DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT012999 mmu-miR-297a-5p Mus musculus Sharpin 106025 Mus musculus Sequencing Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000375 mmu-miR-297a 106025 Sharpin uguacgUGUACGUG-UGUAUGUa ||| | :| ||||||| uaaacaACAGGGGCUACAUACAa 2 17 108 130 [mm9:15:76177498-76177520:-] 0.5188 151 7 -13.31 -0.6548 MIMAT0004759 mmu-miR-466a-5p 106025 Sharpin auaCAUGUACAUGUGUGUGUAu ||| || || | |||||| cuaGUA-AU-UAAAGACACAUa 2 20 132 151 [mm9:15:76177477-76177496:-] 0.5188 127 6 -10.78 -0.1322 MIMAT0003166 mmu-miR-546 106025 Sharpin cugaggcaCGGUGGUa ||||||| ------aaGCCACCAa 2 9 1 10 [mm9:15:76177691-76177700:-] 0.5615 140 7 -12.80 -0.7192 MIMAT0003895 mmu-miR-764-3p 106025 Sharpin ugucaacggUGAUACC-GGAGGa | ||||| ||||| guuacagagAAUAUGGCCCUCCu 2 14 13 35 [mm9:15:76177593-76177615:-] 0.5382 121 0 -20.96 -0.2203 MIMAT0003457 mmu-miR-680 106025 Sharpin ggggguaCAGUCGUCUACGGg | ||| ||||||| uguugggGACAG-AGAUGCCa 2 15 84 103 [mm9:15:76177525-76177544:-] 0.5188 148 7 -16.77 -0.2325 MIMAT0003479 mmu-miR-669c 106025 Sharpin ugUGU-GUAGGUGUGUGUU-GAUa ||| : |:|||:|||| ||| caACAGGGGCUACAUACAAGCUAg 2 21 112 135 [mm9:15:76177493-76177516:-] 0.5188 127 0 -18.21 -1.0992 MIMAT0003480 mmu-miR-297b-5p 106025 Sharpin uguacaaGUACGUG-UGUAUGUa || | :| ||||||| uaaacaaCAGGGGCUACAUACAa 2 16 108 130 [mm9:15:76177498-76177520:-] 0.5188 146 7 -12.17 -0.6622 MIMAT0003488 mmu-miR-698 106025 Sharpin ucccUUCCUUUG-CUCUUAc |||| || |||||| accaAAGGUUACAGAGAAUa 2 16 6 25 [mm9:15:76177603-76177615,76177689-76177695:-] 0.5498 123 6 -13.50 -0.2566 MIMAT0004865 mmu-miR-297c 106025 Sharpin uguacaUGUACGUG-UGUAUGUa ||| | :| ||||||| uaaacaACAGGGGCUACAUACAa 2 17 108 130 [mm9:15:76177498-76177520:-] 0.5188 151 7 -13.31 -0.6548 MIMAT0004875 mmu-miR-466b-5p 106025 Sharpin guaCAUGUACAUGUGUGUGUAg ||| || || | |||||| cuaGUA-AU-UAAAGACACAUa 2 20 132 151 [mm9:15:76177477-76177496:-] 0.5188 127 6 -9.76 -0.1322 MIMAT0004877 mmu-miR-466c-5p 106025 Sharpin auaCAUGUACGUGUGUGUGUAg ||| || :| | |||||| cuaGUA-AU-UAAAGACACAUa 2 20 132 151 [mm9:15:76177477-76177496:-] 0.5188 123 6 -10.86 -0.1322 MIMAT0004879 mmu-miR-466e-5p 106025 Sharpin auaCAUGUACAUGUGUGUGUAg ||| || || | |||||| cuaGUA-AU-UAAAGACACAUa 2 20 132 151 [mm9:15:76177477-76177496:-] 0.5188 127 6 -9.76 -0.1322 MIMAT0005837 mmu-miR-1187 106025 Sharpin aauguguguaugugugUGUGUAu |||||| aagcuaguaauuaaagACACAUa 2 8 129 151 [mm9:15:76177477-76177499:-] 0.5188 120 6 -8.47 -0.1309 MIMAT0005859 mmu-miR-1198 106025 Sharpin ggUUCGGUC---GGUCCUUGUGUAu ||||:|| ::| :|||||| acAAGCUAGUAAUUAAAGACACAUa 2 21 127 151 [mm9:15:76177477-76177501:-] 0.5188 139 6 -21.70 -0.1348 MIMAT0007880 mmu-miR-1901 106025 Sharpin ccugggggcccucAUGCUCGcc ||||||| aauuaaagacacaUACGAGCca 3 10 137 158 [mm9:15:76177470-76177491:-] 0.5188 125 0 -11.93 -0.2429 MIMAT0013803 mmu-miR-2861 106025 Sharpin ggCGGGCGG-CG--GUCCGGGg |||| || |: ||||||| ugGCCCUCCUGUCACAGGCCCa 2 18 26 47 [mm9:15:76177581-76177602:-] 0.5382 151 7 -29.34 -0.8064 MIMAT0000142 mmu-miR-9 106025 Sharpin aguaugucgaucuauUGGUUUCu ||||||| ----------aagccACCAAAGg 2 9 1 13 [mm9:15:76177615-76177615,76177689-76177700:-] 0.5498 140 7 -10.74 -0.5254 MIMAT0000153 mmu-miR-141 106025 Sharpin gguagaaaugguCUGUCACAAu | ||||||| ggggacagagauGCCAGUGUUa 2 11 88 109 [mm9:15:76177519-76177540:-] 0.5188 142 7 -14.27 -0.5506 MIMAT0000159 mmu-miR-149 106025 Sharpin cccUCACUUCUGUG---CCUCGGUcu | | ||||||| |||||| guaAUUAAAGACACAUACGAGCCA-- 3 21 135 158 [mm9:15:76177470-76177493:-] 0.5188 139 0 -17.27 -0.1189 MIMAT0000159 mmu-miR-149 106025 Sharpin cccucACUUCUGUGCCU-CGGUCu ||::|||| || ||||| cuuguUGGGGACAGAGAUGCCAGu 2 19 82 105 [mm9:15:76177523-76177546:-] 0.5188 130 0 -21.43 -0.4183 MIMAT0000519 mmu-miR-200a 106025 Sharpin uguagcaaugguCUGUCACAAu | ||||||| ggggacagagauGCCAGUGUUa 2 11 88 109 [mm9:15:76177519-76177540:-] 0.5188 142 7 -14.32 -0.5470 MIMAT0003172 mmu-miR-542-3p 106025 Sharpin aaagucaauaguuaGACAGUGu ||||||| agaauauggcccucCUGUCACa 2 9 20 41 [mm9:15:76177587-76177608:-] 0.5382 140 7 -12.88 -0.3074

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G069512 Sharpin Mus musculus 106025

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Sharpin mmu-miR-297c beg:111 end:130 pic:3' TGTACATGTA--CGTGTGTATGTA 5'& ||| || .||||||| &5' ------ACAGGGGC-TACATACA- 3' Sharpin mmu-miR-680 beg:90 end:103 pic:3' GGGGGTACAGTCGTCTACGGG 5'& ||| ||||||| &5' ---------CAG-AGATGCC- 3' Sharpin mmu-miR-2861 beg:28 end:47 pic:3' GGCGGGCGGCGGTCCGGGG 5'& || ||.|.| ||||||| &5' CCTCCTGTCA-CAGGCCC- 3' Sharpin mmu-miR-141 beg:90 end:110 pic:3' GGTAGAAATGGTCT-----GTCACAAT 5'& |||| |||||||| &5' ----------CAGAGATGCCAGTGTTA 3' Sharpin mmu-miR-200a beg:90 end:110 pic:3' TGTAGCAATGGTCT-----GTCACAAT 5'& |||| |||||||| &5' ----------CAGAGATGCCAGTGTTA 3' Sharpin mmu-miR-542-3p beg:31 end:42 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& |||||||| &5' --------------CTGTCACA 3' Sharpin mmu-miR-546 beg:0 end:10 pic:3' CTGAGGCACGGTGGTA 5'& ||||||| &5' --------GCCACCA- 3' Sharpin mmu-let-7i beg:120 end:142 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& ||| .||||.||| || |.| &5' -ACA-TACAAGCTAGTAA-TTA 3' Sharpin mmu-miR-1198 beg:129 end:152 pic:3' GGTTCGGTCGGTCC---TTGTGTAT 5'& |||.||. .||||||| &5' ---AGCTAGTAATTAAAGACACATA 3' Sharpin mmu-miR-1896 beg:1 end:23 pic:3' GAGGAGTGGGTGGTA------GTCTCTC 5'& |||||| |||||| &5' --------CCACCAAAGGTTACAGAGA- 3' Sharpin mmu-miR-1954 beg:55 end:72 pic:3' TTGTCCCAGAG--TGAGACGTCA 5'& ||. |||.||||| &5' --------CTTGAACTTTGCAG- 3' Sharpin mmu-miR-26a beg:42 end:64 pic:3' TCGGATAGGACCTAATGAACTT 5'& ||| || ||||||| &5' -GCCCAACCACCACCACTTGAA 3' Sharpin mmu-miR-546 beg:39 end:55 pic:3' CTGAGGCACGGTGGTA 5'& |.| || |||||| &5' GGC-CCAA-CCACCA- 3' Sharpin mmu-miR-669d beg:111 end:132 pic:3' TGTATATGTA--CG-TGTGTGTTCA 5'& ||| || |||.||||| &5' ------ACAGGGGCTACATACAAG- 3' Sharpin mmu-miR-758 beg:3 end:21 pic:3' ATCACCTGG--TCCAGTGTTT 5'& ||| ||||.|||.| &5' ------ACCAAAGGTTACAGA 3' Sharpin mmu-miR-758 beg:23 end:42 pic:3' ATCACCTGGTC--CAGTGTTT 5'& ||| || ||||||. &5' ---TGGCCCTCCTGTCACAG- 3' Sharpin mmu-miR-760 beg:29 end:51 pic:3' AGGG--GTGTCTGGGTCTCGGC 5'& |||. |||||.|||| || &5' TCCTGTCACAGGCCCAA--CC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Sharpin RAID00073734 mmu-miR-141-3p miRNA MIMAT0000153 Sharpin mRNA 106025 Prediction 0.1828 Sharpin RAID00700968 mmu-miR-3091-3p miRNA MIMAT0014904 Sharpin mRNA 106025 Prediction 0.1828 Sharpin RAID00734869 mmu-miR-9-5p miRNA MIMAT0000142 Sharpin mRNA 106025 Prediction 0.1828 Sharpin RAID01201668 mmu-miR-297a-5p miRNA MIMAT0000375 Sharpin mRNA 106025 NGS (Next Generation Sequencing) 0.5483 Sharpin RAID01832275 mmu-miR-2861 miRNA MIMAT0013803 Sharpin mRNA 106025 Prediction 0.1828 Sharpin RAID02392467 mmu-miR-200a-3p miRNA MIMAT0000519 Sharpin mRNA 106025 Prediction 0.1828 Sharpin RAID03081920 mmu-miR-149-5p miRNA MIMAT0000159 Sharpin mRNA 106025 Prediction 0.1828 Sharpin RAID03817400 mmu-miR-542-3p miRNA MIMAT0003172 Sharpin mRNA 106025 Prediction 0.1828