DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Aurka | mmu-miR-2136 | beg:396 | end:415 | pic:3' GTGTAGAGTCAGTTGTGGGTC 5'& || |.|.| ..||||||| &5' -AC-TTTTAAGTGACACCCA- 3' |
Aurka | mmu-miR-17star | beg:169 | end:187 | pic:3' GATGTTCACGGGAGTGACGTCA 5'& ||| |..| |||||||| &5' ----AAG-GTTC-CACTGCAG- 3' |
Aurka | mmu-miR-27b | beg:22 | end:36 | pic:3' CGTCTTGAATCGGTGACACTT 5'& || |||||||. &5' ----------GCAACTGTGAG 3' |
Aurka | mmu-miR-582-5p | beg:20 | end:34 | pic:3' TCATTGACCAACTTGTTGACAT 5'& | .|||||||. &5' -----------GTGCAACTGTG 3' |
Aurka | mmu-miR-128 | beg:235 | end:254 | pic:3' TTTCTCTGGCCA-AGTGACACT 5'& |.|. ||| ||||||||. &5' ---GGGGGGGGTCTCACTGTGG 3' |
Aurka | mmu-miR-145star | beg:116 | end:127 | pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||||||| &5' -------------TCCAGGAA- 3' |
Aurka | mmu-miR-665 | beg:48 | end:64 | pic:3' TCCCTGGAGTCGGAGGACCA 5'& .|| |||||||| &5' ----GCCAC--CCTCCTGG- 3' |
Aurka | mmu-miR-1895 | beg:498 | end:514 | pic:3' AGGAGGAGCAGGAG-GAGCCCCC 5'& ||| |||||||| &5' ----------CCTGACTCGGGGG 3' |
Aurka | mmu-miR-203star | beg:0 | end:16 | pic:3' ACAACTTGACAGTTCTTGGTGA 5'& |.| || ||||||| &5' ----GGAA--TCCTGAACCAC- 3' |
Aurka | mmu-miR-1967 | beg:455 | end:467 | pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& ||||||||| &5' --------------GGATCCTCA 3' |
Aurka | mmu-miR-3472 | beg:523 | end:542 | pic:3' CCAAGGAAGGT-CGAAGACCGATAAT 5'& || |.| ||||||| &5' ---------CATGTTAAAGGCTATT- 3' |
Aurka | mghv-miR-M1-2 | beg:230 | end:247 | pic:3' TTTCTCCCCCTCTCCCCCAGAC 5'& |||.|.|||||||| &5' -------GGGGGGGGGGGTCT- 3' |
Aurka | mmu-miR-124 | beg:73 | end:92 | pic:3' CCGTAAGTGGCGCACGGAAT 5'& || ||| | |||||||. &5' -GCCCTCA--GGGTGCCTTG 3' |
Aurka | mmu-miR-1197 | beg:215 | end:230 | pic:3' TCTTCATCTGGTA-CACAGGAT 5'& ||| ||||||| &5' ---------CCAAGGTGTCCT- 3' |
Aurka | mmu-miR-302cstar | beg:520 | end:536 | pic:3' CGTCCATTGGGGTACAATTTCG 5'& |. |||||||||| &5' --------CTGCATGTTAAAG- 3' |
Aurka | mcmv-miR-m108-2-3p | beg:303 | end:325 | pic:3' TGGC-CAG--TGAGCAGAGCTCAGTG 5'& | || |||. |.|.||||| &5' ---GTGTATAACTTA--TTGGGTCAC 3' |
Aurka | mcmv-miR-m21-1 | beg:179 | end:197 | pic:3' GCCGAAC-TTGCACAGGGGATA 5'& || |.| ||||||||| &5' -----TGCAGC-TGTCCCCTA- 3' |
Aurka | mcmv-miR-M23-2 | beg:183 | end:203 | pic:3' GGCGAACTGGCTCCGGGGGTA 5'& || || || |||.|| &5' --GC-TGTCCCCTACCCTCA- 3' |
Aurka | mcmv-miR-m59-1 | beg:456 | end:477 | pic:3' GACTGCCAGCTCCGTGACGATT 5'& ||. || || |||||||| &5' --GATCCTC-AGCCACTGCTA- 3' |
Aurka | mghv-miR-M1-3 | beg:46 | end:70 | pic:3' TTCGCGTT-GAGGACGAGTGGAG 5'& |||| || |||||| | |||| &5' AAGC-CACCCTCCTGGAC-CCTC 3' |
Aurka | mmu-let-7bstar | beg:287 | end:309 | pic:3' CCCTTC-C-GTCATCCAACATATC 5'& ||| | ||| || |||.|| &5' ---AAGTGCCAG-AGTGTGTGTA- 3' |
Aurka | mmu-miR-103 | beg:126 | end:147 | pic:3' AGTATCGGGACA-TGTTACGACGA 5'& ||| || |||||||| &5' ------CCCAAGAACCATGCTGCT 3' |
Aurka | mmu-miR-107 | beg:126 | end:147 | pic:3' ACTATCGGGACA-TGTTACGACGA 5'& ||| || |||||||| &5' ------CCCAAGAACCATGCTGCT 3' |
Aurka | mmu-miR-124 | beg:470 | end:493 | pic:3' CCGTAAG--TGGCGCACGGAAT 5'& || .|| .|||||||. &5' -GCTACGGAGCC-TGTGCCTTG 3' |
Aurka | mmu-miR-125a-3p | beg:260 | end:278 | pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& || |||. |||||||| &5' -----CC-AGAGA-TCACCTGT 3' |
Aurka | mmu-miR-125a-5p | beg:65 | end:86 | pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& |||..| ||||||| &5' TCATGGCTGCC-----CTCAGGG- 3' |
Aurka | mmu-miR-125b-5p | beg:65 | end:86 | pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& ||| . ||||||| &5' TCATGGCTGCC---CTCAGGG- 3' |
Aurka | mmu-miR-1274a | beg:484 | end:506 | pic:3' ACCGCGG-ACTTGTCCCTGGACT 5'& |.||| || | ||||||| &5' --GTGCCTTGTCTTGAGACCTGA 3' |
Aurka | mmu-miR-128 | beg:13 | end:35 | pic:3' TTTCTCTGGC--CAAG-TGACACT 5'& |.|| || ||||||| &5' -----GGCCACCGTGCAACTGTGA 3' |
Aurka | mmu-miR-15a | beg:128 | end:147 | pic:3' GTGTTTGGTAATACACGACGAT 5'& || .||||| ||||||| &5' CAAGAACCA-----TGCTGCT- 3' |
Aurka | mmu-miR-15b | beg:131 | end:147 | pic:3' ACATTTGGTACTACACGACGAT 5'& .||||| ||||||| &5' ---GAACCA-----TGCTGCT- 3' |
Aurka | mmu-miR-16 | beg:127 | end:147 | pic:3' GCGGTTATAAATGCACGACGAT 5'& |||| ||||||| &5' --CCAAGAACCA--TGCTGCT- 3' |
Aurka | mmu-miR-182 | beg:281 | end:300 | pic:3' GCCACACTCAAGATGGTA----ACGGTTT 5'& .|| |||||.| &5' -------------GCCTTCAAGTGCCAGA 3' |
Aurka | mmu-miR-183 | beg:263 | end:284 | pic:3' TCACTTAAGATGGTCACGGTAT 5'& ||. || ||| |||.|.|| &5' ---GAGATC-ACCTGTGTCGTA 3' |
Aurka | mmu-miR-1893 | beg:430 | end:451 | pic:3' GCTCCGCAGGTCGCGGGCGCGG 5'& || ||||.. |||||.|| &5' --AGTCGTCTGAAGCCCGTGC- 3' |
Aurka | mmu-miR-1894-5p | beg:228 | end:244 | pic:3' TCTCCGTCCACCATCCCCTCTC 5'& |||| .||||.|.| &5' --------GTGG-GGGGGGGGG 3' |
Aurka | mmu-miR-1898 | beg:95 | end:114 | pic:3' CTAGGGGA-CACTTGGAACTGGA 5'& | || || |||||.|| &5' ---CAACTAGT---CCTTGGCC- 3' |
Aurka | mmu-miR-1907 | beg:127 | end:148 | pic:3' TGGAGG-TCTAGGAGACGACGAG 5'& || || ||| || |||||||. &5' -CC-CCAAGAACCA-TGCTGCTT 3' |
Aurka | mmu-miR-195 | beg:127 | end:147 | pic:3' CGGTTATAAAGACACGACGAT 5'& |||| ||||||| &5' -CCAAGAACCA--TGCTGCT- 3' |
Aurka | mmu-miR-1956 | beg:187 | end:211 | pic:3' AGGCGACT-GAGTCGGGACCTGA 5'& ||| || |||| ||||||.| &5' TCCCCTACCCTCA-CCCTGGGC- 3' |
Aurka | mmu-miR-1968 | beg:171 | end:191 | pic:3' TC-AGGTGGTAGGAATTGTCGACGT 5'& .| |||||. .||||||. &5' GGTTCCACT-------GCAGCTGT- 3' |
Aurka | mmu-miR-1970 | beg:386 | end:410 | pic:3' GTTTC-GGATAGGGG---TCACTGTGT 5'& || |.| |. |||||||| &5' ---AGACTTTGACTTTTAAGTGACAC- 3' |
Aurka | mmu-miR-1971 | beg:196 | end:217 | pic:3' AGAGTCGGG--TCGGAAATG 5'& |||| ||| .|||| |.| &5' -CTCA-CCCTGGGCCTGTGC 3' |
Aurka | mmu-miR-19a | beg:376 | end:399 | pic:3' AGTCAAAACGTATCT-AAACGTGT 5'& || |||||||||| |||| || &5' --AGATTTGCATAGACTTTG-AC- 3' |
Aurka | mmu-miR-19b | beg:377 | end:390 | pic:3' AGTCAAAACGTACCTAAACGTGT 5'& ||||||||.| &5' -------------GATTTGCATA 3' |
Aurka | mmu-miR-203star | beg:121 | end:141 | pic:3' ACAACTTGACAGTTCTTGGTGA 5'& ||| |||||||||. &5' ----GAAACCCCAAGAACCAT- 3' |
Aurka | mmu-miR-208a | beg:477 | end:497 | pic:3' TGTTCGAAAAAC-GAGCAGAATA 5'& .||| || ||.|||||. &5' --GAGCCTG-TGCCTTGTCTTG- 3' |
Aurka | mmu-miR-20bstar | beg:167 | end:187 | pic:3' GATCTTCACGAGTGTGACGTCA 5'& .|||| |.|| |||||||| &5' --GGAAG-GTTC-CACTGCAG- 3' |
Aurka | mmu-miR-211 | beg:163 | end:174 | pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& ..|||||| &5' --------------GGAGGGAA 3' |
Aurka | mmu-miR-2134 | beg:205 | end:224 | pic:3' CGTGGGGCAAAGGGTTCTG 5'& . ||.|| ||||||. &5' --GGCCTGTGCCCCAAGG- 3' |
Aurka | mmu-miR-2145 | beg:320 | end:344 | pic:3' TTGGTCCGGG---CTGGGACGA 5'& ||||||||. || |||.| &5' -ACCAGGCCTAGGGAAACTGTT 3' |
Aurka | mmu-miR-2146 | beg:416 | end:433 | pic:3' GTGTACCTTGGGAAGAGGTG 5'& || |. |.|||| &5' -----GGGTCTTGTTTCCA- 3' |
Aurka | mmu-miR-218-2star | beg:120 | end:142 | pic:3' GCGCCACGAACTGTCTTGGTAC 5'& || ||||||||| &5' ---GGAAACCCCAAGAACCATG 3' |
Aurka | mmu-miR-27a | beg:13 | end:36 | pic:3' CGCCT-TGAATCGGTGACACTT 5'& ||| || || |||||||. &5' -CGGCCACCGTGCAACTGTGAG 3' |
Aurka | mmu-miR-2861 | beg:317 | end:332 | pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.| |||||||. &5' ------GTCACCAGGCCT- 3' |
Aurka | mmu-miR-296-5p | beg:232 | end:247 | pic:3' TGTCCTAACTCCCCCCCGGGA 5'& |.|||||||.|. &5' --------GGGGGGGGGTCT- 3' |
Aurka | mmu-miR-297astar | beg:297 | end:311 | pic:3' ATACCCATACACACATACATAT 5'& ||||.|||||| &5' -----------GTGTGTGTATA 3' |
Aurka | mmu-miR-297b-3p | beg:297 | end:311 | pic:3' ATACCCATACACACATACATAT 5'& ||||.|||||| &5' -----------GTGTGTGTATA 3' |
Aurka | mmu-miR-297cstar | beg:297 | end:311 | pic:3' ATACCCATACACACATACATAT 5'& ||||.|||||| &5' -----------GTGTGTGTATA 3' |
Aurka | mmu-miR-30estar | beg:26 | end:52 | pic:3' CGACATT---TGTAGGCTGACTTTC 5'& ||||.| ||| || |.||||. &5' -CTGTGAGAAACACCCTATTGAAG- 3' |
Aurka | mmu-miR-322 | beg:127 | end:147 | pic:3' AGGTTTTGTACTTAACGACGAC 5'& ||||.| ||||||| &5' -CCAAGAACCA---TGCTGCT- 3' |
Aurka | mmu-miR-327 | beg:63 | end:85 | pic:3' TAGGAGTA-CG--GGGAGTTCA 5'& |||||| || ||||||.| &5' --CCTCATGGCTGCCCTCAGG- 3' |
Aurka | mmu-miR-327 | beg:270 | end:294 | pic:3' TAGGAGTACG-----GGGAGTTCA 5'& ||| .||. ||.|||||| &5' --CCT-GTGTCGTAGCCTTCAAGT 3' |
Aurka | mmu-miR-335-5p | beg:535 | end:559 | pic:3' TGTAAAAAG--CAATAACGAGAACT 5'& .||||||. |||. |.||| &5' -TATTTTTTATGTTGGAGTTCT--- 3' |
Aurka | mmu-miR-338-3p | beg:543 | end:554 | pic:3' GTTGTTTTAGTGACTACGACCT 5'& |||.|||| &5' --------------ATGTTGGA 3' |
Aurka | mmu-miR-338-3p | beg:166 | end:190 | pic:3' GTTGTTTTA--GTGACTACGACCT 5'& .. ||..| ||||| |||| &5' -GGGAAGGTTCCACTGCAGCTG-- 3' |
Aurka | mmu-miR-34a | beg:462 | end:487 | pic:3' TGTTGGT--CGAT-TCTGTGACGGT 5'& ||.||| |||| .|| |||. &5' -CAGCCACTGCTACGGAGCCTGT-- 3' |
Aurka | mmu-miR-351 | beg:64 | end:86 | pic:3' GTCCGAGTTTCCCGA--GGAGTCCCT 5'& |||| |||| |||||||| &5' ----CTCAT--GGCTGCCCTCAGGG- 3' |
Aurka | mmu-miR-380-5p | beg:454 | end:471 | pic:3' GCGTACAAGATACC----AGTTGGTA 5'& ||| |||.||| &5' -----------TGGATCCTCAGCCA- 3' |
Aurka | mmu-miR-421 | beg:325 | end:346 | pic:3' CGCGGGTTAATTACAGACAACTA 5'& |||.|. || ||||||. &5' --GCCTAGGGAAA--CTGTTGG- 3' |
Aurka | mmu-miR-423-3p | beg:76 | end:99 | pic:3' TGACTCCC-CGGAGTCTGGCTCGA 5'& || |||| ||||. .|.|||| &5' -CTCAGGGTGCCTT--GCTGAGC- 3' |
Aurka | mmu-miR-432 | beg:271 | end:293 | pic:3' GACGGGTGACTAGAT---GAGGTTCT 5'& || . .|| ||.|||| &5' ---CCTGT--GTCGTAGCCTTCAAG- 3' |
Aurka | mmu-miR-448 | beg:549 | end:572 | pic:3' TACCCTGTAGGA--TGTATACGTT 5'& ||| ||. |..||||||| &5' ---GGAGTTCTGTCATGTATGCAA 3' |
Aurka | mmu-miR-450b-3p | beg:416 | end:435 | pic:3' TACGTACGTTTTACAAGGGTTA 5'& | . ||||.|||.| &5' ------GGGTCTTGTTTCCAGT 3' |
Aurka | mmu-miR-466a-3p | beg:289 | end:311 | pic:3' AGAATACACACG----CACATACATAT 5'& |||| ||||.|||||| &5' --------GTGCCAGAGTGTGTGTATA 3' |
Aurka | mmu-miR-466b-3-3p | beg:289 | end:310 | pic:3' AGAATACACACG----CACATACATAA 5'& |||| ||||.||||| &5' --------GTGCCAGAGTGTGTGTAT- 3' |
Aurka | mmu-miR-466b-3p | beg:289 | end:311 | pic:3' AGAATACACACG----CACATACATAT 5'& |||| ||||.|||||| &5' --------GTGCCAGAGTGTGTGTATA 3' |
Aurka | mmu-miR-466c-3p | beg:289 | end:311 | pic:3' AGAATACACACG----CACATACATAT 5'& |||| ||||.|||||| &5' --------GTGCCAGAGTGTGTGTATA 3' |
Aurka | mmu-miR-466d-3p | beg:289 | end:311 | pic:3' GATACACACG----CACATACATAT 5'& |||| ||||.|||||| &5' ------GTGCCAGAGTGTGTGTATA 3' |
Aurka | mmu-miR-466e-3p | beg:289 | end:311 | pic:3' AGAATACACACG----CACATACATAT 5'& |||| ||||.|||||| &5' --------GTGCCAGAGTGTGTGTATA 3' |
Aurka | mmu-miR-466f-3p | beg:289 | end:310 | pic:3' CACACATACACACACACATAC 5'& ||| | |||||||||| &5' --GTGCCAGAGTGTGTGTAT- 3' |
Aurka | mmu-miR-466i | beg:289 | end:310 | pic:3' ATCACACATACACACACACATA 5'& ||| | |||||||||| &5' ----GTGCCAGAGTGTGTGTAT 3' |
Aurka | mmu-miR-467f | beg:289 | end:311 | pic:3' ACATCCACACACACACATATA 5'& ||. | ||||||||||| &5' -GTGCCAGAGTGTGTGTATA- 3' |
Aurka | mmu-miR-470 | beg:105 | end:127 | pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& .| .||| ||| ||||.||| &5' -TTGGCCA-TGCA--TCCAGGAA 3' |
Aurka | mmu-miR-493 | beg:383 | end:404 | pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& |||.| | | |||.||.| &5' ----GCATAGACTTTGACTTTTA 3' |
Aurka | mmu-miR-497 | beg:131 | end:147 | pic:3' ATGTTTGGTGTCACACGACGAC 5'& .||||| ||||||| &5' ---GAACCA-----TGCTGCT- 3' |
Aurka | mmu-miR-503 | beg:134 | end:147 | pic:3' GACGTCATGACAAGG-GCGACGAT 5'& || .|||||| &5' -------------CCATGCTGCT- 3' |
Aurka | mmu-miR-504 | beg:401 | end:425 | pic:3' CTATCTCAC-GTCT---GGTCCCAGA 5'& |||| || .|||||||| &5' -----AGTGACACCCATTCAGGGTCT 3' |
Aurka | mmu-miR-542-3p | beg:539 | end:564 | pic:3' AAAGT-CAATAGTTAGACAGTGT 5'& |||.| |||. |||||||. &5' TTTTATGTTGGAGTTCTGTCAT- 3' |
Aurka | mmu-miR-615-5p | beg:50 | end:70 | pic:3' CTAGGCTC-GTGGCC---CCTGGGGG 5'& | |||| ||||||.| &5' -------GCCACCCTCCTGGACCCTC 3' |
Aurka | mmu-miR-654-5p | beg:246 | end:266 | pic:3' TGTGTACAAGACGTC----GAATGGT 5'& ||| | ||||||| &5' ---------CTGTGGGAAACTTACCA 3' |
Aurka | mmu-miR-666-3p | beg:167 | end:189 | pic:3' TCGTCCG-CTAGTGCGACGTCGG 5'& .|| |.| | |||||||. &5' ---GGGAAGGTTCCACTGCAGCT 3' |
Aurka | mmu-miR-669d | beg:578 | end:597 | pic:3' TGTATATGTACGTGTGTGTTCA 5'& |||||.|||.|.|| || &5' --ATATATATGTATAC-CA--- 3' |
Aurka | mmu-miR-669h-5p | beg:554 | end:571 | pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& ||.| ||. .||||| &5' --------CTGT-CATGTATGCA- 3' |
Aurka | mmu-miR-669l | beg:578 | end:599 | pic:3' TGTATATGTACGTGTGTGTTGA 5'& |||||.|||.|.|| || || &5' --ATATATATGTATAC-CATCT 3' |
Aurka | mmu-miR-669m | beg:297 | end:311 | pic:3' TATACAAACACACCTACATATA 5'& ||||| |||||| &5' --------GTGTG--TGTATA- 3' |
Aurka | mmu-miR-688 | beg:206 | end:216 | pic:3' CTTATTCATCAGCGGACGCT 5'& |||||.| &5' ------------GCCTGTG- 3' |
Aurka | mmu-miR-688 | beg:475 | end:488 | pic:3' CTTATTCATCAGCGGACGCT 5'& | |||||.| &5' ---------GGAGCCTGTG- 3' |
Aurka | mmu-miR-690 | beg:272 | end:289 | pic:3' AAACCAACACTCGGATCGGAAA 5'& |||| | ||||||| &5' ------TGTGT-CGTAGCCTT- 3' |
Aurka | mmu-miR-691 | beg:108 | end:127 | pic:3' AAAAGACGGAGAGAA-GTCCTTA 5'& ||| | |||||| &5' ------GCCATGCATCCAGGAA- 3' |
Aurka | mmu-miR-703 | beg:498 | end:517 | pic:3' AAGAAAGGAA-GA-CTTCCAAAA 5'& ||| || |..||||| &5' ------CCTGACTCGGGGGTTT- 3' |
Aurka | mmu-miR-706 | beg:501 | end:521 | pic:3' AAAAAACTCTG---TCCCAAAGAGA 5'& ||| .||||||||.| &5' --------GACTCGGGGGTTTCTTT 3' |
Aurka | mmu-miR-707 | beg:59 | end:77 | pic:3' GCATCCGTTCGCCGTACTGAC 5'& || ||||.||| &5' ----GGACCCT--CATGGCTG 3' |
Aurka | mmu-miR-760 | beg:465 | end:484 | pic:3' AGGGGTGTCTGG-GTCTCGGC 5'& |||| .|. |.||||| &5' ---CCACT-GCTACGGAGCC- 3' |
Aurka | mmu-miR-878-3p | beg:546 | end:566 | pic:3' AGATGGGTCACACCACAGTACG 5'& . | || |||||||. &5' -----TTGGAGTTCTGTCATGT 3' |
Aurka | mmu-miR-9 | beg:248 | end:270 | pic:3' AGTATGTCGATCTAT---TGGTTTCT 5'& |. .|| ||||.||| &5' -------GTGGGAAACTTACCAGAGA 3' |
Aurka | mmu-miR-133astar | beg:249 | end:267 | pic:3' TAAACCAAGGTAAAATGGTCG 5'& ||| ||||||| &5' ---TGGGAAAC--TTACCAG- 3' |