SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3023778 | snp | A/C | 0.46875 | 0.121031 | utr-variant-3-prime | Satb1 | GRCm38.p3 | 17:51739714 | GTTTTACTGTGTTTT[A/C]CAAAACTGCTTGGCA | 20230 |
rs6193898 | snp | A/G | 0.362812 | 0.2231 | intron-variant | Satb1 | Mm_Celera | 17:51765818 | TAGGGGAGAGTAGAC[A/G]TCTGGGGTGTTCTTA | 20230 |
rs6276748 | snp | A/T | 0.5 | 0 | intron-variant | Satb1 | Mm_Celera | 17:51816149 | ATACACAAGATTTTT[A/T]AAAACTTCATGAAAG | 20230 |
rs6279189 | snp | C/T | 0.375 | 0.216506 | utr-variant-3-prime | Satb1 | Mm_Celera | 17:51737946 | CTGAGGAAATGCTCC[C/T]CCGGAAGACAGTAGC | 20230 |
rs6280202 | snp | A/C | 0.359862 | 0.224567 | utr-variant-3-prime | Satb1 | Mm_Celera | 17:51738124 | ACTTGGAGTCCAGGG[A/C]TCTGCCTCCTACTAT | 20230 |
rs6280715 | snp | A/C | 0.290657 | 0.246672 | utr-variant-3-prime, downstream-variant-500B | Satb1 | Mm_Celera | 17:51738191 | TGTTCACCTTGCCTA[A/C]CTATGACTTGTAAAA | 20230 |
rs6291106 | snp | C/G | 0.5 | 0 | intron-variant | Satb1 | Mm_Celera | 17:51816516 | CATGGTCTGTGTTGG[C/G]CATATAAGGATGTCT | 20230 |
rs6291164 | snp | C/T | 0.5 | 0 | intron-variant | Satb1 | Mm_Celera | 17:51816560 | TGTTTTGCTGTTATG[C/T]GTCTCATTTTGTCTG | 20230 |
rs6313487 | snp | C/T | 0.359862 | 0.224567 | intron-variant | Satb1 | Mm_Celera | 17:51778360 | TTAGTATTAATTTCT[C/T]ATGACTGACTGATCC | 20230 |
rs13483026 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Satb1 | Mm_Celera | 17:51745067 | AGTTTGCCTCAACTT[A/G]TGTGAACAGACTATG | 20230 |
rs29497750 | snp | C/T | 0.359862 | 0.224567 | intron-variant | Satb1 | Mm_Celera | 17:51749305 | TCTCTCTTTTCCATG[C/T]ATCAACATCAAATGT | 20230 |
rs29499041 | snp | A/G | 0.290657 | 0.246672 | intron-variant | Satb1 | Mm_Celera | 17:51769945 | GTTGGGATTTTGCCT[A/G]GTCTTAACAATTCTC | 20230 |
rs29501083 | snp | A/T | 0.35503 | 0.226867 | intron-variant | Satb1 | Mm_Celera | 17:51749842 | AACATAGCATTTACA[A/T]ATGCCTACGAAGAGC | 20230 |
rs29501698 | snp | C/T | 0.345679 | 0.230967 | intron-variant | Satb1 | Mm_Celera | 17:51767796 | AGGCTTCAACCTCTC[C/T]GTGATGCCAACTCGC | 20230 |
rs29502567 | snp | A/C | 0.290657 | 0.246672 | intron-variant | Satb1 | Mm_Celera | 17:51749507 | ACAGCTTAAATATTC[A/C]TGTGCTCCGTCTGAT | 20230 |
rs29505046 | snp | A/G | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51801076 | AGGTCCATACAGTGA[A/G]ATATACCTATTAAAT | 20230 |
rs29519817 | snp | A/G | 0.277778 | 0.248452 | synonymous-codon, intron-variant | Satb1 | Mm_Celera | 17:51767967 | TTCCTGCTGAATCTC[A/G]TCATAAATGGAGGCA | 20230 |
rs29522076 | snp | A/G | 0.415225 | 0.187619 | intron-variant | Satb1 | Mm_Celera | 17:51758302 | TGGAGCTCCGAGTGA[A/G]AGTAGCATAAAGCAC | 20230 |
rs29533809 | snp | C/T | 0.375 | 0.216506 | intron-variant | Satb1 | Mm_Celera | 17:51752181 | AGAATAATGGGGTTT[C/T]GGGGAGCCCAAAATG | 20230 |
rs33061990 | snp | C/T | 0.375 | 0.216506 | intron-variant | Satb1 | Mm_Celera | 17:51832314 | CGCTCGAGAGAAGGG[C/T]CAGCAAGACCCCGGC | 20230 |
rs33062016 | snp | C/T | 0.290657 | 0.246672 | intron-variant | Satb1 | Mm_Celera | 17:51758891 | GGGCTCCTTCACTGA[C/T]TGGATGGGGCCTCCA | 20230 |
rs33078346 | snp | A/G | 0.375 | 0.216506 | intron-variant | Satb1 | Mm_Celera | 17:51752120 | TCCCTGATGAGAGCG[A/G]TGCTGGTGGGGCTTT | 20230 |
rs33085044 | snp | C/T | 0.290657 | 0.246672 | intron-variant | Satb1 | Mm_Celera | 17:51767347 | GTCTTTGACTGCCAG[C/T]TTAACTCTATGCAGT | 20230 |
rs33104259 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Satb1 | Mm_Celera | 17:51762915 | AAGCAAAAAGTGCAC[A/G]TGGCTTTCAGCTAGC | 20230 |
rs33104871 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Satb1 | Mm_Celera | 17:51753489 | GAGAGGACTCGCCAC[A/G]ACACAGGGAAGAGCC | 20230 |
rs33112329 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Satb1 | Mm_Celera | 17:51771436 | TATTACTTGCCAAAT[A/G]AAGACCTGAAATAGC | 20230 |
rs33115027 | snp | C/T | 0.415225 | 0.187619 | intron-variant | Satb1 | Mm_Celera | 17:51751017 | AGTAAGGAATATCAG[C/T]ACCACCACCTAGAAC | 20230 |
rs33132423 | snp | A/G | 0.290657 | 0.246672 | intron-variant | Satb1 | Mm_Celera | 17:51756878 | TTAACTGCCAGCCAG[A/G]AAGAAAAAAGGCAAT | 20230 |
rs33135546 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Satb1 | Mm_Celera | 17:51747044 | AACAACAAAACCTGG[C/T]ATGGACCCTGTGTAA | 20230 |
rs33171591 | snp | C/T | 0.5 | 0 | intron-variant | Satb1 | Mm_Celera | 17:51763159 | GCACAGAAATCTAAT[C/T]CTATTTAGATCCACA | 20230 |
rs33185276 | snp | C/T | 0.475309 | 0.108333 | intron-variant | Satb1 | Mm_Celera | 17:51762483 | AGATCTCACCTGTAT[C/T]GCATTCGGCGTGGGG | 20230 |
rs33198573 | snp | C/T | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51769341 | CCCCCGTGAAATGTA[C/T]CTTTTGATGAATCCT | 20230 |
rs33204840 | snp | A/T | 0.304688 | 0.243945 | intron-variant | Satb1 | Mm_Celera | 17:51758191 | ATGAAATGAAGTCCA[A/T]GAGAAGGTAGGAAGA | 20230 |
rs33212345 | snp | A/G | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51748240 | ACAAGAACGGAGTAC[A/G]TAATCCATTAAACAG | 20230 |
rs33223623 | snp | C/T | 0.255 | 0.24995 | intron-variant | Satb1 | Mm_Celera | 17:51759324 | CAATGATCTAAGGAA[C/T]TTCCAAGCAGGAGGA | 20230 |
rs33228954 | snp | C/T | 0.5 | 0 | intron-variant | Satb1 | Mm_Celera | 17:51792455 | AGTAAGTGACAGGGT[C/T]ACTAAATGTCATGCC | 20230 |
rs33246203 | snp | C/G | 0.465374 | 0.126941 | intron-variant | Satb1 | Mm_Celera | 17:51761041 | TAGACCACTTCATCA[C/G]TAAAAGCCATCCTCA | 20230 |
rs33257414 | snp | A/G | 0.375 | 0.216506 | intron-variant | Satb1 | Mm_Celera | 17:51749264 | TTCTCTTCCACAGCC[A/G]TAGTGAGAAGTGCAC | 20230 |
rs33302946 | snp | A/G | 0.415225 | 0.187619 | intron-variant | Satb1 | Mm_Celera | 17:51758749 | AAATAGCTTGAAGCA[A/G]CTGTGTGAAACATTC | 20230 |
rs33404176 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Satb1 | Mm_Celera | 17:51767837 | GACATGGCTTTCATC[A/G]ACCATGCCACAGGCG | 20230 |
rs33425793 | snp | C/T | 0.5 | 0 | intron-variant | Satb1 | Mm_Celera | 17:51772465 | CAATTCAGTTTAGCA[C/T]AGAGCTTCCCACCCC | 20230 |
rs33427339 | snp | C/T | 0.375 | 0.216506 | intron-variant | Satb1 | Mm_Celera | 17:51752118 | CTTCCCTGATGAGAG[C/T]GGTGCTGGTGGGGCT | 20230 |
rs33438608 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Satb1 | Mm_Celera | 17:51772082 | AAATTCCATTGTGCA[A/G]AGTCATTCCAAATAG | 20230 |
rs33444362 | snp | A/T | 0.456747 | 0.140554 | intron-variant | Satb1 | Mm_Celera | 17:51750885 | TCTTCAAATTGGGAC[A/T]CGTCCTCCTTGAACT | 20230 |
rs33458883 | snp | A/G | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51748233 | GGTGGGAACAAGAAC[A/G]GAGTACATAATCCAT | 20230 |
rs33465845 | snp | C/T | 0.475309 | 0.108333 | intron-variant | Satb1 | Mm_Celera | 17:51784834 | CCATCGTTTTATACC[C/T]CGGCTCATCTTGATG | 20230 |
rs33498446 | snp | A/G | 0.415225 | 0.187619 | intron-variant | Satb1 | Mm_Celera | 17:51752912 | AGCAAAAAGTTGGAA[A/G]TAACCTAAATTCACT | 20230 |
rs33502292 | snp | A/C | | | intron-variant | Satb1 | GRCm38.p3 | 17:51761803 | TGGAATTGTTGAAAT[A/C]AAAAAAAAAAAAAAA | 20230 |
rs33521452 | snp | G/T | 0.456747 | 0.140554 | intron-variant | Satb1 | Mm_Celera | 17:51769207 | TGAAGCTCATGCCAG[G/T]ATAAATGCACAGAAA | 20230 |
rs33551277 | snp | C/T | 0.42 | 0.183303 | intron-variant | Satb1 | Mm_Celera | 17:51762177 | TTTCTAAGATGCAAA[C/T]ATCAGGGGAGTGGGT | 20230 |
rs33563996 | snp | C/T | 0.255 | 0.24995 | intron-variant | Satb1 | Mm_Celera | 17:51765214 | ACAGAAAATACTCCA[C/T]GCATCAGTCACTTGT | 20230 |
rs33581202 | snp | C/T | 0.375 | 0.216506 | intron-variant | Satb1 | Mm_Celera | 17:51756737 | ACCTTAAAAATTCAG[C/T]TTGATGGATAAGGCT | 20230 |
rs33590588 | snp | A/T | 0.265928 | 0.249492 | intron-variant | Satb1 | Mm_Celera | 17:51759495 | GTATGATATTTGGCA[A/T]ATGCTGGCACGAAGC | 20230 |
rs33611622 | snp | C/T | 0.465374 | 0.126941 | intron-variant | Satb1 | Mm_Celera | 17:51762548 | CCCCTTATGAGCGAA[C/T]GCCCTTCAGTCTGCT | 20230 |
rs33631542 | snp | A/G | 0.265928 | 0.249492 | intron-variant | Satb1 | Mm_Celera | 17:51765624 | CAGGTAATCCCTCTC[A/G]ATATTTGCATGTGTT | 20230 |
rs33648746 | snp | C/T | 0.304688 | 0.243945 | intron-variant | Satb1 | Mm_Celera | 17:51754389 | TCCATTACGCAAACA[C/T]GTTTAGCAGAAGTTT | 20230 |
rs33659322 | snp | A/G | 0.265928 | 0.249492 | intron-variant | Satb1 | Mm_Celera | 17:51764987 | TACTGGTAGCTACTC[A/G]CTTTATGTTCAAAGC | 20230 |
rs33669806 | snp | C/T | 0.375 | 0.216506 | intron-variant | Satb1 | Mm_Celera | 17:51758835 | ACATGGTACCAAGCC[C/T]TTCTTGGAATCTCCA | 20230 |
rs33683170 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Satb1 | Mm_Celera | 17:51749539 | ATTCATTTTCAAAGG[C/T]GTGGCGGCTGATACA | 20230 |
rs33698558 | snp | A/T | 0.375 | 0.216506 | intron-variant | Satb1 | Mm_Celera | 17:51747996 | AAGGAAAAATACATT[A/T]AAAAAAAAATAGAAT | 20230 |
rs45664704 | snp | A/G | 0.231111 | 0.249285 | upstream-variant-2KB, intron-variant, utr-variant-5-prime | Satb1 | Mm_Celera | 17:51826851 | GTTCTACAACAAGTG[A/G]ACTCCCAAATGCGTG | 20230 |
rs45681515 | snp | A/G | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51763540 | TGCCCTTCCTCCTTC[A/G]GGCAAGCAGACATGG | 20230 |
rs45723793 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Satb1 | Mm_Celera | 17:51802607 | AAAGAAAACTTTAAA[C/G]GAGCACTCCAATTTT | 20230 |
rs45735804 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Satb1 | Mm_Celera | 17:51776456 | ACATCCAGATTTTTG[C/T]ACAATTTGAAATCTA | 20230 |
rs45767184 | snp | A/G | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51763848 | TCGTGCCACAGCAGT[A/G]TCTGTGACGTGCACA | 20230 |
rs45781733 | snp | G/T | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51805396 | AGAGACAGAGGAAAA[G/T]ATAGAAAACCAACAA | 20230 |
rs45822163 | snp | A/G | 0.260355 | 0.249785 | intron-variant | Satb1 | Mm_Celera | 17:51769004 | TCATTTTTATCAAAC[A/G]ATTACATGGAGCTGT | 20230 |
rs45831819 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Satb1 | Mm_Celera | 17:51771479 | GAGACAACTGTTAAC[A/G]GGAAGCCTTCCATAA | 20230 |
rs45832806 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Satb1 | Mm_Celera | 17:51772551 | AGACGGGTCTGCCCT[A/G]GGTCCACGGCAGCAT | 20230 |
rs45834556 | snp | C/T | 0.375 | 0.216506 | intron-variant | Satb1 | Mm_Celera | 17:51771900 | ACAACAGGAGAACAC[C/T]TCCAGCAGAAGCCAT | 20230 |
rs45835713 | snp | A/C | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51781284 | AAAGCCATCCTTCTA[A/C]AATCAGAACAATGAG | 20230 |
rs45837903 | snp | C/T | 0.124444 | 0.216185 | utr-variant-5-prime, intron-variant | Satb1 | Mm_Celera | 17:51826537 | TTAGCAAGGCAAGCT[C/T]ATCCCAAATGAGGTG | 20230 |
rs45847246 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Satb1 | Mm_Celera | 17:51785102 | TTTTTGCAAACAAAA[A/G]CAAAAGTCCCTAAGC | 20230 |
rs45853683 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Satb1 | Mm_Celera | 17:51760106 | TTTGATAAATCTGGA[A/G]GGAAACTAGGCAATG | 20230 |
rs45859938 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Satb1 | Mm_Celera | 17:51793743 | AAGAATCTCAACTCT[C/T]TTTGAATTGTTTCTT | 20230 |
rs45871791 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Satb1 | Mm_Celera | 17:51787694 | CGGTCCATGGCGCAA[A/C]AAGACACTTAGCAAG | 20230 |
rs45888281 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Satb1 | Mm_Celera | 17:51802418 | CTTCCTCTTAAGGTA[C/T]CCAGGAATGCTCAGG | 20230 |
rs45949503 | snp | C/G | | | intron-variant | Satb1 | Mm_Celera | 17:51810091 | AAAAGTAATTAGTAT[C/G]CAAGGGAGTTGGCAT | 20230 |
rs45960913 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Satb1 | Mm_Celera | 17:51762982 | TAAAAATAGTCAAAG[A/G]ATAGCCAAAGATCTC | 20230 |
rs45994673 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Satb1 | Mm_Celera | 17:51757467 | CAAGCCCAGGTTTCA[A/G]CTTAATTCAACTCTT | 20230 |
rs46007430 | snp | C/G | 0.32 | 0.24 | upstream-variant-2KB, intron-variant, utr-variant-5-prime | Satb1 | Mm_Celera | 17:51827595 | AGGCAGTAAGTTCCA[C/G]AGCTCCGTAGACAAT | 20230 |
rs46013141 | snp | A/G | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51803183 | ATGAGCTGGCAGAGT[A/G]CACTGTCTTCTGCCA | 20230 |
rs46019025 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Satb1 | Mm_Celera | 17:51785064 | ATTGTTTGAAAGCTG[C/G]TGTGAAAACGGGCTC | 20230 |
rs46032493 | snp | A/G | 0.297521 | 0.245442 | intron-variant | Satb1 | Mm_Celera | 17:51745450 | GAAGGGCTCTGGAAC[A/G]TGGCTGGTAGAGAGT | 20230 |
rs46064106 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Satb1 | Mm_Celera | 17:51780033 | TAACCGTGCCGCCTA[C/T]TACACCAATGTTTTA | 20230 |
rs46068228 | snp | A/G | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51759009 | ACCCAATCTTCCACA[A/G]TAATGAACAACACTT | 20230 |
rs46085900 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Satb1 | Mm_Celera | 17:51793188 | TGTGAGAGGATTGTC[G/T]TTCCAAAGACCCTAG | 20230 |
rs46094136 | snp | A/C | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51806183 | GCTCAGTGACACAGG[A/C]CACAGGACTGTTGGG | 20230 |
rs46112233 | snp | C/G/T | 0.336735 | 0.234472 | intron-variant | Satb1 | GRCm38.p3 | 17:51762310 | TAAACTTACTTTCAC[C/G/T]GCTCATTCATTTCAT | 20230 |
rs46113532 | snp | A/G | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51797797 | CATTATTAAACACTT[A/G]AAACTGGCATAGCTT | 20230 |
rs46117737 | snp | A/C | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51785860 | TTGCACCCTCTGACA[A/C]TCTCCGTCCACGCCT | 20230 |
rs46130071 | snp | C/T | 0.18 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51787943 | ATTCTAATCCTTTCC[C/T]GTGTTAATATAACAC | 20230 |
rs46131354 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Satb1 | Mm_Celera | 17:51759592 | CTGGTTGTTCCTTTC[A/G]CACCCACTCTGGCCT | 20230 |
rs46169539 | snp | A/G | 0.426035 | 0.177515 | intron-variant | Satb1 | Mm_Celera | 17:51757602 | GGCTCACCTCAATTC[A/G]CACAACATGGAGTTC | 20230 |
rs46175637 | snp | A/T | 0.277778 | 0.248452 | intron-variant | Satb1 | Mm_Celera | 17:51765237 | TCACTTGTGGCAGGC[A/T]CACCCTTTACCTTTT | 20230 |
rs46177485 | snp | A/G/T | 0.244898 | 0.249948 | intron-variant | Satb1 | Mm_Celera | 17:51762952 | GAGGTAGAAAAGTGA[A/G/T]ATTCTTAAATCATTT | 20230 |
rs46189421 | snp | A/G | 0.32 | 0.24 | intron-variant | Satb1 | Mm_Celera | 17:51797033 | ATTTGTATGTCTCTC[A/G]CGCCCTTCTTGCACG | 20230 |
rs46204142 | snp | C/T | 0.336735 | 0.234472 | intron-variant | Satb1 | Mm_Celera | 17:51768133 | ATCCAAGCTGGGCAG[C/T]GTTACTCCTTTTATG | 20230 |
rs46228347 | snp | C/T | 0.396694 | 0.202437 | intron-variant | Satb1 | Mm_Celera | 17:51747200 | GCCACCAAGGAGATA[C/T]TGTTACGTACTTTAT | 20230 |
rs46240763 | snp | C/T | 0.21875 | 0.248039 | intron-variant | Satb1 | Mm_Celera | 17:51742224 | TGTGAGGTGAAAGGC[C/T]GGACAAGAGCATAAG | 20230 |