DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Rnf41; Flrf; Nrdp1 ATTTA 318-1271 2193-2197;2198-2202;2202-2206 Rnf41; Flrf; Nrdp1 WWATTTAWW 318-1271 2196-2204 Rnf41; Flrf; Nrdp1 WWWATTTAWWW 318-1271 2195-2205 Rnf41; Flrf; Nrdp1 WWWWATTTAWWWW 318-1271 2194-2206

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT593446 mmu-miR-224-5p Mus musculus Rnf41 67588 Mus musculus HITS-CLIP Functional MTI (Weak) 23597149 MIRT593447 mmu-miR-377-3p Mus musculus Rnf41 67588 Mus musculus HITS-CLIP Functional MTI (Weak) 23597149 MIRT593447 mmu-miR-377-3p Mus musculus Rnf41 67588 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT593448 mmu-miR-466q Mus musculus Rnf41 67588 Mus musculus HITS-CLIP Functional MTI (Weak) 23597149 MIRT593448 mmu-miR-466q Mus musculus Rnf41 67588 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 67588 Rnf41 auuUGGUGGUAUACUUUGGUCg |:| :| | ||||||| ucuAUC-UCUUCCAAAACCAGg 2 20 354 374 [mm9:10:127875844-127875864:+] 0.6119 141 7 -13.08 -0.2819 MIMAT0004527 mmu-miR-124* 67588 Rnf41 uaguuccAGGCGACACUUGUGc |::|| ||||||| acacauuUUUGC--UGAACACu 2 16 1582 1601 [mm9:10:127878125-127878144:+] 0.5016 144 7 -12.48 -0.4113 MIMAT0000154 mmu-miR-142-5p 67588 Rnf41 ucAUCACGAAAGAUGAAAUAc || | :| |:|||||| | uuUAAU-UUAUUUACUUUUUu 2 20 923 942 [mm9:10:127876413-127876432:+] 0.6016 125 0 -5.61 -0.1447 MIMAT0000217 mmu-miR-188-5p 67588 Rnf41 ggGAGGUGGUACGUU--CCCUAc ||:||||| ||| ||||| acCUUCACCAGCCAAGUGGGAUa 2 20 247 269 [mm9:10:127876790-127876812:+] 0.5643 123 0 -25.64 -0.5479 MIMAT0000217 mmu-miR-188-5p 67588 Rnf41 ggGAGGUGGUACGUU--CCCUAc ||:||||| ||| ||||| acCUUCACCAGCCAAGUGGGAUa 2 20 195 217 [mm9:10:127876790-127876812:+] 0.5643 123 0 -25.64 -0.8732 MIMAT0004546 mmu-miR-202-5p 67588 Rnf41 uuUCUUCAUAUACGUAUCCUu || |:| | ||||||| ccAGUCUUGUUUUCAUAGGAu 2 20 856 876 [mm9:10:127876346-127876366:+] 0.6016 151 7 -10.16 -0.4405 MIMAT0000240 mmu-miR-207 67588 Rnf41 cucccuccucUCGGUCCUCUUcg || ||||||| uuuuuuuuuaAGAAAGGAGAAaa 3 14 941 963 [mm9:10:127876431-127876453:+] 0.6016 129 0 -11.74 -0.1441 MIMAT0004572 mmu-miR-290-3p 67588 Rnf41 ccCGAAUUU--UGAUCCGCCGUGAAa || |:|| ||| | ||||||| ugGCAUGAAGGACUUUGGGGCACUUa 2 23 123 148 [mm9:10:127875613-127875638:+] 0.6097 161 7 -22.09 -0.3503 MIMAT0000370 mmu-miR-292-3p 67588 Rnf41 ugugagUUUUGGACCGCCGUGAAa |::||:| | ||||||| gcaugaAGGACUUUGGGGCACUUa 2 19 125 148 [mm9:10:127875615-127875638:+] 0.6097 162 7 -24.42 -0.3531 MIMAT0000376 mmu-miR-298 67588 Rnf41 cccuucuuGUCGGGAGGAGACGg || |: ||||||| gcaccuucCA-CUGACCUCUGCc 2 16 900 921 [mm9:10:127877443-127877464:+] 0.5706 141 7 -21.48 -0.2291 MIMAT0004578 mmu-miR-300* 67588 Rnf41 uguUUCCUAUUG----GAGAGAAGUu ||| |||| :|||||||| cguAAGCCUAACUGCAUUCUCUUCAg 2 20 989 1014 [mm9:10:127877532-127877557:+] 0.4787 154 7 -16.20 -0.2111 MIMAT0004579 mmu-miR-302a* 67588 Rnf41 cguucauguuggugcAAAUUCa |||||| uuuacuuuuuuuuuuUUUAAGa 2 8 932 953 [mm9:10:127876422-127876443:+] 0.6016 120 6 -2.31 -0.3178 MIMAT0004583 mmu-miR-130b* 67588 Rnf41 ucaUCACGUUG-UCC-CUUUCUCa |||| |:| ||| ||||||| uagAGUG-AGCAAGGAGAAAGAGu 2 20 385 407 [mm9:10:127876928-127876950:+] 0.5754 159 7 -23.60 -0.3359 MIMAT0004616 mmu-miR-30c-1* 67588 Rnf41 ccucauuuguugGGAGAGGGUc |:||||||| gcugagcccugaCUUCUCCCAc 2 11 55 76 [mm9:10:127875545-127875566:+] 0.5748 146 7 -17.31 -0.2491 MIMAT0005438 mmu-miR-30c-2* 67588 Rnf41 ucucauuuGUCGGAAGAGGGUc | | ||||||||| gcugagccCUGACUUCUCCCAc 2 15 55 76 [mm9:10:127875545-127875566:+] 0.5748 154 7 -17.67 -0.2491 MIMAT0004622 mmu-let-7c-1* 67588 Rnf41 ccUUUCGAUCUUCCAA-CAUGUc |:||| :: ||| ||||| ugAGAGCACUGGUGUUCGUACAc 2 21 669 691 [mm9:10:127876159-127876181:+] 0.5762 120 0 -13.76 -0.2112 MIMAT0004631 mmu-miR-29a* 67588 Rnf41 gacuuguggUUUUCUUUAGUCa :| | ||||||| gccaaguggGAUAUAAAUCAGa 2 14 257 278 [mm9:10:127876800-127876821:+] 0.5643 145 7 -11.71 -0.7154 MIMAT0004631 mmu-miR-29a* 67588 Rnf41 gacuuguggUUUUCUUUAGUCa :| | ||||||| gccaaguggGAUAUAAAUCAGa 2 14 205 226 [mm9:10:127876800-127876821:+] 0.5643 145 7 -11.71 -0.9962 MIMAT0004636 mmu-miR-93* 67588 Rnf41 gccCUUCACG-AU-CGAGUCGUCa |: || | || |||||||| acuGGUGUUCGUACACUCAGCAGg 2 20 676 699 [mm9:10:127876166-127876189:+] 0.5762 149 7 -17.99 -0.1070 MIMAT0000578 mmu-miR-337-3p 67588 Rnf41 ucCGUAGUAUAUCCU-CGACUu | || ||: |||| ||||| auGAAUGAUGGAGGAGGCUGAa 2 20 734 755 [mm9:10:127877277-127877298:+] 0.6899 131 0 -17.12 -0.3453 MIMAT0004656 mmu-miR-345-3p 67588 Rnf41 cagAGGUCUGGGGAUCAAGUCc |::: :|:|| ||||||| cuaUUUGAGCUCCAAGUUCAGu 2 20 1355 1376 [mm9:10:127877898-127877919:+] 0.5016 159 7 -19.01 -0.1678 MIMAT0000605 mmu-miR-350 67588 Rnf41 cuUUCACAUAC--CCGAAAC-ACUu || |||||| | |||| ||| ccAACUGUAUGUUGAAUUUGUUGAc 2 21 1865 1889 [mm9:10:127878408-127878432:+] 0.5341 127 0 -8.77 -0.5201 MIMAT0000650 mmu-miR-17* 67588 Rnf41 gauGUUCACGGGAGUGAC-GUCa ||||| | | |||| ||| cucCAAGUUCAGUGACUGACAGu 2 20 1364 1386 [mm9:10:127877907-127877929:+] 0.5016 127 0 -18.10 -0.1700 MIMAT0004660 mmu-miR-19a* 67588 Rnf41 caucacguugauacgUUUUGAu |||||| agaaaaaacaucaagAAAACUu 2 8 963 984 [mm9:10:127876453-127876474:+] 0.6016 120 6 -4.76 -0.1944 MIMAT0004662 mmu-miR-139-3p 67588 Rnf41 gagGUUGUCCCGGCGCA-GAGGu :| | | ||| ||| |||| uugUACCUGAGCCACGUACUCCc 2 20 94 116 [mm9:10:127875584-127875606:+] 0.5778 123 0 -18.00 -0.1156 MIMAT0004665 mmu-miR-218-1* 67588 Rnf41 ccacgaACUGCCUUGGUACAAa |||| ||||||| ugaaggUGACUCUUCCAUGUUu 2 17 193 214 [mm9:10:127876736-127876757:+] 0.5643 148 7 -15.42 -0.2642 MIMAT0004665 mmu-miR-218-1* 67588 Rnf41 ccacgaACUGCCUUGGUACAAa |||| ||||||| ugaaggUGACUCUUCCAUGUUu 2 17 141 162 [mm9:10:127876736-127876757:+] 0.5643 148 7 -15.42 -0.5814 MIMAT0004670 mmu-miR-7a* 67588 Rnf41 auacCGUCUGACACUAAACAAc ||| | | ||||||| gaaaGCACAAAGAAAUUUGUUu 2 19 293 314 [mm9:10:127875783-127875804:+] 0.6119 150 7 -5.74 -0.7526 MIMAT0004670 mmu-miR-7a* 67588 Rnf41 auaccgucugACACUAAACAAc ||| :|||||| uuuccuuuggUGUUGUUUGUUu 2 13 803 824 [mm9:10:127876293-127876314:+] 0.6016 136 6 -7.19 -0.1420 MIMAT0004670 mmu-miR-7a* 67588 Rnf41 auacCGUCUGACACUAAACAAc |:| ::|| ||||||| aacuGUAUGUUG-AAUUUGUUg 2 19 1867 1887 [mm9:10:127878410-127878430:+] 0.5341 148 7 -11.88 -0.2638 MIMAT0004670 mmu-miR-7a* 67588 Rnf41 auaccGUCUGACACUAAACAAc || : | ||||||| ugaccCAUGAAGAAAUUUGUUc 2 18 113 134 [mm9:10:127876656-127876677:+] 0.5643 141 7 -6.21 -0.1706 MIMAT0004670 mmu-miR-7a* 67588 Rnf41 auaccGUCUGACACUAAACAAc || : | ||||||| ugaccCAUGAAGAAAUUUGUUc 2 18 61 82 [mm9:10:127876656-127876677:+] 0.5643 141 7 -6.21 -0.4256 MIMAT0000706 mmu-miR-362-5p 67588 Rnf41 uaaGUGU-GGAUCCAAGGU-UCCUAa | || :|| | ||:|| ||||| uuaCCCAGUCUUGUUUUCAUAGGAUg 2 22 852 877 [mm9:10:127876342-127876367:+] 0.6016 128 0 -12.08 -0.2644 MIMAT0000742 mmu-miR-378* 67588 Rnf41 uguguCCUGGACC-UCAGUCCUc | | |||| ||||||| -gagcGUAACUGGCUGUCAGGAa 2 18 1 22 [mm9:10:127875491-127875512:+] 0.6773 152 7 -20.21 -1.1190 MIMAT0000742 mmu-miR-378* 67588 Rnf41 uguguCCUGGACC-UCAGUCCUc | | |||| ||||||| -gagcGUAACUGGCUGUCAGGAa 2 18 1 22 [mm9:10:127875491-127875512:+] 0.6773 152 7 -20.21 -0.2150 MIMAT0000742 mmu-miR-378* 67588 Rnf41 uguguCCUGGACC-UCAGUCCUc | | |||| ||||||| -gagcGUAACUGGCUGUCAGGAa 2 18 1 22 [mm9:10:127875491-127875512:+] 0.6773 152 7 -20.21 -0.5273 MIMAT0001421 mmu-miR-434-5p 67588 Rnf41 acCAA-GUUUGGUACU-CAGCUCg ||| ::|:||| | |||||| agGUUGUGAGCCACCAUGUCGAGu 2 21 1789 1812 [mm9:10:127878332-127878355:+] 0.5016 127 6 -21.22 -0.1888 MIMAT0004758 mmu-miR-463 67588 Rnf41 gaugGAAUAUACCACAGAUAGu :|| || |||||||| ggcaUUUCUA-AUUGUCUAUCu 2 19 340 360 [mm9:10:127875830-127875850:+] 0.6119 148 7 -9.98 -0.8027 MIMAT0002106 mmu-miR-465a-5p 67588 Rnf41 aguguAGUCACGGUAAGAUUUAu ||| | | | ||||||| aucucUCACU-CAACUCUAAAUu 2 19 835 856 [mm9:10:127877378-127877399:+] 0.5971 152 7 -9.03 -0.4072 MIMAT0004759 mmu-miR-466a-5p 67588 Rnf41 auACAUGU-ACAUGUGUGUGUAu ||| || |:| ||||||| caUGUCCACCAUGCUCACACAUu 2 21 1566 1588 [mm9:10:127878109-127878131:+] 0.5016 155 7 -16.23 -0.4588 MIMAT0002107 mmu-miR-466a-3p 67588 Rnf41 agaauacacacgcACAUACAUAu | ||||||| gugacuuaagauaUUUAUGUAUa 2 11 1666 1688 [mm9:10:127878209-127878231:+] 0.5016 142 7 -7.90 -1.0437 MIMAT0003409 mmu-miR-467a 67588 Rnf41 gcguauaUGUACGUCCGUGAAu || | :||||||| augaaggACUUUGGGGCACUUa 2 16 127 148 [mm9:10:127875617-127875638:+] 0.6097 147 7 -16.07 -0.3531 MIMAT0002108 mmu-miR-467a-1* 67588 Rnf41 cacauccacACACAUACAUAUa | | |||||||| gacuuaagaUAUUUAUGUAUAu 2 14 1668 1689 [mm9:10:127878211-127878232:+] 0.5016 149 7 -7.31 -0.8009 MIMAT0004781 mmu-miR-532-3p 67588 Rnf41 acgUUCGGAACCCACACCCUCc |||| | | ||||||| uaaAAGCGUAG---GUGGGAGu 2 20 421 439 [mm9:10:127876964-127876982:+] 0.5754 147 7 -16.15 -0.2540 MIMAT0003120 mmu-miR-483* 67588 Rnf41 uucUGCCCUCCCCUCCU-CACu || | | | ||||| ||| cuaACUGCACGUGAGGAUGUGa 2 19 1231 1252 [mm9:10:127877774-127877795:+] 0.5016 122 0 -13.33 -0.2599 MIMAT0003129 mmu-miR-485* 67588 Rnf41 cucucCUCUCG-GCACAUAC-UGa || ||| :| ||||| || accuuGAAAGCAUGAGUAUGCACa 2 18 1533 1556 [mm9:10:127878076-127878099:+] 0.5016 120 0 -10.15 -0.3367 MIMAT0003166 mmu-miR-546 67588 Rnf41 cuGAGGCACGGUGGUa :| :| ||||||| ggUUGUGAGCCACCAu 2 15 1790 1805 [mm9:10:127878333-127878348:+] 0.5016 146 7 -19.24 -0.1426 MIMAT0003375 mmu-miR-302c* 67588 Rnf41 cgUCCAUUGGGGUAC-AAUUUCg ||| : |: || | |||||| ugAGGGGCCUGCAAGUUUAAAGg 2 21 1463 1485 [mm9:10:127878006-127878028:+] 0.5016 124 6 -13.82 -0.1726 MIMAT0003726 mmu-miR-675-3p 67588 Rnf41 ugACUCGCCAAUCCCGUAUGUc || :|| | ||||||| ucUGUCUGGAAACUGCAUACAc 2 21 933 954 [mm9:10:127877476-127877497:+] 0.5706 148 7 -15.97 -0.2663 MIMAT0003892 mmu-miR-762 67588 Rnf41 cgaGACAGGGCCGGG-GUCGGGg ||| |:: ||| |||||| gccCUGACUUCUCCCACAGCCCu 2 20 60 82 [mm9:10:127875550-127875572:+] 0.5778 127 6 -24.97 -0.1503 MIMAT0004823 mmu-miR-666-3p 67588 Rnf41 ucguccGCUAGUGCGACGUCGg | | :|: ||||||| uuugcaCCAGUAU-CUGCAGCu 2 17 768 788 [mm9:10:127877311-127877331:+] 0.6899 142 7 -15.73 -0.4920 MIMAT0003897 mmu-miR-759 67588 Rnf41 caguuuuaacaaacGUGAGACg ||||||| gccuugcccaagcuCACUCUGu 2 9 695 716 [mm9:10:127877238-127877259:+] 0.6899 140 7 -13.22 -0.5399 MIMAT0003740 mmu-miR-674 67588 Rnf41 auGUGGUGAGGGUAGAGUCACg || || | ||||||||| gcCAGCAGACAGAUCUCAGUGa 2 21 1444 1465 [mm9:10:127877987-127878008:+] 0.5016 160 7 -21.04 -0.3411 MIMAT0003449 mmu-miR-488* 67588 Rnf41 aacucucACGAU-AAUAGACCc | ||: |||||||| ggaaacuUCCUGUUUAUCUGGg 2 15 220 241 [mm9:10:127876763-127876784:+] 0.5643 149 7 -16.84 -0.3147 MIMAT0003449 mmu-miR-488* 67588 Rnf41 aacucucACGAU-AAUAGACCc | ||: |||||||| ggaaacuUCCUGUUUAUCUGGg 2 15 168 189 [mm9:10:127876763-127876784:+] 0.5643 149 7 -16.84 -0.7074 MIMAT0004825 mmu-miR-423-5p 67588 Rnf41 uuuCAGAGC-GAGAGA-CGGGGAGu || |:| ||| | ||||||| ucuGUGUUGCCUCGGUGGCCCCUCu 2 21 751 775 [mm9:10:127876241-127876265:+] 0.5214 154 7 -26.73 -0.1239 MIMAT0003459 mmu-miR-682 67588 Rnf41 gucUGAAGUGACACUGAC-GUc | |||| ||||||| || ccaAGUUCA--GUGACUGACAg 2 19 1366 1385 [mm9:10:127877909-127877928:+] 0.5016 123 0 -17.62 -0.1408 MIMAT0003462 mmu-miR-684 67588 Rnf41 aaCUGAACUUC--CCUUUUGa || | :|| ||||||| aaGAGGUAGAGUUGGAAAACc 2 18 21 41 [mm9:10:127875511-127875531:+] 0.5719 144 7 -9.67 -0.4747 MIMAT0003462 mmu-miR-684 67588 Rnf41 aacugaacuuccCUUUUGa |||||| aaaaaacaucaaGAAAACu 2 8 965 983 [mm9:10:127876455-127876473:+] 0.6016 120 6 -6.31 -0.2219 MIMAT0003470 mmu-miR-691 67588 Rnf41 aaaagacgGAGAGA-AGUCCUUa || || ||||||| gagcguaaCUGGCUGUCAGGAAg 2 15 1 23 [mm9:10:127875491-127875513:+] 0.6773 145 7 -16.51 -0.8723 MIMAT0003470 mmu-miR-691 67588 Rnf41 aaaagacgGAGAGA-AGUCCUUa || || ||||||| gagcguaaCUGGCUGUCAGGAAg 2 15 1 23 [mm9:10:127875491-127875513:+] 0.6773 145 7 -16.51 -0.2181 MIMAT0004189 mmu-miR-693-3p 67588 Rnf41 aaUGUCGGUGUAGACUUUCGACg :|| |::||| ||||||| caGCACCUGCAU-AAAAAGCUGa 2 22 1264 1285 [mm9:10:127877807-127877828:+] 0.5016 155 7 -17.11 -0.5753 MIMAT0004189 mmu-miR-693-3p 67588 Rnf41 aauGUCGGUGUAGACUUUCG-ACg || ||| | ||||||| || uucCAAACACCU-UGAAAGCAUGa 2 21 1525 1547 [mm9:10:127878068-127878090:+] 0.5016 126 0 -15.61 -0.4024 MIMAT0003474 mmu-miR-694 67588 Rnf41 gaaguccgUUGUAAAAGUc ||:||||||| gguucccaAAUAUUUUCAg 2 12 275 293 [mm9:10:127875765-127875783:+] 0.6119 151 7 -13.55 -0.9710 MIMAT0003474 mmu-miR-694 67588 Rnf41 gaagucCGUUGUAAAAGUc |:|| ||||||| augucuGUAA-AUUUUCAg 2 14 208 225 [mm9:10:127875698-127875715:+] 0.6119 147 7 -10.66 -0.5537 MIMAT0005448 mmu-miR-467b 67588 Rnf41 guauaUGUACGUCCGUGAAUg || | :|||||||| gaaggACUUUGGGGCACUUAg 2 17 129 149 [mm9:10:127875619-127875639:+] 0.6415 152 7 -14.19 -0.1206 MIMAT0003478 mmu-miR-467b* 67588 Rnf41 cacaaccacACACAUACAUAUa | | |||||||| gacuuaagaUAUUUAUGUAUAu 2 14 1668 1689 [mm9:10:127878211-127878232:+] 0.5016 149 7 -7.31 -0.8009 MIMAT0004827 mmu-miR-297b-3p 67588 Rnf41 auacccAUAC-ACACAUACAUAu || | | | ||||||| gugacuUAAGAUAUUUAUGUAUa 2 17 1666 1688 [mm9:10:127878209-127878231:+] 0.5016 147 7 -7.86 -1.0383 MIMAT0003485 mmu-miR-455* 67588 Rnf41 gcuacaucagguuuCCGUGUAu ||||||| agaauuaacuggcuGGCACAUg 2 9 166 187 [mm9:10:127876709-127876730:+] 0.5643 140 7 -13.17 -0.2846 MIMAT0003485 mmu-miR-455* 67588 Rnf41 gcuacaucagguuuCCGUGUAu ||||||| agaauuaacuggcuGGCACAUg 2 9 114 135 [mm9:10:127876709-127876730:+] 0.5643 140 7 -13.17 -0.6132 MIMAT0003742 mmu-miR-455 67588 Rnf41 cacauauacgggcACCUGACg ||||||| uguuuucauaggaUGGACUGg 2 9 863 883 [mm9:10:127876353-127876373:+] 0.6016 140 7 -11.57 -0.1582 MIMAT0003487 mmu-miR-697 67588 Rnf41 agaGGUGUCCUGGUCCUACAa |::|| | : ||||||| uaaCUGCACG-UGAGGAUGUg 2 19 1232 1251 [mm9:10:127877775-127877794:+] 0.5016 148 7 -18.06 -0.1090 MIMAT0003492 mmu-miR-702 67588 Rnf41 cucgCCC--CAUUUCCCACCCGu ||| | ||:|||||||| ggaaGGGAAGGAAGGGGUGGGCg 2 18 646 668 [mm9:10:127876136-127876158:+] 0.5762 160 7 -30.00 -0.1553 MIMAT0003494 mmu-miR-704 67588 Rnf41 gauccuCGUCUCGUGUACAGa ||| | :||||||| cacaauGCACA-UACAUGUCc 2 16 1553 1572 [mm9:10:127878096-127878115:+] 0.5016 149 7 -12.52 -0.1936 MIMAT0003495 mmu-miR-705 67588 Rnf41 acgGGUGGGGUGGAGGGUGg || : | :||||||| gagCCCUGACUUCUCCCACa 2 18 58 77 [mm9:10:127875548-127875567:+] 0.5778 145 7 -25.48 -0.6614 MIMAT0003499 mmu-miR-709 67588 Rnf41 aggaggaCGGAGACGGAGg | | ||||||| ccagaacGGCACUGCCUCa 2 13 724 742 [mm9:10:127876214-127876232:+] 0.5087 144 7 -16.42 -0.3696 MIMAT0003500 mmu-miR-710 67588 Rnf41 gaGUUGAGAGG--GGU---UCU-GAACc ||:|||||| |:: ||| |||| aaCAGCUCUCCUGCUGUUCAGACCUUGa 2 21 1157 1184 [mm9:10:127877700-127877727:+] 0.5047 122 0 -21.91 -0.2460 MIMAT0003502 mmu-miR-712 67588 Rnf41 ccAUGGCGGGCCCACUUCCUc |:|: |: | ||||||| ccUGCUUCUGGCAUGAAGGAc 2 20 115 135 [mm9:10:127875605-127875625:+] 0.6097 151 7 -18.39 -0.2725 MIMAT0003502 mmu-miR-712 67588 Rnf41 ccaUGGCGGGCCCACUUCCUc ||| ||| ||||||| gucACCCCCCUUAUGAAGGAu 2 19 861 881 [mm9:10:127877404-127877424:+] 0.5043 158 7 -18.17 -0.3226 MIMAT0003510 mmu-miR-717 67588 Rnf41 ucucuuccauagagACAGACuc |||||| ucuuucccccacaaUGUCUGua 3 9 195 216 [mm9:10:127875685-127875706:+] 0.6119 120 0 -10.62 -0.1117 MIMAT0003510 mmu-miR-717 67588 Rnf41 ucUCUUCCA-UAGAGA-CAGACUc |||: | | |||| |||||| gaAGAGCAUGAGCUCUGGUCUGAu 2 21 20 43 [mm9:10:127875510-127875515,127876569-127876586:+] 0.5759 127 6 -18.02 -0.1093 MIMAT0003512 mmu-miR-450b-3p 67588 Rnf41 uacguacguuuuaCAAGGGUUa |||||||| cuaagauccccugGUUCCCAAa 2 10 263 284 [mm9:10:127875753-127875774:+] 0.6119 145 7 -12.33 -0.8857 MIMAT0004236 mmu-miR-741 67588 Rnf41 agAUGUAUCUUACCGUAGAGAGu |:|| ||| ||||||| acUGCA-CUAAU-AAAUCUCUCa 2 22 822 842 [mm9:10:127877365-127877385:+] 0.6899 141 7 -17.97 -1.0994 MIMAT0004838 mmu-miR-742* 67588 Rnf41 acuaauCGUUGGUACACUCAu |::| |||||||| cugcacGUGAGGAUGUGAGUu 2 16 1235 1255 [mm9:10:127877778-127877798:+] 0.5016 151 7 -11.80 -0.1482 MIMAT0004838 mmu-miR-742* 67588 Rnf41 acUAAUCGUUGGUACA-CUCAu :| ||| ||||||| |||| uuGUGAGCCACCAUGUCGAGUu 2 20 1792 1813 [mm9:10:127878335-127878356:+] 0.5016 139 0 -20.35 -0.2836 MIMAT0004844 mmu-miR-880 67588 Rnf41 agaUGA-GU-CUCUCCUAC-CUCAu ||| || | ||||||| |||| cuaACUGCACGUGAGGAUGUGAGUu 2 20 1231 1255 [mm9:10:127877774-127877798:+] 0.5016 133 0 -24.70 -0.1233 MIMAT0004845 mmu-miR-881* 67588 Rnf41 ucuacACUGACAAUAGAGAGAc ||:||| |:||||||| uggacUGGCUG-UGUCUCUCUg 2 18 876 896 [mm9:10:127876366-127876386:+] 0.6016 163 7 -26.31 -0.4248 MIMAT0004845 mmu-miR-881* 67588 Rnf41 ucuacacUGACAAU--AGAGAGAc ||| | : ||||||| ucaccauACUCUAGCUUCUCUCUg 2 16 468 491 [mm9:10:127877011-127877034:+] 0.5754 142 7 -14.24 -0.1360 MIMAT0004849 mmu-miR-883a-3p 67588 Rnf41 uauGACUCUCGAC---AACGUCAAu :| || ||| |||||||| cucUUCAGCCCUGUGAUUGCAGUUa 2 20 772 796 [mm9:10:127876262-127876286:+] 0.6016 150 7 -14.78 -0.8666 MIMAT0004851 mmu-miR-883b-3p 67588 Rnf41 uaugacucucUAC-AACGUCAAu :|| |||||||| cuucagcccuGUGAUUGCAGUUa 2 13 774 796 [mm9:10:127876264-127876286:+] 0.6016 147 7 -14.69 -0.8632 MIMAT0004864 mmu-miR-297a* 67588 Rnf41 auacccAUAC-ACACAUACAUAu || | | | ||||||| gugacuUAAGAUAUUUAUGUAUa 2 17 1666 1688 [mm9:10:127878209-127878231:+] 0.5016 147 7 -7.86 -1.0383 MIMAT0004866 mmu-miR-297c* 67588 Rnf41 auacccAUAC-ACACAUACAUAu || | | | ||||||| gugacuUAAGAUAUUUAUGUAUa 2 17 1666 1688 [mm9:10:127878209-127878231:+] 0.5016 147 7 -7.86 -1.0383 MIMAT0004868 mmu-miR-343 67588 Rnf41 agACCCGU-GUACUUC-CCUCu ||| :: || |||| |||| acUGGCUGUCAGGAAGAGGAGc 2 19 8 29 [mm9:10:127875498-127875515,127876621-127876624:+] 0.6571 121 0 -19.74 -0.3197 MIMAT0004871 mmu-miR-465b-5p 67588 Rnf41 gucuAGUCGUGGUAAGAUUUAu ||| | | | ||||||| ucucUCA-CUCAACUCUAAAUu 2 19 836 856 [mm9:10:127877379-127877399:+] 0.5971 152 7 -9.74 -0.4103 MIMAT0004873 mmu-miR-465c-5p 67588 Rnf41 gucuAGUCGCGGUAAGAUUUAu ||| | | | ||||||| ucucUCA-CUCAACUCUAAAUu 2 19 836 856 [mm9:10:127877379-127877399:+] 0.5971 152 7 -6.88 -0.4134 MIMAT0004875 mmu-miR-466b-5p 67588 Rnf41 guACAUGU-ACAUGUGUGUGUAg ||| || |:| ||||||| caUGUCCACCAUGCUCACACAUu 2 21 1566 1588 [mm9:10:127878109-127878131:+] 0.5016 155 7 -18.41 -0.4588 MIMAT0004876 mmu-miR-466b-3p 67588 Rnf41 agaauacacacgcACAUACAUAu | ||||||| gugacuuaagauaUUUAUGUAUa 2 11 1666 1688 [mm9:10:127878209-127878231:+] 0.5016 142 7 -7.90 -1.0437 MIMAT0005453 mmu-miR-466b-3-3p 67588 Rnf41 agaauacacacgcACAUACAUAa | ||||||| gugacuuaagauaUUUAUGUAUa 2 11 1666 1688 [mm9:10:127878209-127878231:+] 0.5016 142 7 -5.64 -1.0437 MIMAT0004877 mmu-miR-466c-5p 67588 Rnf41 auACAUGU-ACGUGUGUGUGUAg ||| || ::| ||||||| caUGUCCACCAUGCUCACACAUu 2 21 1566 1588 [mm9:10:127878109-127878131:+] 0.5016 151 7 -19.47 -0.4555 MIMAT0004878 mmu-miR-466c-3p 67588 Rnf41 agaauacacacgcACAUACAUAu | ||||||| gugacuuaagauaUUUAUGUAUa 2 11 1666 1688 [mm9:10:127878209-127878231:+] 0.5016 142 7 -7.90 -1.0437 MIMAT0004879 mmu-miR-466e-5p 67588 Rnf41 auACAUGU-ACAUGUGUGUGUAg ||| || |:| ||||||| caUGUCCACCAUGCUCACACAUu 2 21 1566 1588 [mm9:10:127878109-127878131:+] 0.5016 155 7 -16.31 -0.4588 MIMAT0004880 mmu-miR-466e-3p 67588 Rnf41 agaauacacacgcACAUACAUAu | ||||||| gugacuuaagauaUUUAUGUAUa 2 11 1666 1688 [mm9:10:127878209-127878231:+] 0.5016 142 7 -7.90 -1.0437 MIMAT0004883 mmu-miR-466g 67588 Rnf41 acacacacguacACAGACAUa |||||||| uuucccccacaaUGUCUGUAa 2 10 197 217 [mm9:10:127875687-127875707:+] 0.6119 145 7 -11.01 -1.1819 MIMAT0004883 mmu-miR-466g 67588 Rnf41 acacACACGUACACA-GACAUa ||||| ||||| ||||| ccauUGUGC-UGUGUGCUGUAc 2 18 792 812 [mm9:10:127877335-127877355:+] 0.6899 135 0 -19.14 -0.1467 MIMAT0004887 mmu-miR-467d* 67588 Rnf41 cacauccacACACAUACAUAUa | | |||||||| gacuuaagaUAUUUAUGUAUAu 2 14 1668 1689 [mm9:10:127878211-127878232:+] 0.5016 149 7 -7.31 -0.8009 MIMAT0004890 mmu-miR-509-5p 67588 Rnf41 uaCUA-ACGGUGUAAGACCUCAu |:| | |:| | ||||||| ugGGUCUCCUAGA-ACUGGAGUc 2 21 1762 1783 [mm9:10:127878305-127878326:+] 0.5016 145 7 -15.80 -0.1444 MIMAT0004931 mmu-miR-466d-3p 67588 Rnf41 gauacacacgcACAUACAUAu | ||||||| gacuuaagauaUUUAUGUAUa 2 11 1668 1688 [mm9:10:127878211-127878231:+] 0.5016 142 7 -6.40 -1.0437 MIMAT0004933 mmu-miR-878-3p 67588 Rnf41 agAUGGGUCACACCACA-GUACg |:: | ||||| ||| |||| auUGUGCUGUGUGCUGUACAUGg 2 21 794 816 [mm9:10:127877337-127877359:+] 0.6899 132 0 -18.58 -0.2954 MIMAT0004933 mmu-miR-878-3p 67588 Rnf41 agauggguCACAC-CACA-GUACg ||||| |||| |||| guguguguGUGUGUGUGUGCAUGu 2 15 1642 1665 [mm9:10:127878185-127878208:+] 0.5016 125 0 -18.69 -0.1719 MIMAT0004938 mmu-miR-875-3p 67588 Rnf41 guaucGGAGUCAUAAAAGUCc || | ||||||||| ugguuCCCAAAUAUUUUCAGa 2 17 274 294 [mm9:10:127875764-127875784:+] 0.6119 156 7 -11.82 -1.2323 MIMAT0004938 mmu-miR-875-3p 67588 Rnf41 guauCGGAGUCAUAAAAGUCc |:|| |||||||| caauGUCUGUAAAUUUUCAGu 2 18 206 226 [mm9:10:127875696-127875716:+] 0.6119 149 7 -10.38 -0.5821 MIMAT0005291 mmu-miR-582-5p 67588 Rnf41 ucauugaccaacuuGUUGACAu ||||||| acugagccagcuccCAACUGUa 2 9 1852 1873 [mm9:10:127878395-127878416:+] 0.5179 140 7 -12.53 -0.2205 MIMAT0005293 mmu-miR-467e 67588 Rnf41 uguauauguACGAGUGUGAAUa | || ||||||| auggaacucUCCUGACACUUAa 2 14 1917 1938 [mm9:10:127878460-127878481:+] 0.5341 149 7 -10.47 -0.4304 MIMAT0005294 mmu-miR-467e* 67588 Rnf41 uauauccacACACAUACAUAUa | | |||||||| gacuuaagaUAUUUAUGUAUAu 2 14 1668 1689 [mm9:10:127878211-127878232:+] 0.5016 149 7 -7.31 -0.8009 MIMAT0005830 mmu-miR-466l 67588 Rnf41 uuauacacacgUACAUAAAUau || |||||| uuggcaauuuaAUUUAUUUAcu 3 12 916 937 [mm9:10:127876406-127876427:+] 0.6016 127 0 -3.44 -0.2119 MIMAT0005830 mmu-miR-466l 67588 Rnf41 uuaUACACAC---GUAC-AUAAAUAu ||||||| :| | ||||||| ugcAUGUGUGACUUAAGAUAUUUAUg 2 20 1659 1684 [mm9:10:127878202-127878227:+] 0.5016 157 7 -13.92 -0.5969 MIMAT0005832 mmu-miR-669g 67588 Rnf41 uaGUACAGUUGUGUAUGUUACGu |||| |::|:: ||||||| agCAUG--AGUAUGCACAAUGCa 2 22 1541 1561 [mm9:10:127878084-127878104:+] 0.5016 158 7 -18.93 -0.2135 MIMAT0005834 mmu-miR-466i 67588 Rnf41 aucacacAUAC-ACACAC-ACAUa |:|| |||||| |||| cuuccauUGUGCUGUGUGCUGUAc 2 16 789 812 [mm9:10:127877332-127877355:+] 0.6899 126 0 -14.01 -0.1525 MIMAT0005839 mmu-miR-669f 67588 Rnf41 uaUGCACAC-ACACAUACAUAUAc || | | | | ||||||||| ugACUUAAGAUAUUUAUGUAUAUu 2 22 1667 1690 [mm9:10:127878210-127878233:+] 0.5016 156 7 -6.71 -0.7533 MIMAT0005854 mmu-miR-467g 67588 Rnf41 uauauacacACACAUACAUAu | | ||||||| gacuuaagaUAUUUAUGUAUa 2 13 1668 1688 [mm9:10:127878211-127878231:+] 0.5016 144 7 -6.40 -1.0437 MIMAT0005855 mmu-miR-467h 67588 Rnf41 uguauauguACGUGUGUGAAUa | | ||||||| auggaacucUCCUGACACUUAa 2 14 1917 1938 [mm9:10:127878460-127878481:+] 0.5341 141 7 -9.09 -0.4304 MIMAT0007863 mmu-miR-1902 67588 Rnf41 uucagUACGGAUGACGUGGAGa | | || : ||||||| uaccgAAGACUUUAGCACCUCu 2 18 1070 1091 [mm9:10:127877613-127877634:+] 0.4827 149 7 -18.29 -0.1627 MIMAT0007872 mmu-miR-1906 67588 Rnf41 ucGGGACGGAGUCCGAC-GACGu :||| ::| | ||| |||| guUCCUCUUUGUGCCUGCCUGCc 2 21 675 697 [mm9:10:127877218-127877240:+] 0.6899 120 0 -16.69 -0.3591 MIMAT0007878 mmu-miR-1894-3p 67588 Rnf41 gaGGGAAGUGGGAG---AG-GGAACg |||| | ||:|: || ||||| uuCCCUGCCCCUUUAGGUCUCCUUGu 2 21 132 157 [mm9:10:127876675-127876700:+] 0.5643 123 0 -26.75 -0.2296 MIMAT0007878 mmu-miR-1894-3p 67588 Rnf41 gaGGGAAGUGGGAG---AG-GGAACg |||| | ||:|: || ||||| uuCCCUGCCCCUUUAGGUCUCCUUGu 2 21 80 105 [mm9:10:127876675-127876700:+] 0.5643 123 0 -26.75 -0.5249 MIMAT0009390 mmu-miR-1927 67588 Rnf41 agucagggauuguagGUCUCCAg ||||||| ccucguuguguggggCAGAGGUa 2 9 1306 1328 [mm9:10:127877849-127877871:+] 0.5016 140 7 -16.32 -0.1413 MIMAT0009392 mmu-miR-1929 67588 Rnf41 gagaCGAGAUAUUUCAGGAUCUu || ||: :: ||||||| aagaGCACUG-GGUCUCCUAGAa 2 20 1754 1775 [mm9:10:127878297-127878318:+] 0.5016 145 7 -16.12 -0.1197 MIMAT0009392 mmu-miR-1929 67588 Rnf41 gaGACGAGAUAUUUCAGGAUCUu || || |:|:|| |||||| guCUCCU-UGUGAAACCCUAGAa 2 22 96 117 [mm9:10:127876691-127876712:+] 0.5643 135 6 -18.53 -0.1292 MIMAT0009393 mmu-miR-1930 67588 Rnf41 ugcGAC-GUCCAUGAUACCUCCa ||| | | |: ||||||| acuCUGAGAUGAAUGAUGGAGGa 2 20 726 748 [mm9:10:127877269-127877291:+] 0.6899 150 7 -17.86 -0.5398 MIMAT0009399 mmu-miR-1935 67588 Rnf41 ucucuAGGCGGUCGGAGACGGa ||| |:: |||||||| caccuUCCACUGACCUCUGCCu 2 18 901 922 [mm9:10:127877444-127877465:+] 0.5706 161 7 -24.63 -0.1361 MIMAT0009406 mmu-miR-1941-3p 67588 Rnf41 uacccucuAUGAC-GAUUCUAc | ||| ||||||| cuguauuuUCCUGACUAAGAUc 2 14 249 270 [mm9:10:127875739-127875760:+] 0.6119 148 7 -10.02 -0.4497 MIMAT0009415 mmu-miR-1948 67588 Rnf41 gaCAUG-CUCACGA--GACG-GAUUu |||| :|||:| |||| |||| cuGUACAUGGUGUUCACUGCACUAAu 2 21 807 832 [mm9:10:127877350-127877375:+] 0.6899 126 0 -20.92 -0.7364 MIMAT0009419 mmu-miR-669m 67588 Rnf41 uauacaaacACACCUACAUAUa | | ||||||| gacuuaagaUAUUUAUGUAUAu 2 14 1668 1689 [mm9:10:127878211-127878232:+] 0.5016 141 7 -6.28 -0.8045 MIMAT0009423 mmu-miR-1952 67588 Rnf41 gucuuccUCCCACCUCu ||||||||| uucagucAGGGUGGAGa 2 11 221 237 [mm9:10:127875711-127875727:+] 0.6119 150 7 -23.85 -0.7818 MIMAT0009424 mmu-miR-1953 67588 Rnf41 gucuucggacucuuGAAAGGGu ||||||| ccuuuugcuauauuCUUUCCCc 2 9 182 203 [mm9:10:127875672-127875693:+] 0.6119 140 7 -13.01 -0.9185 MIMAT0009424 mmu-miR-1953 67588 Rnf41 guCUUCGGACUCUUGAA-AGGGu ||: |||| |||| |||| cuGAGCCCUG---ACUUCUCCCa 2 21 56 75 [mm9:10:127875546-127875565:+] 0.5778 120 0 -18.55 -0.2455 MIMAT0009425 mmu-miR-1954 67588 Rnf41 uugucccagagugAGACGUCa ||||||| cuuugcaccaguaUCUGCAGc 2 9 767 787 [mm9:10:127877310-127877330:+] 0.6899 140 7 -12.69 -0.4539 MIMAT0009427 mmu-miR-669n 67588 Rnf41 ugUGUGUAGG---UGUGUGUUUa |:|: |:| | :|||||| aaAUAUUUUCAGAAAGCACAAAg 2 19 282 304 [mm9:10:127875772-127875794:+] 0.6119 129 6 -10.13 -0.1336 MIMAT0009431 mmu-miR-1958 67588 Rnf41 ugaAUGACGA-AGGUGAAAGGAu |::|||| | ||||||| aaaUGUUGCUGAACUCUUUCCUa 2 20 608 630 [mm9:10:127876098-127876120:+] 0.5762 154 7 -20.57 -0.9747 MIMAT0009433 mmu-miR-1960 67588 Rnf41 ucgggagaagAUUGUCGUGACc |:| ||||||| ggggugggcgUGAGAGCACUGg 2 13 659 680 [mm9:10:127876149-127876170:+] 0.5762 148 7 -18.02 -0.1048 MIMAT0009433 mmu-miR-1960 67588 Rnf41 ucGGGAGAAGAUUGUCGU-GACc ||| :| || ||||| ||| aaCCCAUUGCU-CCAGCAGCUGa 2 21 38 59 [mm9:10:127875528-127875549:+] 0.5748 122 0 -16.93 -0.1113 MIMAT0009446 mmu-miR-1971 67588 Rnf41 agaGUCGGGU-CGGAAAUg ::| || ||||||| uggUGGAACAUGCCUUUAa 2 16 1410 1428 [mm9:10:127877953-127877971:+] 0.5016 142 7 -11.66 -0.5176 MIMAT0009458 mmu-miR-1981 67588 Rnf41 cgGUGCAGAU--UCGGGU-CGGAAAUg || || |: :| || ||||||| gcCAGGUAUGGUGGAACAUGCCUUUAa 2 23 1402 1428 [mm9:10:127877945-127877971:+] 0.5016 148 7 -20.42 -0.5141 MIMAT0011210 mmu-miR-2134 67588 Rnf41 cgugGGGCAAAGGGU-UCUg :|:||| |||| ||| uaugUCUGUUGCCCACAGAg 2 16 1727 1746 [mm9:10:127878270-127878289:+] 0.5016 123 0 -15.93 -0.1256 MIMAT0011212 mmu-miR-2136 67588 Rnf41 guguagaGUCAGUUGUGGGUc ||| :||||||| aauaaaaCAG--GACACCCAa 2 15 1499 1517 [mm9:10:127878042-127878060:+] 0.5016 143 7 -15.71 -0.3467 MIMAT0011214 mmu-miR-2138 67588 Rnf41 uaaGGC-GGUUC---GGG--CAAGGGaa |:| |:||| ||| |||||| uucCUGACUAAGAUCCCCUGGUUCCCaa 3 20 256 283 [mm9:10:127875746-127875773:+] 0.6119 128 0 -20.68 -0.1050 MIMAT0011214 mmu-miR-2138 67588 Rnf41 uaaggcggUUCGGGCAAGGGAa || :::||||||| ccaugaagAAAUUUGUUCCCUg 2 15 117 138 [mm9:10:127876660-127876681:+] 0.5643 150 7 -17.18 -0.3085 MIMAT0011214 mmu-miR-2138 67588 Rnf41 uaaggcggUUCGGGCAAGGGAa || :::||||||| ccaugaagAAAUUUGUUCCCUg 2 15 65 86 [mm9:10:127876660-127876681:+] 0.5643 150 7 -17.18 -0.6615 MIMAT0011221 mmu-miR-2145 67588 Rnf41 uuGGUCCGGGCUGGGACGa || | : ||||||| ucCCCUCCAUCACCCUGCa 2 18 58 76 [mm9:10:127876601-127876619:+] 0.6341 141 7 -16.93 -0.1873 MIMAT0012771 mmu-miR-432 67588 Rnf41 gaCGGGUGACUAGA--UGAGGUUCu |:|| || ||:| :||||||| ugGUCC-CU-AUUUGAGCUCCAAGu 2 22 1349 1371 [mm9:10:127877892-127877914:+] 0.5016 152 7 -21.61 -0.1403 MIMAT0015641 mmu-miR-3470b 67588 Rnf41 gguCGGACCAGAUGUCUCACu || | ||| ||||||| acuGCAUUCUCUUCAGAGUGu 2 19 999 1019 [mm9:10:127877542-127877562:+] 0.4787 158 7 -17.97 -0.1809 MIMAT0015644 mmu-miR-1186b 67588 Rnf41 caCCACGUACGGAAAUUAGGGu || ||||||||||||||| guGGAACAUGCCUUUAAUCCCa 2 21 1412 1433 [mm9:10:127877955-127877976:+] 0.5016 184 7 -34.70 -0.2487 MIMAT0000131 mmu-miR-99a 67588 Rnf41 guguucUAGCCUAGAUG-CCCAa :||||:| ||| |||| uacucaGUCGGGU-UACUGGGUu 2 17 649 670 [mm9:10:127877192-127877213:+] 0.6899 122 0 -21.45 -0.2983 MIMAT0000132 mmu-miR-99b 67588 Rnf41 gcguucCAGCCAAGAUG-CCCAc ||||| | ||| |||| uacucaGUCGGGU-UACUGGGUu 2 17 649 670 [mm9:10:127877192-127877213:+] 0.6899 122 0 -19.48 -0.2932 MIMAT0004528 mmu-miR-125a-3p 67588 Rnf41 ccgaGGGUUCUUGGAGUG-GACa |||||| ||||| ||| cuugCCCAAG---CUCACUCUGu 2 19 697 716 [mm9:10:127877240-127877259:+] 0.6899 122 0 -23.33 -0.4511 MIMAT0000150 mmu-miR-138 67588 Rnf41 gcCG-GACUAAGUGU-UGUG-GUCGa || |||:| : |: |||| |||| gaGCACUGGUGUUCGUACACUCAGCa 2 22 672 697 [mm9:10:127876162-127876187:+] 0.5762 123 0 -20.72 -0.1161 MIMAT0000150 mmu-miR-138 67588 Rnf41 gccGGACUAAGUGUU----GUGGUCGa :|||: |: :|| ||||||| uuaUCUGGGUUCUAACCUUCACCAGCc 2 21 233 259 [mm9:10:127876776-127876802:+] 0.5643 147 7 -19.99 -0.4838 MIMAT0000150 mmu-miR-138 67588 Rnf41 gccGGACUAAGUGUU----GUGGUCGa :|||: |: :|| ||||||| uuaUCUGGGUUCUAACCUUCACCAGCc 2 21 181 207 [mm9:10:127876776-127876802:+] 0.5643 147 7 -19.99 -0.8632 MIMAT0000151 mmu-miR-140 67588 Rnf41 gaugguaucccauuUUGGUGAc ||||||| cagccagugcucuuAACCACUg 2 9 1834 1855 [mm9:10:127878377-127878398:+] 0.5016 140 7 -18.38 -0.1790 MIMAT0000159 mmu-miR-149 67588 Rnf41 cccucacuucuGUGCCUCGGUCu ||| ||||||| gugcucuuaacCACUGAGCCAGc 2 13 1840 1862 [mm9:10:127878383-127878405:+] 0.5179 152 7 -16.46 -0.1141 MIMAT0000159 mmu-miR-149 67588 Rnf41 cccucacUUCUG-UGCCUCGGUCu |: || :|||||||| uaaucccAGUACUUUGGAGCCAGc 2 17 1426 1449 [mm9:10:127877969-127877992:+] 0.5016 147 7 -19.47 -0.1229 MIMAT0000215 mmu-miR-186 67588 Rnf41 ucggguuuuccucuUAAGAAAc ||||||| cugccuuuugcuauAUUCUUUc 2 9 179 200 [mm9:10:127875669-127875690:+] 0.6119 140 7 -8.61 -0.5585 MIMAT0000219 mmu-miR-24 67588 Rnf41 gacAAGGACGAC-UUGACUCGGu || || | | |:||||||| ccaUUGCUCCAGCAGCUGAGCCc 2 20 41 63 [mm9:10:127875531-127875553:+] 0.5748 158 7 -21.50 -0.1350 MIMAT0000219 mmu-miR-24 67588 Rnf41 gacaagGACG-AC-UUGACUCGGu | || || | ||||||| augccgCGGCUUGUACCUGAGCCa 2 17 84 107 [mm9:10:127875574-127875597:+] 0.5778 146 7 -21.63 -0.1626 MIMAT0000219 mmu-miR-24 67588 Rnf41 gacaAGGACGACU--UGACUCGGu | || :| | |||||||| ccagUGCUCUUAACCACUGAGCCa 2 19 1837 1860 [mm9:10:127878380-127878403:+] 0.5016 149 7 -19.24 -0.2219 MIMAT0000224 mmu-miR-194 67588 Rnf41 agguguaccucaacGACAAUGu ||||||| gucacaaaccccauCUGUUACc 2 9 835 856 [mm9:10:127876325-127876346:+] 0.6016 140 7 -13.35 -0.6656 MIMAT0000238 mmu-miR-205 67588 Rnf41 gucUGAGGCCACCUUACUUCCu :||:| ||| ||||||| ccuGCUUC--UGGCAUGAAGGa 2 20 115 134 [mm9:10:127875605-127875624:+] 0.6097 156 7 -19.75 -0.2277 MIMAT0000238 mmu-miR-205 67588 Rnf41 gucugaggccaccuUACUUCCu ||||||| uagucaccccccuuAUGAAGGa 2 9 859 880 [mm9:10:127877402-127877423:+] 0.5043 140 7 -14.61 -0.4554 MIMAT0000238 mmu-miR-205 67588 Rnf41 gucugaggCCACCUUA-CUUCCu | |||:|| ||||| ccugugggGUUGGGAUAGAAGGa 2 15 547 569 [mm9:10:127877090-127877112:+] 0.6820 122 0 -22.37 -0.7685 MIMAT0000239 mmu-miR-206 67588 Rnf41 ggUGUGUGAAG-GAAUGUA-AGGu :|||| | | | ||||| ||| auGCACAAUGCACAUACAUGUCCa 2 21 1550 1573 [mm9:10:127878093-127878116:+] 0.5016 127 0 -15.51 -0.2953 MIMAT0000513 mmu-miR-19b 67588 Rnf41 agUCAAAACGUAC-CUAAACGUGu || ||||| || ||||||| gaAG-UUUGCUUGCCCUUUGCACc 2 22 753 775 [mm9:10:127877296-127877318:+] 0.6899 158 7 -13.94 -0.1087 MIMAT0000516 mmu-miR-148a 67588 Rnf41 ugUUUCAAGACAUCACGUG-ACu |:|| ||| | ||||| || uaAGAGCUCU-AACUGCACGUGa 2 21 1223 1244 [mm9:10:127877766-127877787:+] 0.5016 122 0 -13.80 -0.1956 MIMAT0000528 mmu-miR-18a 67588 Rnf41 gaUAGACGUGAUCUACGUGGAAu | || :: || ||||||||| cuAGCU-UGGUA-AUGCACCUUc 2 22 887 907 [mm9:10:127877430-127877450:+] 0.5374 153 7 -16.21 -0.2088 MIMAT0000533 mmu-miR-26a 67588 Rnf41 ucGGAUA-GGACCU-AAU-GAACUu |||:| :|| | ||| ||||| gcCCUGUGAUUGCAGUUAGCUUGAu 2 21 779 803 [mm9:10:127876269-127876293:+] 0.6016 122 0 -14.26 -0.7264 MIMAT0000534 mmu-miR-26b 67588 Rnf41 ugGAUA-GGAC-UUAAU-GAACUu ||:| :|| |:||| ||||| ccCUGUGAUUGCAGUUAGCUUGAu 2 20 780 803 [mm9:10:127876270-127876293:+] 0.6016 121 0 -16.80 -0.7264 MIMAT0000584 mmu-miR-339-5p 67588 Rnf41 gcACUCGA-GGACCUCCU-GUCCCu || :| ||| ||||| ||||| uuUGUUUUCCCUAGAGGAUCAGGGu 2 22 308 332 [mm9:10:127875798-127875822:+] 0.6119 132 0 -24.38 -0.2950 MIMAT0000651 mmu-miR-19a 67588 Rnf41 agUCAAAACGUAU-CUAAACGUGu || ||||| |: ||||||| gaAG-UUUGCUUGCCCUUUGCACc 2 22 753 775 [mm9:10:127877296-127877318:+] 0.6899 154 7 -12.53 -0.1087 MIMAT0000655 mmu-miR-100 67588 Rnf41 guguUCAAGCCUAGAUG-CCCAa || ||||:| ||| |||| acucAG-UCGGGU-UACUGGGUu 2 19 650 670 [mm9:10:127877193-127877213:+] 0.6899 122 0 -21.03 -0.2983 MIMAT0000661 mmu-miR-214 67588 Rnf41 ugacGGACAGACACGGACGACa :| | || |||||||| cacuUCAGGCU-AGCCUGCUGu 2 19 499 519 [mm9:10:127877042-127877062:+] 0.6247 148 7 -21.12 -0.1864 MIMAT0000661 mmu-miR-214 67588 Rnf41 ugACGGACAGACACGGAC-GACa | ||| |:|||||||| ||| ugUUCCUCUUUGUGCCUGCCUGc 2 21 674 696 [mm9:10:127877217-127877239:+] 0.6899 144 0 -25.81 -0.2939 MIMAT0000663 mmu-miR-218 67588 Rnf41 ugUACCAAUCUAGUUCGUGUu || | ||| ||||||| auAUUUUCAGA--AAGCACAa 2 20 284 302 [mm9:10:127875774-127875792:+] 0.6119 148 7 -10.93 -1.0938 MIMAT0000663 mmu-miR-218 67588 Rnf41 uguACCAAUCUA---GUUC-GUGUu || ||| || |||| |||| guuUGUUUAUAUUUCCAAGUCACAa 2 19 817 841 [mm9:10:127876307-127876331:+] 0.6016 121 0 -9.25 -0.8364 MIMAT0000667 mmu-miR-33 67588 Rnf41 acguuaCGUUGAUGUUACGUg |:| |||||||| gcaugaGUAUGCACAAUGCAc 2 16 1542 1562 [mm9:10:127878085-127878105:+] 0.5016 147 7 -17.05 -0.2350 MIMAT0000671 mmu-miR-224 67588 Rnf41 uugccuugGUGAUCACUGAAu ||: ||||||| ugugugugCAUGUGUGACUUa 2 14 1653 1673 [mm9:10:127878196-127878216:+] 0.5016 145 7 -13.38 -0.6485 MIMAT0000679 mmu-miR-217 67588 Rnf41 aggucAGUCAAGG-ACU-ACGUCAu |||| |: ||| |||||| ccucuUCAGCCCUGUGAUUGCAGUu 2 19 771 795 [mm9:10:127876261-127876285:+] 0.6016 125 6 -20.49 -0.3746 MIMAT0004684 mmu-miR-362-3p 67588 Rnf41 acuuaggaACUUGUCC-ACACAa ||:|| || ||||| ucauaggaUGGACUGGCUGUGUc 2 15 868 890 [mm9:10:127876358-127876380:+] 0.6016 122 0 -14.71 -0.2895 MIMAT0000741 mmu-miR-377 67588 Rnf41 uguuuuCA-ACGGAAACACACUa || ||: ||||||| guguguGUGUGUGCAUGUGUGAc 2 17 1648 1670 [mm9:10:127878191-127878213:+] 0.5016 143 7 -11.78 -0.3581 MIMAT0003151 mmu-miR-378 67588 Rnf41 ggaAGACUGAGGU--UCAGGUCa |:||:|| :: ||||||| agcUUUGGCUGUGGCAGUCCAGc 2 19 27 49 [mm9:10:127876622-127876644:+] 0.6533 153 7 -19.58 -0.1343 MIMAT0000748 mmu-miR-383 67588 Rnf41 ucggUGUCAGUGGAAGACUAGa :| || |: ||||||| acugGCUGUGUCUCUCUGAUCu 2 19 879 900 [mm9:10:127876369-127876390:+] 0.6016 150 7 -20.10 -0.4310 MIMAT0001092 mmu-miR-376b 67588 Rnf41 uucaccuACAAGGA-GAUACUa | ||||| |||||| acuaucuUAUUCCUCCUAUGAg 2 15 1609 1630 [mm9:10:127878152-127878173:+] 0.5016 126 6 -13.12 -0.4021 MIMAT0004747 mmu-miR-411 67588 Rnf41 gcauGCGAUAUGCCAGA-UGAu :|||:| :||||| ||| agccUGCUGU-UGGUCUCACUg 2 18 510 530 [mm9:10:127877053-127877073:+] 0.6740 123 0 -19.51 -0.1772 MIMAT0001095 mmu-miR-370 67588 Rnf41 uggucCAAG-GUG-GGGUCGUCCg |||| :|| |:||||||| cugguGUUCGUACACUCAGCAGGa 2 18 677 700 [mm9:10:127876167-127876190:+] 0.5762 159 7 -27.91 -0.2614 MIMAT0004750 mmu-miR-425 67588 Rnf41 aguUGCCCUCACUAGCACA-GUAa ::| | ||| :|||| ||| uguGUGUGUGUGUGUGUGUGCAUg 2 21 1641 1664 [mm9:10:127878184-127878207:+] 0.5016 120 0 -12.52 -0.1486 MIMAT0003112 mmu-miR-489 67588 Rnf41 cgACG-GUAUAUACAC-CACA-GUAa ||: ::|:|:|||| |||| ||| ugUGUGUGUGUGUGUGUGUGUGCAUg 2 22 1639 1664 [mm9:10:127878182-127878207:+] 0.5016 131 0 -17.65 -0.1515 MIMAT0003182 mmu-miR-494 67588 Rnf41 cuCCAAAGGGCACAUACAAAGu ||| |:| | ||||||| aaGGUGACUCUUCCAUGUUUCc 2 21 195 216 [mm9:10:127876738-127876759:+] 0.5643 156 7 -14.89 -0.1021 MIMAT0003182 mmu-miR-494 67588 Rnf41 cuCCAAAGGGCACAUACAAAGu ||| |:| | ||||||| aaGGUGACUCUUCCAUGUUUCc 2 21 143 164 [mm9:10:127876738-127876759:+] 0.5643 156 7 -14.89 -0.2747 MIMAT0003889 mmu-miR-758 67588 Rnf41 aucaccuGGUCCAGUGUUu ||| ||||||| uauauuuCCAAGUCACAAa 2 13 824 842 [mm9:10:127876314-127876332:+] 0.6016 152 7 -15.01 -1.1118 MIMAT0003893 mmu-miR-761 67588 Rnf41 acacAGUCAAAGUGGGACGACg |||| | | ||||||| cacuUCAGGCU-AGCCUGCUGu 2 19 499 519 [mm9:10:127877042-127877062:+] 0.6247 152 7 -20.52 -0.1864 MIMAT0003450 mmu-miR-488 67588 Rnf41 cugguucuuuGUCGGAAAGUu |||||||||| gcacuuagcuCAGCCUUUCAg 2 12 142 162 [mm9:10:127875632-127875652:+] 0.6415 155 7 -20.61 -0.1403 MIMAT0003456 mmu-miR-495 67588 Rnf41 uucuucacgugguACAAACAAa |||||||| uuuccuuugguguUGUUUGUUu 2 10 803 824 [mm9:10:127876293-127876314:+] 0.6016 145 7 -11.68 -1.1665 MIMAT0003486 mmu-miR-491 67588 Rnf41 ggAGUAC--CUUCCCAAGGGGUGa ||| | |:|| ||||||| agUCAGGGUGGAGAAAUCCCCACu 2 21 224 247 [mm9:10:127875714-127875737:+] 0.6119 151 7 -24.15 -0.8158 MIMAT0003486 mmu-miR-491 67588 Rnf41 ggaguaccuucccaaGGGGUGa |||||| uugcuauauucuuucCCCCACa 2 8 186 207 [mm9:10:127875676-127875697:+] 0.6119 120 6 -13.83 -0.2584 MIMAT0003513 mmu-miR-505 67588 Rnf41 ucuuuugguCGUUCACAACUGc | | ||||||| cuguauguuGAAUUUGUUGACc 2 14 1869 1890 [mm9:10:127878412-127878433:+] 0.5341 141 7 -7.05 -0.4094 MIMAT0004854 mmu-miR-876-5p 67588 Rnf41 aucACUAAGU---GUCUCUUUAGGu | | ||| ::||||||||| uuuUCAGUCAGGGUGGAGAAAUCCc 2 20 219 243 [mm9:10:127875709-127875733:+] 0.6119 154 7 -15.19 -0.2636 MIMAT0004855 mmu-miR-876-3p 67588 Rnf41 acuUAAUGAAACAUUUGGUGAu | |:|| | | ||||||| gccAGUGCUCU-U-AACCACUg 2 20 1836 1855 [mm9:10:127878379-127878398:+] 0.5016 147 7 -12.99 -0.1616 MIMAT0004858 mmu-miR-18b 67588 Rnf41 gauuGUCGUGAUC--UACGUGGAAu :||| :|:| ||||||||| uuccUAGC-UUGGUAAUGCACCUUc 2 20 884 907 [mm9:10:127877427-127877450:+] 0.5374 156 7 -18.38 -0.2088 MIMAT0004936 mmu-miR-873 67588 Rnf41 ucCUCUGAGUGUUC-AAGGACg || ||: || | |||||| guGACUCUUCCAUGUUUCCUGa 2 20 198 219 [mm9:10:127876741-127876762:+] 0.5643 123 6 -16.44 -0.3002 MIMAT0004936 mmu-miR-873 67588 Rnf41 ucCUCUGAGUGUUC-AAGGACg || ||: || | |||||| guGACUCUUCCAUGUUUCCUGa 2 20 146 167 [mm9:10:127876741-127876762:+] 0.5643 123 6 -16.44 -0.6402 MIMAT0004937 mmu-miR-875-5p 67588 Rnf41 gugGACUAUUUUGACUCCAUau ||| | |:: |||||| uggCUG-UCAGGAAGAGGUAga 3 20 10 30 [mm9:10:127875500-127875520:+] 0.5719 129 0 -14.10 -0.1057 MIMAT0005850 mmu-miR-1192 67588 Rnf41 uuAAACCAGACAAACAAACAAa ||||| || ||||||||| ccUUUGG--UG-UUGUUUGUUu 2 21 806 824 [mm9:10:127876296-127876314:+] 0.6016 163 7 -17.03 -1.1608

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G009755 Rnf41 Mus musculus 67588

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Rnf41 mmu-miR-693-3p beg:1267 end:1285 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& | ||| ||||||| &5' ------CTGCATAA-AAAGCTG- 3' Rnf41 mmu-miR-876-3p beg:1838 end:1855 pic:3' ACTTAATGAAACATTTGGTGAT 5'& |.|| |||||||. &5' -----TGCTCTT--AACCACTG 3' Rnf41 mmu-miR-467e beg:1925 end:1938 pic:3' TGTATATGTACGAGTGTGAATA 5'& || ||||||| &5' -----------CTGACACTTA- 3' Rnf41 mmu-miR-704 beg:1556 end:1572 pic:3' GATCCTCGTCTCGTGTACAGA 5'& ||| .||||||| &5' ------GCACA-TACATGTC- 3' Rnf41 mmu-miR-2145 beg:58 end:76 pic:3' TTGGTCCGGGC-TGGGACGA 5'& || || ||||||| &5' --CCT--CCATCACCCTGC- 3' Rnf41 mmu-miR-697 beg:1232 end:1251 pic:3' AGAGGTGTCCTGGTCCTACAA 5'& || |||. . ||||||| &5' -CTGCACG---TGAGGATGT- 3' Rnf41 mmu-miR-741 beg:832 end:843 pic:3' AGATGTATCTTACCGTAGAGAGT 5'& |||||||| &5' ---------------ATCTCTCA 3' Rnf41 mmu-miR-205 beg:862 end:881 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& || |||||||| &5' ------CCCCCCTTATGAAGGA 3' Rnf41 mmu-miR-295star beg:1348 end:1364 pic:3' CTTCACACGGGGTGTAAACTCA 5'& |.||| .||||||| &5' -------GTCCC-TATTTGAG- 3' Rnf41 mmu-miR-7astar beg:1868 end:1888 pic:3' ATACCGTCTGACACTAAACAAC 5'& |.| .|| |||||||| &5' ----GTATGTTGA-ATTTGTTG 3' Rnf41 mmu-miR-33 beg:1545 end:1563 pic:3' ACGTTACGTTGATGTTACGTG 5'& |. |||| ||||||||| &5' -GT-ATGC----ACAATGCAC 3' Rnf41 mcmv-miR-M23-2star beg:954 end:973 pic:3' GGTG-GCTATCCCCTGTGCAAGT 5'& ||| || ||||||| &5' -CACACGCTT-----CACGTTC- 3' Rnf41 mmu-miR-759 beg:706 end:717 pic:3' CAGTTTTAACAAACGTGAGACG 5'& |||||||. &5' --------------CACTCTGT 3' Rnf41 mmu-miR-218-1star beg:196 end:215 pic:3' CCACGAACTGCCTTGGTACAAA 5'& |||| |||||||| &5' ------TGACTCTTCCATGTTT 3' Rnf41 mmu-miR-761 beg:1156 end:1174 pic:3' ACACAGTCAAAGTGGGACGACG 5'& ||| || .|||||||. &5' -----CAGC-TC-TCCTGCTGT 3' Rnf41 mmu-miR-214 beg:1158 end:1174 pic:3' TGACGGACAGACACGGACGACA 5'& || ||| |||||||| &5' ---GC---TCT---CCTGCTGT 3' Rnf41 mmu-miR-761 beg:500 end:520 pic:3' ACACAGTCAAAGTGGGACGACG 5'& |||| .| |||||||. &5' ----TCAGGC-TAGCCTGCTGT 3' Rnf41 mmu-miR-214 beg:508 end:520 pic:3' TGACGGACAGACACGGACGACA 5'& ||||||||| &5' -------------GCCTGCTGT 3' Rnf41 mmu-miR-3099 beg:497 end:516 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& || ||.|| |||||||. &5' ---CC-ACTTCAGGCTAGCCTG 3' Rnf41 mmu-miR-1935 beg:903 end:923 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||| |. ||||||||| &5' -----TCCACTGACCTCTGCCT 3' Rnf41 mmu-miR-1958 beg:1187 end:1198 pic:3' TGAATGACGAAGGTGAAAGGAT 5'& ||||||||. &5' -------------ACTTTCCTG 3' Rnf41 mmu-miR-149 beg:1848 end:1862 pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& ||| ||||||| &5' -----------CACTGAGCCAG- 3' Rnf41 mmu-miR-675-3p beg:937 end:954 pic:3' TGACTCGCCAATCCCGTATGTC 5'& || ||||||| &5' -------GGAAACTGCATACA- 3' Rnf41 mmu-miR-546 beg:1787 end:1806 pic:3' CTGAGGCACGGTGGTA 5'& | | .| |||||||| &5' GGTTGTGAGCCACCAT 3' Rnf41 mmu-miR-1981 beg:1415 end:1442 pic:3' CGGTGC--AGATTCGGGTCG-GAAATG 5'& ||.| |.||| |||||. ||||. &5' --CATGCCTTTAATCCCAGTACTTTG- 3' Rnf41 mmu-miR-455star beg:171 end:188 pic:3' GCTACATCAGGTTT-CCGTGTAT 5'& | . |||||||. &5' ---------CTGGCTGGCACATG 3' Rnf41 mmu-miR-378star beg:6 end:22 pic:3' TGTGTCCTGGACCT-CAGTCCTC 5'& |||| ||||||| &5' ---------CTGGCTGTCAGGA- 3' Rnf41 mmu-miR-224 beg:1658 end:1674 pic:3' TTGCCTTGGTGATCACTGAAT 5'& ||. |||||||| &5' --------CATGTGTGACTTA 3' Rnf41 mmu-miR-802 beg:651 end:668 pic:3' TTCCTACTTAGAAACAATGACT 5'& |.|| |||||||. &5' -------AGTCGG-GTTACTGG 3' Rnf41 mcmv-miR-m01-3 beg:236 end:256 pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& | .||. | ||||||| &5' -CTGGGTTCTAA-C-CTTCACC- 3' Rnf41 mcmv-miR-m01-3 beg:453 end:473 pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& |||| .| | ||||||| &5' --GAGG--GCCCCC-CTTCACC- 3' Rnf41 mcmv-miR-m108-2-5p.1 beg:1360 end:1382 pic:3' GCCACGAGCG-CAGCTCACTGGCG 5'& |||| ||. ||||||.| &5' ----GCTCCAAGTTCAGTGACTG- 3' Rnf41 mcmv-miR-m108-2-5p.1 beg:344 end:364 pic:3' GCCACGAGCGCAGCTCACTGGCG 5'& |||| | .|.|||.|.|| &5' ----GCTCTC--TGGGTGGCTGC 3' Rnf41 mcmv-miR-M44-1 beg:552 end:572 pic:3' TGGCGCCGAGACCT--TTTTCTAT 5'& ||.| ||| .||.|||| &5' -----GGTTG-GGATAGAAGGATA 3' Rnf41 mcmv-miR-M87-1 beg:344 end:365 pic:3' CGACGGCGACGGCTGCCGACGGA 5'& ||. || . | ||||||. &5' ---GCT-CTCTGGGTGGCTGCT- 3' Rnf41 mghv-miR-M1-5 beg:834 end:852 pic:3' CTCTGCTGGGCTAGAGTTGAGA 5'& |.| ||||||||| &5' -------CTCTCACTCAACTCT 3' Rnf41 mmu-let-7d beg:909 end:924 pic:3' TTGATACGTTGGATGATGGAGA 5'& .|||| ||.|||. &5' --------GACCT-CTGCCTT- 3' Rnf41 mmu-let-7e beg:678 end:700 pic:3' TTGATATGTTGGA-GGATGGAGT 5'& || .||| |||.|||. &5' --CTTTGT-GCCTGCCTGCCTT- 3' Rnf41 mmu-let-7e beg:909 end:924 pic:3' TTGATATGTTGGAGGATGGAGT 5'& .|||| ||.|||. &5' --------GACCT-CTGCCTT- 3' Rnf41 mmu-miR-101b beg:796 end:812 pic:3' AAGTCGATAGTGTCATGACAT 5'& |||.| ||.||||| &5' ----GCTGT----GTGCTGTA 3' Rnf41 mmu-miR-106a beg:1430 end:1442 pic:3' GATGGACGTGACAATCGTGAAAC 5'& ||.|||||| &5' --------------AGTACTTTG 3' Rnf41 mmu-miR-1186 beg:1415 end:1440 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||||||||| ||||.|||. &5' CATGCCTTTAATCCCAGTACTT 3' Rnf41 mmu-miR-1186b beg:1407 end:1434 pic:3' CACCAC---GTACGGAAATTAGGGT 5'& ||||| |||||||||||||||| &5' -TGGTGGAACATGCCTTTAATCCCA 3' Rnf41 mmu-miR-1191 beg:1313 end:1336 pic:3' ATCCCGA-TGTATCATTCTGAC 5'& |.|||| | .||| |.|.|| &5' TGGGGCAGAGGTAG-AGGGCT- 3' Rnf41 mmu-miR-122 beg:492 end:506 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& || ||||.|| &5' -----------GTTCCACTTCA 3' Rnf41 mmu-miR-124star beg:1582 end:1601 pic:3' TAGTTCCAGGCGACACTTGTGC 5'& || |..|| ||||||| &5' --CATT-TTTGC--TGAACAC- 3' Rnf41 mmu-miR-129-3p beg:1307 end:1337 pic:3' TACGAAAAACCCCA-------TTCCCGAA 5'& |.| ||||| .||||||| &5' --GTTGTGTGGGGCAGAGGTAGAGGGCTT 3' Rnf41 mmu-miR-129-5p beg:1364 end:1386 pic:3' CGTTCGGGT--CTGGC-GTTTTTC 5'& ||||..|| |||.| ||. &5' -CAAGTTCAGTGACTGACAG---- 3' Rnf41 mmu-miR-130bstar beg:385 end:408 pic:3' TCATCACGTTG-TCC-CTTTCTCA 5'& |||| |.| ||| |||||||| &5' ---AGTG-AGCAAGGAGAAAGAGT 3' Rnf41 mmu-miR-135astar beg:1340 end:1359 pic:3' GCGGTGCCGAGGTTAGGGATAT 5'& ||. | .||||||| &5' -GCTTG----CTGGTCCCTAT- 3' Rnf41 mmu-miR-135b beg:1135 end:1154 pic:3' AGTGTATCCTTACTTTTCGGTAT 5'& |..||||.| |.||| || &5' --ATGTAGGGA-GGAAA-CC--- 3' Rnf41 mmu-miR-138 beg:238 end:259 pic:3' GCCGGACTAAG--TGTT-GTGGTCGA 5'& |.||| || ||||||| &5' ------GGTTCTAACCTTCACCAGC- 3' Rnf41 mmu-miR-140 beg:1834 end:1856 pic:3' GATGGTATCCCATTTTGGTGAC 5'& .||| |||||||| &5' --GCCAGTGCTCTTAACCACTG 3' Rnf41 mmu-miR-141star beg:1050 end:1068 pic:3' AGGTTGTGACGTGA-CCTTCTAC 5'& |||||.| |||.|||| &5' -------CTGCATTCGGAGGATG 3' Rnf41 mmu-miR-143 beg:1367 end:1393 pic:3' CTCGATGTCAC-GAA----GTAGAGT 5'& ||.| ||||| || ..||||| &5' -AGTT-CAGTGACTGACAGTGTCTCA 3' Rnf41 mmu-miR-144 beg:794 end:812 pic:3' TCATGTAGTAGATATGACAT 5'& ||.| | |.|.||||| &5' -GTGC----TGTGTGCTGTA 3' Rnf41 mmu-miR-144 beg:1681 end:1706 pic:3' TCATGTAG---TAGATATGACAT 5'& |||.||. .|.| ||||| &5' -GTATATTAATGTTTTGCCTGTA 3' Rnf41 mmu-miR-145 beg:1760 end:1781 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& ||| |||| |.||||||| &5' -GGGTCTCCT---AGAACTGGA- 3' Rnf41 mmu-miR-145star beg:2 end:22 pic:3' GTTC-TTGTCATAAAGGTCCTTA 5'& | ||| | .|||||| &5' ---GTAACTGGCTG-TCAGGAA- 3' Rnf41 mmu-miR-146bstar beg:1109 end:1125 pic:3' TGGTCTTGACTCAGGGATCCCG 5'& ||| |.|||||| &5' -------CTGCC-CTCTAGGG- 3' Rnf41 mmu-miR-151-3p beg:498 end:521 pic:3' GGAGTTCC-TCGGA-GTCAGATC 5'& |.|||.| ||||| | ||. &5' CTTCAGGCTAGCCTGCTGTT--- 3' Rnf41 mmu-miR-151-3p beg:1455 end:1482 pic:3' GGAGT---TCCTCGGAG--TCAGATC 5'& |||| |||.|||| |||.|| &5' -CTCAGTGAGGGGCCTGCAAGTTTA- 3' Rnf41 mmu-miR-154star beg:396 end:417 pic:3' TTATCCAG---TTGGCACATACTAA 5'& || .| .| ||.||||| &5' ----GGAGAAAGAGTG-GTGTGATT 3' Rnf41 mmu-miR-15b beg:631 end:649 pic:3' ACATTTGGTACTACA--CGACGAT 5'& ||| ||||||| &5' ---------TGAAAAAGGCTGCTA 3' Rnf41 mmu-miR-16 beg:628 end:649 pic:3' GCGGTTATAAATGCA---CGACGAT 5'& .|||. ||||||| &5' -------GTTTGAAAAAGGCTGCTA 3' Rnf41 mmu-miR-184 beg:697 end:720 pic:3' TGGGAAT-AGTCAAGAGGCAGGT 5'& .||| ||| |||.|||.| &5' GCCCAAGCTCA---CTCTGTCTA 3' Rnf41 mmu-miR-188-3p beg:1302 end:1321 pic:3' ACGTTTGGGA-C-GTACACCCTC 5'& |||| | ..||||||. &5' ------CCCTCGTTGTGTGGGG- 3' Rnf41 mmu-miR-188-3p beg:250 end:268 pic:3' ACGTTTGGGACGTACACCCTC 5'& ||| || |||||| &5' -----ACCAGCCAAGTGGGA- 3' Rnf41 mmu-miR-1897-5p beg:1510 end:1532 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& ||| |||. |||||| &5' -CCCAACATCCTCT-TCCAAA- 3' Rnf41 mmu-miR-18a beg:887 end:907 pic:3' GATAGACGTGATC--TACGTGGAAT 5'& || .|.| ||||||||| &5' ------GC-TTGGTAATGCACCTT- 3' Rnf41 mmu-miR-18astar beg:1307 end:1324 pic:3' GTCTTCCTCGTGA-ATCCCGTCA 5'& |. |.|||||| &5' --------GTTGTGTGGGGCAG- 3' Rnf41 mmu-miR-18astar beg:1746 end:1767 pic:3' GTCTTC-CTCGTGAATCCCGTCA 5'& .|||| ||||||| |||. &5' TAGAAAAGAGCACT--GGGT--- 3' Rnf41 mmu-miR-18b beg:885 end:907 pic:3' GATTGTCGTGATC--TACGTGGAAT 5'& .||| .|.| ||||||||| &5' ----TAGC-TTGGTAATGCACCTT- 3' Rnf41 mmu-miR-1902 beg:887 end:907 pic:3' TTCAGTACGGATG---ACGTGGAGA 5'& ||.|. |||||||. &5' -------GCTTGGTAATGCACCTT- 3' Rnf41 mmu-miR-1902 beg:1069 end:1091 pic:3' TTCAGTACGGA---TGA---CGTGGAGA 5'& || ||| |||||||| &5' --------CCGAAGACTTTAGCACCTCT 3' Rnf41 mmu-miR-1902 beg:966 end:990 pic:3' TTCAG--TACG-GATGACGTGGAGA 5'& ||. .||| ||||||| .||| &5' --GTTCTGTGCTCTACTGC-TCTC- 3' Rnf41 mmu-miR-1904 beg:54 end:80 pic:3' GGA-GGGAGGTCTCCT--CGTCTTG 5'& ||| ||||||| ||||.| &5' CCTCCCCTCCATCACCCTGCAGGA- 3' Rnf41 mmu-miR-1904 beg:1305 end:1326 pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& |||| .| . | ||.|||||. &5' CCTCGTTGT-GTGGGGCAGAG- 3' Rnf41 mmu-miR-1907 beg:1156 end:1176 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& ||| || ||||||.|| &5' -----CAGCTCTCCTGCTGTTC 3' Rnf41 mmu-miR-1907 beg:501 end:521 pic:3' TGGAGGTCTAGGA--GACGACGAG 5'& |.|||. |. ||||||.| &5' ---TTCAGG-CTAGCCTGCTGTT- 3' Rnf41 mmu-miR-190b beg:1549 end:1572 pic:3' TTGGGTTATA-GTTTGTATAGT 5'& .| ||||. || ||||.|| &5' -GCACAATGCACATACATGTC- 3' Rnf41 mmu-miR-1927 beg:1307 end:1328 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& ||. . ||||||| &5' ---GTTGTGTGGGG-CAGAGGT- 3' Rnf41 mmu-miR-1928 beg:76 end:94 pic:3' CTCG--ACCGTTACATCGA 5'& |||| |||| |||.|| &5' GAGCTTTGGC--TGTGGC- 3' Rnf41 mmu-miR-1929 beg:1755 end:1776 pic:3' GAGACGAGATATTTCAGGATCTT 5'& || ||. |||||||| &5' ----GCACTGGGTC-TCCTAGAA 3' Rnf41 mmu-miR-1929 beg:151 end:170 pic:3' GAGACGAGATATTTCAGGATCTT 5'& .|.|.|| ||||||| &5' -------TTGTGAAACCCTAGAA 3' Rnf41 mmu-miR-1930 beg:726 end:748 pic:3' TGCGACGTCCATGA--TACCTCCA 5'& | ||| || |. ||||||| &5' -CTCTG-AGATGAATGATGGAGG- 3' Rnf41 mmu-miR-1931 beg:761 end:786 pic:3' CGGT-AGCGTGGTCGGGAACGTA 5'& ||| |.|||||||. |||| &5' GCCCTTTGCACCAGTATCTGCA- 3' Rnf41 mmu-miR-1935 beg:1096 end:1117 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||| . | |||.|||||| &5' -GAG--TGGGGAGCTTCTGCC- 3' Rnf41 mmu-miR-1940 beg:271 end:287 pic:3' TTGACGAGGTGGAAGAGTCA--GGAGGTA 5'& |||| .||||| &5' ---------------TCAGATGTCTCCA- 3' Rnf41 mmu-miR-1944 beg:1768 end:1789 pic:3' TTAGTCTTGAACTGTAAGTC-GTGTCTC 5'& .||||| ||. || |||||| &5' ---TAGAAC-TGG-----AGTCACAGA- 3' Rnf41 mmu-miR-1948 beg:971 end:1000 pic:3' GACATGCTC--ACGAGA-----CGGATTT 5'& ||||.| |||||| |||||| &5' CTGTGCTCTACTGCTCTCGTAAGCCTAA- 3' Rnf41 mmu-miR-195 beg:639 end:649 pic:3' CGGTTATAAAGACACGACGAT 5'& ||||||| &5' --------------GCTGCTA 3' Rnf41 mmu-miR-1953 beg:1177 end:1198 pic:3' GTCTTCGGACT---CTTGAAAGGGT 5'& |.||| |.|||||||. &5' ------CTTGACAAGGACTTTCCT- 3' Rnf41 mmu-miR-1957 beg:966 end:987 pic:3' CAGTATACGAGATGGTGAC 5'& ||. |.|||||||| || &5' GTTCTGTGCTCTACTGCT- 3' Rnf41 mmu-miR-1960 beg:1742 end:1765 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& ||.|. || |||||||| &5' AGTCTAGAA--AAGAGCACTGG 3' Rnf41 mmu-miR-1967 beg:999 end:1022 pic:3' CGTAGAAGAGGGGTC-C-TAGGAGT 5'& |||| ||||..||| | .||| &5' GCAT--TCTCTTCAGAGTGTCC--- 3' Rnf41 mmu-miR-1971 beg:499 end:515 pic:3' AGAGTCGGGTCGGAAATG 5'& .|||| |.||||| &5' -TTCAGGCTAGCCT---- 3' Rnf41 mmu-miR-1982star beg:1855 end:1869 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& |||| ||||||| &5' -----CCAG----CTCCCAA 3' Rnf41 mmu-miR-1983 beg:423 end:437 pic:3' TCTTTTGTACGAGGTCCACTC 5'& || .|||||.| &5' ---------GCG-TAGGTGGG 3' Rnf41 mmu-miR-199a-5p beg:288 end:308 pic:3' CTTGTCCATCAGACT--TGTGACCC 5'& |||| |||| ||||||| &5' ---CAGG----CTGACTACACTGG- 3' Rnf41 mmu-miR-199bstar beg:1742 end:1766 pic:3' CTTGTCCATCAGA------TTTGTGACCC 5'& ||||| .|.||||||| &5' --------AGTCTAGAAAAGAGCACTGGG 3' Rnf41 mmu-miR-199bstar beg:288 end:308 pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |||| | || ||||||| &5' ---CAGGCTGACT--ACACTGG- 3' Rnf41 mmu-miR-19a beg:754 end:775 pic:3' AGTCAAAACGTATCT-AAACGTGT 5'& || ||||| ||||||| &5' --AG-TTTGCTTGCCCTTTGCAC- 3' Rnf41 mmu-miR-19b beg:752 end:775 pic:3' AGTCAAAACGTACCT-AAACGTGT 5'& || ||||| || ||||||| &5' --AG-TTTGCTTGCCCTTTGCAC- 3' Rnf41 mmu-miR-201 beg:652 end:670 pic:3' TTCTTGTTACGG---AATGACTCAT 5'& |.| ||||||.|| &5' ---------GTCGGGTTACTGGGT- 3' Rnf41 mmu-miR-202-5p beg:1478 end:1498 pic:3' TTTCTTCATATACGTATCCTT 5'& ||||.| |||. |||||| &5' AAAGGAATATG-GCATAG--- 3' Rnf41 mmu-miR-205 beg:1930 end:1948 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& |||. || |||.||| &5' ---ACTTAAGT----TGAGGGA 3' Rnf41 mmu-miR-210 beg:1538 end:1564 pic:3' AGTCGG---CG-ACAGTG-TGCGTGTC 5'& ||| |. || ||| |.||||| &5' --AGCATGAGTATG-CACAATGCACA- 3' Rnf41 mmu-miR-2132 beg:1261 end:1274 pic:3' GTAGCGCAGTTGTGGGCGG 5'& ||.||||.|| &5' --------CAGCACCTGC- 3' Rnf41 mmu-miR-2140 beg:809 end:830 pic:3' TGGTGGTTCTA--GACGTGGA 5'& ||. . | ||||||. &5' --CATGGTGTTCACTGCACT- 3' Rnf41 mmu-miR-2141 beg:886 end:908 pic:3' TTGAAAAG--ACTGTGGAGGA 5'& |.||| || |||||.| &5' AGCTTGGTAATG-CACCTTC- 3' Rnf41 mmu-miR-2146 beg:269 end:287 pic:3' GTGTACCTTGGGA---AGAGGTG 5'& ||.| |||||| &5' -------AATCAGATGTCTCCA- 3' Rnf41 mmu-miR-215 beg:435 end:456 pic:3' CAGAC-AGTTTAGTATCCAGTA 5'& || || | .| |||||| &5' GTGTGATTGGAG---AGGTCA- 3' Rnf41 mmu-miR-21star beg:1155 end:1175 pic:3' CTGTCGGGTAGCTGACGACAAC 5'& |||||.| || |||||||| &5' -ACAGCTC-TC--CTGCTGTT- 3' Rnf41 mmu-miR-21star beg:501 end:522 pic:3' CTGTCGGGTAGCTGACGACAAC 5'& ||| |.| ||||||||| &5' --CAGGCTAGC--CTGCTGTTG 3' Rnf41 mmu-miR-222 beg:499 end:524 pic:3' TGGGTC--ATCGGTCTAC-ATCGA 5'& ..||| ||||| | || |.|. &5' -TTCAGGCTAGCCTGCTGTTGGT- 3' Rnf41 mmu-miR-223 beg:1372 end:1385 pic:3' ACCCCATAAACTGTTTGACTGT 5'& | .||||||| &5' ----------GT--GACTGACA 3' Rnf41 mmu-miR-23a beg:430 end:445 pic:3' CCTTTAGGGACCGTTACACTA 5'& ||| |.|||||| &5' ---------TGGGAGTGTGAT 3' Rnf41 mmu-miR-23b beg:1237 end:1253 pic:3' CCATTAGGGACCGTTACACTA 5'& | || .|||||| &5' -------CGTGAGGATGTGA- 3' Rnf41 mmu-miR-23b beg:425 end:445 pic:3' CCATTAGGGACCGTTACACTA 5'& |||. ||| |.|||||| &5' -GTAGG---TGGGAGTGTGAT 3' Rnf41 mmu-miR-24 beg:1838 end:1861 pic:3' GACAAGGACGACTTGACTCGGT 5'& || ||.| ||||||||| &5' -TGCTCTTAACC-ACTGAGCCA 3' Rnf41 mmu-miR-27astar beg:1330 end:1357 pic:3' ACGAGTG--TTCGT-CGATTCGGGA 5'& |||.|| .||| |||.. |||| &5' -GCTTACTGGAGCTTGCTGGTCCCT 3' Rnf41 mmu-miR-28 beg:1096 end:1114 pic:3' GAGTTATCTGACA-CTCGAGGAA 5'& || || |||||.|| &5' -------GAGTGGGGAGCTTCT- 3' Rnf41 mmu-miR-28 beg:1116 end:1131 pic:3' GAGTTATCTGACACTCGAGGAA 5'& || |.|||||| &5' ---------CTAGGGGCTCCT- 3' Rnf41 mmu-miR-2861 beg:683 end:704 pic:3' GGCGGGCGG-CGGTCCGGGG 5'& .|||.||| ||| |||| &5' -TGCCTGCCTGCCTTGCCC- 3' Rnf41 mmu-miR-296-3p beg:833 end:852 pic:3' CCTCTCGGAG-GTGGGTTGGGAG 5'& .||| |||.||||.|| &5' ------TCTCTCACTCAACTCT- 3' Rnf41 mmu-miR-297astar beg:1634 end:1659 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-297b-3p beg:1634 end:1659 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-297cstar beg:1634 end:1659 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||||.|||.|. &5' TGTGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-297cstar beg:1644 end:1669 pic:3' ATACCCATACACACATACATAT 5'& |.|| ||.|||||| ||||.|. &5' TGTGTGTGTGTGTGCATGTGTG 3' Rnf41 mmu-miR-299star beg:259 end:277 pic:3' TACATACACCCTGCCATTTGGT 5'& ||||||. ||||.|| &5' ------GTGGGATA-TAAATCA 3' Rnf41 mmu-miR-29b beg:1819 end:1829 pic:3' TTGTGACTAAAGTTTACCACGAT 5'& ||||||| &5' ----------------GGTGCTA 3' Rnf41 mmu-miR-29bstar beg:1387 end:1406 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& .|| . |||||.|||| &5' ----TCAAAGAATGAAGCCAG- 3' Rnf41 mmu-miR-29bstar beg:278 end:294 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& .| ||| ||.|||| &5' ----TCTCCA----AAGCCAG- 3' Rnf41 mmu-miR-29c beg:1819 end:1829 pic:3' ATTGGCTAAAGTTTACCACGAT 5'& ||||||| &5' ---------------GGTGCTA 3' Rnf41 mmu-miR-300star beg:994 end:1015 pic:3' TGTTTCCTATTGG----AGAGAAGTT 5'& ||||. ||||||||. &5' --------TAACTGCATTCTCTTCAG 3' Rnf41 mmu-miR-3099star beg:739 end:754 pic:3' GTTCCCGACCTTCCTTCGACC 5'& ||| ||||.|||| &5' -------TGG-AGGAGGCTG- 3' Rnf41 mmu-miR-30a beg:201 end:237 pic:3' GAAGGT-CAG----CTCCT-------ACAAATGT 5'& |||||| ||. ||||| ||||||. &5' CTTCCATGTTTCCTGAGGAAACTTCCTGTTTAT- 3' Rnf41 mmu-miR-30astar beg:923 end:944 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& | | |.||.| |||.|| &5' ---GAGACCGTCTGTCTGGAA- 3' Rnf41 mmu-miR-30c-2star beg:1853 end:1868 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |||| |||||| &5' ---------AGCCAGCTCCCA- 3' Rnf41 mmu-miR-31star beg:1481 end:1500 pic:3' CTACCGTTATACAACCGTATCGT 5'& || |||| ||||||||.| &5' ---GG-AATA---TGGCATAGTA 3' Rnf41 mmu-miR-327 beg:1005 end:1028 pic:3' TAGGAGT---ACGGGGAGTTCA 5'& ||.||| ||.||||. || &5' -TCTTCAGAGTGTCCCTTTAG- 3' Rnf41 mmu-miR-328 beg:1200 end:1227 pic:3' TGCCTTC--CCG-TCTCTC-CCGGTC 5'& ||.|| ||| ||.||| ||. || &5' --GGGAGATGGCTAGGGAGAGGTAAG 3' Rnf41 mmu-miR-330star beg:174 end:195 pic:3' AGAGACGTCCGGG-ACACGAAACG 5'& || ||| ||||.|||| &5' -----GCTGGCACATGTGTTTTG- 3' Rnf41 mmu-miR-335-5p beg:1594 end:1617 pic:3' TGTAAAAAGCAATAACGAGAACT 5'& ||| ||||.|||| |||| &5' ACACTTTTTGTTACTA-TCTT-- 3' Rnf41 mmu-miR-342-5p beg:1070 end:1091 pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& |.| || |||||||.|| &5' --CGAAGACTT-TAGCACCTCT 3' Rnf41 mmu-miR-345-3p beg:1355 end:1376 pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& .|. || |.|| ||||||| &5' --TTTGAG-CTCCAAGTTCAG- 3' Rnf41 mmu-miR-346 beg:1438 end:1454 pic:3' TCTCCGTCCGTGAGCCCGTCTGT 5'& || .| | ||||||| &5' -------GGAGC-CA-GCAGACA 3' Rnf41 mmu-miR-3470b beg:375 end:393 pic:3' GGTCGGACCAGAT-GTCTCACT 5'& ||| ||| .||||||| &5' ------TGG-CTAGTAGAGTGA 3' Rnf41 mmu-miR-3470b beg:997 end:1019 pic:3' GGTCGGACCAGATGTCTCACT 5'& | || ||| ||||||| &5' -CTGCATTCTCTTCAGAGTG- 3' Rnf41 mmu-miR-3471 beg:1755 end:1770 pic:3' TTACGGAATGTCAACCTAGAGT 5'& .|| |||.|||| &5' --------GCAC-TGGGTCTC- 3' Rnf41 mmu-miR-3471 beg:1441 end:1462 pic:3' TTACGGAATGTCAACCTAGAGT 5'& ||| .||| ||||||| &5' ---GCCA-GCAGACAGATCTCA 3' Rnf41 mmu-miR-3473 beg:475 end:491 pic:3' CCGACTCGGTAGAGAGGT 5'& || |||. ||||||. &5' --CT-AGCT-TCTCTCT- 3' Rnf41 mmu-miR-3473 beg:1850 end:1866 pic:3' CCGACTCGGTAGAGAGGT 5'& |||||||| ||| || &5' --CTGAGCCAGCTC-CC- 3' Rnf41 mmu-miR-361 beg:538 end:565 pic:3' CATGG-GGAC-CTCTAAGACTATT 5'& ||.|| |||| |.|.|| ||||. &5' GTGCCTCCTGTGGGGTTGGGATAG 3' Rnf41 mmu-miR-361 beg:1110 end:1135 pic:3' CATGGG-GA-CCTCTAAGACTATT 5'& |.||| || ||.| |||||| &5' -TGCCCTCTAGGGGCTCCTGATA- 3' Rnf41 mmu-miR-376c beg:1699 end:1719 pic:3' TGCACTTTAAAGG-AGATACAA 5'& || |||||. |||.||| &5' ---TGT-ATTTCTGTCTGTGT- 3' Rnf41 mmu-miR-376cstar beg:1558 end:1575 pic:3' ATTTGTATCTTCCTTATAGGTG 5'& ||||| ||.||||| &5' ---ACATAC-----ATGTCCAC 3' Rnf41 mmu-miR-378 beg:965 end:992 pic:3' GGAAGAC-TGAGGTT-C-AGGTCA 5'& | ||||| .|||.| | ||. || &5' CGTTCTGTGCTCTACTGCTCTCGT 3' Rnf41 mmu-miR-380-3p beg:1260 end:1277 pic:3' TTCTACACCTGGTAT--GATGTAT 5'& ||| ||.|||| &5' ----------CCAGCACCTGCATA 3' Rnf41 mmu-miR-380-3p beg:936 end:952 pic:3' TTCTACACCTGGTATGATGTAT 5'& |||| |||.|||| &5' ------TGGAA---ACTGCATA 3' Rnf41 mmu-miR-421 beg:1858 end:1889 pic:3' CGCGGGTTAAT-TACAG-----ACAACTA 5'& || ||||| |. ||||. |||||| &5' GCTCCCAACTGTATGTTGAATTTGTTGA- 3' Rnf41 mmu-miR-423-5p beg:125 end:145 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& .|.|.|| ||||||||. &5' -----TTTGTTCCCTGCCCCTT- 3' Rnf41 mmu-miR-432 beg:1348 end:1371 pic:3' GACGGGTGACTAGA-TGAGGTTCT 5'& |.|| || |. .||||||| &5' --GTCC-CTATTTGAGCTCCAAG- 3' Rnf41 mmu-miR-432 beg:598 end:617 pic:3' GAC-GGGTGACTAGATGAGGTTCT 5'& || .||| .|||||.|| &5' -TGTTCCA-------GCTCCAGGA 3' Rnf41 mmu-miR-433 beg:860 end:877 pic:3' TGTGGCTCCTCGGGTAGTACTA 5'& |||| ||| |.|||| &5' -CACC------CCCCTTATGA- 3' Rnf41 mmu-miR-434-3p beg:1238 end:1260 pic:3' TCCTCAGCTCACTAC---CAAGTTT 5'& || ||| |||| ||||||| &5' ----GT-GAG-GATGTGAGTTCAAA 3' Rnf41 mmu-miR-449a beg:286 end:309 pic:3' TGGT-CGATTGTTATGTGACGGT 5'& .||| |||.|| ||||||| | &5' GCCAGGCTGAC--TACACTGGC- 3' Rnf41 mmu-miR-449b beg:287 end:310 pic:3' CGGT-CGATTGTTGTGACGGA 5'& |||| |||.|| |||||| || &5' GCCAGGCTGACTACACTGGCT 3' Rnf41 mmu-miR-450a-3p beg:1246 end:1266 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& .|||.| ||| ||.||||. &5' GTGAGTTCAA---ATTCCCAG- 3' Rnf41 mmu-miR-450b-3p beg:1246 end:1266 pic:3' TACGTACGTTTTAC---AAGGGTTA 5'& ||| |. ||||||. &5' ----ATGTGAGTTCAAATTCCCAG- 3' Rnf41 mmu-miR-452 beg:1894 end:1915 pic:3' CAGAGTCAAA-GGAG-ACGTTTGT 5'& || || ||.|||.| &5' ------GTGCACCGAATGTAAATA 3' Rnf41 mmu-miR-455 beg:1637 end:1662 pic:3' CACATATACGGGCAC-CTGACG 5'& ||||.|.||. .||| | ||| &5' GTGTGTGTGTGTGTGTGTGTGC 3' Rnf41 mmu-miR-455 beg:1649 end:1672 pic:3' CACATATACGGGCAC-CTGACG 5'& ||||.|.||| .||| |||| &5' GTGTGTGTGCATGTGTGACT-- 3' Rnf41 mmu-miR-455star beg:1543 end:1566 pic:3' GCTACAT-CAGGTTTCCGTGTAT 5'& || ||| | ||| ||||||| &5' -GA-GTATGCACAAT-GCACATA 3' Rnf41 mmu-miR-464 beg:879 end:898 pic:3' ATAGAGTGTCTTATTTGAACCAT 5'& ||| | |.||||||| &5' --TCTTCCT-----AGCTTGGTA 3' Rnf41 mmu-miR-466a-3p beg:1634 end:1657 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-466a-3p beg:1646 end:1669 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||| ||||.|. &5' ---TGTGTGTGTGTGCATGTGTG 3' Rnf41 mmu-miR-466a-5p beg:1546 end:1570 pic:3' ATACATGTACATGTGTGTGTAT 5'& |||| ||| |.||||.||||. &5' TATGCACAA-TGCACATACATG 3' Rnf41 mmu-miR-466b-3-3p beg:1634 end:1656 pic:3' AGAATACACACGCACATACATAA 5'& |.||||||.||||.|||.| &5' ---TGTGTGTGTGTGTGTGTGT- 3' Rnf41 mmu-miR-466b-3p beg:1634 end:1657 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-466b-5p beg:1563 end:1589 pic:3' GTACATGTAC-ATGTGTGTGTAG 5'& ||||| || |.| |||||||. &5' CATGTCCACCATGCTCACACATT 3' Rnf41 mmu-miR-466c-3p beg:1634 end:1657 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-466c-3p beg:1646 end:1669 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||| ||||.|. &5' ---TGTGTGTGTGTGCATGTGTG 3' Rnf41 mmu-miR-466c-5p beg:1546 end:1572 pic:3' ATACATG-TACGTGTGTGTGTAG 5'& |||| || |||||||.|||..|| &5' TATGCACAATGCACATACATGTC 3' Rnf41 mmu-miR-466d-3p beg:1634 end:1657 pic:3' GATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' -TGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-466e-3p beg:1634 end:1657 pic:3' AGAATACACACGCACATACATAT 5'& |.||||||.||||.|||.|. &5' ---TGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-466f beg:1546 end:1571 pic:3' TGTACGTG-TACGTGTGTGTGCA 5'& .|||||| |||||||.|||.|| &5' -TATGCACAATGCACATACATGT 3' Rnf41 mmu-miR-466f-3p beg:1635 end:1659 pic:3' CACACATACACACACACATAC 5'& ||||||.|||||||||||.|| &5' GTGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-466f-5p beg:1546 end:1571 pic:3' GTACGTG-TACGTGTGTGTGCAT 5'& .|||||| |||||||.|||.|| &5' TATGCACAATGCACATACATGT- 3' Rnf41 mmu-miR-466f-5p beg:1707 end:1729 pic:3' GTACGTGTACGTGTGTGTGCAT 5'& ||. .|| | ||||.||| &5' --TGTCTGTGTGC-CACATGTA 3' Rnf41 mmu-miR-466g beg:1634 end:1658 pic:3' ACACACACGTACACAGACATA 5'& ||||||||..||||| |||.| &5' TGTGTGTGTGTGTGTGTGTGT 3' Rnf41 mmu-miR-466g beg:1644 end:1668 pic:3' ACACACACGTACACAGACATA 5'& ||||||||..|||| |||.| &5' TGTGTGTGTGTGTGCATGTGT 3' Rnf41 mmu-miR-466i beg:1635 end:1658 pic:3' ATCACACATACACACACACATA 5'& ||||||.|||||||||||.| &5' --GTGTGTGTGTGTGTGTGTGT 3' Rnf41 mmu-miR-467a-1star beg:1635 end:1660 pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3' Rnf41 mmu-miR-467a-1star beg:1713 end:1731 pic:3' CACATCCACACACA---TACATATA 5'& |||||| ||||||.| &5' -------TGTGTGCCACATGTATGT 3' Rnf41 mmu-miR-467bstar beg:1635 end:1660 pic:3' CACAACCACACACATACATATA 5'& |||| ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3' Rnf41 mmu-miR-467dstar beg:1635 end:1660 pic:3' CACATCCACACACATACATATA 5'& ||||. ||||||||.|||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3' Rnf41 mmu-miR-467dstar beg:1713 end:1731 pic:3' CACATCCACACACA---TACATATA 5'& |||||| ||||||.| &5' -------TGTGTGCCACATGTATGT 3' Rnf41 mmu-miR-467e beg:1563 end:1586 pic:3' TGTATAT---GTACGAGTGTGAATA 5'& ||||.| ||||||||||| &5' ACATGTCCACCATGCTCACAC---- 3' Rnf41 mmu-miR-467estar beg:1638 end:1661 pic:3' TATATCCACACACATACATATA 5'& |.|. ||||||||.|||.|.| &5' -TGTGTGTGTGTGTGTGTGTGT 3' Rnf41 mmu-miR-467estar beg:1641 end:1660 pic:3' TATATCCACACACATACATATA 5'& ||||||||.|||.|.| &5' ------GTGTGTGTGTGTGTGT 3' Rnf41 mmu-miR-467f beg:1634 end:1658 pic:3' ACATCCACACACACACATATA 5'& |||. ||||||||||||.|.| &5' TGTGTGTGTGTGTGTGTGTGT 3' Rnf41 mmu-miR-467g beg:1646 end:1669 pic:3' TATATACACACACATACATAT 5'& .|.|.|||||||| ||||.|. &5' GTGTGTGTGTGTGCATGTGTG 3' Rnf41 mmu-miR-467g beg:1640 end:1661 pic:3' TATATACACACACATACATAT 5'& |.|.|||||||||.|||.|. &5' -TGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-468 beg:1549 end:1572 pic:3' GTCTGTG-TGCGTGTA-GT-CAGTAT 5'& .||| |.|||||| || ||| &5' ---GCACAATGCACATACATGTC--- 3' Rnf41 mmu-miR-470 beg:596 end:617 pic:3' TGAGTGGTCAC--GGTC-AGGTTCTT 5'& .||| |||| ||||.|| &5' -------GGTGTTCCAGCTCCAGGA- 3' Rnf41 mmu-miR-485star beg:427 end:446 pic:3' CTCTCCTCTCGGCACATACTGA 5'& ||| |.| ||.|||.| &5' ---AGGTGGGA---GTGTGATT 3' Rnf41 mmu-miR-488star beg:226 end:242 pic:3' AACTCTCACGAT-AATAGACCC 5'& ||. ||||||||| &5' ---------CTGTTTATCTGGG 3' Rnf41 mmu-miR-489 beg:1638 end:1664 pic:3' CGACG-GTATATACAC-CACA-GTAA 5'& ||. ..|.|.|||| |||| ||| &5' --TGTGTGTGTGTGTGTGTGTGCAT- 3' Rnf41 mmu-miR-493 beg:1176 end:1196 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& ||| | ||| |||||.||| &5' CCTTG-ACA----AGGACTTTC- 3' Rnf41 mmu-miR-496 beg:1563 end:1583 pic:3' CTCTAACCGGTACAT----TATGAGT 5'& ||||| ||.|||| &5' ---------CATGTCCACCATGCTCA 3' Rnf41 mmu-miR-496 beg:638 end:655 pic:3' CTCTAACCGGTACATTATGAGT 5'& |||.. ||||||| &5' ------GGCTGCT--ATACTCA 3' Rnf41 mmu-miR-503 beg:1158 end:1175 pic:3' GACGTCATGACAAGGGCGACGAT 5'& .|| |||.||||.| &5' -------GCTC-TCCTGCTGTT- 3' Rnf41 mmu-miR-503 beg:501 end:522 pic:3' GACGTCATGACAAGGGCGACGAT 5'& ||| .|| ||.||||.|. &5' ---CAG-GCTAG-CCTGCTGTTG 3' Rnf41 mmu-miR-503star beg:1826 end:1846 pic:3' GGTC-CGTCACCTTTGTTATGAG 5'& .|| |||| ||.|.||| &5' -TAGAGCAGC-----CAGTGCTC 3' Rnf41 mmu-miR-509-5p beg:1761 end:1782 pic:3' TACTAACGGTGTAAGACCTCAT 5'& |.| || ||||||| &5' --GGTCTCCTAGAACTGGAGT- 3' Rnf41 mmu-miR-511 beg:1310 end:1329 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| |.|| |.|||.| &5' ---GTGTGGGGC-AGAGGTA- 3' Rnf41 mmu-miR-540-3p beg:38 end:57 pic:3' GGTCCTAGCTG-GAGACTGGA 5'& ||| |||||||| &5' ----GATACCTGCTCTGACC- 3' Rnf41 mmu-miR-568 beg:1641 end:1664 pic:3' CACACATATGTAAATATGTA 5'& ||||||.|. | |.|.||| &5' GTGTGTGTGTGTGTGTGCAT 3' Rnf41 mmu-miR-574-3p beg:1634 end:1659 pic:3' ACACCCACACACGTACTCGCAC 5'& |||| |||||||..|| |.||| &5' TGTGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-574-3p beg:1646 end:1669 pic:3' ACACCCACACACGTACTCGCAC 5'& |||| ||||||||||| |.| &5' TGTGTGTGTGTGCATGTGTG-- 3' Rnf41 mmu-miR-615-5p beg:444 end:466 pic:3' CTAGGCTCGT-GGCC-CCTGGGGG 5'& ||| .| | ||.||||| &5' -----GAGAGGTCAGAGGGCCCCC 3' Rnf41 mmu-miR-654-3p beg:556 end:574 pic:3' TTCCACTACCAGTCG-TCTGTAT 5'& || .|| .||.||| &5' --------GGATAGAAGGATATA 3' Rnf41 mmu-miR-654-5p beg:1579 end:1602 pic:3' TGTGTACAAGACGTCGAATGGT 5'& |||||| ||.||| | ||. &5' ACACAT-TTTTGCTGAACACT- 3' Rnf41 mmu-miR-666-5p beg:672 end:693 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |.|| | | .||||||.|| &5' -GTTC-CTCT-TTGTGCCTGC- 3' Rnf41 mmu-miR-666-5p beg:93 end:114 pic:3' CCGAGAGTGTCG--AC-ACGGGCGA 5'& || |||| || ||||.|. &5' -----TC-CAGCGTTGATGCCTGT- 3' Rnf41 mmu-miR-669a beg:1540 end:1564 pic:3' TGTACTTGTACGTG---TGTGTTGA 5'& .|||||..|||||| .|||| &5' GCATGAGTATGCACAATGCACA--- 3' Rnf41 mmu-miR-669d beg:1545 end:1571 pic:3' TGTATATGT---ACGTGTGTGTTCA 5'& .|||.|| ||||||.||| || &5' --GTATGCACAATGCACATACATGT 3' Rnf41 mmu-miR-669e beg:1494 end:1513 pic:3' TACTTGTACGTGTG--TGTTCTGT 5'& |.| |||.|||| &5' --------GTAATAAAACAGGACA 3' Rnf41 mmu-miR-669e beg:1547 end:1572 pic:3' TACTTG-TACGTGTGTGTTCTGT 5'& ||| || |||||||.||| | | &5' ATGCACAATGCACATACATGTC- 3' Rnf41 mmu-miR-669f beg:1633 end:1657 pic:3' TATGCACACACACATACATATAC 5'& |.||||||||||.|||.|.|| &5' --ATGTGTGTGTGTGTGTGTGTG 3' Rnf41 mmu-miR-669h-3p beg:1640 end:1665 pic:3' ACACGTACACACATATACGTAT 5'& ||||..|||||||.|.|||||. &5' TGTGTGTGTGTGTGTGTGCATG 3' Rnf41 mmu-miR-669i beg:1639 end:1663 pic:3' CATACGTACACACATATACGT 5'& ||.||..|||||||.|.|||| &5' GTGTGTGTGTGTGTGTGTGCA 3' Rnf41 mmu-miR-669i beg:1707 end:1732 pic:3' CATACGTACACAC-----ATATACGT 5'& ||. |||||| |.||||. &5' ---TGTCTGTGTGCCACATGTATGT- 3' Rnf41 mmu-miR-669j beg:1690 end:1721 pic:3' AC-AAACGTACA------CTCATATACGT 5'& || ||||| ||| | |.|.||| &5' TGTTTTGCCTGTATTTCTGTCTGTGTGC- 3' Rnf41 mmu-miR-669j beg:1638 end:1663 pic:3' ACAAACGTACACTCATATACGT 5'& ||| ||..|||| ||.|.|||| &5' TGTGTGTGTGTGTGTGTGTGCA 3' Rnf41 mmu-miR-669m beg:1635 end:1660 pic:3' TATACAAACACACCTACATATA 5'& .|.||| |||||| |||.|.| &5' GTGTGTGTGTGTGTGTGTGTGT 3' Rnf41 mmu-miR-669m beg:1707 end:1732 pic:3' TATACAAACACACC---TACATATA 5'& ||| |||||| ||||||.| &5' ---TGTCTGTGTGCCACATGTATGT 3' Rnf41 mmu-miR-669m beg:1645 end:1669 pic:3' TATACAAACACACCTACATATA 5'& .|.||| |||||| ||||.|. &5' GTGTGTGTGTGTGCATGTGTG- 3' Rnf41 mmu-miR-671-5p beg:130 end:155 pic:3' GAGGT-CGGGGAGGTCCCGAAGGA 5'& ||| ||||||..||| | |||| &5' -TCCCTGCCCCTTTAGGTC-TCCT 3' Rnf41 mmu-miR-672 beg:1557 end:1583 pic:3' AGTGTGTGT-CATGTGGTTGGAGT 5'& ||||.||| || ||||| |||| &5' -CACATACATGTCCACCATGCTCA 3' Rnf41 mmu-miR-674 beg:1443 end:1465 pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& || || | ||||||||| &5' --CAGCAGACAGATCTCAGTG- 3' Rnf41 mmu-miR-674 beg:1360 end:1378 pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& .|||| .|||||| &5' ------GCTCCAAGTTCAGTG- 3' Rnf41 mmu-miR-676star beg:1125 end:1146 pic:3' CGTTCAGGATTCCA---ACATCTCA 5'& ||||.| |||||.| &5' -----TCCTGATATTAATGTAGGG- 3' Rnf41 mmu-miR-681 beg:684 end:709 pic:3' TC-GACGGACGGT-CGCTC-CGAC 5'& | ||||||||| || ||| &5' -GCCTGCCTGCCTTGCCCAAGCT- 3' Rnf41 mmu-miR-682 beg:809 end:828 pic:3' GTCTGAAGTGACAC---TGACGTC 5'& ||. ||| |||||| &5' -------CATGGTGTTCACTGCA- 3' Rnf41 mmu-miR-688 beg:99 end:116 pic:3' CTTATTCATCAGCGGACGCT 5'& || | .|||||.|| &5' ------GTTGATGCCTGTGA 3' Rnf41 mmu-miR-691 beg:6 end:22 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& ||| || ||||||| &5' ----CTGGCTG---TCAGGAA- 3' Rnf41 mmu-miR-691 beg:616 end:633 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& || ||| ||||||.| &5' --TTGTGC------TCAGGAGT 3' Rnf41 mmu-miR-698 beg:1140 end:1158 pic:3' TCCCTTCCTTTGCTCTTAC 5'& ||.||||||| ||| &5' --GGGAGGAAACCTGAA-- 3' Rnf41 mmu-miR-706 beg:655 end:675 pic:3' AAAAAACTC--TGTCCCAAAGAGA 5'& |.| || ||||||||. &5' ------GGGTTACTGGGTTTCTT- 3' Rnf41 mmu-miR-708 beg:1112 end:1131 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& ||| ||||. .|||||| &5' CCCT-CTAGG-----GGCTCCT- 3' Rnf41 mmu-miR-709 beg:900 end:924 pic:3' AGGAG---GAC-GGAGACGGAGG 5'& |||. ||| |||||||||. &5' -CCTTCCACTGACCTCTGCCTT- 3' Rnf41 mmu-miR-709 beg:677 end:700 pic:3' AGGAGG---ACGGA--GACGGAGG 5'& ||||. ||||| ||||||. &5' -CCTCTTTGTGCCTGCCTGCCTT- 3' Rnf41 mmu-miR-711 beg:1758 end:1770 pic:3' GAATGTAGAGAGGGGCCCAGGG 5'& |.|||||.| &5' -------------CTGGGTCTC 3' Rnf41 mmu-miR-713 beg:1710 end:1729 pic:3' CGACACACGGAAGTCACGT 5'& ||||||||| || ||.| &5' -CTGTGTGCCA-CA-TGTA 3' Rnf41 mmu-miR-717 beg:921 end:942 pic:3' TCTCTTCCATAGAGACAGACTC 5'& ||||. ||||||||. &5' -GAGAGACCG--TCTGTCTGG- 3' Rnf41 mmu-miR-720 beg:1451 end:1468 pic:3' ACCTCCGGGGTCGCTCTA 5'& || |.|||.|||. &5' ---AGATCTCAGTGAGG- 3' Rnf41 mmu-miR-743b-5p beg:1581 end:1600 pic:3' ACTACCTGTGGTCA-GACTTGT 5'& |||.. ||||||| &5' ------ACATTTTTGCTGAACA 3' Rnf41 mmu-miR-743b-5p beg:1269 end:1289 pic:3' ACTACCTGTGG---TCAGACTTGT 5'& .||. || ||||.|| &5' ------GCATAAAAAG-CTGAGCA 3' Rnf41 mmu-miR-758 beg:1770 end:1789 pic:3' ATCACCTGGTC-CAGTGTTT 5'& | || | ||||||.| &5' ----GAACTGGAGTCACAGA 3' Rnf41 mmu-miR-764-3p beg:134 end:155 pic:3' TGTCAACGGTGATA-CCGGAGGA 5'& |||| || ||.||||| &5' -----TGCCCCTTTAGGTCTCCT 3' Rnf41 mmu-miR-764-3p beg:1756 end:1772 pic:3' TGTCAACGGTGATACCGGAGGA 5'& ||||. ||.||||| &5' --------CACTG-GGTCTCCT 3' Rnf41 mmu-miR-764-5p beg:1278 end:1290 pic:3' TCCTCCTGTAC-ACTCGTGG 5'& | ||||||. &5' ----------GCTGAGCAT- 3' Rnf41 mmu-miR-767 beg:802 end:820 pic:3' ACGAGTCTGTTGGTACCACGT 5'& |||| |||||||. &5' TGCTGTA-----CATGGTGT- 3' Rnf41 mmu-miR-767 beg:1821 end:1844 pic:3' ACGA-GTCT-GTTGGTACCACGT 5'& |||| .||| ||.||| |||| &5' TGCTATAGAGCAGCCA--GTGC- 3' Rnf41 mmu-miR-767 beg:499 end:520 pic:3' ACGAGTCTG-TTGGTACCACGT 5'& .||||.| |.|| || ||. &5' --TTCAGGCTAGCC-TGCTGT- 3' Rnf41 mmu-miR-7a beg:1026 end:1045 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& |..|||. || ||.|||| &5' ----CGGAATT-CT-GTTTTCC- 3' Rnf41 mmu-miR-7a beg:192 end:210 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||..| || ||||||| &5' -----AAGGTGAC---TCTTCCA 3' Rnf41 mmu-miR-7a beg:1512 end:1530 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||||| || | ||||||| &5' -CAACA---TC-C---TCTTCCA 3' Rnf41 mmu-miR-7a beg:772 end:795 pic:3' TGTTGTTTTAG-TGATC-AGAAGGT 5'& ||. ||| .| || ||||||| &5' ----CAGTATCTGC-AGCTCTTCCA 3' Rnf41 mmu-miR-7b beg:192 end:210 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||..| || ||||||| &5' -----AAGGTGAC---TCTTCCA 3' Rnf41 mmu-miR-7b beg:1512 end:1530 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||||| || | ||||||| &5' -CAACA---TC-C---TCTTCCA 3' Rnf41 mmu-miR-7b beg:772 end:795 pic:3' TGTTGTTTTAG-TGTTCAGAAGGT 5'& ||. ||| .||. ||||||| &5' ----CAGTATCTGCAGCTCTTCCA 3' Rnf41 mmu-miR-871 beg:343 end:359 pic:3' GTACTGACCGTGATTAGACTTAT 5'& ||| | ||||..|. &5' -------GGCTC---TCTGGGTG 3' Rnf41 mmu-miR-876-5p beg:109 end:131 pic:3' ATCACTAAGTGTCTCTTTAGGT 5'& |||| ||. ||||||.. &5' --GTGACCCATGAAGAAATTT- 3' Rnf41 mmu-miR-876-5p beg:305 end:322 pic:3' ATCACTAAGTGTCTCTTTAGGT 5'& | ||| ||.|||| &5' --------CTCAGTCAAGTCCA 3' Rnf41 mmu-miR-878-5p beg:1808 end:1826 pic:3' ACAGAACTGTAGGTTGATCTAT 5'& ||. ||| ||||||.|. &5' -GTT-TGA-----AACTAGGTG 3' Rnf41 mmu-miR-881star beg:481 end:492 pic:3' TCTACACTGACAATAGAGAGAC 5'& |||||||| &5' --------------TCTCTCTG 3' Rnf41 mmu-miR-882 beg:473 end:491 pic:3' TGATTACGCGATTG-AGAGAGGA 5'& | |||.| ||||||. &5' -------CTCTAGCTTCTCTCT- 3' Rnf41 mmu-miR-883b-5p beg:1445 end:1465 pic:3' ACTGACGATGGGTA-AGAGTCAT 5'& || | || |||||||. &5' -----GC-AGACAGATCTCAGTG 3' Rnf41 mmu-miR-9 beg:1379 end:1397 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||||. .|||||| &5' ----ACAGTGTC----TCAAAGA 3' Rnf41 mmu-miR-93 beg:1417 end:1442 pic:3' GATGGACGTGCTTGTCGTGAAAC 5'& |.||| .| |||.|||||| &5' -TGCCTTTAATCCCAGTACTTTG 3' Rnf41 mmu-miR-712 beg:863 end:881 pic:3' CCATGGCGGGCCCACTTCCTC 5'& ||| ||| ||||||| &5' ---ACCCCCCTTATGAAGGA- 3' Rnf41 mmu-miR-742star beg:1238 end:1255 pic:3' ACTAATCGTTGGTACACTCAT 5'& | | |||||||| &5' ------GTGAGGATGTGAGT- 3' Rnf41 mcmv-miR-m01-2 beg:993 end:1013 pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& |.|||. ||||||||| &5' ------CTAACTGCATTCTCTTC 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rnf41 RAID00069754 mmu-miR-6410 miRNA MIMAT0025163 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00070244 mmu-miR-217-5p miRNA MIMAT0000679 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00082599 mmu-miR-7685-3p miRNA MIMAT0029897 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00107218 mmu-miR-26a-5p miRNA MIMAT0000533 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00131124 mmu-miR-99a-5p miRNA MIMAT0000131 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00144522 mmu-miR-19a-3p miRNA MIMAT0000651 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00146032 mmu-miR-140-5p miRNA MIMAT0000151 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00148173 mmu-miR-1952 miRNA MIMAT0009423 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00211112 mmu-miR-5124b miRNA MIMAT0025136 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00289916 mmu-miR-214-3p miRNA MIMAT0000661 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00294705 mmu-miR-383-5p miRNA MIMAT0000748 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00338834 mmu-miR-7018-3p miRNA MIMAT0027941 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00359474 mmu-miR-7026-3p miRNA MIMAT0027957 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00379445 mmu-miR-875-5p miRNA MIMAT0004937 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00381596 mmu-miR-503-5p miRNA MIMAT0003188 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00391403 mmu-miR-449c-5p miRNA MIMAT0003460 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00422414 mmu-miR-467h miRNA MIMAT0005855 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00517578 mmu-miR-6998-3p miRNA MIMAT0027899 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00547928 mmu-miR-488-3p miRNA MIMAT0003450 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID00603985 mmu-miR-378c miRNA MIMAT0025138 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00619020 mmu-miR-875-3p miRNA MIMAT0004938 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00627696 mmu-miR-6916-5p miRNA MIMAT0027732 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00660363 mmu-miR-6361 miRNA MIMAT0025104 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00664395 mmu-miR-467e-5p miRNA MIMAT0005293 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00723353 mmu-miR-494-3p miRNA MIMAT0003182 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00747829 mmu-miR-7003-5p miRNA MIMAT0027910 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00894834 mmu-miR-7076-5p miRNA MIMAT0028058 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID00899465 mmu-miR-205-5p miRNA MIMAT0000238 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID00924899 mmu-miR-7025-3p miRNA MIMAT0027955 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01031950 mmu-miR-6945-3p miRNA MIMAT0027791 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01109802 mmu-miR-6419 miRNA MIMAT0025175 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01128104 mmu-miR-7068-3p miRNA MIMAT0028043 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01142650 mmu-miR-7094-1-5p miRNA MIMAT0028094 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01170452 mmu-miR-876-5p miRNA MIMAT0004854 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01198374 mmu-miR-206-3p miRNA MIMAT0000239 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01215710 mmu-miR-344i miRNA MIMAT0022503 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01217879 mmu-miR-694 miRNA MIMAT0003474 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01223354 mmu-miR-186-5p miRNA MIMAT0000215 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01261301 mmu-miR-7024-5p miRNA MIMAT0027952 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01278614 mmu-miR-6901-5p miRNA MIMAT0027702 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01304243 mmu-miR-1258-5p miRNA MIMAT0029904 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01311071 mmu-miR-668-5p miRNA MIMAT0017237 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01324996 mmu-miR-1224-3p miRNA MIMAT0017231 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01351304 mmu-miR-218-5p miRNA MIMAT0000663 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID01352554 mmu-miR-194-5p miRNA MIMAT0000224 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01355746 mmu-miR-370-3p miRNA MIMAT0001095 Rnf41 mRNA 67588 Prediction 0.2381 Rnf41 RAID01384582 mmu-miR-6954-5p miRNA MIMAT0027808 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01387933 mmu-miR-7083-3p miRNA MIMAT0028073 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01410098 mmu-miR-876-3p miRNA MIMAT0004855 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01460589 mmu-miR-693-3p miRNA MIMAT0004189 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01486169 mmu-miR-7075-5p miRNA MIMAT0028056 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01497131 mmu-miR-6413 miRNA MIMAT0025166 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID01529399 mmu-miR-138-5p miRNA MIMAT0000150 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID01539240 mmu-miR-6541 miRNA MIMAT0025588 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01564721 mmu-miR-3063-3p miRNA MIMAT0014833 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01675580 mmu-miR-873a-5p miRNA MIMAT0004936 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01699907 mmu-miR-7090-5p miRNA MIMAT0028086 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01699971 mmu-miR-7214-5p miRNA MIMAT0028396 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01701889 mmu-miR-6930-3p miRNA MIMAT0027761 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01709198 mmu-miR-466q miRNA MIMAT0020631 Rnf41 mRNA 67588 CLIP-seq//Prediction 0.6308 Rnf41 RAID01711402 mmu-miR-19b-3p miRNA MIMAT0000513 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID01736469 mmu-miR-6929-3p miRNA MIMAT0027759 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01752973 mmu-miR-6988-5p miRNA MIMAT0027878 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01761218 mmu-miR-7672-5p miRNA MIMAT0029850 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01805074 mmu-miR-5627-3p miRNA MIMAT0022386 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01814544 mmu-miR-18b-5p miRNA MIMAT0004858 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01819085 mmu-miR-7023-5p miRNA MIMAT0027950 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01869926 mmu-miR-7016-3p miRNA MIMAT0027937 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01875056 mmu-miR-326-5p miRNA MIMAT0017027 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01876650 mmu-miR-486b-3p miRNA MIMAT0014944 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01882203 mmu-miR-26b-5p miRNA MIMAT0000534 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01901775 mmu-miR-377-3p miRNA MIMAT0000741 Rnf41 mRNA 67588 CLIP-seq//Prediction 0.6308 Rnf41 RAID01917933 mmu-miR-99b-5p miRNA MIMAT0000132 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID01958591 mmu-miR-3095-3p miRNA MIMAT0014912 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02037527 mmu-miR-7119-5p miRNA MIMAT0028135 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02059294 mmu-miR-1930-3p miRNA MIMAT0017340 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02089970 mmu-miR-7023-3p miRNA MIMAT0027951 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02140296 mmu-miR-143-5p miRNA MIMAT0017006 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02143333 mmu-miR-149-5p miRNA MIMAT0000159 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID02149019 mmu-miR-425-5p miRNA MIMAT0004750 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02246249 mmu-miR-669c-3p miRNA MIMAT0017253 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02264064 mmu-miR-6935-5p miRNA MIMAT0027770 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02327133 mmu-miR-24-3p miRNA MIMAT0000219 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID02333191 mmu-miR-7029-3p miRNA MIMAT0027963 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02361974 mmu-miR-758-3p miRNA MIMAT0003889 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02383195 mmu-miR-376b-3p miRNA MIMAT0001092 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02391258 mmu-miR-761 miRNA MIMAT0003893 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02400379 mmu-miR-33-5p miRNA MIMAT0000667 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02411758 mmu-miR-7030-5p miRNA MIMAT0027964 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02534889 mmu-miR-7002-3p miRNA MIMAT0027907 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID02612652 mmu-miR-28b miRNA MIMAT0019354 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02623119 mmu-miR-7073-5p miRNA MIMAT0028052 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02701888 mmu-miR-29a-5p miRNA MIMAT0004631 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02792893 mmu-miR-1964-5p miRNA MIMAT0017349 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02795572 mmu-miR-7087-3p miRNA MIMAT0028081 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02878570 mmu-miR-6942-5p miRNA MIMAT0027784 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02887868 mmu-miR-6927-3p miRNA MIMAT0027755 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02925534 mmu-miR-290b-5p miRNA MIMAT0029900 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02954451 mmu-miR-100-5p miRNA MIMAT0000655 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID02969930 mmu-miR-18a-5p miRNA MIMAT0000528 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03055979 mmu-miR-6958-3p miRNA MIMAT0027817 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03092787 mmu-miR-491-5p miRNA MIMAT0003486 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID03099585 mmu-miR-298-5p miRNA MIMAT0000376 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03129604 mmu-miR-339-5p miRNA MIMAT0000584 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03134914 mmu-miR-466g miRNA MIMAT0004883 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03163926 mmu-miR-6369 miRNA MIMAT0025113 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03172223 mmu-miR-1192 miRNA MIMAT0005850 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03245766 mmu-miR-7035-5p miRNA MIMAT0027974 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03283000 mmu-miR-489-3p miRNA MIMAT0003112 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03287757 mmu-miR-153-5p miRNA MIMAT0016992 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03308008 mmu-miR-28c miRNA MIMAT0019339 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03346055 mmu-miR-712-5p miRNA MIMAT0003502 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03346141 mmu-miR-362-3p miRNA MIMAT0004684 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03369069 mmu-miR-125a-3p miRNA MIMAT0004528 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03448822 mmu-miR-6941-5p miRNA MIMAT0027782 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03463774 mmu-miR-5129-5p miRNA MIMAT0020640 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03506117 mmu-miR-378a-3p miRNA MIMAT0003151 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03513518 mmu-miR-7035-3p miRNA MIMAT0027975 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03548235 mmu-miR-3544-5p miRNA MIMAT0022353 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03595971 mmu-miR-5133 miRNA MIMAT0020644 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03610813 mmu-miR-194-1-3p miRNA MIMAT0016999 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03646952 mmu-miR-7227-3p miRNA MIMAT0028423 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03657508 mmu-miR-148a-3p miRNA MIMAT0000516 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03669121 mmu-miR-721 miRNA MIMAT0003515 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03741706 mmu-miR-224-5p miRNA MIMAT0000671 Rnf41 mRNA 67588 CLIP-seq//Prediction 0.6308 Rnf41 RAID03845711 mmu-miR-505-3p miRNA MIMAT0003513 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03910047 mmu-miR-495-3p miRNA MIMAT0003456 Rnf41 mRNA 67588 Prediction 0.2202 Rnf41 RAID03964749 mmu-miR-486a-3p miRNA MIMAT0017206 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID03971674 mmu-miR-411-5p miRNA MIMAT0004747 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID04030530 mmu-miR-8100 miRNA MIMAT0031403 Rnf41 mRNA 67588 Prediction 0.1828 Rnf41 RAID04049442 mmu-miR-7085-5p miRNA MIMAT0028076 Rnf41 mRNA 67588 Prediction 0.1828