DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Satb1 | mmu-miR-129-3p | beg:232 | end:251 | pic:3' TACGAAAAAC-CCCATTCCCGAA 5'& |||| | ||||||| &5' ------TTTGTGTTCAAGGGCT- 3' |
Satb1 | mmu-miR-669b | beg:174 | end:192 | pic:3' TGTACGTGTACGT-GTGTTTTGA 5'& .||. .|||||||| &5' --------GTGTTTTACAAAACT 3' |
Satb1 | mmu-miR-26bstar | beg:0 | end:9 | pic:3' CTCGGTTCATTACCTCTTGTCC 5'& |||||||| &5' -------------GAGAACAG- 3' |
Satb1 | mmu-miR-1186 | beg:154 | end:166 | pic:3' GTACGGAAATTAAGGTCGTGAG 5'& ||||||||| &5' -------------CCAGCACTC 3' |
Satb1 | mmu-miR-2140 | beg:239 | end:256 | pic:3' TGGTGGTTCTAGACGTGGA 5'& .|||| ||||||| &5' ----TCAAGGGCTGCACC- 3' |
Satb1 | mmu-miR-673-3p | beg:188 | end:208 | pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| ..| |||||||||. &5' --TGCTTGG----CAGCCCCGGG 3' |
Satb1 | mcmv-miR-m01-1 | beg:283 | end:303 | pic:3' GGCAAGCTGCAA-TAAGAGGAGA 5'& || .||.||||.| &5' ------GAAATTGGTTTTCCTTT 3' |
Satb1 | mghv-miR-M1-6 | beg:152 | end:175 | pic:3' TTTTGGT-G-GAGTGTGTCAAAGT 5'& |.||| | |||| .||||.| &5' --AGCCAGCACTCAA--GGTTTTA 3' |
Satb1 | mmu-miR-1186b | beg:344 | end:379 | pic:3' CACCACGT---ACGGAA--------ATTAGGGT 5'& ||||| |||||| ||||.|. &5' GTGGTTATGATTGCCTTTTCTTTAGTAATTCT- 3' |
Satb1 | mmu-miR-1188 | beg:9 | end:31 | pic:3' AGGACCGGGTTGGAGT-GTGGT 5'& ||.| ..||.|| || |||| &5' TCTT--TTCAGCCACACCACC- 3' |
Satb1 | mmu-miR-1199 | beg:56 | end:76 | pic:3' GGCGCGCTGGCCCTGAGTCT 5'& || .|.| | ||||||| &5' CCTTGTGTTC---ACTCAGA 3' |
Satb1 | mmu-miR-128 | beg:165 | end:180 | pic:3' TTTCTCTGGCC-AAGTGACACT 5'& || ||.|||||| &5' ---------GGTTTTACTGTG- 3' |
Satb1 | mmu-miR-132 | beg:209 | end:227 | pic:3' GCTGGTACCGACA--TCTGACAAT 5'& || .||||||| &5' --------GCGTCAAGGACTGTT- 3' |
Satb1 | mmu-miR-1968 | beg:233 | end:254 | pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& . | .| || .|||||| &5' ------TTGTGTTCAAGGGCTGCA 3' |
Satb1 | mmu-miR-1983 | beg:193 | end:211 | pic:3' TCTTTTGTACGAGGTCCACTC 5'& ..|| || ||.||||| &5' ----GGCA-GCCCCGGGTGA- 3' |
Satb1 | mmu-miR-19astar | beg:171 | end:192 | pic:3' CATCACGTTGATAC-----GTTTTGAT 5'& |||.|| |||||||. &5' --------ACTGTGTTTTACAAAACTG 3' |
Satb1 | mmu-miR-19b | beg:111 | end:127 | pic:3' AGTCAAAACGTACCTA--AACGTGT 5'& ||| ||||||| &5' ------------GGAAACTTGCACA 3' |
Satb1 | mmu-miR-200astar | beg:212 | end:232 | pic:3' AGGTCGTGACAGGCCATTCTAC 5'& || || |||||..||||. &5' TCAAGGACTGTTTGGTAG---- 3' |
Satb1 | mmu-miR-200b | beg:14 | end:37 | pic:3' AGTAGTAATGGTCCGTCATAAT 5'& ||| |||| |.||||| &5' TCAGCCACACCAC-CGGTATT- 3' |
Satb1 | mmu-miR-2140 | beg:22 | end:41 | pic:3' TGGTGGTTCTAGACGTGGA 5'& ||||||.. ||.| ||| &5' ACCACCGGTATTT---CCT 3' |
Satb1 | mmu-miR-22star | beg:133 | end:150 | pic:3' ATTTCGAACGGTGACTTCTTGA 5'& .|||.| ||||.|| &5' -GAAGTTG------GAAGGAC- 3' |
Satb1 | mmu-miR-302c | beg:316 | end:336 | pic:3' GGTGACTTTGTACC---TTCGTGAA 5'& |||.|.| |||||.| &5' ---CTGGAGCCTCAAATAAGCATT- 3' |
Satb1 | mmu-miR-3099star | beg:128 | end:144 | pic:3' GTTCCCGACCTTCCTTCGACC 5'& |||||||||.||| &5' --------GGAAGGAAGTTGG 3' |
Satb1 | mmu-miR-337-3p | beg:126 | end:145 | pic:3' TCCGTAGTATATCC-TCGACTT 5'& || ||| ||.||.| &5' ------CAGGAAGGAAGTTGGA 3' |
Satb1 | mmu-miR-381 | beg:47 | end:67 | pic:3' TGTCTC-TCGAACGGGAACATAT 5'& ||| ||. ||||||.| &5' ---GAGAAGTCCA-CCTTGTGT- 3' |
Satb1 | mmu-miR-453 | beg:186 | end:203 | pic:3' ACGTTCGAGTGATACTCCGTTGGA 5'& |||. ||||.|| &5' ---------ACTGCTTGGCAGCC- 3' |
Satb1 | mmu-miR-470 | beg:201 | end:222 | pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& | .||| .||||.| &5' -----CGGGTGAAGCGTCAAGGA 3' |
Satb1 | mmu-miR-488 | beg:0 | end:20 | pic:3' CTGGTTCTTTGTC----GGAAAGTT 5'& .|| ||||| |.|||||. &5' ----GAG-AACAGTATTCTTTTCAG 3' |
Satb1 | mmu-miR-493 | beg:65 | end:86 | pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& ||| ||| ||||||| &5' -----CACTCAGACAAACCTTCA 3' |
Satb1 | mmu-miR-691 | beg:117 | end:135 | pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& .||| |||||| &5' ----TTGCACAAA--CAGGAA- 3' |
Satb1 | mmu-miR-693-5p | beg:337 | end:353 | pic:3' CTTTTGAAAGCCTACACCGAC 5'& ||| ||| |||||.| &5' ---AAC-TTC---TGTGGTT- 3' |
Satb1 | mmu-miR-698 | beg:128 | end:146 | pic:3' TCCCTTCCTTTGCTCTTAC 5'& ||||||||. .||| &5' --GGAAGGAAGTTGGAA-- 3' |
Satb1 | mmu-miR-707 | beg:344 | end:360 | pic:3' GCATCCGTTCGCC-GTACTGAC 5'& |.|| .||||.|| &5' ---------GTGGTTATGATTG 3' |
Satb1 | mmu-miR-712 | beg:117 | end:138 | pic:3' CCATGGCG-GGCCCA-CTTCCTC 5'& ..|| | |||||| &5' ----TTGCACAAACAGGAAGGA- 3' |
Satb1 | mmu-miR-742 | beg:280 | end:299 | pic:3' AAATGGGTCGTACCACCGAAAG 5'& |||| |||.|||| &5' -----CCAGAAAT-TGGTTTTC 3' |
Satb1 | mmu-miR-876-5p | beg:42 | end:59 | pic:3' ATCACTAAGTGT-CTCTTTAGGT 5'& ||| |||||.|||| &5' ---------ACATGAGAAGTCCA 3' |
Satb1 | mcmv-miR-m59-2 | beg:97 | end:116 | pic:3' CCGAGACACTCCCGAGAAGCCC 5'& ||| | ||| ||||||| &5' GGC-CAATGAA---TCTTCGG- 3' |