DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0000375 | mmu-miR-297a | 106025 | Sharpin | uguacgUGUACGUG-UGUAUGUa | ||| | :| ||||||| | uaaacaACAGGGGCUACAUACAa | 2 | 17 | 108 | 130 | [mm9:15:76177498-76177520:-] | 0.5188 | 151 | 7 | -13.31 | -0.6548 |
MIMAT0004759 | mmu-miR-466a-5p | 106025 | Sharpin | auaCAUGUACAUGUGUGUGUAu | ||| || || | |||||| | cuaGUA-AU-UAAAGACACAUa | 2 | 20 | 132 | 151 | [mm9:15:76177477-76177496:-] | 0.5188 | 127 | 6 | -10.78 | -0.1322 |
MIMAT0003166 | mmu-miR-546 | 106025 | Sharpin | cugaggcaCGGUGGUa | ||||||| | ------aaGCCACCAa | 2 | 9 | 1 | 10 | [mm9:15:76177691-76177700:-] | 0.5615 | 140 | 7 | -12.80 | -0.7192 |
MIMAT0003895 | mmu-miR-764-3p | 106025 | Sharpin | ugucaacggUGAUACC-GGAGGa | | ||||| ||||| | guuacagagAAUAUGGCCCUCCu | 2 | 14 | 13 | 35 | [mm9:15:76177593-76177615:-] | 0.5382 | 121 | 0 | -20.96 | -0.2203 |
MIMAT0003457 | mmu-miR-680 | 106025 | Sharpin | ggggguaCAGUCGUCUACGGg | | ||| ||||||| | uguugggGACAG-AGAUGCCa | 2 | 15 | 84 | 103 | [mm9:15:76177525-76177544:-] | 0.5188 | 148 | 7 | -16.77 | -0.2325 |
MIMAT0003479 | mmu-miR-669c | 106025 | Sharpin | ugUGU-GUAGGUGUGUGUU-GAUa | ||| : |:|||:|||| ||| | caACAGGGGCUACAUACAAGCUAg | 2 | 21 | 112 | 135 | [mm9:15:76177493-76177516:-] | 0.5188 | 127 | 0 | -18.21 | -1.0992 |
MIMAT0003480 | mmu-miR-297b-5p | 106025 | Sharpin | uguacaaGUACGUG-UGUAUGUa | || | :| ||||||| | uaaacaaCAGGGGCUACAUACAa | 2 | 16 | 108 | 130 | [mm9:15:76177498-76177520:-] | 0.5188 | 146 | 7 | -12.17 | -0.6622 |
MIMAT0003488 | mmu-miR-698 | 106025 | Sharpin | ucccUUCCUUUG-CUCUUAc | |||| || |||||| | accaAAGGUUACAGAGAAUa | 2 | 16 | 6 | 25 | [mm9:15:76177603-76177615,76177689-76177695:-] | 0.5498 | 123 | 6 | -13.50 | -0.2566 |
MIMAT0004865 | mmu-miR-297c | 106025 | Sharpin | uguacaUGUACGUG-UGUAUGUa | ||| | :| ||||||| | uaaacaACAGGGGCUACAUACAa | 2 | 17 | 108 | 130 | [mm9:15:76177498-76177520:-] | 0.5188 | 151 | 7 | -13.31 | -0.6548 |
MIMAT0004875 | mmu-miR-466b-5p | 106025 | Sharpin | guaCAUGUACAUGUGUGUGUAg | ||| || || | |||||| | cuaGUA-AU-UAAAGACACAUa | 2 | 20 | 132 | 151 | [mm9:15:76177477-76177496:-] | 0.5188 | 127 | 6 | -9.76 | -0.1322 |
MIMAT0004877 | mmu-miR-466c-5p | 106025 | Sharpin | auaCAUGUACGUGUGUGUGUAg | ||| || :| | |||||| | cuaGUA-AU-UAAAGACACAUa | 2 | 20 | 132 | 151 | [mm9:15:76177477-76177496:-] | 0.5188 | 123 | 6 | -10.86 | -0.1322 |
MIMAT0004879 | mmu-miR-466e-5p | 106025 | Sharpin | auaCAUGUACAUGUGUGUGUAg | ||| || || | |||||| | cuaGUA-AU-UAAAGACACAUa | 2 | 20 | 132 | 151 | [mm9:15:76177477-76177496:-] | 0.5188 | 127 | 6 | -9.76 | -0.1322 |
MIMAT0005837 | mmu-miR-1187 | 106025 | Sharpin | aauguguguaugugugUGUGUAu | |||||| | aagcuaguaauuaaagACACAUa | 2 | 8 | 129 | 151 | [mm9:15:76177477-76177499:-] | 0.5188 | 120 | 6 | -8.47 | -0.1309 |
MIMAT0005859 | mmu-miR-1198 | 106025 | Sharpin | ggUUCGGUC---GGUCCUUGUGUAu | ||||:|| ::| :|||||| | acAAGCUAGUAAUUAAAGACACAUa | 2 | 21 | 127 | 151 | [mm9:15:76177477-76177501:-] | 0.5188 | 139 | 6 | -21.70 | -0.1348 |
MIMAT0007880 | mmu-miR-1901 | 106025 | Sharpin | ccugggggcccucAUGCUCGcc | ||||||| | aauuaaagacacaUACGAGCca | 3 | 10 | 137 | 158 | [mm9:15:76177470-76177491:-] | 0.5188 | 125 | 0 | -11.93 | -0.2429 |
MIMAT0013803 | mmu-miR-2861 | 106025 | Sharpin | ggCGGGCGG-CG--GUCCGGGg | |||| || |: ||||||| | ugGCCCUCCUGUCACAGGCCCa | 2 | 18 | 26 | 47 | [mm9:15:76177581-76177602:-] | 0.5382 | 151 | 7 | -29.34 | -0.8064 |
MIMAT0000142 | mmu-miR-9 | 106025 | Sharpin | aguaugucgaucuauUGGUUUCu | ||||||| | ----------aagccACCAAAGg | 2 | 9 | 1 | 13 | [mm9:15:76177615-76177615,76177689-76177700:-] | 0.5498 | 140 | 7 | -10.74 | -0.5254 |
MIMAT0000153 | mmu-miR-141 | 106025 | Sharpin | gguagaaaugguCUGUCACAAu | | ||||||| | ggggacagagauGCCAGUGUUa | 2 | 11 | 88 | 109 | [mm9:15:76177519-76177540:-] | 0.5188 | 142 | 7 | -14.27 | -0.5506 |
MIMAT0000159 | mmu-miR-149 | 106025 | Sharpin | cccUCACUUCUGUG---CCUCGGUcu | | | ||||||| |||||| | guaAUUAAAGACACAUACGAGCCA-- | 3 | 21 | 135 | 158 | [mm9:15:76177470-76177493:-] | 0.5188 | 139 | 0 | -17.27 | -0.1189 |
MIMAT0000159 | mmu-miR-149 | 106025 | Sharpin | cccucACUUCUGUGCCU-CGGUCu | ||::|||| || ||||| | cuuguUGGGGACAGAGAUGCCAGu | 2 | 19 | 82 | 105 | [mm9:15:76177523-76177546:-] | 0.5188 | 130 | 0 | -21.43 | -0.4183 |
MIMAT0000519 | mmu-miR-200a | 106025 | Sharpin | uguagcaaugguCUGUCACAAu | | ||||||| | ggggacagagauGCCAGUGUUa | 2 | 11 | 88 | 109 | [mm9:15:76177519-76177540:-] | 0.5188 | 142 | 7 | -14.32 | -0.5470 |
MIMAT0003172 | mmu-miR-542-3p | 106025 | Sharpin | aaagucaauaguuaGACAGUGu | ||||||| | agaauauggcccucCUGUCACa | 2 | 9 | 20 | 41 | [mm9:15:76177587-76177608:-] | 0.5382 | 140 | 7 | -12.88 | -0.3074 |