CAATGCTGTCAT- 3' Rbx1 mmu-miR-546 beg:1147 end:1164 pic:3' CTGAGG-CACGGTGGTA 5'& |||| |||||||.| &5' --CTCCGGTGCCACTA- 3' Rbx1 mmu-miR-582-3p beg:1089 end:1108 pic:3' AACCCAAGT-CAACAAGTTGTCC 5'& |||| || |.||||| &5' -----TTCATGTAG-TTAACAG- 3' Rbx1 mmu-miR-669h-5p beg:521 end:540 pic:3' CGTGAGTTGATATGTGG-GTACGTA 5'& .|||.|. |||||| &5' ------GACTGTGAATGACATGCA- 3' Rbx1 mmu-miR-670 beg:1004 end:1023 pic:3' AAGTGGTGTATG--TGAGTCCCTA 5'& ||||.| .| |||||| &5' ------ACATGCCGGC-CAGGGA- 3' Rbx1 mmu-miR-672 beg:212 end:232 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& .| ||| . ||.||||| &5' ----GC-CAGAAAGGCAGCCTCA 3' Rbx1 mmu-miR-673-3p beg:387 end:409 pic:3' CCACGTGTCTTGA---GTCGGGGCCT 5'& ||||| |||||..||| &5' -------AGAACATGGCAGCCTTGGA 3' Rbx1 mmu-miR-673-5p beg:508 end:530 pic:3' GAGGTTCC--TGGTCTC-GACACTC 5'& ||.|| | ||| | |||||| &5' ---CAGGGTTAGCAGTGACTGTGA- 3' Rbx1 mmu-miR-674 beg:1032 end:1053 pic:3' ATGTGGTG-AGGGTAGAGTCACG 5'& || | |. .|||||| &5' ----CCTGATGCTGGTTCAGTG- 3' Rbx1 mmu-miR-676star beg:171 end:191 pic:3' CGTTCAGGATTCCAACATCTCA 5'& ||. | | |||.||| &5' ----GTTTCATGTATGTGGAG- 3' Rbx1 mmu-miR-709 beg:339 end:359 pic:3' AGGAGGACGGAGACGGAGG 5'& ||||| | |||||.||.| &5' -CCTCCAG-CTCTGTCTTC 3' Rbx1 mmu-miR-713 beg:1080 end:1100 pic:3' CGACACACGGAAGTCACGT 5'& |||||| |..|||| ||.| &5' GCTGTG-GTTTTCA-TGTA 3' Rbx1 mmu-miR-742 beg:1080 end:1095 pic:3' AAATGGGTCGTACCACCGAAAG 5'& || ||||.|||| &5' --------GCT--GTGGTTTTC 3' Rbx1 mmu-miR-744star beg:584 end:600 pic:3' TCCAACTCCAATC-ACCGTTGTC 5'& ||.| ||||||.| &5' ---------TTGGCTGGCAATA- 3' Rbx1 mmu-miR-758 beg:268 end:297 pic:3' ATCACCTGG----------TCCAGTGTTT 5'& ||| . |||||||.|. &5' ---TGGGTTCATCTTCACAAGGTCACGAG 3' Rbx1 mmu-miR-760 beg:848 end:867 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& | .| |. ||||.||| &5' --CATGCTGG-CCAGGGCC- 3' Rbx1 mmu-miR-761 beg:981 end:994 pic:3' ACACAGTCAAAGTGGGACGACG 5'& ||||||.||| &5' ------------ACCCTGTTGC 3' Rbx1 mmu-miR-764-5p beg:462 end:481 pic:3' TCCTCCTGTA---CACTCGTGG 5'& |.||| |||.|||| &5' -----GGCATCAAGTGGGCAC- 3' Rbx1 mmu-miR-767 beg:861 end:883 pic:3' ACGAGTCTGTTGGTACCACGT 5'& || |||.||. .||||||| &5' -GC-CAGGCAGTGGTGGTGCA 3' Rbx1 mmu-miR-767 beg:951 end:973 pic:3' ACGAG--TCTGTTGGTACCACGT 5'& |.|. .|||||||| || || &5' -GTTTCAGGACAACCA-GG-GC- 3' Rbx1 mmu-miR-770-5p beg:862 end:882 pic:3' GCACCGGGTCTGTG--CACCACGA 5'& || ||||.|| ||||||| &5' ---GG-CCAGGCAGTGGTGGTGC- 3' Rbx1 mmu-miR-7a beg:1163 end:1179 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||| ||||||. &5' ---------TCAACTGTCTTCT- 3' Rbx1 mmu-miR-7b beg:1163 end:1179 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||| ||||||. &5' ---------TCAACTGTCTTCT- 3' Rbx1 mmu-miR-7b beg:1135 end:1147 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& .|||.|||| &5' -------------GAGTTTTCC- 3' Rbx1 mmu-miR-802 beg:1071 end:1087 pic:3' TTCCTACTTAGAAACAATGACT 5'& .|.| ||||.||| &5' --------GTTTCTGTTGCTG- 3' Rbx1 mmu-miR-871 beg:910 end:931 pic:3' GTACTGACCGTGATTAGACTTAT 5'& |.| |||| |||||.| &5' ---GGCAGGCAGATTTCTGAGT- 3' Rbx1 mmu-miR-871 beg:413 end:430 pic:3' GTACTGACCGTGATTAGACTTAT 5'& ||. ||. |||||.| &5' -------GGT-CTGCTCTGAGT- 3' Rbx1 mmu-miR-876-3p beg:1151 end:1164 pic:3' ACTTAATGAAACATTTGGTGAT 5'& | .|||||| &5' -----------GGT-GCCACTA 3' Rbx1 mmu-miR-669i beg:637 end:654 pic:3' CATACGTACACACATATACGT 5'& || |||| ||||||| &5' GTTTGCA------TATATGC- 3' Rbx1 mmu-miR-669j beg:637 end:654 pic:3' ACAAACGTACACTCATATACGT 5'& ||||||| ||||||| &5' -GTTTGCA------TATATGC- 3' Rbx1 mmu-miR-150 beg:892 end:908 pic:3' GTGACCATGTTCCCAACCCTCT 5'& ||| ||||||| &5' --------CAACACTTGGGAG- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rbx1 RAID00095838 mmu-miR-23b-3p miRNA MIMAT0000125 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID00133454 mmu-miR-292a-5p miRNA MIMAT0000369 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID00141699 mmu-miR-290a-5p miRNA MIMAT0000366 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID00409647 mmu-miR-374b-5p miRNA MIMAT0003727 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID00452169 mmu-miR-425-5p miRNA MIMAT0004750 Rbx1 mRNA 56438 CLIP-seq//Prediction 0.6308 Rbx1 RAID00589890 mmu-miR-182-5p miRNA MIMAT0000211 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID00707697 mmu-miR-377-3p miRNA MIMAT0000741 Rbx1 mRNA 56438 CLIP-seq//Prediction 0.6308 Rbx1 RAID00739016 mmu-miR-378a-3p miRNA MIMAT0003151 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID00853626 mmu-miR-149-5p miRNA MIMAT0000159 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID00898425 mmu-miR-143-3p miRNA MIMAT0000247 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID00912376 mmu-miR-129-5p miRNA MIMAT0000209 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID01103463 mmu-miR-376b-3p miRNA MIMAT0001092 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID01555502 mmu-miR-485-5p miRNA MIMAT0003128 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID01605628 mmu-miR-10a-5p miRNA MIMAT0000648 Rbx1 mRNA 56438 Prediction 0.2202 Rbx1 RAID01685625 mmu-miR-140-5p miRNA MIMAT0000151 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID01768459 mmu-miR-7a-5p miRNA MIMAT0000677 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID01788403 mmu-miR-142a-3p miRNA MIMAT0000155 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID01974828 mmu-miR-23a-3p miRNA MIMAT0000532 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID02009666 mmu-miR-7054-3p miRNA MIMAT0028013 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID02056613 mmu-miR-1981-5p miRNA MIMAT0009458 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID02082925 mmu-miR-101b-3p miRNA MIMAT0000616 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID02101918 mmu-miR-590-3p miRNA MIMAT0004896 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID02138017 mmu-miR-29a-3p miRNA MIMAT0000535 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID02335889 mmu-miR-125a-3p miRNA MIMAT0004528 Rbx1 mRNA 56438 Prediction 0.2202 Rbx1 RAID02421752 mmu-miR-135b-5p miRNA MIMAT0000612 Rbx1 mRNA 56438 CLIP-seq 0.5483 Rbx1 RAID02567548 mmu-miR-1971 miRNA MIMAT0009446 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID02791670 mmu-miR-10b-5p miRNA MIMAT0000208 Rbx1 mRNA 56438 Prediction 0.2202 Rbx1 RAID02860562 mmu-miR-7b-5p miRNA MIMAT0000678 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID02967962 mmu-miR-27b-3p miRNA MIMAT0000126 Rbx1 mRNA 56438 Prediction 0.2202 Rbx1 RAID02971251 mmu-miR-489-3p miRNA MIMAT0003112 Rbx1 mRNA 56438 CLIP-seq//Prediction 0.6308 Rbx1 RAID03083667 mmu-miR-466n-3p miRNA MIMAT0014894 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID03119657 mmu-miR-135a-5p miRNA MIMAT0000147 Rbx1 mRNA 56438 CLIP-seq 0.5483 Rbx1 RAID03162799 mmu-miR-194-5p miRNA MIMAT0000224 Rbx1 mRNA 56438 Prediction 0.2202 Rbx1 RAID03191133 mmu-miR-338-3p miRNA MIMAT0000582 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID03256416 mmu-miR-224-5p miRNA MIMAT0000671 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID03351273 mmu-miR-27a-3p miRNA MIMAT0000537 Rbx1 mRNA 56438 Prediction 0.2202 Rbx1 RAID03363124 mmu-miR-7663-5p miRNA MIMAT0029832 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID03449495 mmu-miR-876-5p miRNA MIMAT0004854 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID03621172 mmu-miR-7649-5p miRNA MIMAT0029800 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID03882729 mmu-miR-6896-5p miRNA MIMAT0027692 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID03887576 mmu-miR-7680-3p miRNA MIMAT0029875 Rbx1 mRNA 56438 Prediction 0.1828 Rbx1 RAID04029135 mmu-miR-101a-3p miRNA MIMAT0000133 Rbx1 mRNA 56438 Prediction 0.1828