DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT581376 mmu-miR-139-5p Mus musculus Rchy1 68098 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581378 mmu-miR-759 Mus musculus Rchy1 68098 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581374 mmu-miR-1195 Mus musculus Rchy1 68098 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581372 mmu-miR-1199-5p Mus musculus Rchy1 68098 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581377 mmu-miR-3082-5p Mus musculus Rchy1 68098 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581373 mmu-miR-3089-5p Mus musculus Rchy1 68098 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT581375 mmu-miR-5135 Mus musculus Rchy1 68098 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000129 mmu-miR-30a* 68098 Rchy1 cgacguUUGUAGGCUGACUUUc :| ||: ||||||| acuaauGAAAUUGUACUGAAAu 2 17 718 739 [mm9:5:92378023-92378044:-] 0.6023 148 7 -8.13 -1.0726 MIMAT0004527 mmu-miR-124* 68098 Rchy1 uagUUCCAG-G-CGACACUUGUGc ::|||| | || |||||||| cagGGGGUCACAGC-GUGAACACc 2 20 108 130 [mm9:5:92378632-92378654:-] 0.6455 155 7 -22.89 -0.1328 MIMAT0000137 mmu-miR-126-5p 68098 Rchy1 gcgcaUGGUUUUCAUUAUUac |:: | ||||||| auacaAUUUUAUGUAAUAAau 3 17 696 716 [mm9:5:92378046-92378066:-] 0.6023 128 0 -4.53 -0.1084 MIMAT0000249 mmu-miR-30e* 68098 Rchy1 cgacAUUUGUAGGCUGACUUUc |:|| ||: ||||||| cuaaUGAA-AUUGUACUGAAAu 2 19 719 739 [mm9:5:92378023-92378043:-] 0.6023 152 7 -8.63 -1.0726 MIMAT0000367 mmu-miR-291a-5p 68098 Rchy1 ucucucccgGAGGUGAAACUAc || ||||||| caauuuuaaCUAGUCUUUGAUu 2 14 370 391 [mm9:5:92378371-92378392:-] 0.7175 141 7 -9.28 -1.2467 MIMAT0000367 mmu-miR-291a-5p 68098 Rchy1 ucUCUCCCGGAGGUGAAACUac ||| ::||| |||||| aaAGACAUUUUCC-CUUUGA-- 3 21 814 832 [mm9:5:92377930-92377948:-] 0.6023 134 0 -13.07 -0.2718 MIMAT0000376 mmu-miR-298 68098 Rchy1 ccCUUCUUGUCGGGAGGAGACGg ||| | | |||: ||||||| caGAA-AUCUGCCUGCCUCUGCc 2 22 593 614 [mm9:5:92378148-92378169:-] 0.5000 163 7 -27.52 -0.1723 MIMAT0004579 mmu-miR-302a* 68098 Rchy1 cguuCAUGUUGGUGCAAAUUCa |||| :: |: |||||| ggcuGUACUGUGAUUUUUAAGu 2 19 397 418 [mm9:5:92378344-92378365:-] 0.6133 130 6 -11.59 -0.1234 MIMAT0004580 mmu-miR-34c* 68098 Rchy1 ggaccgacacaccaaUCACUAa |||||| uuucauggaacuuuaAGUGAUa 2 8 304 325 [mm9:5:92378437-92378458:-] 0.6913 120 6 -8.27 -0.2296 MIMAT0004581 mmu-miR-34b-3p 68098 Rchy1 cuaccgucaccucaaUCACUAa |||||| uuucauggaacuuuaAGUGAUa 2 8 304 325 [mm9:5:92378437-92378458:-] 0.6913 120 6 -10.16 -0.2275 MIMAT0004617 mmu-miR-148a* 68098 Rchy1 ucagccUCACAGAGUCUUGAAa | | || ::|||||| uuuuauAUUUUCAUGGAACUUu 2 17 296 317 [mm9:5:92378445-92378466:-] 0.6455 136 6 -8.39 -0.1311 MIMAT0004617 mmu-miR-148a* 68098 Rchy1 ucagccucacagaGUCUUGAaa :|||||| uucuuguucuugaUAGAACUac 3 10 345 366 [mm9:5:92378396-92378417:-] 0.7371 121 0 -7.96 -0.1515 MIMAT0004622 mmu-let-7c-1* 68098 Rchy1 ccuuucGAU--CUUCCAACAUGuc ||| ||| |||||| aaauuaCUAAUGAA-AUUGUACug 3 17 713 735 [mm9:5:92378027-92378049:-] 0.6023 125 0 -9.19 -0.2274 MIMAT0004625 mmu-miR-16* 68098 Rchy1 agucguCGUGUCAGUUAUGACc |:|| | ||||||| gaaauuGUACUG-AAAUACUGu 2 17 724 744 [mm9:5:92378018-92378038:-] 0.6023 146 7 -10.55 -1.1110 MIMAT0004625 mmu-miR-16* 68098 Rchy1 agUC-GUCGUGUCAGUUAUGAcc || |||: | | |||||| uaAGACAGUCCUUUGAAUACUau 3 21 672 694 [mm9:5:92378068-92378090:-] 0.6023 135 0 -11.59 -0.1214 MIMAT0004629 mmu-miR-22* 68098 Rchy1 auuucGAACGGUGACU-UCUUGa ||||:: :||| ||||| aauuuCUUGUUCUUGAUAGAACu 2 18 342 364 [mm9:5:92378398-92378420:-] 0.7371 129 0 -17.25 -1.1178 MIMAT0004630 mmu-miR-26b* 68098 Rchy1 cucgguucauuACCUCUUGUCc | |||||||| cuguccuuggcUAGAGAACAGc 2 12 6 27 [mm9:5:92378735-92378756:-] 0.4978 147 7 -14.78 -0.2795 MIMAT0000544 mmu-miR-129-3p 68098 Rchy1 uacgAAAAAC-CCCAUUCCCGAa | |||| |||||||| cuagUCUUUGAUUUUAAGGGCUg 2 19 379 401 [mm9:5:92378361-92378383:-] 0.6978 149 7 -14.48 -1.2331 MIMAT0004663 mmu-miR-200c* 68098 Rchy1 gguuugugacgacccAUUCUGc |||||| ugcuuuuuaauuuucUAAGACa 2 8 657 678 [mm9:5:92378084-92378105:-] 0.6023 120 6 -7.34 -0.1187 MIMAT0000745 mmu-miR-380-3p 68098 Rchy1 uuCUACACCUGGUAUGAUGUAu | | | ||: : ||||||| uuGUUCUUGAUAGAACUACAUu 2 21 348 369 [mm9:5:92378393-92378414:-] 0.7371 152 7 -9.40 -1.2134 MIMAT0002106 mmu-miR-465a-5p 68098 Rchy1 agUGUAGUCACGGUA---AGAUUUAu |:|| ||| ||| || |||| agAUAU-AGUCACAUUCAUCGAAAUa 2 22 271 295 [mm9:5:92378467-92378491:-] 0.6455 122 0 -10.26 -0.1289 MIMAT0002107 mmu-miR-466a-3p 68098 Rchy1 agaauacacacgcACAUACAUau | |||||| acuauaauacaauUUUAUGUAau 3 11 690 712 [mm9:5:92378050-92378072:-] 0.6023 122 0 -3.77 -0.2538 MIMAT0002889 mmu-miR-532-5p 68098 Rchy1 ugcCAGGAU-GUGAGUUCCGUAc || ||| |:| ||||||| caaGUGCUAGGAUUAAAGGCAUg 2 20 618 640 [mm9:5:92378122-92378144:-] 0.5000 158 7 -19.41 -0.2399 MIMAT0003166 mmu-miR-546 68098 Rchy1 cugagGCACGGUGGUa :||||||||| aggcaUGUGCCACCAc 2 12 634 649 [mm9:5:92378113-92378128:-] 0.5000 151 7 -21.32 -0.1504 MIMAT0004790 mmu-miR-503* 68098 Rchy1 gguccgucaccuuugUUAUGAg |||||| uaagacaguccuuugAAUACUa 2 8 672 693 [mm9:5:92378069-92378090:-] 0.6023 120 6 -9.89 -0.3951 MIMAT0003189 mmu-miR-291b-5p 68098 Rchy1 ccucucccgGAGGUGAAACUAg || ||||||| caauuuuaaCUAGUCUUUGAUu 2 14 370 391 [mm9:5:92378371-92378392:-] 0.7175 141 7 -13.02 -1.2467 MIMAT0003189 mmu-miR-291b-5p 68098 Rchy1 ccUCUCCCGGAGGUGAAACUag ||| ::||| |||||| aaAGACAUUUUCC-CUUUGA-- 3 21 814 832 [mm9:5:92377930-92377948:-] 0.6023 134 0 -13.07 -0.2718 MIMAT0003728 mmu-miR-374* 68098 Rchy1 gaGCCUGUUACUAUUAUGUUGg :| |:| | |||||||||: uuUGAAUACU-AUAAUACAAUu 2 21 683 703 [mm9:5:92378059-92378079:-] 0.6023 146 0 -11.34 -0.2295 MIMAT0003897 mmu-miR-759 68098 Rchy1 caguuuuaacaaacGUGAGACg ||||||| gcugaccuggagcuCACUCUGu 2 9 550 571 [mm9:5:92378191-92378212:-] 0.5000 140 7 -12.38 -0.1861 MIMAT0003740 mmu-miR-674 68098 Rchy1 auGUGGUGAGGGUAGAG-UCACg ::|| || || |||| |||| ccUGCCUCUGCC-UCUCAAGUGc 2 21 603 624 [mm9:5:92378138-92378159:-] 0.5000 126 0 -23.17 -0.2346 MIMAT0003455 mmu-miR-679 68098 Rchy1 ugguucucaguggagUGUCAGg |||||| uuuuaauuuucuaagACAGUCc 2 8 661 682 [mm9:5:92378080-92378101:-] 0.6023 120 6 -14.13 -0.1611 MIMAT0003470 mmu-miR-691 68098 Rchy1 aaAAGACGGAGAGAAGU-CCUUa | :| : | |:|||| |||| aaUAUUUUAUAUUUUCAUGGAAc 2 21 292 314 [mm9:5:92378448-92378470:-] 0.6455 120 0 -8.54 -1.1666 MIMAT0003474 mmu-miR-694 68098 Rchy1 gaaguccguUGUAAAAGUc |:||||||| aaauauuuuAUAUUUUCAu 2 11 291 309 [mm9:5:92378453-92378471:-] 0.6455 146 7 -6.02 -1.1930 MIMAT0003480 mmu-miR-297b-5p 68098 Rchy1 uguACAAGUA-CGUG-UGUAUGUa | || || | || |||| || uguUCUUGAUAGAACUACAUUCAa 2 20 349 372 [mm9:5:92378390-92378413:-] 0.7371 121 0 -9.65 -0.1002 MIMAT0004827 mmu-miR-297b-3p 68098 Rchy1 auacccauacacACAUACAUau | |||||| cuauaauacaauUUUAUGUAau 3 11 691 712 [mm9:5:92378050-92378071:-] 0.6023 122 0 -2.68 -0.2472 MIMAT0003487 mmu-miR-697 68098 Rchy1 agAGGU-GUCCUGGUC-CUACAa |:|| | | |:||| ||||| cgUUCAUCUGCAUCAGAGAUGUu 2 20 68 90 [mm9:5:92378672-92378694:-] 0.6611 126 0 -17.66 -0.5831 MIMAT0003499 mmu-miR-709 68098 Rchy1 agGA-GGACGGAGACGGAGg || |||||||||||||| auCUGCCUGCCUCUGCCUCu 2 18 598 617 [mm9:5:92378145-92378164:-] 0.5000 176 7 -36.12 -0.2251 MIMAT0003504 mmu-miR-713 68098 Rchy1 cgacACACGGA-AG-UCACGu | ||||| || ||||| ugccUCUGCCUCUCAAGUGCu 2 16 605 625 [mm9:5:92378137-92378157:-] 0.5000 122 0 -14.87 -0.2572 MIMAT0003508 mmu-miR-501-5p 68098 Rchy1 aaagugGGUCCCUGUUUCC-UAa |:||| :||||| || caagugCUAGGAUUAAAGGCAUg 2 17 618 640 [mm9:5:92378122-92378144:-] 0.5000 120 0 -15.02 -0.1836 MIMAT0004238 mmu-miR-743a 68098 Rchy1 agaugagucgaaccaCAGAAAg |||||| auucaauuuuaacuaGUCUUUg 2 8 367 388 [mm9:5:92378374-92378395:-] 0.7175 120 6 -7.87 -0.2845 MIMAT0004840 mmu-miR-743b-3p 68098 Rchy1 agauaagucguacuaCAGAAAg |||||| auucaauuuuaacuaGUCUUUg 2 8 367 388 [mm9:5:92378374-92378395:-] 0.7175 120 6 -5.38 -0.2869 MIMAT0004842 mmu-miR-879 68098 Rchy1 ccgAAU-CUCGAUAUUCGGAGa ||| :| |: ||||||| cgaUUACUGGGUG-AAGCCUCu 2 19 189 209 [mm9:5:92378553-92378573:-] 0.6455 143 7 -17.20 -0.3369 MIMAT0004845 mmu-miR-881* 68098 Rchy1 ucuacacuGACAAUAGAGAGAc || || ||||||| uuucuuuuCUUUUCUCUCUCUc 2 15 453 474 [mm9:5:92378288-92378309:-] 0.5142 154 7 -10.36 -0.5697 MIMAT0004845 mmu-miR-881* 68098 Rchy1 ucuACACUGACA-AUAGAGAGAc | | || | | ||||||| cucUCUCUCUCUCUCUCUCUCUc 2 20 468 490 [mm9:5:92378272-92378294:-] 0.4994 146 7 -8.75 -0.3383 MIMAT0004845 mmu-miR-881* 68098 Rchy1 ucuACACUGACA-AUAGAGAGAc | | || | | ||||||| cucUCUCUCUCUCUCUCUCUCUc 2 20 484 506 [mm9:5:92378256-92378278:-] 0.4994 146 7 -8.75 -0.3077 MIMAT0004864 mmu-miR-297a* 68098 Rchy1 auacccauacacACAUACAUau | |||||| cuauaauacaauUUUAUGUAau 3 11 691 712 [mm9:5:92378050-92378071:-] 0.6023 122 0 -2.68 -0.2472 MIMAT0004866 mmu-miR-297c* 68098 Rchy1 auacccauacacACAUACAUau | |||||| cuauaauacaauUUUAUGUAau 3 11 691 712 [mm9:5:92378050-92378071:-] 0.6023 122 0 -2.68 -0.2472 MIMAT0004871 mmu-miR-465b-5p 68098 Rchy1 gucUAGUCGUGGUAAGAUUUAu :||| ||:: || |||| auaGUCA-CAUUCAUCGAAAUa 2 20 275 295 [mm9:5:92378467-92378487:-] 0.6455 121 0 -9.92 -0.1301 MIMAT0004876 mmu-miR-466b-3p 68098 Rchy1 agaauacacacgcACAUACAUau | |||||| acuauaauacaauUUUAUGUAau 3 11 690 712 [mm9:5:92378050-92378072:-] 0.6023 122 0 -3.77 -0.2538 MIMAT0005453 mmu-miR-466b-3-3p 68098 Rchy1 agaauacacacgcACAUACAUaa | |||||| acuauaauacaauUUUAUGUAau 3 11 690 712 [mm9:5:92378050-92378072:-] 0.6023 122 0 -3.77 -0.2538 MIMAT0004878 mmu-miR-466c-3p 68098 Rchy1 agaauacacacgcACAUACAUau | |||||| acuauaauacaauUUUAUGUAau 3 11 690 712 [mm9:5:92378050-92378072:-] 0.6023 122 0 -3.77 -0.2538 MIMAT0004880 mmu-miR-466e-3p 68098 Rchy1 agaauacacacgcACAUACAUau | |||||| acuauaauacaauUUUAUGUAau 3 11 690 712 [mm9:5:92378050-92378072:-] 0.6023 122 0 -3.77 -0.2538 MIMAT0004892 mmu-miR-568 68098 Rchy1 cacACAUAUGUAAAUAUGUa || |||| | ||||| cuuUGAAUACUAUAAUACAa 2 18 682 701 [mm9:5:92378061-92378080:-] 0.6023 129 0 -5.92 -0.1079 MIMAT0004894 mmu-miR-574-3p 68098 Rchy1 acACCCAC-ACACGUACUCGCAc |||||| | : ||||||| acUGGGUGAAGCCUCUGAGCGUg 2 21 194 216 [mm9:5:92378546-92378568:-] 0.6455 155 7 -25.73 -0.3538 MIMAT0004898 mmu-miR-654-3p 68098 Rchy1 uuccacuaccagucgUCUGUAu |||||| gccaucauauauaaaAGACAUu 2 8 801 822 [mm9:5:92377940-92377961:-] 0.6023 120 6 -7.23 -0.1999 MIMAT0004931 mmu-miR-466d-3p 68098 Rchy1 gauacacacgcACAUACAUau | |||||| uauaauacaauUUUAUGUAau 3 11 692 712 [mm9:5:92378050-92378070:-] 0.6023 122 0 -2.68 -0.2538 MIMAT0004938 mmu-miR-875-3p 68098 Rchy1 guAUCGGAGUCAUAAAAGUcc || ::|:| |||||||| aaUA-UUUUA-UAUUUUCAug 3 20 292 310 [mm9:5:92378452-92378470:-] 0.6455 135 0 -9.89 -0.1212 MIMAT0004861 mmu-miR-877 68098 Rchy1 gggacgcgguagaGGAGAUg |||||| cagacuuuuuuucCCUCUAg 2 8 749 768 [mm9:5:92377994-92378013:-] 0.6023 120 6 -10.51 -0.1546 MIMAT0004940 mmu-miR-511 68098 Rchy1 acUCACG-UCUCGUUUUCCGUa ||||| ||: : ||||||| caAGUGCUAGGAUUAAAGGCAu 2 20 618 639 [mm9:5:92378123-92378144:-] 0.5000 162 7 -20.66 -0.2415 MIMAT0005834 mmu-miR-466i 68098 Rchy1 aucacacAUACACACACACAUa | || | ||||||| ugaagccUCUGAGCGUGUGUAg 2 16 200 221 [mm9:5:92378541-92378562:-] 0.6455 151 7 -9.62 -0.4947 MIMAT0005838 mmu-miR-669j 68098 Rchy1 acaaACGUACACUCAU-AUACGu | :| |||| || ||||| gaacUUUAAGUGA-UACUAUGCa 2 19 311 332 [mm9:5:92378430-92378451:-] 0.6913 120 0 -10.73 -1.0885 MIMAT0005854 mmu-miR-467g 68098 Rchy1 uauauacacacACAUACAUau | |||||| uauaauacaauUUUAUGUAau 3 11 692 712 [mm9:5:92378050-92378070:-] 0.6023 122 0 -2.68 -0.2516 MIMAT0005856 mmu-miR-1195 68098 Rchy1 acUCGUCCGACCGGAGCUUGAGu | |||||||||||||||||| agACCAGGCUGGCCUCGAACUCa 2 22 572 594 [mm9:5:92378168-92378190:-] 0.5000 197 7 -45.31 -0.2324 MIMAT0005857 mmu-miR-1196 68098 Rchy1 uccGUCUC-CGUCCAUCUAAa | ||| |:: ||||||| ccuCUGAGCGUGUGUAGAUUg 2 18 205 225 [mm9:5:92378537-92378557:-] 0.6455 152 7 -14.26 -0.5795 MIMAT0007873 mmu-miR-1896 68098 Rchy1 gagGAGUGGGUGGUAGUCUCUc :|||:|:: ||||||||| ucgUUCAUCUG-CAUCAGAGAu 2 20 67 87 [mm9:5:92378675-92378695:-] 0.6611 165 7 -21.83 -0.7131 MIMAT0007878 mmu-miR-1894-3p 68098 Rchy1 gagggaagUGGGAGAGGGAAcg || :|:|||||| uauaaaagACAUUUUCCCUUug 3 15 810 831 [mm9:5:92377931-92377952:-] 0.6023 134 0 -17.29 -0.3132 MIMAT0009399 mmu-miR-1935 68098 Rchy1 ucUCUAGGCGGUCGGAGACGGa | |||:||| ||||||||| agAAAUCUGCCUGCCUCUGCCu 2 21 594 615 [mm9:5:92378147-92378168:-] 0.5000 180 7 -36.94 -0.1481 MIMAT0009409 mmu-miR-1944 68098 Rchy1 uuaGUCUUGAACUGUAAGUCGU-GUCUc ||| ::| | : || ||| |||| uccCAGUGUUCGUUCAUCUGCAUCAGAg 2 25 58 85 [mm9:5:92378677-92378704:-] 0.6611 124 0 -19.30 -0.7576 MIMAT0009412 mmu-miR-1946a 68098 Rchy1 uuUUCACACACGGUGGUGACGGGCCGa |:| ||||||||||| ||||||| aaAGGCAUGUGCCACCAC-GCCCGGCu 2 26 632 657 [mm9:5:92378105-92378130:-] 0.5000 191 7 -45.49 -0.1429 MIMAT0009430 mmu-miR-1957 68098 Rchy1 cagUAUACGAG--AUGGUGAc | |||:|: ||||||| cagAGAUGUUUCAUACCACUg 2 17 81 101 [mm9:5:92378661-92378681:-] 0.6533 151 7 -18.21 -0.6084 MIMAT0009438 mmu-miR-1965 68098 Rchy1 acGCGGUGAUGCCGGGCCGAa :||||| || |||||||| ugUGCCACCAC-GCCCGGCUg 2 20 639 658 [mm9:5:92378104-92378123:-] 0.5512 169 7 -34.20 -0.1606 MIMAT0011214 mmu-miR-2138 68098 Rchy1 uaaggcgguucgggcAAGGGAa |||||| uuuuacagacuuuuuUUCCCUc 2 8 744 765 [mm9:5:92377997-92378018:-] 0.6023 120 6 -10.90 -0.1145 MIMAT0012774 mmu-miR-664 68098 Rchy1 auccGACCCCU-CAUUUAC-UUAu || ||| | ||||| ||| agauCUCUGGAUGGAAAUGUAAUa 2 19 141 164 [mm9:5:92378598-92378621:-] 0.6455 121 0 -12.34 -0.9041 MIMAT0015641 mmu-miR-3470b 68098 Rchy1 ggucggaccagaUGUCUCAcu :|||||| gauacuaugcacGCAGAGUua 3 10 322 342 [mm9:5:92378420-92378440:-] 0.7371 121 0 -10.64 -0.1444 MIMAT0000123 mmu-miR-1 68098 Rchy1 uauguaugaagaaAUGUAAGgu ||||||| uucuugauagaacUACAUUCaa 3 10 351 372 [mm9:5:92378390-92378411:-] 0.7371 125 0 -8.00 -0.4682 MIMAT0000126 mmu-miR-27b 68098 Rchy1 cgUCUUGAAUCGGUGACACUu ||::|| | :||||||| uaAGGGCU--G-UACUGUGAu 2 20 393 410 [mm9:5:92378352-92378369:-] 0.6978 146 7 -17.67 -0.9431 MIMAT0000133 mmu-miR-101a 68098 Rchy1 aagucAAUAGUGUCAUGACAu | | :| ||||||| gauuuUAAGGGCUGUACUGUg 2 17 388 408 [mm9:5:92378354-92378374:-] 0.6978 144 7 -12.20 -0.8772 MIMAT0000133 mmu-miR-101a 68098 Rchy1 aaGUCAAUAGUGU--CAUGACau :| | || | | |||||| auUACUAAUGAAAUUGUACUGaa 3 20 715 737 [mm9:5:92378025-92378047:-] 0.6023 126 0 -7.91 -0.3081 MIMAT0000133 mmu-miR-101a 68098 Rchy1 aagucaauagugucAUGACAu |||||| aaauuguacugaaaUACUGUu 2 8 725 745 [mm9:5:92378017-92378037:-] 0.6023 120 6 -7.24 -0.1167 MIMAT0004528 mmu-miR-125a-3p 68098 Rchy1 ccGAGGGUUCUUGGAGUG-GACa || | |:| ||||| ||| ggCUGACCUGGAGCUCACUCUGu 2 21 549 571 [mm9:5:92378191-92378213:-] 0.5000 120 0 -25.38 -0.1106 MIMAT0000144 mmu-miR-132 68098 Rchy1 gcugguaccgacaucUGACAAu |||||| aaauuguacugaaauACUGUUu 2 8 725 746 [mm9:5:92378016-92378037:-] 0.6023 120 6 -9.65 -0.1049 MIMAT0000146 mmu-miR-134 68098 Rchy1 ggggagaccaguugGUCAGUGu :|||||| guuagucccagauaUAGUCACa 2 9 262 283 [mm9:5:92378479-92378500:-] 0.6455 124 6 -17.45 -0.3166 MIMAT0000147 mmu-miR-135a 68098 Rchy1 aguGUAUCCU-UAUUUUUCGGUAu | |: || | | ||||||| gcuCUUGUGACAACAUAAGCCAUc 2 21 783 806 [mm9:5:92377956-92377979:-] 0.6023 147 7 -9.16 -0.7409 MIMAT0000153 mmu-miR-141 68098 Rchy1 gguAGAAAUGGUCU---GUCACAAu ||| || ||| ||||||| agcUCUGUAAAAGAUCCCAGUGUUc 2 20 44 68 [mm9:5:92378694-92378718:-] 0.5787 154 7 -13.52 -0.2612 MIMAT0000156 mmu-miR-144 68098 Rchy1 ucaUGUAGUA-GA---UAUGACAu | ||::| || ||||||| augAAAUUGUACUGAAAUACUGUu 2 18 722 745 [mm9:5:92378017-92378040:-] 0.6023 143 7 -10.06 -1.1403 MIMAT0000156 mmu-miR-144 68098 Rchy1 ucauguaguaGAUAUGACAu ||:|||||| auuuuaagggCUGUACUGUg 2 11 389 408 [mm9:5:92378354-92378373:-] 0.6978 134 6 -14.55 -0.1056 MIMAT0000158 mmu-miR-146a 68098 Rchy1 uugGGUACCUUAAG-UCAAGAGu |::|| ||: ||||||: guaCUGUGAUUUUUAAGUUCUUa 2 20 401 423 [mm9:5:92378339-92378361:-] 0.6133 134 0 -12.71 -0.2629 MIMAT0000162 mmu-miR-152 68098 Rchy1 gguUCAAGACAGU-ACGUGACu | | || | ||:|||| auuACUAAUGAAAUUGUACUGa 2 19 715 736 [mm9:5:92378026-92378047:-] 0.6023 125 0 -11.77 -0.1270 MIMAT0000163 mmu-miR-153 68098 Rchy1 cuagUGAAA-ACAC--UGAUACGUu ||||| ||| |||||||| uggaACUUUAAGUGAUACUAUGCAc 2 19 309 333 [mm9:5:92378429-92378453:-] 0.6913 160 7 -14.96 -1.0048 MIMAT0000165 mmu-miR-155 68098 Rchy1 uggggaUAGUGUUAAUCG-UAAUu ||:::|| |||| |||| ugggugAUUGUAA-UAGCGAUUAc 2 18 173 195 [mm9:5:92378567-92378589:-] 0.6455 123 0 -7.55 -0.5533 MIMAT0000208 mmu-miR-10b 68098 Rchy1 guguuuAAGCCAAGA-----UGUCCCAu ||:|||||| ||||||| cucucuUUUGGUUCUUCCAGACAGGGUc 2 18 506 533 [mm9:5:92378229-92378256:-] 0.4997 156 7 -22.19 -0.1024 MIMAT0000239 mmu-miR-206 68098 Rchy1 ggugugugaaggaAUGUAAGgu ||||||| uucuugauagaacUACAUUCaa 3 10 351 372 [mm9:5:92378390-92378411:-] 0.7371 125 0 -7.93 -0.4715 MIMAT0000516 mmu-miR-148a 68098 Rchy1 uguuucaagacaUCACGUGACu | ||:|||| auuacuaaugaaAUUGUACUGa 2 11 715 736 [mm9:5:92378026-92378047:-] 0.6023 126 0 -11.63 -0.1270 MIMAT0000519 mmu-miR-200a 68098 Rchy1 uguAGCAAUGGUCU---GUCACAAu || || ||| ||||||| agcUCUGUAAAAGAUCCCAGUGUUc 2 20 44 68 [mm9:5:92378694-92378718:-] 0.5787 146 7 -12.15 -0.2612 MIMAT0000537 mmu-miR-27a 68098 Rchy1 cgcCUUGAAU---CG--GUGACACUu || :||| || :||||||| uuuGAUUUUAAGGGCUGUACUGUGAu 2 19 385 410 [mm9:5:92378352-92378377:-] 0.6978 144 7 -15.91 -0.9431 MIMAT0000559 mmu-miR-326 68098 Rchy1 ugacCUCCUUCCCGGGUCUcc || | | |||||| caauGAUGUUAGUCCCAGAua 3 18 255 275 [mm9:5:92378487-92378507:-] 0.6455 125 0 -11.49 -0.1589 MIMAT0000567 mmu-miR-329 68098 Rchy1 uuUUUCCAAUCGACCCAC--ACAa |:|| ||| ||||||| ||| auAGAGCUUA-CUGGGUGAUUGUa 2 21 162 184 [mm9:5:92378578-92378600:-] 0.6455 122 0 -17.29 -0.7802 MIMAT0004642 mmu-miR-330 68098 Rchy1 cgGAUUCUGU-GUCCGGGUCUcu | | ||:: :|| |||||| gcCAAUGAUGUUAGUCCCAGAua 3 21 253 275 [mm9:5:92378487-92378509:-] 0.6455 135 0 -16.39 -0.1604 MIMAT0000580 mmu-miR-148b 68098 Rchy1 ugUUUCAAGA-CACU---ACGUGACu ||| | || ||| ||:|||| auAAAUUACUAAUGAAAUUGUACUGa 2 21 711 736 [mm9:5:92378026-92378051:-] 0.6023 134 0 -11.91 -0.1270 MIMAT0000584 mmu-miR-339-5p 68098 Rchy1 gcACUCGAGGACCUCCUGUCCCu | :|:||:| | ||||||| uuUUGGUUCUUCCA-GACAGGGu 2 22 511 532 [mm9:5:92378230-92378251:-] 0.4997 155 7 -20.05 -0.2039 MIMAT0004651 mmu-miR-340-5p 68098 Rchy1 uuAGUCAGAGUAACGAAAUAUu ||| || | | :|||||| auUCA-UCGAAAUAUUUUAUAu 2 21 283 303 [mm9:5:92378459-92378479:-] 0.6455 138 6 -4.97 -0.1362 MIMAT0000612 mmu-miR-135b 68098 Rchy1 aguGUAUCCU-UACUUUUCGGUAu | |: || | | ||||||| gcuCUUGUGACAACAUAAGCCAUc 2 21 783 806 [mm9:5:92377956-92377979:-] 0.6023 147 7 -9.36 -0.7409 MIMAT0000616 mmu-miR-101b 68098 Rchy1 aagucgauagUGUCAUGACAu :| ||||||| gauuuuaaggGCUGUACUGUg 2 12 388 408 [mm9:5:92378354-92378374:-] 0.6978 143 7 -12.20 -0.8840 MIMAT0000616 mmu-miR-101b 68098 Rchy1 aagucgauagUGUCAUGACau |: |||||| uacuaaugaaAUUGUACUGaa 3 12 717 737 [mm9:5:92378025-92378045:-] 0.6023 123 0 -8.78 -0.3081 MIMAT0000616 mmu-miR-101b 68098 Rchy1 aagucgauagugucAUGACAu |||||| aaauuguacugaaaUACUGUu 2 8 725 745 [mm9:5:92378017-92378037:-] 0.6023 120 6 -7.49 -0.1179 MIMAT0000648 mmu-miR-10a 68098 Rchy1 guguuuAAGCCUAGA-----UGUCCCAu ||:|| ||| ||||||| cucucuUUUGGUUCUUCCAGACAGGGUc 2 18 506 533 [mm9:5:92378229-92378256:-] 0.4997 148 7 -17.81 -0.1024 MIMAT0000659 mmu-miR-212 68098 Rchy1 accGGCACUGAC-CUCUGACAAu ::|| |||| | |||||| aaaUUGU-ACUGAAAUACUGUUu 2 20 725 746 [mm9:5:92378016-92378037:-] 0.6023 124 6 -13.63 -0.1028 MIMAT0000662 mmu-miR-216a 68098 Rchy1 agUGUC-AAC-GGUCGACU-CUAAu |||| || || |||| |||| ucACAGCGUGAACACCUGAGGAUUc 2 21 115 139 [mm9:5:92378623-92378647:-] 0.6455 122 0 -19.13 -0.6623 MIMAT0000766 mmu-miR-335-5p 68098 Rchy1 ugUAAAAAGCAAUAA-CGAGAACu :|| || || || ||||||| agGUUGUUAAUUUUUGGCUCUUGu 2 22 767 790 [mm9:5:92377972-92377995:-] 0.6023 160 7 -13.84 -0.8500 MIMAT0000766 mmu-miR-335-5p 68098 Rchy1 uguaaAAAGCAAUAACGAGAACu || || |||:||||| cagagUUAAUUUCUUGUUCUUGa 2 19 335 357 [mm9:5:92378405-92378427:-] 0.7371 142 0 -13.33 -0.1426 MIMAT0004745 mmu-miR-384-5p 68098 Rchy1 ugUAACG-GAUCCUUA--AC-AAAUGu ||||: || | ||| || ||||| aaAUUGUACU-GAAAUACUGUUUUACa 2 22 725 750 [mm9:5:92378012-92378037:-] 0.6023 121 0 -9.71 -1.1529 MIMAT0004750 mmu-miR-425 68098 Rchy1 aguugcccucacuAGCACAGUaa | |||||| uuggaaauuccuuUAGUGUCAag 3 11 223 245 [mm9:5:92378517-92378539:-] 0.6455 122 0 -8.58 -0.1443 MIMAT0003112 mmu-miR-489 68098 Rchy1 cgacggUAUAUACACCACAGUaa || | | |||||| uuggaaAUUCCUUUAGUGUCAag 3 18 223 245 [mm9:5:92378517-92378539:-] 0.6455 125 0 -7.88 -0.1415 MIMAT0003169 mmu-miR-539 68098 Rchy1 ugUGUG-GUUCCUAUUAAAGAGg :||| ||: | ||||||||: auGCACGCAGAGUUAAUUUCUUg 2 21 328 350 [mm9:5:92378412-92378434:-] 0.7371 151 0 -16.87 -0.1762 MIMAT0003172 mmu-miR-542-3p 68098 Rchy1 aaAGUCAAUAGUUAGACAGUGu ||| || || ||||||| uuUCA--UACCA--CUGUCACa 2 21 89 106 [mm9:5:92378656-92378673:-] 0.6533 146 7 -13.87 -0.9415 MIMAT0003182 mmu-miR-494 68098 Rchy1 cuccaaaGGGCACAUACAAAGu :| | | ||||||| aucugcaUCAGAG-AUGUUUCa 2 16 73 93 [mm9:5:92378669-92378689:-] 0.6611 141 7 -11.00 -0.6669 MIMAT0003183 mmu-miR-376c 68098 Rchy1 ugcacuuuaaagGAGAUACAa :|:||||| acuauaauacaaUUUUAUGUa 2 10 690 710 [mm9:5:92378052-92378072:-] 0.6023 125 0 -6.01 -0.1195 MIMAT0003889 mmu-miR-758 68098 Rchy1 aucaccUGGU-CCAGUGUUu |||| ||||||| uuucauACCACUGUCACAAc 2 14 89 108 [mm9:5:92378654-92378673:-] 0.6533 148 7 -12.46 -0.6064 MIMAT0003889 mmu-miR-758 68098 Rchy1 aucacCUGGUCCAGUGUuu ||: |||||| ucccaGAUAUAGUCACAuu 3 15 267 285 [mm9:5:92378477-92378495:-] 0.6455 122 0 -11.51 -0.1021 MIMAT0003738 mmu-miR-496 68098 Rchy1 cuCUAACCGGUACAUUAUGAgu || | || | |||||| aaGACAGUCCUUUGAAUACUau 3 21 673 694 [mm9:5:92378068-92378089:-] 0.6023 132 0 -9.16 -0.1202 MIMAT0003450 mmu-miR-488 68098 Rchy1 cuGGUUCUUUGUC-GGAAAGUu |:||| |||| ||||| | uuCUAAG--ACAGUCCUUUGAa 2 20 669 688 [mm9:5:92378074-92378093:-] 0.6023 127 0 -15.88 -0.1057 MIMAT0003475 mmu-miR-146b 68098 Rchy1 ucgGAUACCUUAAG-UCAAGAGu ||:|| ||: ||||||: guaCUGUGAUUUUUAAGUUCUUa 2 20 401 423 [mm9:5:92378339-92378361:-] 0.6133 138 0 -15.55 -0.2629 MIMAT0003482 mmu-miR-499 68098 Rchy1 uuugUAGUGACGUUCAGAAuu ||: : | |||||| uucaAUUUUAACUAGUCUUug 3 18 368 388 [mm9:5:92378374-92378394:-] 0.7175 125 0 -6.89 -0.2363 MIMAT0004889 mmu-miR-504 68098 Rchy1 cuaucucACGUCUGGUCCCAGa | |||| ||||||| ugguucuUCCAGA-CAGGGUCu 2 16 514 534 [mm9:5:92378228-92378248:-] 0.4997 153 7 -20.96 -0.2349 MIMAT0004895 mmu-miR-590-5p 68098 Rchy1 gaCGUGAAAAUAC--UUA-UUCGAg || || | ||| :|| ||||| caGCUCUGUGAUGGAGAUGAAGCUc 2 21 24 48 [mm9:5:92378714-92378738:-] 0.4963 123 0 -17.84 -0.3462 MIMAT0004936 mmu-miR-873 68098 Rchy1 ucCUC--UGAGUGUUCAAGGACg ||| | |: | ||||:|| caGAGUUAAUUUCUUGUUCUUGa 2 20 335 357 [mm9:5:92378405-92378427:-] 0.7371 130 0 -13.27 -0.1029

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G013729 Rchy1 Mus musculus 68098 12654245

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Rchy1 mcmv-miR-M44-1 beg:42 end:59 pic:3' TGGCGCCGAGACCTTTTTCTAT 5'& |||||| ||||||| &5' ------GCTCTGT-AAAAGAT- 3' Rchy1 mmu-miR-879 beg:194 end:210 pic:3' CCGAATCTCGATATTCGGAGA 5'& |.|. |||||||| &5' ------GGGTG--AAGCCTCT 3' Rchy1 mmu-miR-532-5p beg:621 end:641 pic:3' TGCCAGGATGTGAG-TTCCGTAC 5'& ||| . |||||||| &5' ------CTAGGATTAAAGGCATG 3' Rchy1 mmu-miR-16star beg:727 end:744 pic:3' AGTCGTCGTGTCAGTTATGACC 5'& |.|| ||||||| &5' ------GTACTGA-AATACTG- 3' Rchy1 mmu-miR-10a beg:514 end:533 pic:3' GTGTTTAAGCCTAGA-----TGTCCCAT 5'& || ||| ||||||| &5' ---------GGTTCTTCCAGACAGGGT- 3' Rchy1 mmu-miR-10b beg:517 end:533 pic:3' GTGTTTAAGCCAAGA--TGTCCCAT 5'& ||| ||||||| &5' -----------TTCCAGACAGGGT- 3' Rchy1 mmu-miR-27b beg:392 end:410 pic:3' CGTCTTGAATCGGTGACACTT 5'& ||..|| .||||||| &5' --AGGGCTG---TACTGTGA- 3' Rchy1 mmu-miR-27a beg:393 end:410 pic:3' CGCCTTGAATCGGTGACACTT 5'& |..|| .||||||| &5' ---GGGCTG---TACTGTGA- 3' Rchy1 mmu-miR-759 beg:554 end:572 pic:3' CAGTTTTAACAAAC-GTGAGACG 5'& || |||||||. &5' --------TGGAGCTCACTCTGT 3' Rchy1 mmu-miR-504 beg:520 end:535 pic:3' CTATCTCACGTCTGGTCCCAGA 5'& |||| |||||||| &5' ---------CAGA-CAGGGTCT 3' Rchy1 mmu-miR-1965 beg:639 end:658 pic:3' ACGCGGTGATGCCGGGCCGAA 5'& |.||||| || |||||||| &5' -GTGCCACCAC-GCCCGGCT- 3' Rchy1 mmu-miR-153 beg:317 end:333 pic:3' CTAGTGAAAACACT--GATACGTT 5'& |||| ||||||| &5' ----------GTGATACTATGCA- 3' Rchy1 mmu-miR-709 beg:596 end:618 pic:3' AGGAGGACGGAGACGGAGG 5'& ||. ||||||||||||||. &5' TCTGCCTGCCTCTGCCTCT 3' Rchy1 mmu-miR-546 beg:632 end:649 pic:3' CTGAGGCACGGTGGTA 5'& |.| .||||||||| &5' GGCA-TGTGCCACCA- 3' Rchy1 mmu-miR-335-5p beg:774 end:790 pic:3' TGTAAAAAGCAATAACGAGAACT 5'& ||||.| ||||||| &5' ----TTTTTG-----GCTCTTG- 3' Rchy1 mmu-miR-101b beg:394 end:409 pic:3' AAGTCGATAGTGTCATGACAT 5'& .||| |||||||. &5' ---GGCT------GTACTGTG 3' Rchy1 mmu-miR-101a beg:395 end:409 pic:3' AAGTCAATAGTGTCATGACAT 5'& .| |||||||. &5' ----------GCTGTACTGTG 3' Rchy1 mmu-miR-1196 beg:207 end:225 pic:3' TCCGTCTC-CGTCCATCTAAA 5'& ||| |.. ||||||| &5' -----GAGCGTGTGTAGATT- 3' Rchy1 mcmv-miR-M87-1 beg:639 end:662 pic:3' CGACGGCGA--CGGCTGCCGACGGA 5'& |||| | ||| |||||||.| &5' --TGCCACCACGCC--CGGCTGCTT 3' Rchy1 mmu-let-7a beg:598 end:617 pic:3' TTGATATGT-TGGATGATGGAGT 5'& |.| .||| ||.|||| &5' -----TGCCTGCCT-CTGCCTC- 3' Rchy1 mmu-let-7b beg:597 end:617 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& | | | .||| ||.|||| &5' --CTGC-CTGCCT-CTGCCTC- 3' Rchy1 mmu-let-7c beg:594 end:617 pic:3' TTGGTATGT-TGGATGATGGAGT 5'& ||.| |.| .||| ||.|||| &5' AATC-TGCCTGCCT-CTGCCTC- 3' Rchy1 mmu-let-7d beg:598 end:618 pic:3' TTGATACGT-TGGATGATGGAGA 5'& ||| .||| ||.||||| &5' -----TGCCTGCCT-CTGCCTCT 3' Rchy1 mmu-let-7e beg:586 end:611 pic:3' TTGATATGTTGGA-GGATGGAGT 5'& |||| ||.|| |||.|||| &5' AACTCAGAAATCTGCCTGCCTC- 3' Rchy1 mmu-let-7f beg:594 end:611 pic:3' TTGATATGTTAGAT-GATGGAGT 5'& |||||. ||.|||| &5' --------AATCTGCCTGCCTC- 3' Rchy1 mmu-let-7g beg:598 end:617 pic:3' TTGACATGTTTGATGATGGAGT 5'& |.| .| ||.|||| &5' -----TGCCTGCCTCTGCCTC- 3' Rchy1 mmu-let-7g beg:565 end:588 pic:3' TTGACAT---GTTTGATGATGGAGT 5'& ||||| ||..||. .|||| &5' --CTGTAGACCAGGCTG--GCCTC- 3' Rchy1 mmu-let-7i beg:599 end:617 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& || | .| ||.|||| &5' ----GC-CT-GCCTCTGCCTC- 3' Rchy1 mmu-miR-1186b beg:250 end:272 pic:3' CACCACG--TACGGAAATTAGGGT 5'& || ||| |||.||||| &5' -----GCCAATGATGTTAGTCCCA 3' Rchy1 mmu-miR-1186b beg:42 end:63 pic:3' CACCACGT-ACGGAAATTAGGGT 5'& || ||. .|||||| &5' -----GCTCTGTAAAAGATCCCA 3' Rchy1 mmu-miR-1195 beg:570 end:595 pic:3' ACTCGTCCGACCGGAGCTTGAGT 5'& || ||||||||||||||||||| &5' -GACCAGGCTGGCCTCGAACTCA 3' Rchy1 mmu-miR-1195 beg:537 end:566 pic:3' AC-TCGT--CCGACCGGAGCTTGAGT 5'& || ||| ||||| ||| ||.|||| &5' TGTAGCCCTGGCTGACCTGGAGCTCA 3' Rchy1 mmu-miR-1198 beg:790 end:814 pic:3' GGTTCGG--TCGGTCCTTGTGTAT 5'& ||| | ||||| |.|.||| &5' -CAA-CATAAGCCATC-ATATATA 3' Rchy1 mmu-miR-1199 beg:576 end:597 pic:3' GGCGCGCTGGCCC-TGAGTCT 5'& || .|.|| | ||||||| &5' --GC-TGGCCTCGAACTCAGA 3' Rchy1 mmu-miR-124star beg:108 end:130 pic:3' TAGTTCCAGG--CGACACTTGTGC 5'& ..|||| || |||||||| &5' ---GGGGTCACAGC-GTGAACAC- 3' Rchy1 mmu-miR-128 beg:391 end:410 pic:3' TTTCTCTGGCCAAGTGACACT 5'& ||| |.|.| .||||||| &5' -AAG-GGCTG---TACTGTGA 3' Rchy1 mmu-miR-129-3p beg:381 end:401 pic:3' TACGAAAAACCCCATTCCCGAA 5'& | ||| |||||||| &5' --GTCTTTGATTTTAAGGGCT- 3' Rchy1 mmu-miR-1306 beg:634 end:657 pic:3' GTA-GTGGTGGTCTCGGTTGCA 5'& ||| ..|||||| ||..| &5' CATGTGCCACCACGCCCGGC-- 3' Rchy1 mmu-miR-136 beg:21 end:40 pic:3' GGTAGTAGTTTTGT--TTACCTCA 5'& ||. | .|||||| &5' -------CAGCTCTGTGATGGAG- 3' Rchy1 mmu-miR-139-5p beg:553 end:575 pic:3' GACCTCT-GTGCACGTGACATCT 5'& |||||| ||| ||||||| &5' CTGGAGCTCACT----CTGTAGA 3' Rchy1 mmu-miR-144 beg:396 end:409 pic:3' TCATGTAGTAGATATGACAT 5'& ||.||||||. &5' ----------CTGTACTGTG 3' Rchy1 mmu-miR-146a beg:401 end:424 pic:3' TTGGGTACCTTAAG-TCAAGAGT 5'& |..|| ||. ||||||.| &5' ---CTGTGATTTTTAAGTTCTTA 3' Rchy1 mmu-miR-146b beg:401 end:424 pic:3' TCGGATACCTTAAG-TCAAGAGT 5'& ||.|| ||. ||||||.| &5' ---CTGTGATTTTTAAGTTCTTA 3' Rchy1 mmu-miR-185 beg:458 end:472 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& |.||||||||. &5' ----------CTTTTCTCTCT- 3' Rchy1 mmu-miR-185 beg:466 end:490 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& || || .|| ||||||. &5' TCTCTCTCTCTCTCTCTCTCT- 3' Rchy1 mmu-miR-185 beg:478 end:502 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& || || .|| ||||||. &5' TCTCTCTCTCTCTCTCTCTCT- 3' Rchy1 mmu-miR-185 beg:491 end:508 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& || .|| ||||||. &5' -------CTCTCTCTCTCTCT- 3' Rchy1 mmu-miR-1894-3p beg:463 end:486 pic:3' GAGGGA-AGTGGGAGAGGGAACG 5'& |||.|| || |.|||||.|| &5' CTCTCTCTCTCTCTCTCTCT--- 3' Rchy1 mmu-miR-1894-3p beg:491 end:516 pic:3' GAGGGA-AGTGGGAGAGGGAACG 5'& |||.|| || |.|||||..||| &5' CTCTCTCTCTCTCTCTCTTTTG- 3' Rchy1 mmu-miR-1896 beg:64 end:87 pic:3' GAG-GAGTGGGTGGTAGTCTCTC 5'& || .|||.| | |||||||| &5' -TCGTTCATCTGC-ATCAGAGA- 3' Rchy1 mmu-miR-1929 beg:605 end:630 pic:3' GAGAC-GAGATATTTCAGGATCTT 5'& ||||| |||| |||| ||||.| &5' CTCTGCCTCTC--AAGTGCTAGGA 3' Rchy1 mmu-miR-1935 beg:591 end:616 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& ||| |||.||| |||||||||| &5' AGAAATCTGCCTGCCTCTGCCT 3' Rchy1 mmu-miR-1941-3p beg:617 end:631 pic:3' TACCCTCTATGACGATTCTAC 5'& | |||||.||| &5' ---------AGTGCTAGGAT- 3' Rchy1 mmu-miR-1941-5p beg:524 end:539 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& ||| .||||.|| &5' ------------CAGGGTCTCTCT 3' Rchy1 mmu-miR-1946a beg:636 end:658 pic:3' TTTTCACACACGGTGGTGACGGGCCGA 5'& ||||||||||| |||||||| &5' -------TGTGCCACCAC-GCCCGGCT 3' Rchy1 mmu-miR-1946b beg:629 end:657 pic:3' TTTTCGTACACGGTGGTGACGGGCCG 5'& |||.|||||||||||||| ||||||| &5' AAAGGCATGTGCCACCAC-GCCCGGC 3' Rchy1 mmu-miR-1954 beg:522 end:545 pic:3' TTGTCCCAGAGTGAGACGTCA 5'& .|||||||||| || ||.|| &5' GACAGGGTCTCTCTGTGTAG- 3' Rchy1 mmu-miR-1957 beg:83 end:102 pic:3' CAGTATACGAG--ATGGTGAC 5'& |||.|. |||||||| &5' -----ATGTTTCATACCACTG 3' Rchy1 mmu-miR-1958 beg:444 end:468 pic:3' TGAATGACGAAGGT--GAAAGGAT 5'& |||| .|||. ||||.|| &5' -CTTAAT-TTTCTTTTCTTTTCT- 3' Rchy1 mmu-miR-1961 beg:601 end:617 pic:3' AAGATTGATGATGGAGT 5'& ||. || ||.|||| &5' --CTGCCT-CTGCCTC- 3' Rchy1 mmu-miR-1968 beg:640 end:660 pic:3' TCAGGTGGTA-GGAATTGTCGACGT 5'& |||||| || |.||||| &5' ---CCACCACGCC----CGGCTGC- 3' Rchy1 mmu-miR-201 beg:185 end:202 pic:3' TTCTTGTTACGG-AATGACTCAT 5'& || ||||||.||. &5' ---------GCGATTACTGGGTG 3' Rchy1 mmu-miR-206 beg:744 end:768 pic:3' GGTGTGTGAAGGAATGTAAGGT 5'& .||| ||||..|| | ||.| &5' -TACAGACTTTTTTTCCCTCTA 3' Rchy1 mmu-miR-2140 beg:64 end:82 pic:3' TGGTGGTTC-TAGACGTGGA 5'& .|. |||||||.| &5' ----TCGTTCATCTGCATC- 3' Rchy1 mmu-miR-2145 beg:570 end:589 pic:3' TTGGTCCGGGCTGGGACGA 5'& .|||||| |.|.|| | &5' GACCAGG-CTGGCCTCG-- 3' Rchy1 mmu-miR-2145 beg:594 end:614 pic:3' TTGGTCCGGGCTGGGACGA 5'& ||.| |||.| |.|||| &5' AATCT-GCCTGCCTCTGC- 3' Rchy1 mmu-miR-222 beg:562 end:585 pic:3' TGGGTCATC-GGTCTACATCGA 5'& ||.| |||| ||||. |.|| &5' ACTCTGTAGACCAGGC-TGGC- 3' Rchy1 mmu-miR-27a beg:16 end:35 pic:3' CGC-CTTGAATCGGTGACACTT 5'& | |||| |||. |||||| &5' --GAGAAC--AGCT-CTGTGA- 3' Rchy1 mmu-miR-2861 beg:597 end:617 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.|||.||| |. |||.| &5' CTGCCTGCCTCT--GCCTC 3' Rchy1 mmu-miR-298 beg:591 end:615 pic:3' CCCTTCTTGT--CGGGAGGAGACGG 5'& |||| |||. |||||||| &5' ----AGAAATCTGCCTGCCTCTGCC 3' Rchy1 mmu-miR-299star beg:567 end:578 pic:3' TACATACACCCTGCCATTTGGT 5'& |||.|||| &5' --------------GTAGACCA 3' Rchy1 mmu-miR-301a beg:679 end:700 pic:3' CGAAACTGTTATGATAACGTGAC 5'& |||||| ||||||| .|| &5' -CTTTGA--ATACTATAATAC-- 3' Rchy1 mmu-miR-3099 beg:461 end:484 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& |.|.| .|||||||| |. &5' TTCTCTCTCTCTCTCTCTCT-- 3' Rchy1 mmu-miR-3099 beg:488 end:513 pic:3' AGGGGTTG-GAGAGAGATCGGAT 5'& ||.|. | |||||||| |.| &5' TCTCTCTCTCTCTCTCTCTCTT- 3' Rchy1 mmu-miR-30c-2star beg:514 end:526 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& ||||.|||| &5' -------------TTCTTCCAG 3' Rchy1 mmu-miR-327 beg:604 end:623 pic:3' TAGGAGTACGGGGAGTTCA 5'& |||| ||||.||||||| &5' --CCTC-TGCCTCTCAAGT 3' Rchy1 mmu-miR-339-5p beg:512 end:532 pic:3' GCACTCGAGGACCTCCTGTCCCT 5'& .|.||.| ||||||| &5' ----GGTTCTTCCA-GACAGGG- 3' Rchy1 mmu-miR-3475 beg:513 end:527 pic:3' AAGTTTGGTACACGGAGGTCT 5'& || |.|||||| &5' ----------GTTCTTCCAGA 3' Rchy1 mmu-miR-374star beg:681 end:704 pic:3' GAGCCTGTTACTATTATGTTGG 5'& ||. || |||||||||.. &5' CTTTGAATACTATAATACAATT 3' Rchy1 mmu-miR-376astar beg:587 end:605 pic:3' TGAGTATCTTCCTCTTAGATGG 5'& ||||| || |||||.|| &5' ACTCA------GA-AATCTGCC 3' Rchy1 mmu-miR-376b beg:24 end:36 pic:3' TTCACCTACAAGGAGATACTA 5'& ||||.|||| &5' ------------CTCTGTGAT 3' Rchy1 mmu-miR-376c beg:522 end:543 pic:3' TGCACT-TTAAAG-GAGATACAA 5'& || |. || ||||.||| &5' ----GACAGGGTCTCTCTGTGT- 3' Rchy1 mmu-miR-382 beg:109 end:132 pic:3' GCTTAG-GTGGTGCTTGTTGAAG 5'& |..|| || |..||||| || &5' -GGGTCACAGCGTGAACACCT-- 3' Rchy1 mmu-miR-423-5p beg:596 end:620 pic:3' TTTCAGA---GCGAGAGACGGGGAGT 5'& ||| .|| |||||||.|||| &5' ----TCTGCCTGC-CTCTGCCTCTCA 3' Rchy1 mmu-miR-450b-5p beg:555 end:575 pic:3' ATAAGTCCTTGTAT--GACGTTTT 5'& |||.| |||.|.| &5' ------GGAGCTCACTCTGTAGA- 3' Rchy1 mmu-miR-452 beg:559 end:576 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& |||| |||||.|.|| &5' --CTCA-----CTCTGTAGAC- 3' Rchy1 mmu-miR-468 beg:267 end:290 pic:3' GTCTGTGTGCGTGTAGTCAGTAT 5'& ||||.|.| |||||. ||. &5' CAGATATAGTCACATTCATCG-- 3' Rchy1 mmu-miR-483 beg:452 end:474 pic:3' GAGGGAAGAGAAGAGGGCAGAA 5'& ||..||||.|||||.| ||| &5' -TCTTTTCTTTTCTCTC-TCT- 3' Rchy1 mmu-miR-483 beg:463 end:488 pic:3' GAGGGA-AGAGA-AGAGGGCAGAA 5'& |||.|| ||||| ||||.| ||| &5' CTCTCTCTCTCTCTCTCTC-TCT- 3' Rchy1 mmu-miR-483 beg:487 end:513 pic:3' GAGGGA-AGAGA-AGAGGGCAGAA 5'& |||.|| ||||| ||||.| |||| &5' CTCTCTCTCTCTCTCTCTC-TCTT 3' Rchy1 mmu-miR-490 beg:759 end:773 pic:3' GTCGTACCTCAGGAGGTCCAAC 5'& ||||.|||||| &5' -----------CCTCTAGGTTG 3' Rchy1 mmu-miR-511 beg:617 end:640 pic:3' ACTCACGTCTCGT-TTTCCGTA 5'& ||||| .| |||||||| &5' --AGTGCTAGGATTAAAGGCAT 3' Rchy1 mmu-miR-539 beg:328 end:350 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& .|||.| .|| ||||||||. &5' GCACGCAGAGT-TAATTTCTT- 3' Rchy1 mmu-miR-541 beg:211 end:236 pic:3' TCACACTGGTTGTAGTC-TTAGGGAA 5'& ||||| | || | |||.|||| &5' -GTGTGT---AGATTGGAAATTCCTT 3' Rchy1 mmu-miR-546 beg:798 end:809 pic:3' CTGAGGCACGGTGGTA 5'& ||||.||| &5' --------GCCATCAT 3' Rchy1 mmu-miR-592 beg:278 end:303 pic:3' TGT-AGTAGCG-TATAACTGTGTTA 5'& ||| |||||| ||||| .|.| &5' ACATTCATCGAAATATTT-TATA-- 3' Rchy1 mmu-miR-592 beg:74 end:96 pic:3' TGTAGTAGCGTATAACTGTGTTA 5'& .||||| | ||.|| ||.| &5' GCATCAGAG-ATGTTT-CATA-- 3' Rchy1 mmu-miR-654-3p beg:259 end:278 pic:3' TTCCACTACCAGTC---GTCTGTAT 5'& ||.|| ||||.||| &5' ---------GTTAGTCCCAGATATA 3' Rchy1 mmu-miR-666-5p beg:590 end:608 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |||| | | ||||.|| &5' ----CTCAGAAATCTGCCTGC- 3' Rchy1 mmu-miR-671-3p beg:536 end:561 pic:3' CCACCTCGGGACTC-TTGG-CCT 5'& ||| |||||||. .||| ||| &5' -GTGTAGCCCTGGCTGACCTGGA 3' Rchy1 mmu-miR-673-3p beg:119 end:152 pic:3' CCAC--GTG---TCTTGAGTC---GGGGCCT 5'& ||| ||| ||.|.||| |.|.||| &5' -GTGAACACCTGAGGATTCAAGATCTCTGGA 3' Rchy1 mmu-miR-673-5p beg:388 end:410 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& |..||||.|. | |||||| &5' -TTTAAGGGCT-GTACTGTGA- 3' Rchy1 mmu-miR-673-5p beg:16 end:35 pic:3' GAGGTTC-CTGGTCTCGACACTC 5'& || || ||| |||||| &5' -----AGAGAACAGCTCTGTGA- 3' Rchy1 mmu-miR-708 beg:648 end:673 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |||.|||. || ||| .|.|| &5' CCCGGCTGCTTTTTAATTTTCT- 3' Rchy1 mmu-miR-741 beg:521 end:538 pic:3' AGATGTATCTTACCGTAGAGAGT 5'& ||| || .|||||| &5' -------AGACAGG-GTCTCTC- 3' Rchy1 mmu-miR-743b-5p beg:195 end:214 pic:3' ACTACCTGTGGTCAGACTTGT 5'& |.|| .|| |||||.| &5' -GGTGAA-GCC--TCTGAGC- 3' Rchy1 mmu-miR-758 beg:107 end:121 pic:3' ATCACCTGGTCCAGTGTTT 5'& || .|||||||. &5' ----GG---GGGTCACAG- 3' Rchy1 mmu-miR-7a beg:506 end:525 pic:3' TGTTGTTTTAGT-GATC-AGAAGGT 5'& || .|.| ||||||| &5' ---------TCTTTTGGTTCTTCCA 3' Rchy1 mmu-miR-7b beg:506 end:525 pic:3' TGTTGTTTTAGTGT-TC-AGAAGGT 5'& || .| ||||||| &5' ---------TCTTTTGGTTCTTCCA 3' Rchy1 mmu-miR-881star beg:522 end:540 pic:3' TCTACACTGACAATAGAGAGAC 5'& ||| .|||||||| &5' ------GACAGG-GTCTCTCTG 3' Rchy1 mmu-miR-882 beg:458 end:480 pic:3' TGATTACGCGATTGAGAGAGGA 5'& || | | || |||||||. &5' -CTTTT-CTCTCTCTCTCTCT- 3' Rchy1 mmu-miR-98 beg:599 end:617 pic:3' TTGTTATGT-TGAATGATGGAGT 5'& |.| .| ||.|||| &5' -----TGCCTGCCT-CTGCCTC- 3' Rchy1 mmu-miR-9star beg:230 end:251 pic:3' TGAAAGCCAATAGATCGAAATA 5'& |||| |.|| ||.|||. &5' -CTTTAG--TGTCAAGTTTTG- 3' Rchy1 mmu-miR-574-3p beg:201 end:217 pic:3' ACACCCACACACGT--ACTCGCAC 5'& || |||||||| &5' -----------GCCTCTGAGCGTG 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rchy1 RAID00009715 mmu-miR-216a-3p miRNA MIMAT0017054 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00162814 mmu-miR-153-3p miRNA MIMAT0000163 Rchy1 mRNA 68098 Prediction 0.2381 Rchy1 RAID00210296 mmu-miR-329-3p miRNA MIMAT0000567 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00349903 mmu-miR-7041-5p miRNA MIMAT0027986 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00592443 mmu-miR-488-3p miRNA MIMAT0003450 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00617846 mmu-miR-499-5p miRNA MIMAT0003482 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00697531 mmu-miR-7063-5p miRNA MIMAT0028030 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00721594 mmu-miR-499-3p miRNA MIMAT0017254 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00732946 mmu-miR-494-3p miRNA MIMAT0003182 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00850604 mmu-miR-139-5p miRNA MIMAT0000656 Rchy1 mRNA 68098 CLIP-seq 0.5483 Rchy1 RAID00887828 mmu-miR-6991-3p miRNA MIMAT0027885 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00896645 mmu-miR-590-5p miRNA MIMAT0004895 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID00965706 mmu-miR-539-5p miRNA MIMAT0003169 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01051981 mmu-miR-1946a miRNA MIMAT0009412 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01082417 mmu-miR-155-5p miRNA MIMAT0000165 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01242397 mmu-miR-542-3p miRNA MIMAT0003172 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01247293 mmu-miR-206-3p miRNA MIMAT0000239 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01248784 mmu-miR-212-3p miRNA MIMAT0000659 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01249858 mmu-miR-694 miRNA MIMAT0003474 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01307594 mmu-miR-10b-5p miRNA MIMAT0000208 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01418432 mmu-miR-10a-5p miRNA MIMAT0000648 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01517025 mmu-miR-1199-5p miRNA MIMAT0005860 Rchy1 mRNA 68098 CLIP-seq 0.5483 Rchy1 RAID01669112 mmu-miR-1195 miRNA MIMAT0005856 Rchy1 mRNA 68098 CLIP-seq 0.5483 Rchy1 RAID01708164 mmu-miR-873a-5p miRNA MIMAT0004936 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01900304 mmu-miR-5135 miRNA MIMAT0020646 Rchy1 mRNA 68098 CLIP-seq 0.5483 Rchy1 RAID01907796 mmu-miR-148b-3p miRNA MIMAT0000580 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01908702 mmu-miR-551b-5p miRNA MIMAT0017236 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID01974074 mmu-miR-1a-3p miRNA MIMAT0000123 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02045263 mmu-miR-384-5p miRNA MIMAT0004745 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02059749 mmu-miR-132-3p miRNA MIMAT0000144 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02188158 mmu-miR-425-5p miRNA MIMAT0004750 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02199247 mmu-miR-141-3p miRNA MIMAT0000153 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02294776 mmu-miR-376c-3p miRNA MIMAT0003183 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02304951 mmu-miR-146b-5p miRNA MIMAT0003475 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02334225 mmu-miR-7002-5p miRNA MIMAT0027906 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02375854 mmu-miR-135b-5p miRNA MIMAT0000612 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02387198 mmu-miR-3082-5p miRNA MIMAT0014872 Rchy1 mRNA 68098 CLIP-seq 0.5483 Rchy1 RAID02388152 mmu-miR-758-3p miRNA MIMAT0003889 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02461250 mmu-miR-152-3p miRNA MIMAT0000162 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02606403 mmu-miR-126b-5p miRNA MIMAT0029894 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02615386 mmu-miR-129-1-3p miRNA MIMAT0016994 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02818087 mmu-miR-27a-3p miRNA MIMAT0000537 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02830748 mmu-miR-101a-3p miRNA MIMAT0000133 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02854937 mmu-miR-146a-5p miRNA MIMAT0000158 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02910852 mmu-miR-326-3p miRNA MIMAT0000559 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02918895 mmu-miR-27b-3p miRNA MIMAT0000126 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02951903 mmu-miR-291b-5p miRNA MIMAT0003189 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02967504 mmu-miR-290b-5p miRNA MIMAT0029900 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID02975830 mmu-miR-134-5p miRNA MIMAT0000146 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03000403 mmu-miR-330-5p miRNA MIMAT0004642 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03072752 mmu-miR-496a-3p miRNA MIMAT0003738 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03144853 mmu-miR-3100-3p miRNA MIMAT0014920 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03157826 mmu-miR-339-5p miRNA MIMAT0000584 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03228539 mmu-miR-340-5p miRNA MIMAT0004651 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03306232 mmu-miR-489-3p miRNA MIMAT0003112 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03314168 mmu-miR-153-5p miRNA MIMAT0016992 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03329385 mmu-miR-216a-5p miRNA MIMAT0000662 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03395305 mmu-miR-881-5p miRNA MIMAT0004845 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03417258 mmu-miR-7094-3p miRNA MIMAT0028095 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03421810 mmu-miR-125a-3p miRNA MIMAT0004528 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03444618 mmu-miR-144-3p miRNA MIMAT0000156 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03469426 mmu-miR-7211-5p miRNA MIMAT0028390 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03655611 mmu-miR-135a-5p miRNA MIMAT0000147 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03700743 mmu-miR-148a-3p miRNA MIMAT0000516 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03707919 mmu-miR-129-2-3p miRNA MIMAT0000544 Rchy1 mRNA 68098 Prediction 0.2202 Rchy1 RAID03770429 mmu-miR-504-5p miRNA MIMAT0004889 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03784357 mmu-miR-101b-3p miRNA MIMAT0000616 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03854226 mmu-miR-6388 miRNA MIMAT0025135 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03857056 mmu-miR-3089-5p miRNA MIMAT0014899 Rchy1 mRNA 68098 CLIP-seq 0.5483 Rchy1 RAID03939941 mmu-miR-335-5p miRNA MIMAT0000766 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID03940109 mmu-miR-200a-3p miRNA MIMAT0000519 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID04039376 mmu-miR-291a-5p miRNA MIMAT0000367 Rchy1 mRNA 68098 Prediction 0.1828 Rchy1 RAID04060912 mmu-miR-759 miRNA MIMAT0003897 Rchy1 mRNA 68098 CLIP-seq 0.5483