SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3677280 | snp | G/T | 0.444444 | 0.157135 | utr-variant-5-prime, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94599358 | CAGCTGAAGGAGAAG[G/T]GGGGTAAGTAAGGAG | 18786 |
rs3725734 | snp | C/G | 0.5 | 0 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94594812 | TTGAGGGTGGCCTTC[C/G]AGGTTTCAAAAGCCA | 18786 |
rs13460736 | snp | A/C | | | synonymous-codon, upstream-variant-2KB | Plaa, Ift74 | GRCm38.p3 | 4:94602984 | GCTGAGCTGCTCGCT[A/C]CCGGGCCACGAACTG | 18786 |
rs13460737 | snp | C/T | | | synonymous-codon | Plaa | Mm_Celera | 4:94582575 | AAATGATTTGAATCC[C/T]ATGTTTCTGGATCAG | 18786 |
rs13460738 | snp | G/T | 0.260355 | 0.249785 | synonymous-codon, missense | Plaa | Mm_Celera | 4:94586321 | TTGCTGCGTACTGGA[G/T]AATGGTGACATTGTG | 18786 |
rs13460739 | snp | A/G | | | stop-gained, missense | Plaa | Mm_Celera | 4:94586336 | TCAGTCTATATGGTG[A/G]TGCTGCGTACTGGAA | 18786 |
rs28157342 | snp | C/T | 0.345679 | 0.230967 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94598264 | TCTGGAGGAAGCAGA[C/T]CACCAAGAAGAAAAG | 18786 |
rs28157343 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94598039 | AAAAACAAAACACCC[A/G]AGGCCAGGCCAGTAG | 18786 |
rs28157344 | snp | C/T | 0.32 | 0.24 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94598038 | AAAAAACAAAACACC[C/T]GAGGCCAGGCCAGTA | 18786 |
rs28157345 | snp | A/G | 0.497778 | 0.0332592 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94598008 | GGACATTTACATCAC[A/G]GTCCAAGATCATAAA | 18786 |
rs28157346 | snp | C/T | 0.375 | 0.216506 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94597871 | AGGGAGACAGCGGCC[C/T]TCTTCTGGCCCTCTT | 18786 |
rs28157347 | snp | G/T | 0.32 | 0.24 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94595957 | CAGCTGGAAGGTTTC[G/T]ATTCCCAGCTTTTCT | 18786 |
rs28157348 | snp | C/G | 0.32 | 0.24 | intron-variant | Gm12657, Plaa | GRCm38.p3 | 4:94595888 | TTTACACAAAGTCCT[C/G]TTAGACAAGAGTGTT | 18786 |
rs28157349 | snp | A/G | 0.32 | 0.24 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94595779 | GGAGGACCAACTGGA[A/G]TCCTCAGTCCTGCAC | 18786 |
rs28157350 | snp | A/G | 0.32 | 0.24 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94595751 | ACACTCAGCAGAGAG[A/G]AGTGAGATTTATGGA | 18786 |
rs28157351 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94595582 | AATAGCACCAAAAAA[A/C]CAGACCTTTGTAAGA | 18786 |
rs28157352 | snp | A/G | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94593625 | AGAGAATAAGCCAAG[A/G]GTCTGGGGTACAGTT | 18786 |
rs28157353 | snp | A/C | 0.260355 | 0.249785 | upstream-variant-2KB, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94593592 | TCAATATCCCACCCA[A/C]TAACAGGATGACAAC | 18786 |
rs28157354 | snp | C/T | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94593590 | CCTCAATATCCCACC[C/T]AATAACAGGATGACA | 18786 |
rs28157355 | snp | A/G | 0.32 | 0.24 | upstream-variant-2KB, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94593410 | AGCAAGTTGCAGGCT[A/G]GGTCACCCTAGGTTA | 18786 |
rs28157356 | snp | G/T | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94593386 | ATGTTGATATATGCC[G/T]GTGATTCCAGCAAGT | 18786 |
rs28157357 | snp | A/G | 0.32 | 0.24 | upstream-variant-2KB, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94592801 | TTTTCCATATGAAAT[A/G]AATTCAGAGTCAGGC | 18786 |
rs28157358 | snp | A/C | 0.32 | 0.24 | upstream-variant-2KB, intron-variant | Gm12657, Plaa | GRCm38.p3 | 4:94592431 | CACAAACCTTATTCA[A/C]GATACCAGGCAAATT | 18786 |
rs28157359 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Plaa | Mm_Celera | 4:94591613 | AGAGGCTGTCTCAAA[A/G]TACAAACGGCCTTAA | 18786 |
rs28157360 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Plaa | Mm_Celera | 4:94591596 | GCTTTGGCTACACAG[A/G]TAGAGGCTGTCTCAA | 18786 |
rs28157361 | snp | C/T | 0.32 | 0.24 | intron-variant | Plaa | Mm_Celera | 4:94590383 | CACCACTTTTCTACT[C/T]ATCAGGTATTGCTGC | 18786 |
rs28157362 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Plaa | Mm_Celera | 4:94590104 | TCATTAATACAAACA[C/T]ACTTGGCCCCTGGCT | 18786 |
rs28157363 | snp | A/G | 0.489796 | 0.070696 | intron-variant | Plaa | Mm_Celera | 4:94588908 | TCAAGAGCCCATAAA[A/G]AAAGATTATTTGTTG | 18786 |
rs28157364 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Plaa | Mm_Celera | 4:94588899 | GTACACATTTCAAGA[A/G]CCCATAAAGAAAGAT | 18786 |
rs28157365 | snp | C/T | 0.35503 | 0.226867 | intron-variant | Plaa | Mm_Celera | 4:94588785 | ATTAATGCATACAAA[C/T]CACTTGTTTTTTCAC | 18786 |
rs28157366 | snp | A/C | 0.32 | 0.24 | intron-variant | Plaa | Mm_Celera | 4:94588702 | CAGCAGTCGAGGAAC[A/C]ACACCCAAGGCTGTC | 18786 |
rs28157367 | snp | A/G | 0.152778 | 0.230321 | intron-variant | Plaa | Mm_Celera | 4:94587716 | ATAGAGCTCTACTCA[A/G]TGGAACTGCAAGAGA | 18786 |
rs28157368 | snp | G/T | 0.46875 | 0.121031 | intron-variant | Plaa | GRCm38.p3 | 4:94587691 | GTCTGTGAAGTGATG[G/T]TTTTAGCCAATAGAG | 18786 |
rs28157369 | snp | C/T | 0.46281 | 0.131194 | intron-variant | Plaa | Mm_Celera | 4:94587475 | TCTAAAATATTCACA[C/T]AAAAACAATACCTGT | 18786 |
rs28157370 | snp | C/T | 0.336735 | 0.234472 | intron-variant | Plaa | Mm_Celera | 4:94587135 | TTACATGCATTACAA[C/T]ACACACAAAATCAGA | 18786 |
rs28157371 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Plaa | Mm_Celera | 4:94586985 | CTCTGCAGCTTATTA[A/G]CACCATAAAACTTGT | 18786 |
rs28157372 | snp | A/T | 0.260355 | 0.249785 | synonymous-codon | Plaa | Mm_Celera | 4:94586393 | TTCACCATGTTTCCA[A/T]ATTCTTAGAGATCTG | 18786 |
rs28157373 | snp | A/T | 0.132653 | 0.220748 | intron-variant | Plaa | GRCm38.p3 | 4:94585956 | ATCTTACTCCAGTAC[A/T]TCCCTAATCTAAACA | 18786 |
rs28157374 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Plaa | Mm_Celera | 4:94585794 | ATCCATTAGTGTTGT[A/G]AGGTCAGTGTTACCT | 18786 |
rs28157375 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Plaa | Mm_Celera | 4:94585329 | ACTGGCTAGTCTTCC[A/G]TCTCTCTTCTACACT | 18786 |
rs28157376 | snp | C/T | 0.336735 | 0.234472 | intron-variant | Plaa | Mm_Celera | 4:94585181 | CATTCTCGGACCACT[C/T]AGCATTCTATGACAC | 18786 |
rs28157377 | snp | A/T | 0.260355 | 0.249785 | intron-variant | Plaa | Mm_Celera | 4:94585034 | TCTGTTCCCAATGTC[A/T]AGTTTACAATCTCTT | 18786 |
rs28157378 | snp | G/T | 0.244898 | 0.249948 | intron-variant | Plaa | Mm_Celera | 4:94584972 | TGCCACAACCATAAA[G/T]AAGAGGTCTACCAAA | 18786 |
rs28157379 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Plaa | Mm_Celera | 4:94583717 | AGGACTAATCCTCAA[A/G]TATCAGTACCTGGCA | 18786 |
rs28157380 | snp | A/G | 0.5 | 0 | intron-variant | Plaa | GRCm38.p3 | 4:94582904 | TAGTTGTTTCATTAC[A/G]AATGGGGCAGGTGAT | 18786 |
rs28157381 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Plaa | Mm_Celera | 4:94582887 | TGCATGTGCTGCAAA[A/G]TTAGTTGTTTCATTA | 18786 |
rs28157382 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Plaa | Mm_Celera | 4:94582398 | ACATGATATTGATTA[A/G]TATCTCCACTAAAAC | 18786 |
rs28157383 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Plaa | Mm_Celera | 4:94582337 | GATGAGAAAAATTGG[C/T]TAGGGCTGGGTTATA | 18786 |
rs28157384 | snp | C/T | 0.260355 | 0.249785 | intron-variant | Plaa | Mm_Celera | 4:94582206 | TCTGGGCAGAGTGTA[C/T]TGTAATTGTTTCTGT | 18786 |
rs28157385 | snp | A/T | 0.132653 | 0.220748 | intron-variant | Plaa | Mm_Celera | 4:94580891 | TACAGGCAACGGAAT[A/T]CAAATCACATGTTCA | 18786 |
rs28157386 | snp | G/T | 0.260355 | 0.249785 | intron-variant | Plaa | Mm_Celera | 4:94580451 | TGGCTACTAGAATGT[G/T]CAAGGCCTTCCCTGA | 18786 |
rs28157387 | snp | A/C | 0.132653 | 0.220748 | intron-variant | Plaa | Mm_Celera | 4:94578376 | TCATATTAATGAAAA[A/C]TGCATCCCACCTGTG | 18786 |
rs28157388 | snp | A/G | 0.260355 | 0.249785 | intron-variant | Plaa | Mm_Celera | 4:94577009 | AACCACTTGCATTTC[A/G]GTGATCACATTATTC | 18786 |
rs28157389 | snp | C/T | 0.492188 | 0.0620098 | intron-variant | Plaa | Mm_Celera | 4:94576706 | TGGTAATGATGGACC[C/T]AGAAGTTCTCCTGAT | 18786 |
rs28157390 | snp | C/T | 0.396694 | 0.202437 | intron-variant | Plaa | Mm_Celera | 4:94576459 | GGTAGGATACTGCCA[C/T]TTTGATGTTCTTGTT | 18786 |
rs28157391 | snp | A/G | 0.375 | 0.216506 | intron-variant | Plaa | Mm_Celera | 4:94575861 | CTTAAACATGTGTCT[A/G]GGATGCTCTGACAAC | 18786 |
rs28157392 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Plaa | Mm_Celera | 4:94573609 | TTTGTACAAAGCTTC[C/T]TAGAATCCATTAAGG | 18786 |
rs28157393 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Plaa | GRCm38.p3 | 4:94573559 | AGCTTGAGGGCAGGA[C/T]TTTCATTGTTTTATT | 18786 |
rs28157394 | snp | C/T | 0.489796 | 0.070696 | intron-variant | Plaa | Mm_Celera | 4:94572729 | TTAAACTCTTCCTGC[C/T]TCACCTCCTAAATGC | 18786 |
rs28157395 | snp | C/T | 0.5 | 0 | intron-variant | Plaa | Mm_Celera | 4:94571590 | CTAGTGATGTGGCAA[C/T]GCCTTTCTGTGCAAC | 18786 |
rs28157396 | snp | A/G | 0.5 | 0 | intron-variant | Plaa | GRCm38.p3 | 4:94570848 | CGAGTCTAAGAAAAT[A/G]GGACATTACGTGCTT | 18786 |
rs28157397 | snp | G/T | 0.48 | 0.0979796 | utr-variant-3-prime | Plaa | Mm_Celera | 4:94565790 | TATAGCTTTAAGTCC[G/T]TAGAGGGTCACTGAA | 18786 |
rs28157398 | snp | C/T | 0.244898 | 0.249948 | utr-variant-3-prime | Plaa | Mm_Celera | 4:94565760 | AGAGATTTAACTCCA[C/T]GTCAAGGAGCACTGT | 18786 |
rs31768758 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Plaa | Mm_Celera | 4:94586104 | CTCTATTTTTTCTAA[C/T]TTCTTTGGTATTCAG | 18786 |
rs31775835 | snp | C/T | 0.375 | 0.216506 | utr-variant-3-prime | Plaa | GRCm38.p3 | 4:94566771 | GGGACATCACGTATG[C/T]CTGTAGTTGAATGTA | 18786 |
rs31782919 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94598354 | ACCACAAACCAGAAT[A/G]TAAGTTCAAGTCAAC | 18786 |
rs31922259 | snp | C/T | 0.5 | 0 | upstream-variant-2KB, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94591966 | GAATGCCTAAAAACA[C/T]GAGTTCAATCACACA | 18786 |
rs31947601 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Plaa | Mm_Celera | 4:94581546 | TTTTATTTAATTTAT[C/T]GGGAGGTTATTTTTA | 18786 |
rs31948799 | snp | A/T | 0.375 | 0.216506 | downstream-variant-500B, intron-variant | Gm12657, Plaa | GRCm38.p3 | 4:94600468 | GGTAACACTAATTTC[A/T]AATGTTCCCTAGCAG | 18786 |
rs31984987 | snp | A/G | 0.375 | 0.216506 | intron-variant | Plaa | Mm_Celera | 4:94588755 | ATTGTTTAGTGGGGG[A/G]AAAAAAATCAGCAAA | 18786 |
rs32052265 | snp | A/G | 0.444444 | 0.157135 | upstream-variant-2KB, intron-variant | Plaa, Ift74 | GRCm38.p3 | 4:94604992 | ACATATTTGTATAGC[A/G]ATCATTTCTGCAAGA | 18786 |
rs32129015 | snp | A/C | 0.444444 | 0.157135 | intron-variant, upstream-variant-2KB | Plaa, Ift74 | Mm_Celera | 4:94601876 | CTAATAAGAGATATC[A/C]GCTTCAACACACACA | 18786 |
rs32140173 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94598353 | AACCACAAACCAGAA[C/T]GTAAGTTCAAGTCAA | 18786 |
rs32161906 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Plaa | Mm_Celera | 4:94576412 | AAAAACCTTTATATG[C/T]ATTATGCCACTTAAT | 18786 |
rs32171757 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Plaa | Mm_Celera | 4:94584525 | TGGGCATTGGGGAAC[A/G]TACAATGAGCCTGAG | 18786 |
rs32203925 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Plaa | Mm_Celera | 4:94582773 | ATATAGCATAATATA[G/T]ATGGTATGCGGTCTT | 18786 |
rs32223811 | snp | C/G | 0.375 | 0.216506 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94599329 | TGCCACAGCCGCTCT[C/G]CAACGCCGAGCTCCA | 18786 |
rs32270190 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94593832 | TTAAAACACAACCAC[C/T]ATATGATCTAGCAAT | 18786 |
rs32289827 | snp | C/T | 0.5 | 0 | intron-variant, upstream-variant-2KB | Plaa, Ift74 | Mm_Celera | 4:94602661 | AGTTAGGACAGCCAG[C/T]CAGGTCCTCCAATCC | 18786 |
rs32319507 | snp | A/G | 0.5 | 0 | upstream-variant-2KB, intron-variant | Plaa, Ift74 | GRCm38.p3 | 4:94604265 | TTATTTCATGAATGT[A/G]GGTATACTGTCGCTG | 18786 |
rs32346354 | snp | C/T | 0.444444 | 0.157135 | upstream-variant-2KB, utr-variant-5-prime, intron-variant | Plaa, Ift74 | Mm_Celera | 4:94603883 | TAGCTCGGGCTAGCC[C/T]AAAACTCGTGGTTCC | 18786 |
rs32350043 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94595702 | TCTTTTCTTCCCCCC[A/G]CCACAGCTCTCATCC | 18786 |
rs32366988 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Plaa | Mm_Celera | 4:94576808 | TAATTATGGAATTCT[G/T]CTGGACTGAATTTCA | 18786 |
rs32385670 | snp | A/G | 0.375 | 0.216506 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94598748 | TAGCAAGACAGAAAA[A/G]AAAATGTTTTCAAAC | 18786 |
rs32394650 | snp | A/G/T | 0.375 | 0.216506 | utr-variant-3-prime, intron-variant | Gm12657, Plaa | GRCm38.p3 | 4:94600312 | TAAACTATATATATA[A/G/T]AAAAAGATAAATACA | 18786 |
rs32410460 | snp | G/T | 0.5 | 0 | utr-variant-3-prime | Plaa | Mm_Celera | 4:94568700 | AATGAAGTTACCTCA[G/T]ATAGTGAAAGAAACT | 18786 |
rs32423243 | snp | A/T | 0.375 | 0.216506 | intron-variant | Plaa | Mm_Celera | 4:94586571 | AAATCATGTTTTTAT[A/T]CATTTCACATCATAC | 18786 |
rs32449465 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Plaa | GRCm38.p3 | 4:94591177 | ATCCAGCCTACTGAA[A/G]CTAATTTTACTCAAT | 18786 |
rs32466164 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Plaa | GRCm38.p3 | 4:94585607 | GGGATTAAAGGCGTT[C/T]GCCACCATTGCCTGG | 18786 |
rs32509163 | snp | C/T | 0.375 | 0.216506 | intron-variant | Plaa | Mm_Celera | 4:94589393 | CATATTTATTTAGAA[C/T]TCACTCTAAAATACC | 18786 |
rs32557257 | snp | C/T | 0.375 | 0.216506 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94599347 | ACGCCGAGCTCCAGC[C/T]GAAGGAGAAGTGGGG | 18786 |
rs32586086 | snp | C/T | 0.5 | 0 | upstream-variant-2KB, intron-variant | Plaa, Ift74 | GRCm38.p3 | 4:94604826 | CATATACACATACCC[C/T]TCAACAAGCACACAC | 18786 |
rs32589756 | snp | A/G | 0.444444 | 0.157135 | upstream-variant-2KB, utr-variant-5-prime, intron-variant | Plaa, Ift74 | GRCm38.p3 | 4:94603585 | TTGCTTGTTTGCCTT[A/G]CGCCACGATTTGTTT | 18786 |
rs32706270 | snp | A/G | 0.5 | 0 | intron-variant | Gm12657, Plaa | GRCm38.p3 | 4:94599324 | TGCCGTGCCACAGCC[A/G]CTCTGCAACGCCGAG | 18786 |
rs32731005 | snp | C/T | 0.375 | 0.216506 | utr-variant-3-prime, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94600209 | CATCCATTCACTATA[C/T]TTTTCTGAGTTGTCC | 18786 |
rs32736647 | snp | C/T | 0.5 | 0 | intron-variant | Gm12657, Plaa | Mm_Celera | 4:94597370 | TGCCCAAGAGAGGTA[C/T]TGCGGGATCCTCCGG | 18786 |
rs32746192 | snp | C/G | 0.444444 | 0.157135 | upstream-variant-2KB, intron-variant | Plaa, Ift74 | GRCm38.p3 | 4:94604073 | ACAAACCTTTGTTAA[C/G]TTGCCAAATCCAATT | 18786 |
rs32799260 | snp | A/G | 0.375 | 0.216506 | intron-variant | Plaa | Mm_Celera | 4:94574881 | ATAATATTTAGTGGA[A/G]TAAAATGACTTTAAA | 18786 |
rs32806130 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Plaa | Mm_Celera | 4:94586031 | CAGAAATTCTAATTT[C/T]CATTATTCAACTTTG | 18786 |
rs32868975 | snp | C/T | 0.375 | 0.216506 | upstream-variant-2KB, intron-variant | Gm12657, Plaa | Mm_Celera | 4:94591723 | AAAAAGATCTAAGTG[C/T]ACACATCAAGTATAC | 18786 |