DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Usp8; Kiaa0055; Ubpy ATTTA 192-3434 3622-3626;3661-3665;3721-3725;3863-3867;4089-4093 Usp8; Kiaa0055; Ubpy WTATTTATW 192-3434 3861-3869 Usp8; Kiaa0055; Ubpy WWATTTAWW 192-3434 3861-3869

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 84092 Usp8 cguUCCGUCAC-CGGACAUGUca ||| | || : |||||| gauAGG-AAUGUAUAUGUACAua 3 20 408 429 [mm9:2:126584750-126584771:+] 0.6412 124 0 -10.18 -0.2416 MIMAT0004521 mmu-miR-15b* 84092 Usp8 aucucgucguUUAUUACUAAGc || ||| |||| uuaauuuuuuAAAAAUAAUUCa 2 13 634 655 [mm9:2:126584976-126584997:+] 0.5703 120 0 -2.85 -0.1820 MIMAT0000129 mmu-miR-30a* 84092 Usp8 cgACGUUUG-UAGGCUGACUUUc ||||::: :| :|||||| gcUGCAGGUGGUAAAGCUGAAAa 2 21 990 1012 [mm9:2:126558934-126558956:+] 0.5092 135 6 -18.90 -0.1229 MIMAT0000137 mmu-miR-126-5p 84092 Usp8 gcgcaugguuuucaUUAUUAc |||||| uuuaauuuuuuaaaAAUAAUu 2 8 633 653 [mm9:2:126584975-126584995:+] 0.5703 120 6 -1.95 -0.1983 MIMAT0000137 mmu-miR-126-5p 84092 Usp8 gcGCAUGGUU--UUCAUUAUUAc | | |||| || ||||||| ccCAUUCCAAUUAAUUAAUAAUu 2 20 1058 1080 [mm9:2:126559002-126559024:+] 0.5092 158 7 -5.96 -0.6697 MIMAT0000154 mmu-miR-142-5p 84092 Usp8 ucaucacgaaagauGAAAUAc |||||| uuugugcacuaaauCUUUAUu 2 8 596 616 [mm9:2:126584938-126584958:+] 0.6002 120 6 -7.43 -0.1249 MIMAT0000154 mmu-miR-142-5p 84092 Usp8 ucaucacgaaagaUGAAAUac |||||| uaaacaaauggaaACUUUAau 3 9 618 638 [mm9:2:126584960-126584980:+] 0.5373 120 0 -5.61 -0.1578 MIMAT0004535 mmu-miR-150* 84092 Usp8 gauaggggguccggaCAUGGUc |||||| uuuauuauucucuugGUACCAa 2 8 288 309 [mm9:2:126584630-126584651:+] 0.5789 120 6 -16.15 -0.1696 MIMAT0004537 mmu-miR-154* 84092 Usp8 uuaucCAGUUGGCACAUACUAa || ||:| ||||||| cuucaGUAUACUGAGUAUGAUa 2 18 131 152 [mm9:2:126558075-126558096:+] 0.5067 157 7 -13.26 -0.6940 MIMAT0004537 mmu-miR-154* 84092 Usp8 uuauccAGUUGGCACAUACUAa |:|::| ||||||| accauuUUAGUCUGGUAUGAUu 2 17 16 37 [mm9:2:126557960-126557981:+] 0.5110 152 7 -12.58 -0.2525 MIMAT0004537 mmu-miR-154* 84092 Usp8 uuaUCCAGUUGGCACAU-ACUAa | || ||::||||| |||| ccaAAGU-AAUUGUGUACUGAUc 2 20 776 797 [mm9:2:126558720-126558741:+] 0.5223 129 0 -14.28 -0.8149 MIMAT0004539 mmu-miR-183* 84092 Usp8 aauaccgggaagccAUUAAGUg ||||||| cuacuagcaccauaUAAUUCAg 2 9 120 141 [mm9:2:126584462-126584483:+] 0.5546 140 7 -7.82 -0.3576 MIMAT0004539 mmu-miR-183* 84092 Usp8 aauaccgggaagccAUUAAGUg ||||||| ccccaaaguuaaaaUAAUUCAu 2 9 256 277 [mm9:2:126584598-126584619:+] 0.5789 140 7 -7.87 -1.1197 MIMAT0004539 mmu-miR-183* 84092 Usp8 aauaccgggaagccAUUAAGUg ||||||| uaauuuuuuaaaaaUAAUUCAu 2 9 635 656 [mm9:2:126584977-126584998:+] 0.5703 140 7 -6.09 -1.2866 MIMAT0000234 mmu-miR-201 84092 Usp8 uucuuguuacggaAUGACUCAu |||||||| cugcucuucaguaUACUGAGUa 2 10 126 147 [mm9:2:126558070-126558091:+] 0.5067 145 7 -14.18 -0.6947 MIMAT0004546 mmu-miR-202-5p 84092 Usp8 uuucuucauauacgUAUCCUu |||||| augaccuagcucagAUAGGAa 2 8 395 415 [mm9:2:126584737-126584757:+] 0.6412 120 6 -7.89 -0.1123 MIMAT0000249 mmu-miR-30e* 84092 Usp8 cgACAUUUG-UAGGCUGACUUUc || |::: :| :|||||| gcUGCAGGUGGUAAAGCUGAAAa 2 21 990 1012 [mm9:2:126558934-126558956:+] 0.5092 127 6 -12.85 -0.1229 MIMAT0000367 mmu-miR-291a-5p 84092 Usp8 ucucucccggaggUGAAACUac ||||||| cugcacauauuaaACUUUGAga 3 10 504 525 [mm9:2:126558448-126558469:+] 0.5044 125 0 -10.73 -0.1348 MIMAT0004573 mmu-miR-293* 84092 Usp8 guuuuacagugugucAAACUCa |||||| cugcacauauuaaacUUUGAGa 2 8 504 525 [mm9:2:126558448-126558469:+] 0.5044 120 6 -10.90 -0.1668 MIMAT0004574 mmu-miR-294* 84092 Usp8 ucuaucccggagGUAAAACUCa | ||||||| auuucaaaacaaCUUUUUGAGu 2 11 231 252 [mm9:2:126584573-126584594:+] 0.5789 142 7 -9.56 -0.7264 MIMAT0004574 mmu-miR-294* 84092 Usp8 ucuaucccggagguaAAACUCa |||||| cugcacauauuaaacUUUGAGa 2 8 504 525 [mm9:2:126558448-126558469:+] 0.5044 120 6 -6.52 -0.1733 MIMAT0004575 mmu-miR-295* 84092 Usp8 cuucacaCGGGGUGUAAACUCa |: : ::||||||| aaccauaGUGUAGUAUUUGAGa 2 16 88 109 [mm9:2:126558032-126558053:+] 0.5067 143 7 -14.03 -0.6516 MIMAT0004575 mmu-miR-295* 84092 Usp8 cuucacacgggguguAAACUCa |||||| cugcacauauuaaacUUUGAGa 2 8 504 525 [mm9:2:126558448-126558469:+] 0.5044 120 6 -9.83 -0.1716 MIMAT0004578 mmu-miR-300* 84092 Usp8 uguuuccUAUUGGAGAGAAGUu || :|: ||||||| ucuggucAUCGCUCCUCUUCAc 2 16 311 332 [mm9:2:126558255-126558276:+] 0.5009 151 7 -11.90 -0.1369 MIMAT0004578 mmu-miR-300* 84092 Usp8 uguuuccuaUUGGAGAGAAGUu |:|: ||||||| ccacucagcAGCUGCUCUUCAg 2 14 115 136 [mm9:2:126558059-126558080:+] 0.5067 149 7 -15.37 -0.1978 MIMAT0004622 mmu-let-7c-1* 84092 Usp8 ccuuucgaucuuccaACAUGUc |||||| agauaggaauguauaUGUACAu 2 8 407 428 [mm9:2:126584749-126584770:+] 0.6412 120 6 -7.70 -0.1406 MIMAT0004627 mmu-miR-20a* 84092 Usp8 gaAAUU-CACGAGCAUU-ACGUCa ||:| || ||| || ||||| uaUUGACGU-CUCCAAAUUGCAGc 2 21 21 43 [mm9:2:126584363-126584385:+] 0.5631 121 0 -11.16 -0.5007 MIMAT0004628 mmu-miR-21* 84092 Usp8 cugUCGGGUAGCUGACGACAAc | :| : | | ||||||| auaAUUCAGGCCAGUGCUGUUu 2 20 133 154 [mm9:2:126584475-126584496:+] 0.5789 147 7 -17.18 -0.5851 MIMAT0004629 mmu-miR-22* 84092 Usp8 auUUCGAACGGUGACUUCUUga || ||| | ||||||| aaAAUCUU---AAUGAAGAA-- 3 21 670 686 [mm9:2:126585012-126585028:+] 0.6033 132 0 -7.60 -0.1889 MIMAT0004636 mmu-miR-93* 84092 Usp8 gccCUUCAC-GAUCGAGUCGUCa ||: || | | |||||||| ugaGAGAUGACCA-CUCAGCAGc 2 20 105 126 [mm9:2:126558049-126558070:+] 0.5067 152 7 -19.01 -0.1553 MIMAT0004636 mmu-miR-93* 84092 Usp8 gcccuucACGAUCGAGUC-GUCa ||| | ||||| ||| ggagccaUGCCACCUCAGCCAGc 2 16 353 375 [mm9:2:126558297-126558319:+] 0.5009 123 0 -16.39 -0.5415 MIMAT0000544 mmu-miR-129-3p 84092 Usp8 uacgaaaaaccccAUUCCCGAa |||||||| uccauaguaaauuUAAGGGCUg 2 10 527 548 [mm9:2:126558471-126558492:+] 0.5085 145 7 -11.22 -0.8779 MIMAT0000556 mmu-miR-324-3p 84092 Usp8 ucgUCGUGGACCCCGUCACc | :| || ||||||| augAUUAAAUGUGGCAGUGu 2 18 32 51 [mm9:2:126557976-126557995:+] 0.5110 149 7 -13.51 -0.5213 MIMAT0000558 mmu-miR-325* 84092 Usp8 ugugaaUGACUC--GUG-GAUGAUCc ||||:| ::: ||||||| cagaacACUGGGGCUGUGCUACUAGc 2 18 102 127 [mm9:2:126584444-126584469:+] 0.5303 147 7 -20.62 -0.1036 MIMAT0000605 mmu-miR-350 84092 Usp8 cuuucacauacccgAAACACuu |||||| ggcuuccggcuguaUUUGUGca 3 9 582 603 [mm9:2:126584924-126584945:+] 0.6632 120 0 -8.06 -0.1429 MIMAT0000605 mmu-miR-350 84092 Usp8 cuuucacauACCCGAAACACUu || ||||||| gcuguuagcUGUUAUUUGUGAu 2 14 545 566 [mm9:2:126558489-126558510:+] 0.5085 141 7 -9.18 -0.7426 MIMAT0004660 mmu-miR-19a* 84092 Usp8 caucacGUUGAUACGUUUUGAu ::|| : |||||||| aggaaaUGACAGGGCAAAACUa 2 17 550 571 [mm9:2:126584892-126584913:+] 0.6010 152 7 -13.02 -0.7667 MIMAT0004660 mmu-miR-19a* 84092 Usp8 caUCACGUUGAU-ACGUUUUGau ||| || :|| | |||||| ggAGU-CAUUUAUUUCAAAACaa 3 21 221 242 [mm9:2:126584563-126584584:+] 0.5789 137 0 -8.98 -0.1395 MIMAT0004660 mmu-miR-19a* 84092 Usp8 caucacguugauacgUUUUGAu |||||| uuuuucuuuuucagaAAAACUa 2 8 728 749 [mm9:2:126558672-126558693:+] 0.5129 120 6 -8.22 -0.1772 MIMAT0004661 mmu-miR-28* 84092 Usp8 agGUCGUCGAGUGUUAGAUCAc ::|:| : :: :||||||| ccUGGUAUUGUGAGAUCUAGUg 2 21 651 672 [mm9:2:126558595-126558616:+] 0.5310 148 7 -17.70 -0.3086 MIMAT0004662 mmu-miR-139-3p 84092 Usp8 gagguugucccggcGCAGAGGu ||||||| ugucggcuuauugaCGUCUCCa 2 9 13 34 [mm9:2:126584355-126584376:+] 0.5689 140 7 -22.12 -1.1903 MIMAT0004663 mmu-miR-200c* 84092 Usp8 ggUUUGUGACG-ACCCAUUCUGc |||:| | | | || |||| uaAAAUAAUUCAUUAGUCAGACa 2 21 265 287 [mm9:2:126584607-126584629:+] 0.5789 123 0 -6.41 -0.1664 MIMAT0004664 mmu-miR-214* 84092 Usp8 cgugucGUUCACAU-CUGUCCgu :||| | |||||| cuuucuUAAGGAAAUGACAGGgc 3 17 542 564 [mm9:2:126584884-126584906:+] 0.6010 123 0 -13.20 -0.1301 MIMAT0004666 mmu-miR-33* 84092 Usp8 cacuacgugacaccUUUGUAAc ||||||| auaauuggaaaucuAAACAUUc 2 9 1075 1096 [mm9:2:126559019-126559040:+] 0.5050 140 7 -5.30 -0.1451 MIMAT0004666 mmu-miR-33* 84092 Usp8 cacuacgugacaccUUUGUAac |||||| aaaaacuauaaauuAAACAUaa 3 9 742 763 [mm9:2:126558686-126558707:+] 0.4948 120 0 -2.60 -0.2461 MIMAT0000672 mmu-miR-199b* 84092 Usp8 cuUGUCCAUCAGAU-UUGUGACCc | ||| | || | |||||||| guAGAGGGAUUCCAGAACACUGGg 2 22 90 113 [mm9:2:126584432-126584455:+] 0.5303 164 7 -22.41 -0.1775 MIMAT0000706 mmu-miR-362-5p 84092 Usp8 uaaguguggauccaaggUUCCUAa |||||| uucugugaaagccuagaAAGGAUu 2 8 479 502 [mm9:2:126584821-126584844:+] 0.6010 120 6 -15.38 -0.1077 MIMAT0003387 mmu-miR-376a* 84092 Usp8 ugaguaucuuccucuUAGAUGg |||||| aaauaauucauuuacAUCUACa 2 8 646 667 [mm9:2:126584988-126585009:+] 0.5703 120 6 -9.67 -0.6929 MIMAT0000742 mmu-miR-378* 84092 Usp8 ugUGUCCUGGACCUCAGUC-CUc |:|| |||| ||||| || ucAUAGCACCU--CGUCAGAGAc 2 21 1106 1126 [mm9:2:126559050-126559070:+] 0.5008 121 0 -20.11 -0.1536 MIMAT0000745 mmu-miR-380-3p 84092 Usp8 uucuacaccugguauGAUGUAu |||||| auaauucauuuacauCUACAUu 2 8 648 669 [mm9:2:126584990-126585011:+] 0.5703 120 6 -9.28 -0.3247 MIMAT0004704 mmu-miR-335-3p 84092 Usp8 ccaguccucguuAUUACUUUUu |||||||:| acauuaaaaucuUAAUGAAGAa 2 11 665 686 [mm9:2:126585007-126585028:+] 0.6033 134 0 -7.79 -0.1478 MIMAT0004704 mmu-miR-335-3p 84092 Usp8 ccaguccucguuaUUACUUUUu ||||:||| uuuauucuaaacaAAUGGAAAc 2 10 611 632 [mm9:2:126584953-126584974:+] 0.6002 129 0 -4.57 -0.1133 MIMAT0001090 mmu-miR-409-3p 84092 Usp8 uccccAAGUGGCUCGU-UGUAAg ||||:: : || ||||| aauaaUUCAUUAGUCAGACAUUu 2 18 268 290 [mm9:2:126584610-126584632:+] 0.5789 121 0 -9.89 -1.0972 MIMAT0001093 mmu-miR-411* 84092 Usp8 ccaaucaccuggcacAAUGUAu |||||| uuaaaaauaauucauUUACAUc 2 8 642 663 [mm9:2:126584984-126585005:+] 0.5703 120 6 -4.02 -0.3074 MIMAT0002106 mmu-miR-465a-5p 84092 Usp8 aguguagucacGGUAAGAUUUau ::|||||||| gcacuaaaucuUUAUUCUAAAca 3 13 601 623 [mm9:2:126584943-126584965:+] 0.6002 132 0 -11.24 -0.3909 MIMAT0002107 mmu-miR-466a-3p 84092 Usp8 agaaUACACACGCACAUACAUau || | :|| |||||| ucagAUAGGAAUGUAUAUGUAca 3 20 405 427 [mm9:2:126584747-126584769:+] 0.6412 131 0 -7.31 -0.1863 MIMAT0002108 mmu-miR-467a-1* 84092 Usp8 cacauccacacaCAUACAUAUa | ||||||| uagcucagauagGAAUGUAUAu 2 11 401 422 [mm9:2:126584743-126584764:+] 0.6412 142 7 -8.65 -0.8103 MIMAT0002112 mmu-miR-471 84092 Usp8 cacuUUUCGUGAUAUGAUGCAu ||| | || ||||||| uuuuAAA--AAUAAACUACGUg 2 19 807 826 [mm9:2:126558751-126558770:+] 0.5411 151 7 -13.36 -0.9977 MIMAT0003120 mmu-miR-483* 84092 Usp8 uucugcccuccccUCCUCAcu |||||| acgcauuccuuacAGGAGUca 3 9 207 227 [mm9:2:126584549-126584569:+] 0.5789 120 0 -7.65 -0.1076 MIMAT0003127 mmu-miR-484 84092 Usp8 uagcccuccccugacUCGGACu |||||| agaaagaaagaaaacAGCCUGa 2 8 165 186 [mm9:2:126584507-126584528:+] 0.5789 120 6 -12.08 -0.3020 MIMAT0003173 mmu-miR-547 84092 Usp8 gagugaguuucuaCAUGGUUc ||||||| uauuauucucuugGUACCAAa 2 9 290 310 [mm9:2:126584632-126584652:+] 0.5789 140 7 -13.70 -0.9763 MIMAT0004789 mmu-miR-450a-3p 84092 Usp8 uacuuacguuucguaGGGGUUa |||||| aacuuuuugagucugCCCCAAa 2 8 241 262 [mm9:2:126584583-126584604:+] 0.5789 120 6 -11.82 -0.2057 MIMAT0003189 mmu-miR-291b-5p 84092 Usp8 ccucucccggaggUGAAACUag ||||||| cugcacauauuaaACUUUGAga 3 10 504 525 [mm9:2:126558448-126558469:+] 0.5044 125 0 -11.25 -0.1348 MIMAT0003190 mmu-miR-291b-3p 84092 Usp8 uguUUGUUUUACCUACGUGAaa ::| : || :|||||| uccGGCUGUAUUUGUGCACUaa 3 20 586 607 [mm9:2:126584928-126584949:+] 0.6632 127 0 -8.31 -0.2126 MIMAT0005460 mmu-miR-1224 84092 Usp8 gaggUGGAGGG--GUCAGGAGUg || |:|| ||||||||| cuaaACAUUCCAACAGUCCUCAu 2 18 1087 1109 [mm9:2:126559031-126559053:+] 0.5008 160 7 -25.06 -0.4372 MIMAT0004187 mmu-miR-744 84092 Usp8 acGACAAUCGGGAUCGGGG-CGu :| | | ::|||||||| || ucUUCUCAUUUCUAGCCCCAGCu 2 21 349 371 [mm9:2:126584691-126584713:+] 0.5789 128 0 -20.63 -0.3696 MIMAT0003728 mmu-miR-374* 84092 Usp8 gaGCCUGUUACUAUUAU-GUUGg | || || | |||| |||| agCUGAAAAAAAAAAUAGCAACa 2 21 1004 1026 [mm9:2:126558948-126558970:+] 0.5092 124 0 -5.35 -1.1763 MIMAT0003731 mmu-miR-671-5p 84092 Usp8 gaGGUCGGGGAGGU-CCCGAAGGa |:| ::::||:: ||||||| aaCUA-UUUUUCUGUUGGCUUCCg 2 22 567 589 [mm9:2:126584909-126584931:+] 0.6321 146 7 -18.54 -0.7854 MIMAT0003733 mmu-miR-665 84092 Usp8 ucccUGGAGUCGGAGG-ACCa ||| || :|||| ||| uauuACCCCAUUCUCCGUGGu 2 17 906 926 [mm9:2:126558850-126558870:+] 0.5107 124 0 -18.82 -0.1833 MIMAT0003734 mmu-miR-667 84092 Usp8 gaacccgACCCACCGUCCACAGu || | | ||||||| acagacgUGCCUAGAAGGUGUCu 2 17 399 421 [mm9:2:126558343-126558365:+] 0.5011 148 7 -12.52 -0.2161 MIMAT0014815 mmu-miR-3099* 84092 Usp8 guucccgaccuucCUUCGACc ||||||| agguacuuuccucGAAGCUGu 2 9 834 854 [mm9:2:126558778-126558798:+] 0.5322 140 7 -11.38 -0.3043 MIMAT0004823 mmu-miR-666-3p 84092 Usp8 ucguccgCUAGUGCGACGUCGg ||| ||||||||| gauaaugGAU--CGCUGCAGCu 2 16 65 84 [mm9:2:126584407-126584426:+] 0.5438 152 7 -21.51 -0.2800 MIMAT0003897 mmu-miR-759 84092 Usp8 caguuuuaacaaACGUGAGACg ||||||||| gccccagcucagUGCACUCUGa 2 11 363 384 [mm9:2:126584705-126584726:+] 0.6100 150 7 -17.04 -0.4564 MIMAT0003740 mmu-miR-674 84092 Usp8 auguGGUGAGGGUAGAGUCACg |:| |||| ||||||| auuuCUAGCCCCAGCUCAGUGc 2 19 356 377 [mm9:2:126584698-126584719:+] 0.6100 162 7 -24.89 -0.2131 MIMAT0003461 mmu-miR-683 84092 Usp8 cuCCUGUGUCGA--A-UGUCGUCc ||::||||:| | ||||||| caGGGUACAGUUGAUCACAGCAGg 2 20 212 235 [mm9:2:126558156-126558179:+] 0.5006 161 7 -31.42 -0.1845 MIMAT0003462 mmu-miR-684 84092 Usp8 aaCUGAACU-UCCC-UUUUGa || ||| |||| ||||| agGAAAUGACAGGGCAAAACu 2 18 550 570 [mm9:2:126584892-126584912:+] 0.6010 124 0 -15.56 -0.8030 MIMAT0003469 mmu-miR-690 84092 Usp8 aaaccaacACUCGGAUCGGAAa | | | ||||||| gacacaguUUAACAUAGCCUUc 2 15 460 481 [mm9:2:126584802-126584823:+] 0.6140 146 7 -9.42 -0.6792 MIMAT0003472 mmu-miR-693-5p 84092 Usp8 cuUUUGA-AAGCCUAC-ACCGAc ||||| ||: || ||||| caAAACUAUUUUUCUGUUGGCUu 2 20 564 586 [mm9:2:126584906-126584928:+] 0.6321 122 0 -9.85 -0.4301 MIMAT0004189 mmu-miR-693-3p 84092 Usp8 aauguCGGUGUAGAC--UUUCGACg ||::|| || ||||||| cuuucGCUGCAGGUGGUAAAGCUGa 2 19 985 1009 [mm9:2:126558929-126558953:+] 0.5092 153 7 -16.98 -0.8540 MIMAT0003474 mmu-miR-694 84092 Usp8 gaaguccguuguAAAAGUc |||||| gaaauuuuuucuUUUUCAg 2 8 723 741 [mm9:2:126558667-126558685:+] 0.5310 120 6 -6.67 -0.1360 MIMAT0003476 mmu-miR-669b 84092 Usp8 uguacguguacguguGUUUUGa |||||| aggagucauuuauuuCAAAACa 2 8 220 241 [mm9:2:126584562-126584583:+] 0.5789 120 6 -7.78 -0.1881 MIMAT0003478 mmu-miR-467b* 84092 Usp8 cacaaccacacaCAUACAUAUa | ||||||| uagcucagauagGAAUGUAUAu 2 11 401 422 [mm9:2:126584743-126584764:+] 0.6412 142 7 -7.03 -0.8103 MIMAT0003479 mmu-miR-669c 84092 Usp8 ugUGUGUAGG--UGUG---UGUUGAUa | ||| || |||: ||||||| gaAAACAGCCUGACAUUUAACAACUAu 2 21 174 200 [mm9:2:126584516-126584542:+] 0.5789 150 7 -14.10 -1.0974 MIMAT0003479 mmu-miR-669c 84092 Usp8 ugUGUGUAGGUGUGUGUUGAUa |:| ||:||: :||| ||| aaAUA-AUUCAUUUACAUCUAc 2 21 646 666 [mm9:2:126584988-126585008:+] 0.5703 130 0 -10.81 -0.1492 MIMAT0004827 mmu-miR-297b-3p 84092 Usp8 auacCCAUAC--ACACAUACAUau | || | ||| |||||| cucaGAUAGGAAUGUAUAUGUAca 3 19 404 427 [mm9:2:126584746-126584769:+] 0.6412 133 0 -8.90 -0.1811 MIMAT0003498 mmu-miR-708* 84092 Usp8 gaucuucgagugUCAGAUCAAc | ||||||| cuguuauuugugAUUCUAGUUu 2 11 553 574 [mm9:2:126558497-126558518:+] 0.5085 142 7 -7.32 -0.8675 MIMAT0003504 mmu-miR-713 84092 Usp8 cgacacacggaAGUCACGu ||||||| cuagccccagcUCAGUGCa 2 9 360 378 [mm9:2:126584702-126584720:+] 0.6100 140 7 -15.70 -0.4256 MIMAT0003505 mmu-miR-714 84092 Usp8 cgcuGGCUGGCCGGGAGCAGc |: |: | ||||||| agucCUCAUAGCACCUCGUCa 2 18 1101 1121 [mm9:2:126559045-126559065:+] 0.5008 145 7 -16.87 -0.7000 MIMAT0003508 mmu-miR-501-5p 84092 Usp8 aaagugggucccUGUUUCCUAa | ||||||| cugugaaagccuAGAAAGGAUu 2 11 481 502 [mm9:2:126584823-126584844:+] 0.6010 142 7 -14.95 -0.9992 MIMAT0003510 mmu-miR-717 84092 Usp8 ucucUUCCAUAGAGACA-GACUc || ||| :| ||| |||| caccAAAGUAAUUGUGUACUGAu 2 19 774 796 [mm9:2:126558718-126558740:+] 0.5223 126 0 -9.63 -0.7927 MIMAT0003511 mmu-miR-450b-5p 84092 Usp8 auaaGUCCUUGUAUGAC-GUUUu ||| | :| |||| |||| uugaCAGCAUUA-ACUGUCAAAg 2 19 448 469 [mm9:2:126558392-126558413:+] 0.5008 120 0 -11.44 -0.4066 MIMAT0003781 mmu-miR-676* 84092 Usp8 cguucaggauuccaACAUCUCa ||||||| cgcugcagcugcuaUGUAGAGg 2 9 75 96 [mm9:2:126584417-126584438:+] 0.5303 140 7 -14.72 -0.3893 MIMAT0003781 mmu-miR-676* 84092 Usp8 cguucAGGAUUCCAACA-UCUCa |:|| || |||| |||| ugugaUUCU-AGUUUGUAAGAGu 2 18 561 582 [mm9:2:126558505-126558526:+] 0.5085 123 0 -13.17 -0.8668 MIMAT0004841 mmu-miR-871 84092 Usp8 guacugacCGUGAUUAGACUUAu |::| | ||||||| ccagcucaGUGC-ACUCUGAAUg 2 16 366 387 [mm9:2:126584708-126584729:+] 0.6100 145 7 -14.14 -0.1932 MIMAT0004846 mmu-miR-881 84092 Usp8 agauaAGUCU---UUUCUGUGUCAa ||||| :|||||||| gcacaUCAGACUGCUGGACACAGUu 2 18 444 468 [mm9:2:126584786-126584810:+] 0.6271 148 7 -19.78 -0.5336 MIMAT0004856 mmu-miR-105 84092 Usp8 ugGUGUUCGUAGACUCGUGA-ACc | | ||| || | ||||| || agCCCCAGC-UCAGUGCACUCUGa 2 22 362 384 [mm9:2:126584704-126584726:+] 0.6100 123 0 -16.38 -0.4979 MIMAT0004864 mmu-miR-297a* 84092 Usp8 auacCCAUAC--ACACAUACAUau | || | ||| |||||| cucaGAUAGGAAUGUAUAUGUAca 3 19 404 427 [mm9:2:126584746-126584769:+] 0.6412 133 0 -8.90 -0.1811 MIMAT0004866 mmu-miR-297c* 84092 Usp8 auacCCAUAC--ACACAUACAUau | || | ||| |||||| cucaGAUAGGAAUGUAUAUGUAca 3 19 404 427 [mm9:2:126584746-126584769:+] 0.6412 133 0 -8.90 -0.1811 MIMAT0004871 mmu-miR-465b-5p 84092 Usp8 gucuagUCGUGGUAAGAUUUau | | ::|||||||| cacuaaAUCUUUAUUCUAAAca 3 17 602 623 [mm9:2:126584944-126584965:+] 0.6002 136 0 -8.85 -0.3909 MIMAT0004871 mmu-miR-465b-5p 84092 Usp8 gucuagucgugguaaGAUUUAu |||||| ggcuguauuugugcaCUAAAUc 2 8 589 610 [mm9:2:126584931-126584952:+] 0.6632 120 6 -5.76 -0.1009 MIMAT0004873 mmu-miR-465c-5p 84092 Usp8 gucuagUCGCGGUAAGAUUUau | | ::|||||||| cacuaaAUCUUUAUUCUAAAca 3 17 602 623 [mm9:2:126584944-126584965:+] 0.6002 136 0 -8.19 -0.3909 MIMAT0004876 mmu-miR-466b-3p 84092 Usp8 agaaUACACACGCACAUACAUau || | :|| |||||| ucagAUAGGAAUGUAUAUGUAca 3 20 405 427 [mm9:2:126584747-126584769:+] 0.6412 131 0 -7.31 -0.1863 MIMAT0005453 mmu-miR-466b-3-3p 84092 Usp8 agaaUACACACGCACAUACAUaa || | :|| |||||| ucagAUAGGAAUGUAUAUGUAca 3 20 405 427 [mm9:2:126584747-126584769:+] 0.6412 131 0 -7.31 -0.1863 MIMAT0004878 mmu-miR-466c-3p 84092 Usp8 agaaUACACACGCACAUACAUau || | :|| |||||| ucagAUAGGAAUGUAUAUGUAca 3 20 405 427 [mm9:2:126584747-126584769:+] 0.6412 131 0 -7.31 -0.1863 MIMAT0004880 mmu-miR-466e-3p 84092 Usp8 agaaUACACACGCACAUACAUau || | :|| |||||| ucagAUAGGAAUGUAUAUGUAca 3 20 405 427 [mm9:2:126584747-126584769:+] 0.6412 131 0 -7.31 -0.1863 MIMAT0004883 mmu-miR-466g 84092 Usp8 acacacacguaCACAGACAUa ||||||||| ucuggcaagccGUGUCUGUAu 2 11 937 957 [mm9:2:126558881-126558901:+] 0.5062 150 7 -17.27 -0.2765 MIMAT0004887 mmu-miR-467d* 84092 Usp8 cacauccacacaCAUACAUAUa | ||||||| uagcucagauagGAAUGUAUAu 2 11 401 422 [mm9:2:126584743-126584764:+] 0.6412 142 7 -8.65 -0.8103 MIMAT0004898 mmu-miR-654-3p 84092 Usp8 uuccacuaccAGUC-GUCUGUAu |:|| ||||||| aaauaauucaUUAGUCAGACAUu 2 13 267 289 [mm9:2:126584609-126584631:+] 0.5789 147 7 -12.56 -1.2120 MIMAT0004931 mmu-miR-466d-3p 84092 Usp8 gaUACACACGCACAUACAUau || | :|| |||||| agAUAGGAAUGUAUAUGUAca 3 20 407 427 [mm9:2:126584749-126584769:+] 0.6412 131 0 -6.91 -0.1863 MIMAT0004938 mmu-miR-875-3p 84092 Usp8 guaucggagucauAAAAGUCc ||||||| agaaauuuuuucuUUUUCAGa 2 9 722 742 [mm9:2:126558666-126558686:+] 0.5129 140 7 -8.05 -1.2480 MIMAT0005830 mmu-miR-466l 84092 Usp8 uuAUACACACGUACAUAAAUAu ||| ||| || ||||||| ugUAUAUGUACA--UAUUUAUu 2 21 416 435 [mm9:2:126584758-126584777:+] 0.6342 161 7 -7.36 -0.7631 MIMAT0005839 mmu-miR-669f 84092 Usp8 uaugcacacacaCAUACAUAUAc | |||||||| uagcucagauagGAAUGUAUAUg 2 12 401 423 [mm9:2:126584743-126584765:+] 0.6412 147 7 -10.85 -0.8743 MIMAT0005847 mmu-miR-1190 84092 Usp8 cuGUCUCCCCUUGGAGUCGACu || | | ||| :||||||| uuCAUA-GUGAA-UUCAGCUGc 2 21 488 507 [mm9:2:126558432-126558451:+] 0.5004 152 7 -15.56 -0.8261 MIMAT0005854 mmu-miR-467g 84092 Usp8 uaUAUACACACACAUACAUau ||| | ||| |||||| agAUAGGAAUGUAUAUGUAca 3 20 407 427 [mm9:2:126584749-126584769:+] 0.6412 143 0 -6.91 -0.1863 MIMAT0007863 mmu-miR-1902 84092 Usp8 uuCAGUACGGAUGACGU-GGAGa ||| | | |:|||| |||| acGUC-UCCAAAUUGCAGCCUCa 2 21 26 47 [mm9:2:126584368-126584389:+] 0.5631 122 0 -16.13 -0.9660 MIMAT0007863 mmu-miR-1902 84092 Usp8 uucaGUACGGA-UGACGUGGAGa || ||| |: ||||||| ccaaCAGUCCUCAUAGCACCUCg 2 19 1096 1118 [mm9:2:126559040-126559062:+] 0.5008 153 7 -17.50 -0.3953 MIMAT0007868 mmu-miR-1903 84092 Usp8 acagaguccuucUUCUUCUUcc | |||||| auuaaaaucuuaAUGAAGAA-- 3 11 667 686 [mm9:2:126585009-126585028:+] 0.6033 122 0 -7.53 -0.1854 MIMAT0007868 mmu-miR-1903 84092 Usp8 acagaguccuucuuCUUCUUCc ||||||| ugcccuuaugccccGAAGAAGa 2 9 598 619 [mm9:2:126558542-126558563:+] 0.5085 140 7 -10.73 -0.4713 MIMAT0007868 mmu-miR-1903 84092 Usp8 acAGAGUCCUUCUUCUUC-UUCc || ||| |:| |||| ||| gaUCACAGCAGG--GAAGUAAGu 2 21 224 244 [mm9:2:126558168-126558188:+] 0.5006 121 0 -11.64 -0.1060 MIMAT0007871 mmu-miR-1892 84092 Usp8 uagGAGGGA---GGGCAGGGGUUUa ||:::| :|:| ||||||| caaCUUUUUGAGUCUG-CCCCAAAg 2 20 240 263 [mm9:2:126584582-126584605:+] 0.5789 144 7 -21.06 -0.8186 MIMAT0009391 mmu-miR-1928 84092 Usp8 cucgaccguUACAUCGa ||||||| cauaauuauAUGUAGCa 2 9 759 775 [mm9:2:126558703-126558719:+] 0.4948 140 7 -7.87 -1.0799 MIMAT0009392 mmu-miR-1929 84092 Usp8 gagacGAGAUAUUUCAGGAUCUu :|||:|:|| |||||| uagccUUCUGUGAAAGCCUAGAa 2 19 474 496 [mm9:2:126584816-126584838:+] 0.6140 138 6 -20.47 -0.1137 MIMAT0009392 mmu-miR-1929 84092 Usp8 gaGACGAGAUAUUU-CA-GGAUCUu :| ||| | |:| || |||||| agUUCCUC-ACAGACGUGCCUAGAa 2 22 391 414 [mm9:2:126558335-126558358:+] 0.5009 122 6 -14.54 -0.2264 MIMAT0009399 mmu-miR-1935 84092 Usp8 ucucuaggcggucggAGACGGa |||||| aaacaacuuuuugagUCUGCCc 2 8 237 258 [mm9:2:126584579-126584600:+] 0.5789 120 6 -13.07 -0.1016 MIMAT0009400 mmu-miR-1936 84092 Usp8 cgGUCAAGUGUCGUCCA-GUCAAu |:|||| ||| ||| ||||| caCGGUUC-CAG--GGUACAGUUg 2 22 204 224 [mm9:2:126558148-126558168:+] 0.5006 128 0 -23.02 -0.1440 MIMAT0009407 mmu-miR-1942 84092 Usp8 guuggucuacuucUGUAGAcu |||||| aaauaauucauuuACAUCUac 3 9 646 666 [mm9:2:126584988-126585008:+] 0.5703 120 0 -10.59 -0.4346 MIMAT0009419 mmu-miR-669m 84092 Usp8 uauacaaacacaCCUACAUAUa | ||||||| uagcucagauagGAAUGUAUAu 2 11 401 422 [mm9:2:126584743-126584764:+] 0.6412 142 7 -10.02 -0.8103 MIMAT0009421 mmu-miR-669o 84092 Usp8 uguauuuguacgugugUGUUGAu |||||| aacagccugacauuuaACAACUa 2 8 177 199 [mm9:2:126584519-126584541:+] 0.5789 120 6 -12.71 -0.1747 MIMAT0009421 mmu-miR-669o 84092 Usp8 uguauuuguacgugugUGUUGAu |||||| agucauuuauuucaaaACAACUu 2 8 223 245 [mm9:2:126584565-126584587:+] 0.5789 120 6 -10.54 -0.1351 MIMAT0009430 mmu-miR-1957 84092 Usp8 cagUAUACGA--GAUGGUGAc :|||| | :||||||| ugaGUAUGAUACUUACCACUc 2 17 142 162 [mm9:2:126558086-126558106:+] 0.5067 151 7 -14.55 -0.5737 MIMAT0009431 mmu-miR-1958 84092 Usp8 ugaaugacgaagGUGAAAGGAu :|||||||| uguaguguaaggUACUUUCCUc 2 11 825 846 [mm9:2:126558769-126558790:+] 0.5322 146 7 -13.49 -0.5411 MIMAT0009434 mmu-miR-1961 84092 Usp8 aaGAUUGAU--GAUGGAGu || || | ||||||| uaCUUACCACUCUACCUCa 2 16 151 169 [mm9:2:126558095-126558113:+] 0.5067 146 7 -16.55 -0.6987 MIMAT0009435 mmu-miR-1962 84092 Usp8 uaCACAGGGUCACGGUCGGAGa || ||| | | ||||||| acGUCUCCAAAUUGCAGCCUCa 2 21 26 47 [mm9:2:126584368-126584389:+] 0.5631 160 7 -19.66 -0.9486 MIMAT0009435 mmu-miR-1962 84092 Usp8 uacacAGGGUCACGGUCGGAGa || | | |||||||| ccuauUCACUGCUCCAGCCUCu 2 18 330 351 [mm9:2:126584672-126584693:+] 0.5789 153 7 -20.87 -0.6224 MIMAT0009435 mmu-miR-1962 84092 Usp8 uacacagggucacgGUCGGAga |||||| agaaagaaagaaaaCAGCCUga 3 9 165 186 [mm9:2:126584507-126584528:+] 0.5789 120 0 -9.75 -0.2807 MIMAT0009441 mmu-miR-1968 84092 Usp8 ucagguggUAGGAAUUGUCGACGu ||| | :||||||| gauaauggAUCGCU-GCAGCUGCu 2 17 65 87 [mm9:2:126584407-126584429:+] 0.5438 146 7 -15.44 -0.3504 MIMAT0009441 mmu-miR-1968 84092 Usp8 ucAGGUGGUAG-GAAUUGUC-GACGu | |||::|: | | ||| |||| auUGCACUGUUGCACAUCAGACUGCu 2 23 433 458 [mm9:2:126584775-126584800:+] 0.6342 121 0 -13.93 -0.3654 MIMAT0009441 mmu-miR-1968 84092 Usp8 ucaggUGGUAGGAAUUGUCGACGu |||| || |:||||||| agaugACCA--CUCAGCAGCUGCu 2 20 109 130 [mm9:2:126558053-126558074:+] 0.5067 160 7 -20.99 -0.2118 MIMAT0009441 mmu-miR-1968 84092 Usp8 ucagguGGUAGGAAUU--GUCGACGu :||| | || ||||||| aacaguUCAUAGUGAAUUCAGCUGCa 2 19 483 508 [mm9:2:126558427-126558452:+] 0.5004 149 7 -21.97 -1.1429 MIMAT0009442 mmu-miR-1969 84092 Usp8 ugGGUACAAUUUCAGAG-GUAGAa ||| ||: || ||| ||||| cuCCAAAUUGCAGCCUCACAUCUa 2 22 30 53 [mm9:2:126584372-126584395:+] 0.5631 133 0 -16.26 -0.8937 MIMAT0009456 mmu-miR-1839-5p 84092 Usp8 guuCUG-GACAAGAU-AGAUGGAa ||: || | | | ||||||| uauGAUACU-UACCACUCUACCUc 2 20 146 168 [mm9:2:126558090-126558112:+] 0.5067 143 7 -10.49 -0.2149 MIMAT0011217 mmu-miR-2141 84092 Usp8 uugaaaagacugUGGAGGa |||||| caaaccaucauaACCUCCa 2 8 307 325 [mm9:2:126584649-126584667:+] 0.5789 120 6 -10.51 -0.2038 MIMAT0012772 mmu-miR-599 84092 Usp8 caaACUAUUUGACUGU-GUu || ||::||||| || uacUGUGAAGUUGACAGCAu 2 17 438 457 [mm9:2:126558382-126558401:+] 0.5012 120 0 -9.72 -0.6018 MIMAT0012774 mmu-miR-664 84092 Usp8 auccgaccccucAUUUACUUau | |||||| uacauuaaaaucUUAAUGAAga 3 11 664 685 [mm9:2:126585006-126585027:+] 0.6033 122 0 -4.09 -0.3685 MIMAT0015640 mmu-miR-3470a 84092 Usp8 ggUCGGACCAGAUGUUUCAcu ||:||| | |||||| ugAGUCUG--CCCCAAAGUua 3 20 248 266 [mm9:2:126584590-126584608:+] 0.5789 132 0 -12.25 -0.1064 MIMAT0000121 mmu-let-7g 84092 Usp8 uuGACAUGUUUGAUGAUGGAGu || ||| ||| ||||||| uaCU-UAC-CACU-CUACCUCa 2 21 151 169 [mm9:2:126558095-126558113:+] 0.5067 150 7 -18.94 -0.6661 MIMAT0000122 mmu-let-7i 84092 Usp8 uugucguguuUGAUGAUGGAGu ||| ||||||| gauacuuaccACU-CUACCUCa 2 13 149 169 [mm9:2:126558093-126558113:+] 0.5067 146 7 -17.18 -0.6699 MIMAT0000123 mmu-miR-1 84092 Usp8 uauguaugaAGAAAUGUAAGGu ||| ||||||| aauuggaaaUCUAAACAUUCCa 2 14 1077 1098 [mm9:2:126559021-126559042:+] 0.5050 149 7 -13.39 -1.1321 MIMAT0000123 mmu-miR-1 84092 Usp8 uauguaugaagaaauGUAAGGu |||||| ccaaauugcauacccCAUUCCa 2 8 1045 1066 [mm9:2:126558989-126559010:+] 0.5092 120 6 -14.00 -0.1189 MIMAT0000125 mmu-miR-23b 84092 Usp8 ccauuagggaccGUUACACUa :||||||| guaucuaaaguuUAAUGUGAu 2 10 954 974 [mm9:2:126558898-126558918:+] 0.5055 141 7 -11.60 -0.7666 MIMAT0000126 mmu-miR-27b 84092 Usp8 cguCUUGAAUCGGUGACACUu || :|||| :||||||| gguGAUUUUAGAUACUGUGAa 2 19 426 446 [mm9:2:126558370-126558390:+] 0.5012 166 7 -19.91 -0.8855 MIMAT0000133 mmu-miR-101a 84092 Usp8 aaGUCAAUAGUGUC-AUGACAu |:|| ||: :|| |||||| uaCGGUGAUUUUAGAUACUGUg 2 20 423 444 [mm9:2:126558367-126558388:+] 0.5012 131 6 -17.42 -0.5131 MIMAT0000141 mmu-miR-130a 84092 Usp8 uacgGGAAAAUUGUAACGUGAc | | || :|||||||| uguaCAUAUU--UAUUGCACUg 2 19 422 441 [mm9:2:126584764-126584783:+] 0.6342 147 7 -15.42 -0.9857 MIMAT0000141 mmu-miR-130a 84092 Usp8 uacgggaaaauuguaACGUGAc |||||| uuccggcuguauuugUGCACUa 2 8 585 606 [mm9:2:126584927-126584948:+] 0.6632 120 6 -9.97 -0.4024 MIMAT0000142 mmu-miR-9 84092 Usp8 aguAUGUCGAUCUAUUGGUUUCu ||:| ||| ||||||| aauUAUAUGUAG--CACCAAAGu 2 21 762 782 [mm9:2:126558706-126558726:+] 0.4948 149 7 -15.81 -0.5862 MIMAT0000148 mmu-miR-136 84092 Usp8 gguAGU-AGUUUUGUUUACCUca |:| || ||||||||||| ucuUUAUUCUAAACAAAUGGAaa 3 20 609 631 [mm9:2:126584951-126584973:+] 0.6002 154 0 -14.44 -0.2948 MIMAT0000153 mmu-miR-141 84092 Usp8 gguAGAAAUGGUC--UGUCA-CAAu | ||| |:|| ||||| ||| uuuUGUUUUCUAGGUACAGUAGUUa 2 20 64 88 [mm9:2:126558008-126558032:+] 0.5088 126 0 -13.39 -0.6831 MIMAT0000156 mmu-miR-144 84092 Usp8 ucAUG-UAGUAGA---UAUGACAu ||| :| ||:| ||||||| ucUACGGUGAUUUUAGAUACUGUg 2 19 421 444 [mm9:2:126558365-126558388:+] 0.5012 148 7 -13.06 -0.3399 MIMAT0000162 mmu-miR-152 84092 Usp8 gguucaAGACAGUACGUGACu | | | ||||||| uguacaUAUUUAUUGCACUGu 2 16 422 442 [mm9:2:126584764-126584784:+] 0.6342 143 7 -10.84 -1.0871 MIMAT0000162 mmu-miR-152 84092 Usp8 gguucaagacAGUACGUGAcu |::|||||| ccggcuguauUUGUGCACUaa 3 12 587 607 [mm9:2:126584929-126584949:+] 0.6632 127 0 -14.85 -0.2107 MIMAT0000164 mmu-miR-154 84092 Usp8 gcuuccgUUGUGCCUAUUGGAu ||| ||||||| gguaccaAACCAUCAUAACCUc 2 16 302 323 [mm9:2:126584644-126584665:+] 0.5789 143 7 -9.78 -0.5079 MIMAT0000165 mmu-miR-155 84092 Usp8 ugggGAUAGUGUUAA---UCGUAAUu ||:| | |:|| ||||||| gauaCUGUGA-AGUUGACAGCAUUAa 2 20 436 460 [mm9:2:126558380-126558404:+] 0.5012 148 7 -12.13 -0.7993 MIMAT0000208 mmu-miR-10b 84092 Usp8 guguuuaagccaagaUGUCCCau |||||| uuucuuaaggaaaugACAGGGca 3 9 543 565 [mm9:2:126584885-126584907:+] 0.6010 120 0 -12.37 -0.1173 MIMAT0000210 mmu-miR-181a 84092 Usp8 ugaguggcugucgcaaCUUACAa |||||| gaccuagcucagauagGAAUGUa 2 8 397 419 [mm9:2:126584739-126584761:+] 0.6412 120 6 -13.60 -0.2207 MIMAT0000211 mmu-miR-182 84092 Usp8 gccacacucaAGAUGGUAACGGUUu |:|::: ||||||| cauaguuuugUUUGUUUUUGCCAAa 2 16 1025 1049 [mm9:2:126558969-126558993:+] 0.5092 151 7 -16.24 -1.1175 MIMAT0000215 mmu-miR-186 84092 Usp8 ucgggUUUUCCUCUUAAGAAAc :||| ||||:||| aaaugGAAACUUUAAUUUUUUa 2 18 623 644 [mm9:2:126584965-126584986:+] 0.5373 133 0 -3.64 -0.1558 MIMAT0000223 mmu-miR-193 84092 Usp8 ugacccugaaacaUCCGGUCAa |||||||| caccauauaauucAGGCCAGUg 2 10 127 148 [mm9:2:126584469-126584490:+] 0.5789 145 7 -14.01 -0.7696 MIMAT0000229 mmu-miR-199a-5p 84092 Usp8 cuUGUCCAUCA-GACUUGUGACCc | ||| | | | ||||||||| guAGAGGGAUUCCAGAACACUGGg 2 22 90 113 [mm9:2:126584432-126584455:+] 0.5303 164 7 -25.11 -0.1775 MIMAT0000238 mmu-miR-205 84092 Usp8 gucugaggccaccUUACUUCcu ||||||| acauuaaaaucuuAAUGAAGaa 3 10 665 686 [mm9:2:126585007-126585028:+] 0.6033 125 0 -7.00 -0.3447 MIMAT0000239 mmu-miR-206 84092 Usp8 ggugugugaAGGAAUGUAAGGu ||: ||||||| aauuggaaaUCUAAACAUUCCa 2 14 1077 1098 [mm9:2:126559021-126559042:+] 0.5050 145 7 -12.42 -1.1321 MIMAT0000239 mmu-miR-206 84092 Usp8 ggugugugaaggaauGUAAGGu |||||| ccaaauugcauacccCAUUCCa 2 8 1045 1066 [mm9:2:126558989-126559010:+] 0.5092 120 6 -15.08 -0.1189 MIMAT0000366 mmu-miR-290-5p 84092 Usp8 uuUC-ACGGGGGUA---UCAAACUCa || ||| | :|| | |||||| ucAGCUGCACAUAUUAAACUUUGAGa 2 21 500 525 [mm9:2:126558444-126558469:+] 0.5044 122 6 -10.96 -0.1716 MIMAT0000369 mmu-miR-292-5p 84092 Usp8 guuuucucgggggucAAACUCa |||||| cugcacauauuaaacUUUGAGa 2 8 504 525 [mm9:2:126558448-126558469:+] 0.5044 120 6 -5.77 -0.1716 MIMAT0000379 mmu-miR-301a 84092 Usp8 cgAAAC-UGUUAU-GAUAACGUGAc | || || ||| :||||||||| uaUAUGUAC-AUAUUUAUUGCACUg 2 22 418 441 [mm9:2:126584760-126584783:+] 0.6342 161 7 -20.36 -0.9917 MIMAT0000379 mmu-miR-301a 84092 Usp8 cgaaaCUGUUAUGAUAACGUGAc |:| :||:| |||||| cuuccGGCUGUAUUUGUGCACUa 2 19 584 606 [mm9:2:126584926-126584948:+] 0.6632 130 6 -13.61 -0.4024 MIMAT0000383 mmu-let-7d 84092 Usp8 uugAUACGUUGGAU-----GAUGGAGa |||| ||:|| ||||||| gagUAUGAUACUUACCACUCUACCUCa 2 20 143 169 [mm9:2:126558087-126558113:+] 0.5067 150 7 -17.39 -0.6987 MIMAT0000387 mmu-miR-130b 84092 Usp8 uacgggaaaguAGUAACGUGAc |:|||||||| uauguacauauUUAUUGCACUg 2 12 420 441 [mm9:2:126584762-126584783:+] 0.6342 151 7 -18.13 -0.9917 MIMAT0000387 mmu-miR-130b 84092 Usp8 uacgggaaaguaguaACGUGAc |||||| uuccggcuguauuugUGCACUa 2 8 585 606 [mm9:2:126584927-126584948:+] 0.6632 120 6 -11.96 -0.4024 MIMAT0000513 mmu-miR-19b 84092 Usp8 agucaaaacguaccuaAACGUGu |||||| cauauuuauugcacugUUGCACa 2 8 426 448 [mm9:2:126584768-126584790:+] 0.6342 120 6 -13.91 -0.1005 MIMAT0000516 mmu-miR-148a 84092 Usp8 uguuucaAGACAUCACGUGACu | | || ||||||| auguacaUAUUUAUUGCACUGu 2 16 421 442 [mm9:2:126584763-126584784:+] 0.6342 151 7 -12.05 -1.0871 MIMAT0000516 mmu-miR-148a 84092 Usp8 uguuucaaGACAU---CACGUGAcu ||||| ||||||| gcuuccggCUGUAUUUGUGCACUaa 3 15 583 607 [mm9:2:126584925-126584949:+] 0.6632 133 0 -15.30 -0.2107 MIMAT0000521 mmu-let-7a 84092 Usp8 uuGAUAUGUUGGAUGAUGGAGu || ||| ||: ||||||| uaCU-UACCACU--CUACCUCa 2 21 151 169 [mm9:2:126558095-126558113:+] 0.5067 151 7 -18.60 -0.6624 MIMAT0000522 mmu-let-7b 84092 Usp8 uugGUGUGUUG-GAUGAUGGAGu :|| :| | || ||||||| ugaUACUUACCACU-CUACCUCa 2 20 148 169 [mm9:2:126558092-126558113:+] 0.5067 148 7 -20.49 -0.6661 MIMAT0000523 mmu-let-7c 84092 Usp8 uugGUAUGUUGGAUGAUGGAGu | ||| ||: ||||||| auaCUUACCACU--CUACCUCa 2 20 150 169 [mm9:2:126558094-126558113:+] 0.5067 152 7 -19.62 -0.6624 MIMAT0000524 mmu-let-7e 84092 Usp8 uugaUAUG-UUGGAG-GAUGGAGu |||| ||| | ||||||| uaugAUACUUACCACUCUACCUCa 2 19 146 169 [mm9:2:126558090-126558113:+] 0.5067 156 7 -21.59 -0.6912 MIMAT0000525 mmu-let-7f 84092 Usp8 uuGAUAUGUUAGAUGAUGGAGu || ||| | || ||||||| uaCU-UACCA-CU-CUACCUCa 2 21 151 169 [mm9:2:126558095-126558113:+] 0.5067 150 7 -17.53 -0.6661 MIMAT0000531 mmu-miR-22 84092 Usp8 ugucaagaaguugaCCGUCGAa ||||||| aguaaggagcuugaGGCAGCUg 2 9 242 263 [mm9:2:126558186-126558207:+] 0.5006 140 7 -14.47 -0.1154 MIMAT0000532 mmu-miR-23a 84092 Usp8 ccuuuagggaccGUUACACUa :||||||| guaucuaaaguuUAAUGUGAu 2 10 954 974 [mm9:2:126558898-126558918:+] 0.5055 141 7 -11.60 -0.7666 MIMAT0000537 mmu-miR-27a 84092 Usp8 cgcCUUGAAUCGGUGACACUu || :|||| :||||||| gguGAUUUUAGAUACUGUGAa 2 19 426 446 [mm9:2:126558370-126558390:+] 0.5012 166 7 -20.96 -0.8855 MIMAT0000545 mmu-miR-98 84092 Usp8 uuguuAUGUUGAAUGAUGGAGu ||| ||| ||||||| auacuUACCACU--CUACCUCa 2 18 150 169 [mm9:2:126558094-126558113:+] 0.5067 154 7 -17.10 -0.6624 MIMAT0000580 mmu-miR-148b 84092 Usp8 uguuucaAGACACUACGUGACu | | | ||||||| auguacaUAUUUAUUGCACUGu 2 16 421 442 [mm9:2:126584763-126584784:+] 0.6342 143 7 -11.80 -1.0871 MIMAT0000580 mmu-miR-148b 84092 Usp8 uguuucaAGACACUACGUGAcu | | || |||||| ccggcugUAUUUG-UGCACUaa 3 16 587 607 [mm9:2:126584929-126584949:+] 0.6632 125 0 -12.08 -0.1961 MIMAT0000584 mmu-miR-339-5p 84092 Usp8 gcACUCGAGGA--CC--UCCUGUCCCu || :||:| || | ||||||| aaUGCUUUCUUAAGGAAAUGACAGGGc 2 22 538 564 [mm9:2:126584880-126584906:+] 0.6010 147 7 -19.58 -1.0990 MIMAT0004651 mmu-miR-340-5p 84092 Usp8 uuagucaGAGUAACGAAAUAuu || | | |||||| uugugcaCUAAAU-CUUUAUuc 3 16 597 617 [mm9:2:126584939-126584959:+] 0.6002 125 0 -4.60 -0.1876 MIMAT0000616 mmu-miR-101b 84092 Usp8 aaGUCGAUAGUGUC-AUGACAu |:|: ||: :|| |||||| uaCGGUGAUUUUAGAUACUGUg 2 20 423 444 [mm9:2:126558367-126558388:+] 0.5012 127 6 -16.63 -0.5201 MIMAT0000648 mmu-miR-10a 84092 Usp8 guguuuaagCCUAGA-UGUCCCau ||| | |||||| cuuucuuaaGGAAAUGACAGGGca 3 15 542 565 [mm9:2:126584884-126584907:+] 0.6010 125 0 -14.02 -0.1161 MIMAT0000651 mmu-miR-19a 84092 Usp8 agucaAAACGUAUCUA-AACGUGu | | |||| | |||||| guauaUGUACAUAUUUAUUGCACu 2 19 417 440 [mm9:2:126584759-126584782:+] 0.6342 122 6 -9.42 -0.8717 MIMAT0000651 mmu-miR-19a 84092 Usp8 agucaaaacguaucuaAACGUGu |||||| cauauuuauugcacugUUGCACa 2 8 426 448 [mm9:2:126584768-126584790:+] 0.6342 120 6 -13.91 -0.1005 MIMAT0000654 mmu-miR-32 84092 Usp8 acGUUGAAUCAU-UACACGUUAu |::|| ||| |||||| | ucCGGCU--GUAUUUGUGCACUa 2 21 586 606 [mm9:2:126584928-126584948:+] 0.6632 120 0 -13.32 -0.1568 MIMAT0000669 mmu-miR-221 84092 Usp8 cuUUGGGUCGUCU--GU-UACAUCGa ||:: | || | :| ||||||| uaAAUUAAACAUAAUUAUAUGUAGCa 2 22 750 775 [mm9:2:126558694-126558719:+] 0.4948 147 7 -9.30 -1.0774 MIMAT0000670 mmu-miR-222 84092 Usp8 uggGUCAUCGGUCUACAUCGa || || ::| ||||||| aaaCA-UAAUUAUAUGUAGCa 2 19 756 775 [mm9:2:126558700-126558719:+] 0.4948 152 7 -11.51 -1.0799 MIMAT0000671 mmu-miR-224 84092 Usp8 uuGCCUUGGUGAUCACU-GAAu || |:|:::|:|||| ||| cuCGAAGCUGUUGGUGAUCUUa 2 20 844 865 [mm9:2:126558788-126558809:+] 0.5322 131 0 -19.98 -0.5623 MIMAT0000673 mmu-miR-181b 84092 Usp8 ugGGUGGCUGUCGUUACUUACAa |:| | ||| | |||||| acCUAGC-UCAGAUAGGAAUGUa 2 22 398 419 [mm9:2:126584740-126584761:+] 0.6412 123 6 -17.24 -0.2207 MIMAT0000674 mmu-miR-181c 84092 Usp8 ugaguggcuguccaaCUUACAa |||||| accuagcucagauagGAAUGUa 2 8 398 419 [mm9:2:126584740-126584761:+] 0.6412 120 6 -14.73 -0.2227 MIMAT0000708 mmu-miR-363 84092 Usp8 auGUCUACCUAUGGCACGUUAa |:| || || ::||||| | ucCGGCUGUAU-UUGUGCACUa 2 21 586 606 [mm9:2:126584928-126584948:+] 0.6632 126 0 -10.84 -0.1539 MIMAT0000747 mmu-miR-382 84092 Usp8 gcuUAGGUGGUG-CUUGUUGAAg ||::|:: | |||||||| gucAUUUAUUUCAAAACAACUUu 2 20 224 246 [mm9:2:126584566-126584588:+] 0.5789 154 7 -11.80 -1.1712 MIMAT0000766 mmu-miR-335-5p 84092 Usp8 uguaaaAAGCAAUAACGAGAACu ||: ||| | |||||| cagacaUUUAUUA-UUCUCUUGg 2 18 282 303 [mm9:2:126584624-126584645:+] 0.5789 127 6 -15.63 -0.1220 MIMAT0001095 mmu-miR-370 84092 Usp8 ugGUCCAAGGUGGGGUCGUCCg ||| |: |:| ||||||| uaCAG--UUGAUCACAGCAGGg 2 21 217 236 [mm9:2:126558161-126558180:+] 0.5006 153 7 -19.51 -0.3486 MIMAT0003128 mmu-miR-485 84092 Usp8 cuUAAGUAGUGCCGGUCGGAGa ||||| ::| |||||||| cuAUUCACUGC-UCCAGCCUCu 2 21 331 351 [mm9:2:126584673-126584693:+] 0.5789 162 7 -23.76 -0.6298 MIMAT0003128 mmu-miR-485 84092 Usp8 cuuaaguagugccgGUCGGAGa ||||||| acgucuccaaauugCAGCCUCa 2 9 26 47 [mm9:2:126584368-126584389:+] 0.5631 140 7 -15.49 -0.9549 MIMAT0003128 mmu-miR-485 84092 Usp8 cuuaaguagugccgGUCGGAga |||||| agaaagaaagaaaaCAGCCUga 3 9 165 186 [mm9:2:126584507-126584528:+] 0.5789 120 0 -9.60 -0.2783 MIMAT0004186 mmu-miR-301b 84092 Usp8 cgAAAC-UGUUAU-GGUAACGUGAc | || || ||| ::|||||||| uaUAUGUAC-AUAUUUAUUGCACUg 2 22 418 441 [mm9:2:126584760-126584783:+] 0.6342 157 7 -19.88 -0.9917 MIMAT0004186 mmu-miR-301b 84092 Usp8 cgaaaCUGUUAUGGUAACGUGAc |:| :||:: |||||| cuuccGGCUGUAUUUGUGCACUa 2 19 584 606 [mm9:2:126584926-126584948:+] 0.6632 126 6 -12.85 -0.4024 MIMAT0003456 mmu-miR-495 84092 Usp8 uucuucacgugguACAAACAAa |||||||| agcaacauaguuuUGUUUGUUu 2 10 1020 1041 [mm9:2:126558964-126558985:+] 0.5092 145 7 -10.86 -0.9493 MIMAT0003513 mmu-miR-505 84092 Usp8 ucuuUUGGUC-GUUCA-CAACUGc ||: || :|:|| |||||| uaccAAUAAGAUAGGUAGUUGACu 2 19 687 710 [mm9:2:126558631-126558654:+] 0.5310 125 6 -13.22 -0.6553 MIMAT0003515 mmu-miR-721 84092 Usp8 aagggGGAAAAUUAACGUGAc | | || |||||||| auguaCAUAUUUAUUGCACUg 2 17 421 441 [mm9:2:126584763-126584783:+] 0.6342 156 7 -13.79 -0.9917 MIMAT0003515 mmu-miR-721 84092 Usp8 aagggggaaaauuaACGUGAc |||||| uccggcuguauuugUGCACUa 2 8 586 606 [mm9:2:126584928-126584948:+] 0.6632 120 6 -11.72 -0.4024 MIMAT0004324 mmu-miR-181d 84092 Usp8 uggguggcuguuguuaCUUACAa |||||| gaccuagcucagauagGAAUGUa 2 8 397 419 [mm9:2:126584739-126584761:+] 0.6412 120 6 -16.24 -0.2227 MIMAT0004853 mmu-miR-874 84092 Usp8 agccagggagccCGGUCCCGUc | ||||||| ucuuaaggaaauGACAGGGCAa 2 11 545 566 [mm9:2:126584887-126584908:+] 0.6010 142 7 -18.37 -1.0024 MIMAT0004859 mmu-miR-193b 84092 Usp8 ucgcccugaaacacCCGGUCAa ||||||| caccauauaauucaGGCCAGUg 2 9 127 148 [mm9:2:126584469-126584490:+] 0.5789 140 7 -12.54 -0.7696 MIMAT0004896 mmu-miR-590-3p 84092 Usp8 ugAUCGAAUAUGU-AUUUUAau || | | |||| |||||| uuUA-CAUCUACAUUAAAAUcu 3 20 656 676 [mm9:2:126584998-126585018:+] 0.6033 136 0 -3.40 -0.2852 MIMAT0004896 mmu-miR-590-3p 84092 Usp8 ugAUCGAAUAUGUAUUUUAau |: | | | |||||| ucUGCCCCAAAGUUAAAAUaa 3 20 252 272 [mm9:2:126584594-126584614:+] 0.5789 123 0 -3.46 -0.1288 MIMAT0005850 mmu-miR-1192 84092 Usp8 uuaaaccagacAAACAAACAAa |||||||||| agcaacauaguUUUGUUUGUUu 2 12 1020 1041 [mm9:2:126558964-126558985:+] 0.5092 155 7 -11.46 -0.9366

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G021624 Usp8 Mus musculus 84092

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Usp8 mmu-miR-501-5p beg:486 end:503 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& .||.|| |||||||| &5' ----GCCTAG----AAAGGATT 3' Usp8 mmu-miR-669m beg:409 end:423 pic:3' TATACAAACACACC-TACATATA 5'& || |||||||| &5' ------------GGAATGTATAT 3' Usp8 mmu-miR-19astar beg:554 end:572 pic:3' CATCACGTTGATACGTTTTGAT 5'& .|| ||||||||| &5' -------GACAGGGCAAAACTA 3' Usp8 mmu-miR-759 beg:372 end:384 pic:3' CAGTTTTAACAAACGTGAGACG 5'& ||||||||| &5' ------------TGCACTCTG- 3' Usp8 mmu-miR-654-3p beg:274 end:289 pic:3' TTCCACTACCAGTC-GTCTGTAT 5'& |.|| ||||||| &5' ----------TTAGTCAGACAT- 3' Usp8 mmu-miR-1962 beg:28 end:47 pic:3' TACACAGGGTC-ACGGTCGGAGA 5'& ||| || ||||||| &5' -----TCCAAATTG-CAGCCTC- 3' Usp8 mmu-miR-485 beg:37 end:47 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& ||||||| &5' --------------CAGCCTC- 3' Usp8 mmu-miR-1892 beg:249 end:263 pic:3' TAGGAGGGAGGGCAGGGGTTTA 5'& .|.| ||||||| &5' ---------TCTG-CCCCAAA- 3' Usp8 mmu-miR-666-3p beg:69 end:85 pic:3' TCGTCCGCTAGTGCGACGTCGG 5'& |||| ||||||||. &5' -------GATC--GCTGCAGCT 3' Usp8 mmu-miR-193 beg:137 end:148 pic:3' TGACCCTGAAACATCCGGTCAA 5'& |||||||| &5' -------------AGGCCAGT- 3' Usp8 mmu-miR-193b beg:138 end:148 pic:3' TCGCCCTGAAACACCCGGTCAA 5'& ||||||| &5' --------------GGCCAGT- 3' Usp8 mmu-miR-671-5p beg:571 end:589 pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& . || . ||||||| &5' ------TTTCTGTT-GGCTTCC- 3' Usp8 mmu-miR-547 beg:291 end:310 pic:3' GAGTGAGTTTCTACATGGTTC 5'& |.|.|| ||||||| &5' -TTATTCTCTTG-GTACCAA- 3' Usp8 mcmv-miR-m59-1 beg:433 end:445 pic:3' GACTGCCAGCTCCGTGACGATT 5'& ||||||.|. &5' ------------GCACTGTTG- 3' Usp8 mmu-let-7astar beg:404 end:422 pic:3' CCTTTCTGTCATCTAACATATC 5'& |||.|| || |||||| &5' ----AGATAG--GAATGTATA- 3' Usp8 mmu-let-7b beg:38 end:63 pic:3' TTGGTGTGTTGGATGATGGA-GT 5'& |.|| ||| |.||| |.|.| || &5' AGCCTCAC-ATCTAATGCTTACA 3' Usp8 mmu-let-7bstar beg:403 end:422 pic:3' CCCTTCCGTC-ATCCA-ACATATC 5'& ||| |||| |||||| &5' -------CAGATAGGAATGTATA- 3' Usp8 mmu-let-7c beg:306 end:333 pic:3' TTGGTA-TGTTGGA--TGAT-GGAGT 5'& |||||| |.||||| |.| ||| &5' AACCATCATAACCTCCATTTTCCT-- 3' Usp8 mmu-let-7c-2star beg:404 end:422 pic:3' CCTTTCTGTCATCTAACATATC 5'& |||.|| || |||||| &5' ----AGATAG--GAATGTATA- 3' Usp8 mmu-miR-101b beg:135 end:153 pic:3' AAGTCGATAGTGTCATGACAT 5'& ||||| | ||||.|||| &5' TTCAGG---C-CAGTGCTGT- 3' Usp8 mmu-miR-1 beg:198 end:216 pic:3' TATGTATGAAGAAATGTAAGGT 5'& |||| | | .|||||| &5' ---CATAGTAC---GCATTCC- 3' Usp8 mmu-miR-124star beg:368 end:389 pic:3' TAGTTCCAGGCGACACTTGTGC 5'& ||| || | || ||||..| &5' -TCA--GTGCACTCTGAATGC- 3' Usp8 mmu-miR-130a beg:419 end:442 pic:3' TACGGGAAAATTGTAACGTGAC 5'& |||. .||||||||| &5' ATGTACATATT-TATTGCACTG 3' Usp8 mmu-miR-130b beg:419 end:442 pic:3' TACGGGAAAGTAGTAACGTGAC 5'& |||. |.||||||||| &5' ATGTACATAT-TTATTGCACTG 3' Usp8 mmu-miR-139-3p beg:14 end:35 pic:3' GAGGTTGTCCCGG----C-GCAGAGGT 5'& |||. | |||||||| &5' ---------GGCTTATTGACGTCTCCA 3' Usp8 mmu-miR-145 beg:91 end:114 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& ||||||||| ||| |||||. &5' AGGGATTCCA--GAACACTGGG- 3' Usp8 mmu-miR-150star beg:106 end:123 pic:3' GATAGGGGGTCCGGACATGGTC 5'& | || ||||.|.| &5' -------CTGGGGCTGTGCTA- 3' Usp8 mmu-miR-154 beg:380 end:403 pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& ||| || | ||.||||| &5' -GAATGCTCTA-GAATGACCTA 3' Usp8 mmu-miR-15a beg:136 end:154 pic:3' GTGTTTGGTAATACACGACGAT 5'& ||..||| ||||||.| &5' --CAGGCCA----GTGCTGTT- 3' Usp8 mmu-miR-15b beg:67 end:89 pic:3' ACATTTGGT-ACTACACGACGAT 5'& |..|.|. || ||||||| &5' --TGGATCGCTGCA--GCTGCTA 3' Usp8 mmu-miR-15b beg:137 end:154 pic:3' ACATTTGGTACTACACGACGAT 5'& |..||| ||||||.| &5' ---AGGCCA----GTGCTGTT- 3' Usp8 mmu-miR-16 beg:139 end:154 pic:3' GCGGTTATAAATGCACGACGAT 5'& |||| ||||||.| &5' -GCCA--------GTGCTGTT- 3' Usp8 mmu-miR-17star beg:63 end:83 pic:3' GATGTTCACGGGAGTGACGTCA 5'& |.|| || ||.|||||| &5' --ATAA-TGGA-TCGCTGCAG- 3' Usp8 mmu-miR-183 beg:132 end:153 pic:3' TCACTTAAGA-TGGTCACGGTAT 5'& ||||| .|||||||..| &5' ----AATTCAGGCCAGTGCTGT- 3' Usp8 mmu-miR-186star beg:543 end:565 pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& |..||..|| | || ||||| &5' CTTAAGGAAATGAC---AGGGC 3' Usp8 mmu-miR-1929 beg:476 end:496 pic:3' GAGACGAGATATTTCAGGATCTT 5'& .|||.|.|| ||||||| &5' -----TTCTGTGAAAGCCTAGAA 3' Usp8 mmu-miR-195 beg:64 end:89 pic:3' CGGTTATAAA--GACA-CGACGAT 5'& .|||. ||| ||||||| &5' --TAATGGATCGCTGCAGCTGCTA 3' Usp8 mmu-miR-1955 beg:99 end:117 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& ||| | |||||.|| &5' --------CAGA--ACACTGGGGCT 3' Usp8 mmu-miR-1962 beg:331 end:352 pic:3' TACACAGGGTCACG--GTCGGAGA 5'& ..|| ||| |||||||| &5' ------TTCACTGCTCCAGCCTCT 3' Usp8 mmu-miR-1968 beg:517 end:539 pic:3' TCAGGTGGT-AGGAATTGTCGACGT 5'& .|| |.|| ..||||||| &5' -----GCCTCTTCTAGGTAGCTGCA 3' Usp8 mmu-miR-1969 beg:308 end:330 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |||| ||||||.|| &5' --CCATCATAAC--CTCCATTTT 3' Usp8 mmu-miR-1971 beg:331 end:350 pic:3' AGAGT--CG-GGTCGGAAATG 5'& .||| || ||||||| &5' -TTCACTGCTCCAGCCT---- 3' Usp8 mmu-miR-199a-3p beg:447 end:460 pic:3' ATTGGTTACACGTCTGATGACA 5'& ||||||.||| &5' -----------CAGACTGCTG- 3' Usp8 mmu-miR-199a-5p beg:91 end:114 pic:3' CTTGTCCATCAGA-CTTGTGACCC 5'& ||| || |||||||||| &5' ----AGGGATTCCAGAACACTGGG 3' Usp8 mmu-miR-199bstar beg:91 end:114 pic:3' CTTGTCCATCAGA-TTTGTGACCC 5'& ||| || .||||||||| &5' ----AGGGATTCCAGAACACTGGG 3' Usp8 mmu-miR-19a beg:431 end:449 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& ||||| ||||||| &5' ------TTGCACTG--TTGCACA 3' Usp8 mmu-miR-19b beg:431 end:449 pic:3' AGTCAAAACGTACCTAAACGTGT 5'& ||||| ||||||| &5' ------TTGCACTG--TTGCACA 3' Usp8 mmu-miR-203 beg:217 end:237 pic:3' GATCACCAGGATTTGTAAAGTG 5'& || ||| .|||||| &5' --AGGAGTCATT--TATTTCA- 3' Usp8 mmu-miR-20bstar beg:61 end:83 pic:3' GATCTTCACGAGTGTGACGTCA 5'& ||| |.|||||| &5' --AGATAATGGATCGCTGCAG- 3' Usp8 mmu-miR-2141 beg:238 end:260 pic:3' TTGAAAAGA-CTG-TGGAGGA 5'& |||||||. | | .|| || &5' AACTTTTTGAGTCTGCC-CC- 3' Usp8 mmu-miR-2141 beg:568 end:589 pic:3' TTGAAAAGACTG-TGGAGGA 5'& |.||||||| .|.||| &5' -ATTTTTCTGTTGGCTTCC- 3' Usp8 mmu-miR-21star beg:136 end:154 pic:3' CTGTCGGGTAGCTGACGACAAC 5'& ||| ||| ||||||| &5' --CAGGCCAG----TGCTGTT- 3' Usp8 mmu-miR-24-2star beg:512 end:533 pic:3' TGACAAAGTC-GAGTC-ATCCGTG 5'& ||| | ||| ||||.| &5' ----TTTTGGCCTCTTCTAGGTA- 3' Usp8 mmu-miR-27a beg:467 end:488 pic:3' CGCCTTGAATCGGT-GACACTT 5'& ||| ||||| ||||||| &5' ----AACATAGCCTTCTGTGAA 3' Usp8 mmu-miR-291b-3p beg:57 end:79 pic:3' TGTTTGTTTTACCTACGTGAAA 5'& ||||| | ||||||| |.|| &5' ACAAAGATAATGGAT-CGCT-- 3' Usp8 mmu-miR-291b-3p beg:615 end:636 pic:3' TGTTTGTTTTACCTACGTGAAA 5'& .|||| ||||||| ||||| &5' -TAAAC-AAATGGAA--ACTTT 3' Usp8 mmu-miR-293 beg:441 end:465 pic:3' TGTGATGTTTGA-GACGCCGTGA 5'& .||| ||.||| ||| | ||| &5' GCACATCAGACTGCTG-GACAC- 3' Usp8 mmu-miR-297c beg:412 end:435 pic:3' TGTACATGTACGTGTGTATGTA 5'& |||||.|||.|||.|| .|| &5' --ATGTATATGTACATATTTAT 3' Usp8 mmu-miR-29astar beg:146 end:171 pic:3' GACTTGTGGTTTTCTTTAG-TCA 5'& ||| .|.||||||||| || &5' CTGTTTATCAAAAGAAAGAAAG- 3' Usp8 mmu-miR-29bstar beg:124 end:148 pic:3' ATTTGGTGGTATAC----TTTGGTCG 5'& |||||||| |..||||. &5' -----CACCATATAATTCAGGCCAGT 3' Usp8 mmu-miR-301a beg:420 end:442 pic:3' CGAAAC-TGTTATGATAACGTGAC 5'& || ||| .|||||||||| &5' ----TGTACATATTTATTGCACTG 3' Usp8 mmu-miR-301b beg:419 end:442 pic:3' CGAAAC-TGTTATGGTAACGTGAC 5'& || ||| ..||||||||| &5' ----TGTACATATTTATTGCACTG 3' Usp8 mmu-miR-33 beg:360 end:380 pic:3' ACGTTACGTTGATGTTACGTG 5'& || ||.|| ||.||||| &5' -GCCC--CAGCT-CAGTGCAC 3' Usp8 mmu-miR-338-3p beg:441 end:462 pic:3' GTTGTTTTAGTGACT-ACGACCT 5'& .|| |||| || ||||||| &5' --GCAC-ATCA--GACTGCTGGA 3' Usp8 mmu-miR-339-5p beg:543 end:564 pic:3' GCACTCGAGGACCTC--CTGTCCCT 5'& ||. ||| ||||||| &5' ------CTTAAGGAAATGACAGGG- 3' Usp8 mmu-miR-3475 beg:374 end:395 pic:3' AAGTTTGGTACACGGAGGTCT 5'& || |.. || |||.||| &5' --CACTCTGAATG-CTCTAGA 3' Usp8 mmu-miR-34a beg:328 end:343 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||| ||||||. &5' --------CTATT-CACTGCT- 3' Usp8 mmu-miR-34b-5p beg:321 end:343 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& || |. ||| ||||||. &5' -CATTTTCCTATT--CACTGCT- 3' Usp8 mmu-miR-34c beg:321 end:343 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& || |. ||| ||||||. &5' -CATTTTCCTATT--CACTGCT- 3' Usp8 mmu-miR-421 beg:566 end:583 pic:3' CGCGGGTTAATTACAGACAACTA 5'& |.| || |||||||. &5' ----CTATTTT---TCTGTTGG- 3' Usp8 mmu-miR-449a beg:321 end:343 pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||| .| | ||||||. &5' -CCATTTTCCTATTCACTGCT- 3' Usp8 mmu-miR-449c beg:432 end:444 pic:3' GGTCGATCGTTACGTGACGGA 5'& |||||||.. &5' -----------TGCACTGTT- 3' Usp8 mmu-miR-450a-3p beg:15 end:36 pic:3' TACTTACGTTT--C-GTAGGGGTTA 5'& || | |.||.|||| &5' ------GCTTATTGACGTCTCCAA- 3' Usp8 mmu-miR-450a-3p beg:246 end:262 pic:3' TACTTACGTTTCGTA-GGGGTTA 5'& .||. |||||| &5' ---------GAGTCTGCCCCAA- 3' Usp8 mmu-miR-466a-5p beg:412 end:435 pic:3' ATACATGTACATGTGTGTGTAT 5'& |||||.|||||||.|. .|| &5' -ATGTATATGTACATATTTAT- 3' Usp8 mmu-miR-466b-5p beg:412 end:436 pic:3' GTACATGTACATGTGTGTGTAG 5'& |||||.|||||||.|. .||. &5' -ATGTATATGTACATATTTATT 3' Usp8 mmu-miR-466e-5p beg:412 end:436 pic:3' ATACATGTACATGTGTGTGTAG 5'& |||||.|||||||.|. .||. &5' -ATGTATATGTACATATTTATT 3' Usp8 mmu-miR-466l beg:587 end:602 pic:3' TTATACACACGTACATAAATAT 5'& || |||||||.|. &5' ---------GC-TGTATTTGTG 3' Usp8 mmu-miR-467e beg:175 end:193 pic:3' TGTATATGTACGAGTGTGAATA 5'& ||| || |||.||| &5' ------ACAGCCTGACATTTA- 3' Usp8 mmu-miR-484 beg:171 end:187 pic:3' TAGCCCTCCCCTGAC-TCGGACT 5'& || ||||||| &5' ----------GAAAACAGCCTGA 3' Usp8 mmu-miR-485 beg:330 end:352 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& ||||| .| ||||||||| &5' --ATTCACTGCT-CCAGCCTCT 3' Usp8 mmu-miR-486 beg:206 end:224 pic:3' GAGCCCCGTCGAGTCATGTCCT 5'& ||| .|| ||||||| &5' ------GCA-TTCCTTACAGGA 3' Usp8 mmu-miR-496 beg:45 end:61 pic:3' CTCTAACCGGTACATTATGAGT 5'& ||| ||||.||.| &5' ---------CATCTAATGCTTA 3' Usp8 mmu-miR-497 beg:136 end:154 pic:3' ATGTTTGGTGTCACACGACGAC 5'& ||..||| ||||||.| &5' --CAGGCCA----GTGCTGTT- 3' Usp8 mmu-miR-592 beg:445 end:468 pic:3' TGTAGTA--GCGTATAACTGTGTTA 5'& |||||| .|| ||||||.| &5' ACATCAGACTGCTG---GACACAGT 3' Usp8 mmu-miR-669g beg:522 end:543 pic:3' TAGTA-CAGTTGTGTATGTTACGT 5'& || || .| |.|||||| &5' -TCTAGGTA---GC-TGCAATGC- 3' Usp8 mmu-miR-669i beg:413 end:426 pic:3' CATACGTACACACATATACGT 5'& ||||||||.| &5' -----------TGTATATGTA 3' Usp8 mmu-miR-671-5p beg:338 end:362 pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& ||||||||.||.| .|||. &5' CTCCAGCCTCTTCTCA-TTTCT- 3' Usp8 mmu-miR-671-5p beg:356 end:383 pic:3' GAGGTCGGGGA--GGTCCCGA-AGGA 5'& ||.|||||| .||| || ||. &5' -TCTAGCCCCAGCTCAGTGCACTCT- 3' Usp8 mmu-miR-672 beg:329 end:351 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& .|. ||| |.| |||.|||| &5' -TATTCAC--TGCTCCAGCCTC- 3' Usp8 mmu-miR-673-5p beg:469 end:487 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || .|| |||||| &5' ---CATA-GCCTT--CTGTGA- 3' Usp8 mmu-miR-674 beg:357 end:378 pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& |.| |||| |||||||| &5' ----CTAGCCCCAGCTCAGTGC 3' Usp8 mmu-miR-676star beg:76 end:96 pic:3' CGTTCAGGATTCCAACATCTCA 5'& |||. | ||| ||||||| &5' GCAGCTGCTA----TGTAGAG- 3' Usp8 mmu-miR-693-3p beg:34 end:59 pic:3' AATGTCGG--TGTAGACTTTCGACG 5'& ||.||||| |||||| || ||| &5' TTGCAGCCTCACATCT-AATGCT-- 3' Usp8 mmu-miR-713 beg:360 end:379 pic:3' CGACACACGGA----AGTCACGT 5'& ||| |||||||| &5' -------GCCCCAGCTCAGTGCA 3' Usp8 mmu-miR-721 beg:423 end:442 pic:3' AAGGGGGAAAATTAACGTGAC 5'& | ||||||||| &5' -----CATATTTATTGCACTG 3' Usp8 mmu-miR-871 beg:371 end:388 pic:3' GTACTGAC-CGTGATTAGACTTAT 5'& | |||| |||||||. &5' -------GTGCAC---TCTGAATG 3' Usp8 mmu-miR-878-5p beg:513 end:533 pic:3' ACAGAACTGTAGGTTGATCTAT 5'& |.|||.| ||. ||||.|| &5' --TTTTGGCCTCTT-CTAGGTA 3' Usp8 mmu-miR-881 beg:446 end:469 pic:3' AGATAAGTCTTT---TCTGTGTCAA 5'& ||||| .||||||||| &5' -----TCAGACTGCTGGACACAGTT 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Usp8; Kiaa0055; Ubpy mmu-let-7b 308 347 -UUGGU-GUGUUGGA--------------UGAUGGAGU- ||||| ||:||||| |||:|: || AAACCAUCAUAACCUCCAUUUUCCUAUUCACUGCUCCAG Usp8; Kiaa0055; Ubpy mmu-let-7c 308 347 -UUGGUA-UGUUGGA--------------UGAUGGAGU- |||||| |:||||| |||:|: || AAACCAUCAUAACCUCCAUUUUCCUAUUCACUGCUCCAG Usp8; Kiaa0055; Ubpy mmu-let-7e 336 358 -UGAUAU-GUUGGAGGAUGGAGU- |||: ||:||||: :|||| CACUGCUCCAGCCUCU--UCUCAU Usp8; Kiaa0055; Ubpy mmu-let-7g 10 49 -UGACA--UG--------------UUUGAUGAUGGAGU- :|||| :| |||:|:| :||||| GGCUGUCGGCUUAUUGACGUCUCCAAAUUGCAGCCUCAC Usp8; Kiaa0055; Ubpy mmu-let-7i 15 49 UGUCGU------------GUUUGAUGAUGGAGU- |:|| ||||:|:| :||||| UCGGCUUAUUGACGUCUCCAAAUUGCAGCCUCAC Usp8; Kiaa0055; Ubpy mmu-miR-101a 136 154 GAAGUCAAUAGUGUCAUGACAU ||||| | ||||:|||| AUUCAGG---C-CAGUGCUGUU Usp8; Kiaa0055; Ubpy mmu-miR-106a 433 449 AUGGACGUGACAAUCGUGAAAC :||||||||| |||| --AUUGCACUGUU-GCACA--- Usp8; Kiaa0055; Ubpy mmu-miR-106b 433 449 UAGACGUGACAGUCGUGAAAU :||||||||: |||| -AUUGCACUGUU-GCACA--- Usp8; Kiaa0055; Ubpy mmu-miR-122a 192 217 -UGUUUGUGGUAACA-GUGUGAGGU |||| :|:||| || |:||:||| AACAACUAUCAUAGUACGCAUUCCU Usp8; Kiaa0055; Ubpy mmu-miR-126-3p 289 308 CGUAAUAAUGAGUGCCAUGCU :|||||| ||| ||||| UUAUUAUU-CUCUUGGUACC- Usp8; Kiaa0055; Ubpy mmu-miR-128a 91 121 UUUUCUCU----------GGCCAAGUGACACU |:||:|| |:|| :||||| UAGAGGGAUUCCAGAACACUGGG--GCUGUGC Usp8; Kiaa0055; Ubpy mmu-miR-128b 91 121 CUUUCUCU----------GGCCAAGUGACACU |:||:|| |:|| :||||| UAGAGGGAUUCCAGAACACUGGG--GCUGUGC Usp8; Kiaa0055; Ubpy mmu-miR-130a 362 382 UACGGGAAAAUUGUAACGUGAC |||| || |||||| -AGCCCCAGCU-CAGUGCACUC Usp8; Kiaa0055; Ubpy mmu-miR-130b 362 382 UACGGGAAAGUAGUAACGUGAC |||| | ||| |||||| -AGCCCCAGC-UCAGUGCACUC Usp8; Kiaa0055; Ubpy mmu-miR-133a 78 106 -UGUCGACCA-ACUUC-CCCU--GGUU- :|||||| || || |||| |||: UGCAGCUGCUAUGUAGAGGGAUUCCAGA Usp8; Kiaa0055; Ubpy mmu-miR-133b 80 106 AUCGACCA-ACUUC-CCCU--GGUU- ||||| || || |||| |||: CAGCUGCUAUGUAGAGGGAUUCCAGA Usp8; Kiaa0055; Ubpy mmu-miR-136 608 631 -AGGUAGUAGUUUUGUUUACCUCA ||: || ||||||||||| AUCUUUAUUCUAAACAAAUGGAA- Usp8; Kiaa0055; Ubpy mmu-miR-138 332 349 CUAAGUGUUGUGGUCGA |||||| :| ||||| UAUUCACUGCUCCAGCC Usp8; Kiaa0055; Ubpy mmu-miR-141 128 150 -GGUAGAAAUGGUCU-GUCACAAU |||| :|||: ||||| ACCAUAUAAUUCAGGCCAGUGC-- Usp8; Kiaa0055; Ubpy mmu-miR-145 92 115 -UUCCCUAAGGACCCUUUUGACCUG :||||||||| ||| |||||: AGAGGGAUUCCA--GAACACUGGGG Usp8; Kiaa0055; Ubpy mmu-miR-148a 582 607 -UGUUUCAAGACAU---CACGUGACU :| ||||| ||||||| GGCUUCCGGCUGUAUUUGUGCACUA- Usp8; Kiaa0055; Ubpy mmu-miR-152 585 607 -GGGUUCAAGACAG---UACGUGACU :||: |||| :|||||| UUCCGG---CUGUAUUUGUGCACUA- Usp8; Kiaa0055; Ubpy mmu-miR-153 71 95 -CUAGUGAAAACACUGAUACGUU- ||||:|| :|||||:|: GGAUCGCUGCAGCUGCUAUGUAGA Usp8; Kiaa0055; Ubpy mmu-miR-15a 138 155 GUGUUUGGUAAUACACGACGAU ||::||| ||||||:| -UCAGGCCA----GUGCUGUUU Usp8; Kiaa0055; Ubpy mmu-miR-15b 139 155 ACAUUUGGUACUACACGACGAU |::||| ||||||:| --CAGGCCA----GUGCUGUUU Usp8; Kiaa0055; Ubpy mmu-miR-17-3p 46 84 AUGUUC---ACGGG--------------AGUGACGUCA ||| |||:: ||:|||||| CACAUCUAAUGCUUACAAAGAUAAUGGAUCGCUGCAGC Usp8; Kiaa0055; Ubpy mmu-miR-17-5p 433 449 UGAUGGACGUGACAUUCGUGAAAC :|||||||| |||| ----AUUGCACUGUU-GCACA--- Usp8; Kiaa0055; Ubpy mmu-miR-18 114 132 AUAGACGUGAUCUACGUGGAAU |||::||| ||||| --GCUGUGCUACUAGCACCA-- Usp8; Kiaa0055; Ubpy mmu-miR-183 134 154 GUCACUUAAGA-UGGUCACGGUAU ||||| :|||||||::| ----UAAUUCAGGCCAGUGCUGUU Usp8; Kiaa0055; Ubpy mmu-miR-186 486 512 -UUCGGGUUUU-CCUCUU-AAGAAAC |||||:|:|| ||| |||||| AAAGCCUAGAAAGGAUUUUUUCUUUU Usp8; Kiaa0055; Ubpy mmu-miR-188 78 101 -UGGGAGGUGGUACGU-UCCCUAC :| |::|:|||:| |||||| UGCAG-CUGCUAUGUAGAGGGAUU Usp8; Kiaa0055; Ubpy mmu-miR-191 80 104 -UCGACGAAAA----CCCUAAGGCAAC ||||||| |||||||| CAGCUGCUAUGUAGAGGGAUUCCA--- Usp8; Kiaa0055; Ubpy mmu-miR-193 108 149 -GACCCUGAAAC----A---------------UCCGGUCAA |||||:|| || | |||||||| ACUGGGGCUGUGCUACUAGCACCAUAUAAUUCAGGCCAGUG Usp8; Kiaa0055; Ubpy mmu-miR-195 66 90 CGGUUAUAAA--GACA-CGACGAU- :|||: ||| ||||||| -AUAAUGGAUCGCUGCAGCUGCUAU Usp8; Kiaa0055; Ubpy mmu-miR-199a 93 115 CUUGUCCAUCAGA-CUUGUGACCC- ||| || |||||||||| ---GAGGGAUUCCAGAACACUGGGG Usp8; Kiaa0055; Ubpy mmu-miR-199a* 436 461 UUGGUUAC-ACG-----UCUGAUGACAU || || ||| |||||:||| --GCACUGUUGCACAUCAGACUGCUGG- Usp8; Kiaa0055; Ubpy mmu-miR-199b 93 115 CUUGUCCAUCAGA-UUUGUGACCC- ||| || :||||||||| ---GAGGGAUUCCAGAACACUGGGG Usp8; Kiaa0055; Ubpy mmu-miR-200c 576 599 -GGUAGUAAUGGGCCGUCAUAAU |::|:: :||||| ||||| UCUGUUGGCUUCCGGCUGUAUUU Usp8; Kiaa0055; Ubpy mmu-miR-211 89 116 UCCGUUUCCUACUGUUU-----CCCUU | :|:|||| ||:| |||: UGUAGAGGGAUUCCAGAACACUGGGGC Usp8; Kiaa0055; Ubpy mmu-miR-212 107 120 CCGGCACUGACCUCUGACAAU ||||| |:|||| ------CACUGG-GGCUGUG- Usp8; Kiaa0055; Ubpy mmu-miR-214 434 461 GACG-GACAGACACG-----GACGACA ||| ||||: |||||| UUGCACUGUUGCACAUCAGACUGCUGG Usp8; Kiaa0055; Ubpy mmu-miR-22 521 537 UGUCAAGAAGUUGACCGUCGAA ||||| ||:|||| ----CUCUUCUA--GGUAGCUG Usp8; Kiaa0055; Ubpy mmu-miR-27a 457 489 CGCCU---------UGAAUCGGU-GACACUU- :||| || ||||| ||||||| CUGGACACAGUUUAACAUAGCCUUCUGUGAAA Usp8; Kiaa0055; Ubpy mmu-miR-27b 463 489 CGUC---UUGAAUCGGU-GACACUU- ||| ||| ||||| ||||||| ACAGUUUAACAUAGCCUUCUGUGAAA Usp8; Kiaa0055; Ubpy mmu-miR-296 78 118 -UGUCC------UAACUCCC-------------CCCCGGGA :||| :| ||||| |||||: UGCAGCUGCUAUGUAGAGGGAUUCCAGAACACUGGGGCUG- Usp8; Kiaa0055; Ubpy mmu-miR-29a 96 119 UUGGCUAAAGUCU----ACCACGAU- |||| |||| ||| |||: ---GGAUUCCAGAACACUGGGGCUGU Usp8; Kiaa0055; Ubpy mmu-miR-301 421 443 CGAAAC-UGUUAUGAUAACGUGAC- || ||| :|||||||||| ---AUGUACAUAUUUAUUGCACUGU Usp8; Kiaa0055; Ubpy mmu-miR-320 345 373 AAGCGGG--AGAGUU-------GGGUCGAAAA |||: ||||| ||||||| --AGCCUCUUCUCAUUUCUAGCCCCAGCUC-- Usp8; Kiaa0055; Ubpy mmu-miR-324-3p 100 121 -GGUCGUCGUG-GACCCCGUCACC |||| || ||||||| ||| UCCAGA---ACACUGGGGCUGUGC Usp8; Kiaa0055; Ubpy mmu-miR-324-5p 76 101 -GUGGUU-ACGGG--AUC-CCCUACGC | ||: |||: ||| ||||| GCUGCAGCUGCUAUGUAGAGGGAUU-- Usp8; Kiaa0055; Ubpy mmu-miR-326 81 121 -UGAC-------CUCCU-------------UCCCGGGUCUCC :||| ||||: :||||: | AGCUGCUAUGUAGAGGGAUUCCAGAACACUGGGGCUGUGC-- Usp8; Kiaa0055; Ubpy mmu-miR-328 68 106 -UGCCUUCC--CGUC---------UCUCCC---GGUC- |:||| |||| |||||| |||| AAUGGAUCGCUGCAGCUGCUAUGUAGAGGGAUUCCAGA Usp8; Kiaa0055; Ubpy mmu-miR-33 529 544 GUUACGUUGAUGUUACGUG |:|:||:|||||| ---GGUAGCUGCAAUGCU- Usp8; Kiaa0055; Ubpy mmu-miR-337 517 538 UUUCCGUAGUAUAUCC-UCGACUU ||| || |||| ||||| --UGGCCUCUUCUAGGUAGCUGC- Usp8; Kiaa0055; Ubpy mmu-miR-339 540 565 ACUCG-AGGA---CCUC--CUGUCCCU || |:|| ||| ||||||| --UGCUUUCUUAAGGAAAUGACAGGGC Usp8; Kiaa0055; Ubpy mmu-miR-345 3 21 CGUGACCUGAUCCC-CAGUCGU ||| |||| |||:|| ----AGGAGUAGGCUGUCGGCU Usp8; Kiaa0055; Ubpy mmu-miR-424 99 120 -AGGUUUUGU-ACUUAACGACGAC ||||:|||| ||: ||||: UUCCAGAACACUGGG--GCUGUG- Usp8; Kiaa0055; Ubpy mmu-miR-431 441 465 GGACGUACUGCCGGACGUUCUGU- :|||| | | |||| :|||| GUUGCACAUCAGACUGCUGGACAC Usp8; Kiaa0055; Ubpy mmu-miR-449b 365 384 -GGUCGAUCGUUACGUGACGGA |||||| ||:|||||| |: CCCAGCU--CAGUGCACU-CUG Usp8; Kiaa0055; Ubpy mmu-miR-465-5p 368 389 AGUGUAGUCACGGUAAGAUUUAU- :| ||||||| |||:|||: -AGC-UCAGUGCAC-UCUGAAUGC Usp8; Kiaa0055; Ubpy mmu-miR-467a 409 427 CACAUCCACACACAUACAUAUA |||| ||| |||||| --AUAGGAAUGUAUAUGUAC-- Usp8; Kiaa0055; Ubpy mmu-miR-485-5p 327 353 CUUAAGU---AGUGCC--GGUCGGAGA- ||| |||| ||||||||| --UUUCCUAUUCACUGCUCCAGCCUCUU Usp8; Kiaa0055; Ubpy mmu-miR-486 73 99 GAGCCCCGUCGA-GU--CAUGUCCU- ||| |||||| | ||| |||: AUCGCUGCAGCUGCUAUGUAGAGGGA Usp8; Kiaa0055; Ubpy mmu-miR-490 516 533 GUCGUACCUCAGGAGGUCCAAC ||| ||:||:|||| ----UUGGCCUCUUCUAGGUA- Usp8; Kiaa0055; Ubpy mmu-miR-497 138 155 AUGUUUGGUGUCACACGACGAC ||::||| ||||||:| -UCAGGCCA----GUGCUGUUU Usp8; Kiaa0055; Ubpy mmu-miR-500 361 380 GACUUGGGAACGGGUCCACGUA |:||| ||:|| ||||| --UAGCCCCAGCUCA-GUGCAC Usp8; Kiaa0055; Ubpy mmu-miR-501 488 504 AAAGUGGGUCCCUGUUUCCUAA- :||:|| |||||||| ---AGCCUAG----AAAGGAUUU Usp8; Kiaa0055; Ubpy mmu-miR-543 372 389 UCUUCACGUGGCGCUUACAAA |||||||: :||||| --CAGUGCACUCUGAAUGC-- Usp8; Kiaa0055; Ubpy mmu-miR-592 445 469 -UGUAGUA--GCGUAUAACUGUGUUA- |||||| :|| ||||||:| CACAUCAGACUGCUG---GACACAGUU Usp8; Kiaa0055; Ubpy mmu-miR-652 208 231 ACGUGUUGGGAUCACCGCGGUAA- |||: ||:|| || |:|||| CGCAUU-CCUUACAGGAGUCAUUU Usp8; Kiaa0055; Ubpy mmu-miR-670 126 144 AAGUGGUGUAUGUGAGUCCCUA |||||:||| |:||||| -GCACCAUAUA-AUUCAGGC-- Usp8; Kiaa0055; Ubpy mmu-miR-673 99 121 GAGGUUCC-UGGUCUCGACACUC ||||: ||::|:|||||| UUCCAGAACACUGGGGCUGUGC- Usp8; Kiaa0055; Ubpy mmu-miR-674 345 379 AUGUGG--------------UGAGGGUAGAGUCACG- :|| :| |||| |||||||| --AGCCUCUUCUCAUUUCUAGC-CCCAGCUCAGUGCA Usp8; Kiaa0055; Ubpy mmu-miR-674* 88 121 AACAAGACUCU-----------ACCCUCGACAC- ||| |:|| |||| |||||| AUGUAGAGGGAUUCCAGAACACUGGG-GCUGUGC Usp8; Kiaa0055; Ubpy mmu-miR-675-5p 107 133 -UGACACCCGGGAAAGG---CGUGGU- |||| ||||: | |||||| CACUG-GGGCUGUGCUACUAGCACCAU Usp8; Kiaa0055; Ubpy mmu-miR-676* 78 97 -CGUUCAGGAUUCCAACAUCUCA |||: | ||| ||||||| UGCAGCUGCUA----UGUAGAGG Usp8; Kiaa0055; Ubpy mmu-miR-681 80 119 -UCGACGG-AC----------GGUC-----GCUCCGAC- ||||||: || |||| :|:||||| CAGCUGCUAUGUAGAGGGAUUCCAGAACACUGGGGCUGU Usp8; Kiaa0055; Ubpy mmu-miR-684 555 572 AACUGAACUUCCC-UUUUGA- |||| |||| |||||| AUGAC----AGGGCAAAACUA Usp8; Kiaa0055; Ubpy mmu-miR-687 199 225 -AGUAACGA-CGUAAGG----UCCUAUC |||| |: ||||||| |||| AUCAUAGUACGCAUUCCUUACAGGAG-- Usp8; Kiaa0055; Ubpy mmu-miR-689 70 117 -CCUGG-GGCGG-----------CUCGC-------------CCCUGC |||:| |:|| ||| | |||:| UGGAUCGCUGCAGCUGCUAUGUAGAGGGAUUCCAGAACACUGGGGCU Usp8; Kiaa0055; Ubpy mmu-miR-691 533 556 AAAAGACG----GAGAGAAGUCCUUA |||| ||:|||| ||||| ---GCUGCAAUGCUUUCUUAAGGAAA Usp8; Kiaa0055; Ubpy mmu-miR-693-3p 36 82 -AAUGUCGG--UGUAGA------------CUUU-------CGACG ||:||||| |||||| || ||||| AUUGCAGCCUCACAUCUAAUGCUUACAAAGAUAAUGGAUCGCUGCA Usp8; Kiaa0055; Ubpy mmu-miR-705 345 382 ACGGG-------------UGGGGUGGAGG---GUGG- |||: :||||| ||| |||: AGCCUCUUCUCAUUUCUAGCCCCAGCUCAGUGCACUC Usp8; Kiaa0055; Ubpy mmu-miR-709 340 369 AGGAGGACGGAGA-----------CGGAGG- |||| |||||| ||| || -GCUCCAGCCUCUUCUCAUUUCUAGCC-CCA Usp8; Kiaa0055; Ubpy mmu-miR-713 362 380 CGACACACGGA----AGUCACGU- ||| |||||||| ------AGCCCCAGCUCAGUGCAC Usp8; Kiaa0055; Ubpy mmu-miR-719 469 497 -UUGUAAA--AAGACA---UCGGCUCUA ||||| |||||| |||| ||| UAACAUAGCCUUCUGUGAAAGCCUAGAA Usp8; Kiaa0055; Ubpy mmu-miR-721 363 382 AAGGGGGAAAAUUAACGUGAC |||| |||||| -GCCCCAGCUCAG-UGCACUC Usp8; Kiaa0055; Ubpy mmu-miR-744 339 372 -CGACAAUCGG-----------GAUCGGGG-CGU ||| |||| |||||||| || UGCUCC-AGCCUCUUCUCAUUUCUAGCCCCAGCU Usp8; Kiaa0055; Ubpy mmu-miR-759 370 385 CAGUUUUAACAAACGUGAGACG |||: ||||||||| CUCAG-------UGCACUCUGA Usp8; Kiaa0055; Ubpy mmu-miR-762 352 374 CGAGACAGGGCCGGGGUCGGGG ||| |:|: ||||||||:| UCUCAUUUCUAGCCCCAGCUCA Usp8; Kiaa0055; Ubpy mmu-miR-764-3p 557 590 -UGUCAACGG--UGAU---------ACCGGAGGA |||| || |||| ||||:||| GACAGG-GCAAAACUAUUUUUCUGUUGGCUUCCG Usp8; Kiaa0055; Ubpy mmu-miR-770-3p 122 151 -GGUCGAGGUGC----AGUCCGGG--UGC |:||| |||: ||||||| :| ACUAGCACCAUAUAAUUCAGGCCAGUGCU Usp8; Kiaa0055; Ubpy mmu-miR-98 234 262 UUGUUAUGUUGAAU------GAUGGAGU- ||| ||||||| ||:|| || -UCAAAACAACUUUUUGAGUCUGCCCCAA Usp8; Kiaa0055; Ubpy mmu-miR-130a 434 441 ----------------------UACGGGAAAAUUGUAACGUGAC |||: :||||||||| CCUAGCUCAGAUAGGAAUGUAUAUGUACAUAUU-UAUUGCACUGU Usp8; Kiaa0055; Ubpy mmu-miR-130b 434 441 ----------------------UACGGGAAAGUAGUAACGUGAC |||: |:||||||||| CCUAGCUCAGAUAGGAAUGUAUAUGUACAUAU-UUAUUGCACUGU Usp8; Kiaa0055; Ubpy mmu-miR-193 141 148 ---GACCCUGAAACA-------------------UCCGGUCAA |||||:|| || |||||||| ACACUGGGGCUGUGCUACUAGCACCAUAUAAUUCAGGCCAGUG Usp8; Kiaa0055; Ubpy mmu-miR-199a 106 113 CU-------------------UGUCCAUCAGA-CUUGUGACCC | ||| || |||||||||| GGAUCGCUGCAGCUGCUAUGUAGAGGGAUUCCAGAACACUGGGG Usp8; Kiaa0055; Ubpy mmu-miR-199b 106 113 CU-------------------UGUCCAUCAGA-UUUGUGACCC | ||| || :||||||||| GGAUCGCUGCAGCUGCUAUGUAGAGGGAUUCCAGAACACUGGGG Usp8; Kiaa0055; Ubpy mmu-miR-301 434 441 ----CGAAACUGUUAU----------------GAUAACGUGAC ||| ||:|: :|||||||||| CCUAGCUCAGAUAGGAAUGUAUAUGUACAUAUUUAUUGCACUGU Usp8; Kiaa0055; Ubpy mmu-miR-301b 434 441 A---CGAAACUGUUAU----------------GGUAACGUGAC ||| ||:|: ::||||||||| CCUAGCUCAGAUAGGAAUGUAUAUGUACAUAUUUAUUGCACUGU Usp8; Kiaa0055; Ubpy mmu-miR-325 120 127 ---------------------UGUGAAUGACUCGUG--GAUGAUCC ||||| |:|| ||||||| GCUAUGUAGAGGGAUUCCAGAACACUG---GGGCUGUGCUACUAGC Usp8; Kiaa0055; Ubpy mmu-miR-339 557 564 ACU----------------CGAG-GA---CCUC--CUGUCCCU |||: || ||| ||||||| UCUUCUAGGUAGCUGCAAUGCUUUCUUAAGGAAAUGACAGGGC Usp8; Kiaa0055; Ubpy mmu-miR-467a 415 422 CAC---------------------------AUCCACACACAUACAUAUA |||| |||||||| UCUGAAUGCUCUAGAAUGACCUAGCUCAGAUAGGA------AUGUAUAUG Usp8; Kiaa0055; Ubpy mmu-miR-485-5p 40 47 CUUAAGUAGU-GCCG--------------------GUCGGAGA ||:| |||| ||||||| GAGUAGGCUGUCGGCUUAUUGACGUCUCCAAAUUGCAGCCUCA Usp8; Kiaa0055; Ubpy mmu-miR-485-5p 344 351 CU----------------------UAAGUAGUGCCGGUCGGAGA ||||| :| ||||||||| AACCAUCAUAACCUCCAUUUUCCUAUUCACUGCU-CCAGCCUCUU Usp8; Kiaa0055; Ubpy mmu-miR-501 495 502 AAAG-------------------------UGGGUCCCUGUUUCCUAA :||:|| |||||||| GACACAGUUUAACAUAGCCUUCUGUGAAAGCCUAG----AAAGGAUUU Usp8; Kiaa0055; Ubpy mmu-miR-671 582 589 GGA-------------------GGUCGGGGAGGUC-CCGAAGGA |:| ::::||: ||||||| UUAAGGAAAUGACAGGGCAAAACUA-UUUUUCUGUUGGCUUCCG Usp8; Kiaa0055; Ubpy mmu-miR-674 370 377 AUGUGGUGA----------------------GGGUAGAGUCACG ||| || |||| |||||||| U-CACUGCUCCAGCCUCUUCUCAUUUCUAGCCCCAGCUCAGUGCA Usp8; Kiaa0055; Ubpy mmu-miR-676* 89 96 -------------------------CGUUCAGGAUUCCAACAUCUCA |||: | ||| ||||||| AUGCUUACAAAGAUAAUGGAUCGCUGCAGCUGCUA----UGUAGAGG Usp8; Kiaa0055; Ubpy mmu-miR-713 371 378 ----CGACACACGGA---------------------AGUCACGU ||| |||| |||||||| CACUGCUCCA-GCCUCUUCUCAUUUCUAGCCCCAGCUCAGUGCAC Usp8; Kiaa0055; Ubpy mmu-miR-759 377 384 CAGUUUUAACAA---------------------ACGUGAGACG ||||||||| UCCAGCCUCUUCUCAUUUCUAGCCCCAGCUCAGUGCACUCUGA Usp8; Kiaa0055; Ubpy mmu-let-7b 304 324 uUGGUGUGUUGGAUGAUGGAGu |||| || |:| |: ||||| tACCAAACCATC-ATAACCTCc Usp8; Kiaa0055; Ubpy mmu-let-7c 304 324 uUGGUAUGUUGGAUGAUGGAGu |||| || |:| |: ||||| tACCAAACCATC-ATAACCTCc Usp8; Kiaa0055; Ubpy mmu-let-7e 330 351 uGAUAUGUUG-GAGGAUGGAGu |||| || : |||| :|||| cCTATTCACTGCTCCAGCCTCt Usp8; Kiaa0055; Ubpy mmu-let-7g 26 47 UG-ACAUGUUUGAUGAUGGAGU || | | ||||:|:| :||||| ACGTCTCCAAATTGCAGCCTCA Usp8; Kiaa0055; Ubpy mmu-let-7i 26 47 UGUCG-UGUUUGAUGAUGGAGU ||: | ||||:|:| :||||| ACGTCTCCAAATTGCAGCCTCA Usp8; Kiaa0055; Ubpy mmu-miR-106a 431 451 auggACGUGACAAUCGUGAAac ||||||||| |||| | ttatTGCACTGTT-GCACATca Usp8; Kiaa0055; Ubpy mmu-miR-106b 432 451 uagACGUGACAGUCGUGAAau ||||||||: |||| | tatTGCACTGTT-GCACATca Usp8; Kiaa0055; Ubpy mmu-miR-122a 193 216 UGUUUGUGGUAACA-GUGUGAGGu |||| :|:||| || |:||:||| ACAACTATCATAGTACGCATTCCt Usp8; Kiaa0055; Ubpy mmu-miR-126-3p 285 308 cGU-AAUAAU--GAGUGCCAUGcu || |||||| ||| :||||| aCATTTATTATTCTCTTGGTACca Usp8; Kiaa0055; Ubpy mmu-miR-128b 93 114 CUUUCUCUGGCCAAGUGACACu ||::|| || | ||||| | GAGGGATTCCAGAACACTGGGg Usp8; Kiaa0055; Ubpy mmu-miR-130a 421 441 UACGGGAAAAUUGUAACGUGAC |||: | | | :||||||||| ATGTACATAT-TTATTGCACTG Usp8; Kiaa0055; Ubpy mmu-miR-130a 361 381 uaCGGGAAAAUU--GUAACGUGAc |||| |: || |||||| taGCCC---CAGCTCAGTGCACTc Usp8; Kiaa0055; Ubpy mmu-miR-130b 421 441 UACGGGAAAGUAGUAACGUGAC |||: | | : |:||||||||| ATGTACATAT-TTATTGCACTG Usp8; Kiaa0055; Ubpy mmu-miR-130b 361 381 uaCGGGAAAGUAGUAACGUGAc |||| | ||| |||||| taGCCCCAGC-TCAGTGCACTc Usp8; Kiaa0055; Ubpy mmu-miR-133a 79 104 uGUCGACCA-ACUUC-CCCU--GGUu |||||| | || || |||| ||| gCAGCTGCTATGTAGAGGGATTCCAg Usp8; Kiaa0055; Ubpy mmu-miR-136 609 631 AGGUAGUAGUUUUGUUUACCUca ||: | || ||||||||||| TCTTTATTCTAAACAAATGGAaa Usp8; Kiaa0055; Ubpy mmu-miR-141 129 151 GGUAGAAAUGGUCU-GUCACAAu |||| | :|||: ||||| | CCATATAATTCAGGCCAGTGCTg Usp8; Kiaa0055; Ubpy mmu-miR-145 93 114 uUCCCUAAGGACCCUUUUGACCug ||||||||| ||| ||||| gAGGGATTCC--AGAACACTGGgg Usp8; Kiaa0055; Ubpy mmu-miR-148a 583 607 uguuucaaGACAU---CACGUGAcu ||||| ||||||| gcttccggCTGTATTTGTGCACTaa Usp8; Kiaa0055; Ubpy mmu-miR-152 586 607 gGGUUCAAGACAGUACGUGAcu ||:: | : |::|||||| tCCGGCTGTATTTGTGCACTaa Usp8; Kiaa0055; Ubpy mmu-miR-153 72 93 CUAGUGAAAACACUGAUACGUu ||||:|| | :|||||:| GATCGCTGCAGCTGCTATGTAg Usp8; Kiaa0055; Ubpy mmu-miR-15a 137 154 guGUUUGGUAAUACACGACGAu ||::||| ||||||:| ttCAGGCCA----GTGCTGTTt Usp8; Kiaa0055; Ubpy mmu-miR-15b 132 154 ACAUUUGGUAC-UACACGACGAu | ||| :|| | ||||||:| TATAATTCAGGCCAGTGCTGTTt Usp8; Kiaa0055; Ubpy mmu-miR-17-3p 59 83 AUG-UUC----ACGGGAGUGACGUCa ||| ||| || ||:|||||| TACAAAGATAATG-GATCGCTGCAGc Usp8; Kiaa0055; Ubpy mmu-miR-17-5p 429 451 UGAUGGACGUGACAUUCGUGAAac |:| :|||||||| |||| | ATTTATTGCACTGT-TGCACATca Usp8; Kiaa0055; Ubpy mmu-miR-18 112 133 auaGACGUGAUCUACGUGGAAU |||::||| ||||| || gggCTGTGCTACTAGCACCATA Usp8; Kiaa0055; Ubpy mmu-miR-183 130 153 GUCACUUAAG-AUGGUCACGGUAu || ||||| :|||||||::| CATATAATTCAGGCCAGTGCTGTt Usp8; Kiaa0055; Ubpy mmu-miR-186 487 507 UUCGGGUUUUCCUCUUAAGAAAc |||||:|:|| ||:|||:||| AAGCCTAGAA--AGGATTTTTTc Usp8; Kiaa0055; Ubpy mmu-miR-191 81 106 UCGACGA-AAA---CCCUAAGGcaac ||||||| | | |||||||| AGCTGCTATGTAGAGGGATTCCagaa Usp8; Kiaa0055; Ubpy mmu-miR-193 123 148 GACCCUGAAACA-----UCCGGUCAa || | || | | |||||||| CTAGCACCATATAATTCAGGCCAGTg Usp8; Kiaa0055; Ubpy mmu-miR-195 65 88 CGGUUA--UAAAGAC-ACGACGAU | :||| || ||| ||||||| GATAATGGATCGCTGCAGCTGCTA Usp8; Kiaa0055; Ubpy mmu-miR-199a 90 113 CUUGUCCAUCA-GACUUGUGACCC | | ||| | | | |||||||||| GTAGAGGGATTCCAGAACACTGGG Usp8; Kiaa0055; Ubpy mmu-miR-199a* 434 461 uugGUUAC-AC-----GUCUGAUGACau || || || ||||||:||| ttgCACTGTTGCACATCAGACTGCTGga Usp8; Kiaa0055; Ubpy mmu-miR-199b 90 113 CUUGUCCAUCAGAU-UUGUGACCC | | ||| | || | ||||||||| GTAGAGGGATTCCAGAACACTGGG Usp8; Kiaa0055; Ubpy mmu-miR-200c 577 598 GGUAGUAAUGGGCCGUCAUAAu |::|:: :||||| ||||| CTGTTGGCTTCCGGCTGTATTt Usp8; Kiaa0055; Ubpy mmu-miR-211 77 99 ucCGUUUCC--UACUGUUUCCCUu |||: | ||| :|:||||| ctGCAGCTGCTATG-TAGAGGGAt Usp8; Kiaa0055; Ubpy mmu-miR-212 101 120 ccggcacUGACCUCUGACAau ||||| |:|||| ccagaacACTGG-GGCTGTgc Usp8; Kiaa0055; Ubpy mmu-miR-22 517 536 ugucaAGAAGUUGACCGUCGAa ||||| | ||:|||| tggccTCTTCTA--GGTAGCTg Usp8; Kiaa0055; Ubpy mmu-miR-27a 466 487 cgccUUGAAUCGG-UGACACUU ||| ||||| ||||||| gtttAACATAGCCTTCTGTGAA Usp8; Kiaa0055; Ubpy mmu-miR-291b-3p 59 86 cUGUUUGUUUUACCU----ACGU-GAaa ||||| | |||||| |||| || tACAAAGATAATGGATCGCTGCAGCTgc Usp8; Kiaa0055; Ubpy mmu-miR-296 93 118 uguCCUAA---CU--CCCCCCCGgga ||||| || ||||| gagGGATTCCAGAACACTGGGGCtgt Usp8; Kiaa0055; Ubpy mmu-miR-29a 93 117 uuggCUAAAGUCU----ACCACGAu |||| |||| ||| ||| gaggGATTCCAGAACACTGGGGCTg Usp8; Kiaa0055; Ubpy mmu-miR-301 418 441 cgAAAC-UGUUAU-GAUAACGUGAC | || || ||| :|||||||||| taTATGTAC-ATATTTATTGCACTG Usp8; Kiaa0055; Ubpy mmu-miR-301b 416 441 ACG-AAAC-UGUUAU-GGUAACGUGAC ||: | || || ||| ::||||||||| TGTATATGTAC-ATATTTATTGCACTG Usp8; Kiaa0055; Ubpy mmu-miR-301b 17 44 aCGA--AACUGUUAUGG--UAACGUgac ||| |||||: || |||||| gGCTTATTGACGTCTCCAAATTGCAgcc Usp8; Kiaa0055; Ubpy mmu-miR-302c 106 132 gGUGACUUUG-UAC-CU--UCGUGaac |||||:::| :|| | ||||| aCACTGGGGCTGTGCTACTAGCACcat Usp8; Kiaa0055; Ubpy mmu-miR-320 351 374 AAGCG-GGAGAGUUGGGUCGAaaa ||| | ::||| : ||||||| TTCTCATTTCTAGCCCCAGCTcag Usp8; Kiaa0055; Ubpy mmu-miR-324-3p 101 120 GGUCGUCGUGGACCCCGUCACc |||| | || ||||||| ||| CCAG-AACA-CTGGGGCTGTGc Usp8; Kiaa0055; Ubpy mmu-miR-324-5p 75 102 GUG--GUU-ACG--GGAUC-CCCUACGc |:| ||: ||| : ||| ||||| | CGCTGCAGCTGCTATGTAGAGGGATTCc Usp8; Kiaa0055; Ubpy mmu-miR-325 106 127 UGUGA--AUGACUCGUGGAUGAUCc ||||| :||| | ||||||| ACACTGGGGCTGTG---CTACTAGc Usp8; Kiaa0055; Ubpy mmu-miR-326 87 107 ugACCUCCUUCCC--GGGUCUcc || || |||| :||||| taTGTAG--AGGGATTCCAGAac Usp8; Kiaa0055; Ubpy mmu-miR-328 69 104 UGCCUUCC--CGUC---------UCUCCC---GGUC |:||| | |||| |||||| |||| ATGGATCGCTGCAGCTGCTATGTAGAGGGATTCCAG Usp8; Kiaa0055; Ubpy mmu-miR-33 526 544 GUUACGUUGAUGUUACGug | | |:|:||:|||||| CTAGGTAGCTGCAATGCtt Usp8; Kiaa0055; Ubpy mmu-miR-337 515 538 uuuCCGUAGUAUAUCC-UCGACuu ||| || | |||| ||||| tttGGCCTCTTCTAGGTAGCTGca Usp8; Kiaa0055; Ubpy mmu-miR-339 540 564 ACUCGAGGA--CC--UCCUGUCCCu || :||:| || | ||||||| TGCTTTCTTAAGGAAATGACAGGGc Usp8; Kiaa0055; Ubpy mmu-miR-345 1 20 cgugaCCUGAUCC-CCAGUCGu ||| |||| |||:|| --agaGGAGTAGGCTGTCGGCt Usp8; Kiaa0055; Ubpy mmu-miR-424 100 125 AGGUUUUGU-ACUU--A-ACGACGAc ||||:|||| ||:: | |||| || TCCAGAACACTGGGGCTGTGCTACTa Usp8; Kiaa0055; Ubpy mmu-miR-449b 366 384 GGUCGAUCGUUACGUGAcgga |||||| ||:|||||| CCAGCT--CAGTGCACTctga Usp8; Kiaa0055; Ubpy mmu-miR-465-5p 366 387 aGUGUAGUCACGGUAAGAUUUAu || |||||| || |||:||| cCAGCTCAGTG-CACTCTGAATg Usp8; Kiaa0055; Ubpy mmu-miR-485-5p 331 351 cuUAAGUAGUGCCGGUCGGAGA ||||| ::| ||||||||| ctATTCACTGC-TCCAGCCTCT Usp8; Kiaa0055; Ubpy mmu-miR-485-5p 25 47 CUUAAGUAG--UGCCGGUCGGAGa || || | |: | ||||||| GACGTCTCCAAATTG-CAGCCTCa Usp8; Kiaa0055; Ubpy mmu-miR-490 512 533 gucguACCUCAGGAGGUCCAac ||| ||:||:|||| tctttTGGCCTCTTCTAGGTag Usp8; Kiaa0055; Ubpy mmu-miR-497 137 154 AUGUUUGGUGUCACACGACGAc | ||::||| ||||||:| TTCAGGCCA----GTGCTGTTt Usp8; Kiaa0055; Ubpy mmu-miR-500 360 379 GACUUGGGAACGGGUCCACGUa || |:||| ||:|| ||||| CT-AGCCCCAGCTCA-GTGCAc Usp8; Kiaa0055; Ubpy mmu-miR-501 485 502 aaaguGGGUCCCUGUUUCCUAA ||:|| |||||||| gaaagCCTAG----AAAGGATT Usp8; Kiaa0055; Ubpy mmu-miR-543 370 390 ucuUCACGUGGCGCUUACAAa |||||||: :||||| | ctcAGTGCACTCTGAATGCTc Usp8; Kiaa0055; Ubpy mmu-miR-592 446 467 UGUAG--UAGCGUAUAACUGUGUUA ||||| | :|| | ||||||:| ACATCAGACTGC---TGGACACAGT Usp8; Kiaa0055; Ubpy mmu-miR-652 206 229 ACGUGU-UGGGAUCACCGCGGUAA | |:|| ||:|| || |:|||| TACGCATTCCTTACAGGAGTCATT Usp8; Kiaa0055; Ubpy mmu-miR-670 125 145 aaGUGGUGUAUGUGAGUCCcua |||||:||| |:||||| agCACCATATA-ATTCAGGcca Usp8; Kiaa0055; Ubpy mmu-miR-671 564 589 ggaggucggggAGGUC--CCGAAGGa |:| | ||||||| caaaactatttTTCTGTTGGCTTCCg Usp8; Kiaa0055; Ubpy mmu-miR-673 99 121 gAGGU-UCCUGGUCUCGACACuc |||| | ||::|:|||||| tTCCAGAACACTGGGGCTGTGct Usp8; Kiaa0055; Ubpy mmu-miR-674 353 377 auGUGGUGA---GGGUAGAGUCACG ||:: || |||| |||||||| ctCATTTCTAGCCCCAGCTCAGTGC Usp8; Kiaa0055; Ubpy mmu-miR-674* 97 119 aacAAGAC-UCUACCCUCGACAC | | | | | ||:|||||| gatTCCAGAACACTGGGGCTGTG Usp8; Kiaa0055; Ubpy mmu-miR-675-5p 108 131 UGACACCCGGGA--AAGG-CGUGGU |||| ||||: | | |: |||||| ACTG-GGGCTGTGCTACTAGCACCA Usp8; Kiaa0055; Ubpy mmu-miR-681 96 117 uCGACGGAC-GGUCGCUCCGAC | | || | || :|:||||| gGATTCCAGAACACTGGGGCTG Usp8; Kiaa0055; Ubpy mmu-miR-684 550 570 aaCUGAACU-UCCC-UUUUGA || ||| |||| |||||| agGAAATGACAGGGCAAAACT Usp8; Kiaa0055; Ubpy mmu-miR-687 200 226 AGUAACG-ACGUAAG----GUCCUauc |||| |: |||||| ||||| TCATAGTACGCATTCCTTACAGGAgtc Usp8; Kiaa0055; Ubpy mmu-miR-689 96 116 CCUGGGG-CGGCUCGCCCCUGc |||::|| | | | |||:| GGATTCCAGAACA-CTGGGGCt Usp8; Kiaa0055; Ubpy mmu-miR-691 530 555 aaaaGACG----GAGAGAAGUCCUUa |||| ||:|||| ||||| gtagCTGCAATGCTTTCTTAAGGAAa Usp8; Kiaa0055; Ubpy mmu-miR-693-3p 37 60 AAUGUCG--GUGUAGACUUUCGAcg ||:|||| ||||||| || ||| TTGCAGCCTCACATCT-AATGCTta Usp8; Kiaa0055; Ubpy mmu-miR-705 328 348 ACGGGUGGG-GUGGAGGGUGG | ||:|::| | |||| :|| TTCCTATTCACTGCTCCAGCC Usp8; Kiaa0055; Ubpy mmu-miR-709 329 351 AGG---AG-GACGGAGACGGAGg ||| || ||||: | ||||| TCCTATTCACTGCTCCAGCCTCt Usp8; Kiaa0055; Ubpy mmu-miR-713 362 378 cgacacaCGGAAGUCACGU || |||||||| agccccaGC--TCAGTGCA Usp8; Kiaa0055; Ubpy mmu-miR-719 470 496 UUGUA--AAAAGACA---UCGGCUCUa ||||| |||||| |||| ||| AACATAGCCTTCTGTGAAAGCCTAGAa Usp8; Kiaa0055; Ubpy mmu-miR-721 358 381 AAG---GGGGAAAAUUAACGUGAc ||| |||| | | |||||| TTCTAGCCCCAGCTCAGTGCACTc Usp8; Kiaa0055; Ubpy mmu-miR-744 347 371 cGACAA---UCGGGAUCGGGG-CGu || || | ::|||||||| || cCTCTTCTCATTTCTAGCCCCAGCt Usp8; Kiaa0055; Ubpy mmu-miR-759 363 384 caguuuuaacaaACGUGAGACg ||||||||| gccccagctcagTGCACTCTGa Usp8; Kiaa0055; Ubpy mmu-miR-764-3p 568 589 UG-UCAACGGUGAUACCGGAGGa || | || :| | ||||:||| ACTATTTTTCTGT-TGGCTTCCg Usp8; Kiaa0055; Ubpy mmu-miR-770-3p 123 148 GGUCGAGGUG----CAGUCCGGgugc |:||| |||: ||||||| CTAGCACCATATAATTCAGGCCagtg Usp8; Kiaa0055; Ubpy mmu-miR-98 233 260 uuGUUAUGUUGAA----U--GAUGGAGU ||| ||||||| | ||:|| || ttCAAAACAACTTTTTGAGTCTGCCCCA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Usp8 RAID00039390 mmu-miR-186-5p miRNA MIMAT0000215 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID00048671 mmu-miR-874-3p miRNA MIMAT0004853 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6559 Usp8 RAID00054045 mmu-miR-206-3p miRNA MIMAT0000239 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID00123202 mmu-miR-340-5p miRNA MIMAT0004651 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID00204089 mmu-miR-136-5p miRNA MIMAT0000148 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID00253135 mmu-miR-154-5p miRNA MIMAT0000164 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID00288675 mmu-miR-7225-3p miRNA MIMAT0028419 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID00538538 mmu-miR-199a-5p miRNA MIMAT0000229 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID00562107 mmu-miR-181b-5p miRNA MIMAT0000673 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID00604909 mmu-let-7f-5p miRNA MIMAT0000525 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID00635323 mmu-miR-485-5p miRNA MIMAT0003128 Usp8 mRNA 84092 Prediction 0.2202 Usp8 RAID00672388 mmu-miR-370-3p miRNA MIMAT0001095 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID00713793 mmu-miR-10a-5p miRNA MIMAT0000648 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID00848604 mmu-miR-7688-5p miRNA MIMAT0029906 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID00859575 mmu-miR-339-5p miRNA MIMAT0000584 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6478 Usp8 RAID00905265 mmu-miR-144-3p miRNA MIMAT0000156 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID00966079 mmu-miR-6954-5p miRNA MIMAT0027808 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID00999128 mmu-miR-9-5p miRNA MIMAT0000142 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01033340 mmu-miR-19a-5p miRNA MIMAT0004660 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01041310 mmu-miR-1192 miRNA MIMAT0005850 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01094529 mmu-miR-23a-3p miRNA MIMAT0000532 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01161190 mmu-miR-101b-3p miRNA MIMAT0000616 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01163962 mmu-miR-721 miRNA MIMAT0003515 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID01219624 mmu-miR-590-3p miRNA MIMAT0004896 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01221031 mmu-miR-7657-5p miRNA MIMAT0029820 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01329012 mmu-miR-486a-3p miRNA MIMAT0017206 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01358799 mmu-miR-155-5p miRNA MIMAT0000165 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01383209 mmu-miR-98-5p miRNA MIMAT0000545 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01416810 mmu-miR-654-3p miRNA MIMAT0004898 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01441830 mmu-miR-19a-3p miRNA MIMAT0000651 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6478 Usp8 RAID01525268 mmu-miR-181a-5p miRNA MIMAT0000210 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID01533067 mmu-miR-6951-3p miRNA MIMAT0027803 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01610122 mmu-miR-193a-3p miRNA MIMAT0000223 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01611195 mmu-miR-130b-3p miRNA MIMAT0000387 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID01612122 mmu-let-7i-5p miRNA MIMAT0000122 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01624253 mmu-miR-326-5p miRNA MIMAT0017027 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01635428 mmu-miR-141-3p miRNA MIMAT0000153 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01646056 mmu-miR-363-3p miRNA MIMAT0000708 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID01673720 mmu-miR-181c-5p miRNA MIMAT0000674 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID01713818 mmu-miR-7650-3p miRNA MIMAT0029803 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01725593 mmu-miR-292b-5p miRNA MIMAT0029864 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01766745 mmu-miR-19b-3p miRNA MIMAT0000513 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6559 Usp8 RAID01842064 mmu-let-7a-5p miRNA MIMAT0000521 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01856376 mmu-miR-3552 miRNA MIMAT0035715 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01857905 mmu-miR-205-5p miRNA MIMAT0000238 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID01900046 mmu-miR-10b-5p miRNA MIMAT0000208 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID02029768 mmu-miR-148b-3p miRNA MIMAT0000580 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6478 Usp8 RAID02042149 mmu-let-7g-5p miRNA MIMAT0000121 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID02046373 mmu-miR-27b-3p miRNA MIMAT0000126 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID02122933 mmu-miR-32-5p miRNA MIMAT0000654 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID02155661 mmu-miR-301a-3p miRNA MIMAT0000379 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID02240828 mmu-miR-335-5p miRNA MIMAT0000766 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID02310383 mmu-miR-466l-3p miRNA MIMAT0005830 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID02318186 mmu-miR-382-5p miRNA MIMAT0000747 Usp8 mRNA 84092 Prediction 0.2202 Usp8 RAID02339337 mmu-miR-224-5p miRNA MIMAT0000671 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID02371457 mmu-miR-505-3p miRNA MIMAT0003513 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID02379573 mmu-miR-193b-3p miRNA MIMAT0004859 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID02451914 mmu-miR-713 miRNA MIMAT0003504 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID02459880 mmu-miR-27a-3p miRNA MIMAT0000537 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID02812404 mmu-miR-301b-3p miRNA MIMAT0004186 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID02954640 mmu-let-7b-5p miRNA MIMAT0000522 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID02959172 mmu-miR-493-5p miRNA MIMAT0017276 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03107555 mmu-miR-101a-3p miRNA MIMAT0000133 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03133823 mmu-miR-547-3p miRNA MIMAT0003173 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03215942 mmu-miR-152-3p miRNA MIMAT0000162 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6478 Usp8 RAID03274353 mmu-miR-22-3p miRNA MIMAT0000531 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03275713 mmu-miR-23b-3p miRNA MIMAT0000125 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03284406 mmu-miR-7116-3p miRNA MIMAT0028130 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03299780 mmu-miR-292a-5p miRNA MIMAT0000369 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03304277 mmu-miR-130a-3p miRNA MIMAT0000141 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6308 Usp8 RAID03316200 mmu-miR-290a-5p miRNA MIMAT0000366 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03407760 mmu-miR-181d-5p miRNA MIMAT0004324 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6478 Usp8 RAID03425158 mmu-let-7d-5p miRNA MIMAT0000383 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03453207 mmu-miR-1962 miRNA MIMAT0009435 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03471516 mmu-miR-486b-3p miRNA MIMAT0014944 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03500952 mmu-miR-221-3p miRNA MIMAT0000669 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03548477 mmu-miR-495-3p miRNA MIMAT0003456 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03554798 mmu-miR-148a-3p miRNA MIMAT0000516 Usp8 mRNA 84092 CLIP-seq//Prediction 0.6478 Usp8 RAID03562016 mmu-miR-294-5p miRNA MIMAT0004574 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03571680 mmu-let-7e-5p miRNA MIMAT0000524 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03601707 mmu-miR-1a-3p miRNA MIMAT0000123 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03629820 mmu-miR-669c-5p miRNA MIMAT0003479 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03649076 mmu-miR-8103 miRNA MIMAT0031407 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03662726 mmu-miR-5133 miRNA MIMAT0020644 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03738322 mmu-miR-182-5p miRNA MIMAT0000211 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03897226 mmu-miR-7669-3p miRNA MIMAT0029845 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03949628 mmu-miR-7660-5p miRNA MIMAT0029826 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID03957359 mmu-miR-222-3p miRNA MIMAT0000670 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID04008968 mmu-miR-1231-3p miRNA MIMAT0022358 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID04055780 mmu-miR-7678-3p miRNA MIMAT0029871 Usp8 mRNA 84092 Prediction 0.1828 Usp8 RAID04065450 mmu-let-7c-5p miRNA MIMAT0000523 Usp8 mRNA 84092 Prediction 0.1828