DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Brap ATTTA 182-1957 2210-2214;2864-2868;2970-2974 Brap WWATTTAWW 182-1957 2862-2870 Brap WWWATTTAWWW 182-1957 2861-2871

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT014829 mmu-miR-149-5p Mus musculus Brap 72399 Mus musculus Sequencing Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000129 mmu-miR-30a* 72399 Brap cgacguuuguaggCUGACUUUc |||||||| ugauuggggugggGACUGAAAa 2 10 1481 1502 [mm9:5:122113758-122113779:+] 0.5018 145 7 -13.04 -0.1406 MIMAT0004527 mmu-miR-124* 72399 Brap uaGUUCCAGGC-GACACUUGUGc ||: || | |||||||||| aaCAGAGUGAGUCUGUGAACACa 2 21 1097 1119 [mm9:5:122113374-122113396:+] 0.7012 163 7 -22.10 -0.4796 MIMAT0004529 mmu-miR-125b* 72399 Brap uccaggGUUC-UUGGACUGAACa |||| : |||||||| cucugaCAAGCUGACUGACUUGu 2 17 720 742 [mm9:5:122136221-122136243:+] 0.6064 151 7 -19.34 -0.1556 MIMAT0004529 mmu-miR-125b* 72399 Brap ucCAGGGUUCUUGGACU-GAACa |||::: |:|||| |||| uuGUCUUGCACAUCUGACCUUGc 2 21 1458 1480 [mm9:5:122136959-122136981:+] 0.6529 124 0 -16.34 -0.1822 MIMAT0000143 mmu-miR-9* 72399 Brap ugAAAGCCAAUAGAUCGAA-AUa | |:|| ||:|||||| || caUGUUGG-GAUUUAGCUUCUAa 2 21 1004 1025 [mm9:5:122136505-122136526:+] 0.5537 126 0 -13.01 -0.5958 MIMAT0000152 mmu-miR-140* 72399 Brap ggcaccaagauggGACACCAu ||||||| gucugaggacgaaCUGUGGUc 2 9 89 109 [mm9:5:122135590-122135610:+] 0.5990 140 7 -16.44 -0.3973 MIMAT0004534 mmu-miR-145* 72399 Brap guucUUGUCAUAAAGGUCCUUa || | |: ||||||||| uuuuAAAAAUG-UUCCAGGAAa 2 19 1690 1710 [mm9:5:122137191-122137211:+] 0.5664 156 7 -13.56 -1.2272 MIMAT0004534 mmu-miR-145* 72399 Brap guucuugucAUAAAGGUCCUUa || ||||||| gccucucuuUAGAGCCAGGAAc 2 14 936 957 [mm9:5:122136437-122136458:+] 0.5537 141 7 -13.06 -0.1787 MIMAT0004537 mmu-miR-154* 72399 Brap uuAUCC-AGUUGGCACAUAC-UAa |:|| ||| :||||||| || ggUGGGAUCA--UGUGUAUGCAUc 2 21 75 96 [mm9:5:122112352-122112373:+] 0.4997 124 0 -17.58 -0.1235 MIMAT0000217 mmu-miR-188-5p 72399 Brap ggGAGGUGGUAC-GUUCCCUAc :|: | :|| :||||||| guUUUGAGAGUGUUAAGGGAUu 2 20 608 629 [mm9:5:122112885-122112906:+] 0.5136 146 7 -14.82 -1.0107 MIMAT0004541 mmu-miR-188-3p 72399 Brap acGUUUGGGACGUA-CACCCUc || :|||| :| |||||| uuCACCUCCUGAGUGGUGGGAu 2 20 61 82 [mm9:5:122112338-122112359:+] 0.4997 127 6 -20.24 -0.1048 MIMAT0004545 mmu-miR-200b* 72399 Brap agGUUACGA-CGGGUCAUUCUAc :||| :| |:: ||||||| gcUAAUUUUCACUUUGUAAGAUg 2 21 1008 1030 [mm9:5:122113285-122113307:+] 0.6164 151 7 -15.70 -0.7169 MIMAT0000249 mmu-miR-30e* 72399 Brap cgacauuuguaggCUGACUUUc |||||||| ugauuggggugggGACUGAAAa 2 10 1481 1502 [mm9:5:122113758-122113779:+] 0.5018 145 7 -13.04 -0.1406 MIMAT0004573 mmu-miR-293* 72399 Brap guuuuACAGUGUGUCAAACUCa |||: : ||||||| uuguuUGUUUGUUUGUUUGAGa 2 18 1624 1645 [mm9:5:122113901-122113922:+] 0.5000 145 7 -10.61 -0.8503 MIMAT0004573 mmu-miR-293* 72399 Brap guuuuacaGUGUGUCAA-ACUCa :||| |||| |||| cuguggacUACAGAGUUCUGAGu 2 15 1344 1366 [mm9:5:122113621-122113643:+] 0.5760 122 0 -15.99 -0.1333 MIMAT0004574 mmu-miR-294* 72399 Brap ucuaUCC-CGGAGG-----UAAAACUCa ||| ||:||: :||||||| ugggAGGAGCUUCUGUUGGGUUUUGAGa 2 19 589 616 [mm9:5:122112866-122112893:+] 0.5136 144 7 -19.16 -0.2962 MIMAT0000377 mmu-miR-299* 72399 Brap uaCAUACACCCUGCCAUUUGGu | | | | |: ||||||| uuGAAAGGGUUAU-GUAAACCc 2 21 250 270 [mm9:5:122112527-122112547:+] 0.4985 142 7 -13.43 -0.2644 MIMAT0000377 mmu-miR-299* 72399 Brap uacauacaccCUGCCAUUUGGu |:: ||||||| gaaagggcuaGGUUGUAAACCa 2 13 485 506 [mm9:5:122135986-122136007:+] 0.6064 144 7 -15.01 -0.3503 MIMAT0004578 mmu-miR-300* 72399 Brap uguuuccUAUUGGAGAGA-AGUu :||:::||||| ||| caauguuGUAGUUUCUCUGUCAc 2 16 916 938 [mm9:5:122113193-122113215:+] 0.5013 123 0 -12.88 -0.5976 MIMAT0000378 mmu-miR-300 72399 Brap cuUCUCUCGAACGGGAACGUAu ||||||| || ||||||| agAGAGAGC-UG--CUUGCAUg 2 21 459 477 [mm9:5:122135960-122135978:+] 0.6064 163 7 -24.97 -0.1368 MIMAT0004580 mmu-miR-34c* 72399 Brap ggaccGACAC-ACCAAU-CACUAa :|||| | ||| ||||| agcacUUGUGUUCUUUAUGUGAUu 2 18 201 224 [mm9:5:122112478-122112501:+] 0.5115 120 0 -12.53 -0.4766 MIMAT0004583 mmu-miR-130b* 72399 Brap ucaUCACGUUGUCCCUU-UCUCa || | |::|| ||| |||| cacAGAGAAGUAGAGAACAGAGu 2 20 1082 1104 [mm9:5:122113359-122113381:+] 0.6039 127 0 -12.32 -0.1392 MIMAT0004616 mmu-miR-30c-1* 72399 Brap ccuCAUUU--GUUGGGAGAGGGUc ||||: :|:| |||||||| cauGUAAGGCUAGCGCUCUCCCAa 2 20 144 167 [mm9:5:122112421-122112444:+] 0.4997 162 7 -22.73 -0.1066 MIMAT0005438 mmu-miR-30c-2* 72399 Brap ucuCAUUU--GUCGGAAGAGGGUc ||||: :||| ||||||| cauGUAAGGCUAGCGCUCUCCCAa 2 20 144 167 [mm9:5:122112421-122112444:+] 0.4997 158 7 -19.58 -0.1077 MIMAT0004619 mmu-miR-200a* 72399 Brap aggucGUGACAGGCCAUUCUAc |||| | ||||||| auuuuCACUUU---GUAAGAUg 2 18 1012 1030 [mm9:5:122113289-122113307:+] 0.6164 145 7 -14.32 -0.6733 MIMAT0004622 mmu-let-7c-1* 72399 Brap ccUUUCGAUCU-UCCAACA-UGUc :|| ||||| |||||| ||| gaGAAACUAGAUUGGUUGUCACAa 2 21 320 343 [mm9:5:122112597-122112620:+] 0.4966 135 0 -19.17 -0.3488 MIMAT0004624 mmu-miR-15a* 72399 Brap acuccgucgugUCAUACCGGAc |||||||||| auuuguuaaugAGUAUGGCCUu 2 12 22 43 [mm9:5:122112299-122112320:+] 0.4931 155 7 -16.85 -0.5001 MIMAT0004628 mmu-miR-21* 72399 Brap cugucgggUAGCUG-AC-GACAAc ||:||| || ||||| ugauaguaAUUGACAUGCCUGUUu 2 15 1558 1581 [mm9:5:122113835-122113858:+] 0.5000 121 0 -19.97 -0.4356 MIMAT0004630 mmu-miR-26b* 72399 Brap cucGGUUCAUUACCUCUUGUCc | :|| |:| |||||||| gcaCAGAGAAGUAGAGAACAGa 2 20 1081 1102 [mm9:5:122113358-122113379:+] 0.6039 163 7 -17.17 -0.3069 MIMAT0004630 mmu-miR-26b* 72399 Brap cucggUUCAUUACCUCU-UGUCc ||||:| |||| |||| agaugAAGUGA--GAGACACAGu 2 18 1026 1046 [mm9:5:122113303-122113323:+] 0.6283 122 0 -12.72 -0.2386 MIMAT0004630 mmu-miR-26b* 72399 Brap cuCGGUUCAUUACCUCUU-GUCc ||:|| ||| ||||| ||| auGCUAAUUAA--GAGAAUCAGa 2 21 1503 1523 [mm9:5:122137004-122137024:+] 0.6529 129 0 -11.66 -0.9543 MIMAT0004633 mmu-miR-27a* 72399 Brap acGA-GUGUUC-G-UCGAUUCGGGa || :||||| | | ||||||| acCUGUACAAGACAAAGUAAGCCCa 2 21 1208 1232 [mm9:5:122113485-122113509:+] 0.6435 153 7 -19.88 -0.5931 MIMAT0004635 mmu-miR-92a* 72399 Brap cauUACGGUGGUUAGGGGUGGa || :| : || ||||||| agcAUUUCCUAAAACCCCACCu 2 20 1233 1254 [mm9:5:122136734-122136755:+] 0.5588 155 7 -20.88 -0.6795 MIMAT0004636 mmu-miR-93* 72399 Brap gccCUUCACGAUCG--AGUCGUCa ||| | ||| ||||||| gaaGAAAAG-AAGCCUUCAGCAGc 2 20 1048 1070 [mm9:5:122113325-122113347:+] 0.6039 144 7 -14.74 -0.1767 MIMAT0004636 mmu-miR-93* 72399 Brap gcccuucacGAUCG-AGUCGUCa ||:|| ||||||| cuccagaaaCUGGCUUCAGCAGa 2 14 860 882 [mm9:5:122136361-122136383:+] 0.5826 152 7 -19.79 -0.3131 MIMAT0004636 mmu-miR-93* 72399 Brap gcccuUCACGAUC--GAGUCGUCa || ||| | :||||||| agcacAG-GCUUGUCUUCAGCAGc 2 18 507 529 [mm9:5:122136008-122136030:+] 0.6064 146 7 -16.30 -0.1632 MIMAT0000544 mmu-miR-129-3p 72399 Brap uaCGAAAA--ACCCCAUUCCCGAa || | | | | | ||||||| uuGCAUGUCAUAGAGAAAGGGCUa 2 21 471 494 [mm9:5:122135972-122135995:+] 0.6064 147 7 -10.72 -0.9019 MIMAT0004640 mmu-miR-325 72399 Brap aacuauccuccACGAGUUAUUu | |||||||| aaagcucuccuUACUCAAUAAu 2 12 1396 1417 [mm9:5:122113673-122113694:+] 0.5572 147 7 -8.77 -0.4406 MIMAT0004640 mmu-miR-325 72399 Brap aacuauccUCCACG---AGUUAUUu | |||| ||||||| cauccgaaAUGUGCCUGUCAAUAAg 2 15 601 625 [mm9:5:122136102-122136126:+] 0.6064 145 7 -10.26 -0.1659 MIMAT0000569 mmu-miR-330* 72399 Brap agaGACG-UCCGGGACACGAAACg |||| | ::| ||||||| agaCUGCUCUGAUUUUUGCUUUGa 2 21 1246 1269 [mm9:5:122113523-122113546:+] 0.4644 151 7 -18.86 -0.6099 MIMAT0000569 mmu-miR-330* 72399 Brap agagaCGUCCGGGACACGAA-ACg ||| ||:||||||| || ucaaaGCA--CCUUGUGCUUAUGu 2 19 1512 1533 [mm9:5:122113789-122113810:+] 0.4942 127 0 -19.45 -0.1185 MIMAT0000569 mmu-miR-330* 72399 Brap agAGACGUCCGGGACACG-AAACg |||| | |: :||||| |||| guUCUG-A-GUGUUGUGCGUUUGa 2 22 1358 1379 [mm9:5:122113635-122113656:+] 0.6004 125 0 -20.86 -0.5775 MIMAT0000605 mmu-miR-350 72399 Brap cuuucACAUACCCGAAACACUu | |||| | ||||||| uguucUUUAUGUGAUUUGUGAa 2 18 209 230 [mm9:5:122112486-122112507:+] 0.5115 161 7 -11.36 -0.7592 MIMAT0000605 mmu-miR-350 72399 Brap cuuucacauacccgAAACACUu ||||||| cuuauuuccagcugUUUGUGAu 2 9 984 1005 [mm9:5:122113261-122113282:+] 0.5769 140 7 -7.87 -0.3432 MIMAT0000650 mmu-miR-17* 72399 Brap gaUGUUCACGGGA--GU-GACGUCa |||:| |:|| || |||||| ugACAGGGUCUCUUACAUCUGCAGc 2 21 816 840 [mm9:5:122113093-122113117:+] 0.4997 127 6 -21.27 -0.3204 MIMAT0000650 mmu-miR-17* 72399 Brap gauguUCACGGGAGUGACGUCa || ||| |||||||| agggcAG-GCCAGCACUGCAGa 2 18 1309 1329 [mm9:5:122136810-122136830:+] 0.5588 155 7 -24.20 -0.1061 MIMAT0000650 mmu-miR-17* 72399 Brap gauguucacGGGAGUGACGUCa |: | ||||||| aaaccccacCUGUGACUGCAGa 2 14 1244 1265 [mm9:5:122136745-122136766:+] 0.5588 145 7 -15.87 -0.1374 MIMAT0004662 mmu-miR-139-3p 72399 Brap gagGU-UGUCCCGG-CGC-AGAGGu || ::| |||: ||| ||||| auaCAUGUAAGGCUAGCGCUCUCCc 2 20 141 165 [mm9:5:122112418-122112442:+] 0.4997 121 0 -19.71 -0.1906 MIMAT0004665 mmu-miR-218-1* 72399 Brap ccacGAACUGCCU--UGGUACAAa ||||| ||: |||||||| cagaCUUGAGGGGACACCAUGUUg 2 19 987 1010 [mm9:5:122136488-122136511:+] 0.5537 165 7 -23.06 -0.1402 MIMAT0004670 mmu-miR-7a* 72399 Brap auaccgUCUGACAC---UAAACAAc ||:||| | ||||||| cagcugAGGCUGGGUACAUUUGUUa 2 17 5 29 [mm9:5:122112282-122112306:+] 0.4931 151 7 -12.44 -0.8791 MIMAT0004670 mmu-miR-7a* 72399 Brap auACCGUCUGACACUAAACAAc |||| || | ||||||| ugUGGC-UCCU-UCAUUUGUUg 2 21 111 130 [mm9:5:122135612-122135631:+] 0.6513 148 7 -16.17 -0.2407 MIMAT0004691 mmu-miR-382* 72399 Brap uuuuucacaacaggCACUUACu ||||||| ccgaggagccagugGUGAAUGu 2 9 537 558 [mm9:5:122112814-122112835:+] 0.5323 140 7 -12.29 -0.1146 MIMAT0001094 mmu-miR-412 72399 Brap gccgaucaCCU-GGUCCACUu ||| |||||||| aaaccgcaGGAGCCAGGUGAu 2 13 1541 1561 [mm9:5:122113818-122113838:+] 0.5005 151 7 -19.73 -0.1171 MIMAT0001419 mmu-miR-433* 72399 Brap cuuauuacugucCGAGUGGCAu | ||||||| gccuguguugcuGAUCACCGUc 2 11 1190 1211 [mm9:5:122136691-122136712:+] 0.5588 142 7 -12.62 -0.2783 MIMAT0002105 mmu-miR-464 72399 Brap auagAGUGUCUUAUUUGA-ACCAu || ||:| :|||| |||| uacgUCUGAGGACGAACUGUGGUc 2 20 86 109 [mm9:5:122135587-122135610:+] 0.5990 127 0 -12.87 -0.4226 MIMAT0003409 mmu-miR-467a 72399 Brap gcguAUAUGUACGUC-CGUGAAu ||| || ::| |||||| uauuUAUUCAGUUGGCGCACUUg 2 19 252 274 [mm9:5:122135753-122135775:+] 0.6574 122 6 -12.26 -0.2703 MIMAT0002108 mmu-miR-467a-1* 72399 Brap cacaUCCACACACAUACA-UAUa || || || |||| ||| agagAGCUGCUUGCAUGUCAUAg 2 19 461 483 [mm9:5:122135962-122135984:+] 0.6064 122 0 -4.82 -0.3889 MIMAT0004781 mmu-miR-532-3p 72399 Brap acguucggaACCCACACCCUCc ||| |||||||| gggugcugcUGGAUGUGGGAGg 2 14 574 595 [mm9:5:122112851-122112872:+] 0.5136 157 7 -27.13 -0.1341 MIMAT0003127 mmu-miR-484 72399 Brap uagcccuccccugaCUCGGACu ||||||| uuuagcuucuaaaaGAGCCUGg 2 9 1014 1035 [mm9:5:122136515-122136536:+] 0.5537 140 7 -14.86 -0.3819 MIMAT0003167 mmu-miR-540-3p 72399 Brap gguccuAGC-UGGAGACUGGa |:| || ||||||| cuugucUUGCACAUCUGACCu 2 15 1457 1477 [mm9:5:122136958-122136978:+] 0.6529 149 7 -15.47 -0.3555 MIMAT0003186 mmu-miR-369-3p 72399 Brap uuUCUAGUUGGUACAUAAUAa :|||: |::| |||||| agGGAUUUAUUA-UUAUUAUu 2 20 623 642 [mm9:5:122112900-122112919:+] 0.5068 125 6 -10.53 -0.1008 MIMAT0003186 mmu-miR-369-3p 72399 Brap uuuCUAGUUGGU-ACAU-AAUAa |:|: ||| |||| |||| ugcGGUUUUCCAUUGUAUUUAUu 2 19 237 259 [mm9:5:122135738-122135760:+] 0.7110 121 0 -11.55 -0.3699 MIMAT0004788 mmu-miR-20b* 72399 Brap gaUCUUCACGAGUGU-GACGUCa ||:: ||:||| |||||| acAGGGUCUCUUACAUCUGCAGc 2 21 818 840 [mm9:5:122113095-122113117:+] 0.4997 128 6 -20.05 -0.3204 MIMAT0004788 mmu-miR-20b* 72399 Brap gaUCUUCACGAGUGUGACGUCa :| || || :|||||||| agGGCAG-GCCAGCACUGCAGa 2 21 1309 1329 [mm9:5:122136810-122136830:+] 0.5588 154 7 -20.61 -0.1061 MIMAT0004788 mmu-miR-20b* 72399 Brap gaucuucacGAGUGUGACGUCa || ||||||| aaaccccacCUGUGACUGCAGa 2 14 1244 1265 [mm9:5:122136745-122136766:+] 0.5588 141 7 -11.72 -0.1374 MIMAT0004788 mmu-miR-20b* 72399 Brap gaucuUCACGAGUGUG-ACGUCa ||| |:||| ||||| uauucAGUUGGCGCACUUGCAGu 2 18 256 278 [mm9:5:122135757-122135779:+] 0.6574 121 0 -18.47 -0.3117 MIMAT0004789 mmu-miR-450a-3p 72399 Brap uaCUUACG-UUUCGUA-GGGGUUa ||:| : :|| ||| |||||| ugGAGUUUGGAAACAUACCCCAAg 2 21 271 294 [mm9:5:122112548-122112571:+] 0.4985 127 6 -16.98 -0.2359 MIMAT0003190 mmu-miR-291b-3p 72399 Brap uguuUGUUUUA-CCUACGUGAAa |||| | ||||||| ugucACAAUUUCCCUUGCACUUg 2 19 933 955 [mm9:5:122113210-122113232:+] 0.5013 141 7 -10.26 -0.4303 MIMAT0003736 mmu-miR-670 72399 Brap aagUGGU-GUAUGU-GAGUC-CCUa |:|| |:| || :|||| ||| cugAUCACCGUCCAGUUCAGUGGAa 2 20 1200 1224 [mm9:5:122136701-122136725:+] 0.5588 121 0 -19.67 -0.2713 MIMAT0014815 mmu-miR-3099* 72399 Brap guucccGACCUUCCUUCGACc || | | ||||||| ucugacCUUGCA-GAAGCUGg 2 16 1470 1489 [mm9:5:122136971-122136990:+] 0.6529 145 7 -15.44 -0.1130 MIMAT0014815 mmu-miR-3099* 72399 Brap guUCCCGACCUUC-CU-UCGACc || | | |||| || ||||| gcAGAG-UAGAAGAGAGAGCUGc 2 20 449 470 [mm9:5:122135950-122135971:+] 0.6064 120 0 -13.20 -0.3164 MIMAT0014816 mmu-miR-3099 72399 Brap agGGGUUGGAGAGAGAUCG-GAu | :||||| || ||||| || gaCGUAACCU-UC-CUAGCACUa 2 21 305 325 [mm9:5:122135806-122135826:+] 0.5074 124 0 -21.28 -0.4307 MIMAT0003896 mmu-miR-763 72399 Brap cggugaCCAAGAAGGGUCGACc | || ||:||||||| ccuuagGCUUAUUUCCAGCUGu 2 17 977 998 [mm9:5:122113254-122113275:+] 0.5769 160 7 -19.27 -0.7556 MIMAT0003896 mmu-miR-763 72399 Brap cgGUGACCAAGAAGGGUCGACc ||:| | | |:||||||| gcCAUU-CUGCCUUCCAGCUGg 2 21 200 220 [mm9:5:122135701-122135721:+] 0.7510 154 7 -26.77 -0.2555 MIMAT0004823 mmu-miR-666-3p 72399 Brap ucGUCC--GCUAGUG-CGACGUCGg |||| | |:|| ||||||| gaCAGGGUCUCUUACAUCUGCAGCu 2 21 817 841 [mm9:5:122113094-122113118:+] 0.4997 150 7 -21.43 -0.4058 MIMAT0003897 mmu-miR-759 72399 Brap caguuuuAACA-AACGUG-AGACg |||| |||||| |||| gcccugcUUGUCUUGCACAUCUGa 2 16 1451 1474 [mm9:5:122136952-122136975:+] 0.6529 130 0 -15.86 -0.2056 MIMAT0003741 mmu-miR-674* 72399 Brap aaCAAGACU-C--UACCCUCGACAc |||:| | | | | ||||||| auGUUUUUACGCAAAGAGAGCUGUa 2 21 733 757 [mm9:5:122113010-122113034:+] 0.4975 150 7 -12.77 -0.7279 MIMAT0003459 mmu-miR-682 72399 Brap gucUGAAGU-GACACUGACGUc || || ||||||||||| aaaACCCCACCUGUGACUGCAg 2 19 1243 1264 [mm9:5:122136744-122136765:+] 0.5588 165 7 -25.87 -0.1101 MIMAT0003462 mmu-miR-684 72399 Brap aacugaacuucCCUUUUGa ||||||| aaaauguuccaGGAAAACa 2 9 1695 1713 [mm9:5:122137196-122137214:+] 0.5664 140 7 -7.56 -1.1354 MIMAT0003470 mmu-miR-691 72399 Brap aaaagacggagagaaGUCCUUa |||||| cuuuuaaaaauguucCAGGAAa 2 8 1689 1710 [mm9:5:122137190-122137211:+] 0.5664 120 6 -7.86 -0.1946 MIMAT0003472 mmu-miR-693-5p 72399 Brap cuUUUGAAAGC-CUACACCGAc :|||| | | |||||||| acGAACUGUGGUCAUGUGGCUc 2 20 97 118 [mm9:5:122135598-122135619:+] 0.6252 158 7 -18.15 -0.2400 MIMAT0004189 mmu-miR-693-3p 72399 Brap aaugUCGGUGUAGACU-UUCGACg || :| ||||| |||||| aucgAGAGGCCUCUGACAAGCUGa 2 20 710 733 [mm9:5:122136211-122136234:+] 0.6064 131 6 -18.97 -0.2744 MIMAT0003474 mmu-miR-694 72399 Brap gaagucCGUUGUAAAAGUc || | ||||||| ugaucuGCUA-AUUUUCAc 2 14 1002 1019 [mm9:5:122113279-122113296:+] 0.5800 143 7 -6.27 -0.4798 MIMAT0003474 mmu-miR-694 72399 Brap gaAGUCCGUUGUA-AAAGUc |:: | |:||| ||||| auUUGUGAAGCAUAUUUCAu 2 18 222 241 [mm9:5:122112499-122112518:+] 0.5115 121 0 -6.69 -0.4433 MIMAT0003493 mmu-miR-703 72399 Brap aaGAAA-GGAAGAC---UUCCAAAa |||| :| || | ||||||| ugCUUUAUCAUCAGCCAAAGGUUUa 2 20 1076 1100 [mm9:5:122136577-122136601:+] 0.5537 149 7 -9.42 -0.9087 MIMAT0003494 mmu-miR-704 72399 Brap gauCCUCGUCUCGUGUACAGa ||| :: ||||||| accGGAAUGUCUGACAUGUCa 2 19 1162 1182 [mm9:5:122136663-122136683:+] 0.5588 142 7 -11.32 -0.1922 MIMAT0003495 mmu-miR-705 72399 Brap acggGUGGGGUGGAGGGUGg :|:: | |||||||| caaaUAUUGC-CCUCCCACc 2 17 664 682 [mm9:5:122112941-122112959:+] 0.4975 146 7 -24.38 -0.1351 MIMAT0003496 mmu-miR-706 72399 Brap aaaaaacucuguccCAAAGAGa ||||||| aaugcaauguuguaGUUUCUCu 2 9 912 933 [mm9:5:122113189-122113210:+] 0.5013 140 7 -10.18 -0.5156 MIMAT0003500 mmu-miR-710 72399 Brap gaguugagagggguUCUGAACc ||||||| cagauuaauugaacAGACUUGa 2 9 974 995 [mm9:5:122136475-122136496:+] 0.5537 140 7 -10.94 -0.5261 MIMAT0003505 mmu-miR-714 72399 Brap cgCUGGCUGGCCGGGAGCAGc |||:|||:|| ||||||| ccGACUGACUGGACCUCGUCc 2 20 1137 1157 [mm9:5:122136638-122136658:+] 0.5537 179 7 -36.91 -0.2541 MIMAT0003510 mmu-miR-717 72399 Brap ucucuuccauagagACAGACUc ||||||| uccuuugaccggaaUGUCUGAc 2 9 1155 1176 [mm9:5:122136656-122136677:+] 0.5563 140 7 -11.48 -0.1583 MIMAT0004838 mmu-miR-742* 72399 Brap acUAAUCGUUGGUACAC-UCAu :||: ||:|::|||| ||| caGUUGACAGCUGUGUGUAGUa 2 20 1037 1058 [mm9:5:122136538-122136559:+] 0.5537 131 0 -17.90 -0.4313 MIMAT0004237 mmu-miR-742 72399 Brap aaAUG-GGUCGUAC-CACCGAAAg |:| ||| :| | ||||||| ugUGCACCAUUAGGCCUGGCUUUu 2 21 1661 1684 [mm9:5:122113938-122113961:+] 0.5000 150 7 -16.95 -0.1673 MIMAT0004238 mmu-miR-743a 72399 Brap agaUGAGUCGAACCACAGAAAg :| :| :| ||||||| gaaGCAUAUUUCAUUGUCUUUu 2 20 228 249 [mm9:5:122112505-122112526:+] 0.5050 143 7 -7.25 -0.8324 MIMAT0004238 mmu-miR-743a 72399 Brap agauGAGUCG-AACCAC-AGAAAg | |||| | ||| ||||| ucccCCCAGCACUUGUGUUCUUUa 2 19 194 217 [mm9:5:122112471-122112494:+] 0.5115 121 0 -11.40 -0.5595 MIMAT0004840 mmu-miR-743b-3p 72399 Brap agAUAAGUCGUACUACAGAAAg ||||: ||| ||||||| caUAUUU--CAU--UGUCUUUu 2 21 232 249 [mm9:5:122112509-122112526:+] 0.5050 150 7 -8.93 -0.8047 MIMAT0004840 mmu-miR-743b-3p 72399 Brap agauaaGUCGU-ACUAC-AGAAAg ||||| | :|| ||||| ucccccCAGCACUUGUGUUCUUUa 2 17 194 217 [mm9:5:122112471-122112494:+] 0.5115 123 0 -11.69 -0.5631 MIMAT0004841 mmu-miR-871 72399 Brap guACUGACCGUGAUUAGACU-UAu |||| || |: :||||| || uuUGACCGGAAU--GUCUGACAUg 2 22 1158 1179 [mm9:5:122136659-122136680:+] 0.5588 122 0 -13.77 -0.1933 MIMAT0004844 mmu-miR-880 72399 Brap agaUGAGUCUCUCCUACCUCAu :||::|:| ||||||| cugGCUUGGGGCAAAUGGAGUa 2 20 530 551 [mm9:5:122136031-122136052:+] 0.6064 155 7 -19.78 -0.5939 MIMAT0004846 mmu-miR-881 72399 Brap agaUAAGUC-UUUUCUGUGUCAa || || :|:||||||||| aagAUGAAGUGAGAGACACAGUg 2 20 1025 1047 [mm9:5:122113302-122113324:+] 0.6283 162 7 -19.53 -0.2178 MIMAT0004848 mmu-miR-883a-5p 72399 Brap cauuGA-CGAUGAAGAGAGUCGu || ||| || ||||||| cuucCUGGCUCCU--UCUCAGCu 2 19 632 652 [mm9:5:122136133-122136153:+] 0.6064 150 7 -15.56 -0.1315 MIMAT0004848 mmu-miR-883a-5p 72399 Brap caUUGACGAUGAAG-AG-AGUCGu | :| :|:|||: || ||||| uaAUUUUUUGCUUUAUCAUCAGCc 2 21 1068 1091 [mm9:5:122136569-122136592:+] 0.5537 123 0 -13.92 -0.9334 MIMAT0004849 mmu-miR-883a-3p 72399 Brap uaUGACUCUCGACAACGUCAAu | | :| || |||||||| ucAGUUGGCGCACUUGCAGUUg 2 21 259 280 [mm9:5:122135760-122135781:+] 0.6574 156 7 -15.21 -0.1854 MIMAT0004851 mmu-miR-883b-3p 72399 Brap uaUGACUCUCUACAACGUCAAu | | :| | |||||||| ucAGUUGGCGCACUUGCAGUUg 2 21 259 280 [mm9:5:122135760-122135781:+] 0.6574 148 7 -13.39 -0.1871 MIMAT0004856 mmu-miR-105 72399 Brap ugGUGUUCGUAGACUCGUGAACc ||||| : | ||||||| guCACAAUUUCCCUUGCACUUGa 2 22 934 956 [mm9:5:122113211-122113233:+] 0.5013 153 7 -16.85 -0.9500 MIMAT0004856 mmu-miR-105 72399 Brap ugguguucguagacUCGUGAACc |||||||| ugcuuuuuccccccAGCACUUGu 2 10 187 209 [mm9:5:122112464-122112486:+] 0.5115 145 7 -11.23 -0.3309 MIMAT0004856 mmu-miR-105 72399 Brap ugGUGUUCGU-AGACUCGU-GAACc || ||| | || |||| |||| aaCAAAAGGAGUCAAAGCACCUUGu 2 22 1501 1525 [mm9:5:122113778-122113802:+] 0.4942 128 0 -13.75 -0.1042 MIMAT0004856 mmu-miR-105 72399 Brap ugguguucGUAGACU-CGUGAACc || :||: ||||||| uauuuauuCAGUUGGCGCACUUGc 2 16 252 275 [mm9:5:122135753-122135776:+] 0.6574 150 7 -14.60 -0.1494 MIMAT0004870 mmu-miR-453 72399 Brap acguucGAGUGAUACUCCGUUGGa ||: :| | ||||||| gauuucCUUCUUCAGUGGCAACCc 2 19 1155 1178 [mm9:5:122113432-122113455:+] 0.7986 150 7 -14.62 -0.8840 MIMAT0004882 mmu-miR-466f-3p 72399 Brap cacacauacacacACACAUac |||||| acaaaaaucaagaUGUGUAaa 3 9 1711 1731 [mm9:5:122137212-122137232:+] 0.5630 120 0 -5.31 -0.2084 MIMAT0004883 mmu-miR-466g 72399 Brap acacACACGUACACAGACAUa ||||| | |||||||| accuUGUGCUUAUGUCUGUAc 2 18 1519 1539 [mm9:5:122113796-122113816:+] 0.5011 169 7 -17.58 -0.3522 MIMAT0004883 mmu-miR-466g 72399 Brap acACACAC-GUACACAGACAUa | || | || | ||||||| ugUUUGAGACAAG-GUCUGUAa 2 20 1637 1657 [mm9:5:122113914-122113934:+] 0.5000 148 7 -12.06 -0.3564 MIMAT0004885 mmu-miR-467c 72399 Brap guguAUAUGU-ACGUGCGUGAAu ||| || | :||||||| uauuUAUUCAGUUGGCGCACUUg 2 19 252 274 [mm9:5:122135753-122135775:+] 0.6574 153 7 -14.37 -0.1539 MIMAT0004886 mmu-miR-467d 72399 Brap gcguAUAUGU-ACGCGCGUGAAu ||| || | |||||||| uauuUAUUCAGUUGGCGCACUUg 2 19 252 274 [mm9:5:122135753-122135775:+] 0.6574 157 7 -17.97 -0.1539 MIMAT0004887 mmu-miR-467d* 72399 Brap cacaUCCACACACAUACA-UAUa || || || |||| ||| agagAGCUGCUUGCAUGUCAUAg 2 19 461 483 [mm9:5:122135962-122135984:+] 0.6064 122 0 -4.82 -0.3889 MIMAT0004890 mmu-miR-509-5p 72399 Brap uaCUAACG-GUGUAAGACCUCAu |:|| : :| | ||||||| agGGUUAUGUAAACCCUGGAGUu 2 21 255 277 [mm9:5:122112532-122112554:+] 0.4985 147 7 -14.98 -0.1949 MIMAT0004897 mmu-miR-654-5p 72399 Brap ugUGU-ACAAGACGUC-GAAUGGu ||| ||| | ||| |||||| acACACUGU--UACAGUCUUACCg 2 21 1424 1445 [mm9:5:122136925-122136946:+] 0.6529 124 6 -22.51 -0.1929 MIMAT0004932 mmu-miR-878-5p 72399 Brap acagaacuguaggUUGAUCUAu |||||||| guaauacaggagaAACUAGAUu 2 10 311 332 [mm9:5:122112588-122112609:+] 0.4976 145 7 -11.16 -0.3562 MIMAT0004934 mmu-miR-872 72399 Brap ggACUUGAUUGUUCAUUGGAa ||| |:|| ||||||| uaUGACAUGAC--GUAACCUu 2 20 297 315 [mm9:5:122135798-122135816:+] 0.5074 152 7 -13.35 -0.1489 MIMAT0004935 mmu-miR-872* 72399 Brap uccuccGAUGACGU--UAUCAAGu | |||| : ||||||| cucuccCAACUGAGGUAUAGUUCc 2 17 159 182 [mm9:5:122112436-122112459:+] 0.5056 147 7 -12.60 -0.1410 MIMAT0004938 mmu-miR-875-3p 72399 Brap guaUCGGAGUCAUAAAAGUCc || :|||| ||||||| ggaAGGUUCAG--UUUUCAGa 2 19 502 520 [mm9:5:122112779-122112797:+] 0.5510 155 7 -15.88 -0.1994 MIMAT0004942 mmu-miR-598 72399 Brap auugcuacUGCUGCUACUGCAu |:||| ||||||| guaaaucuAUGAC-AUGACGUa 2 15 290 310 [mm9:5:122135791-122135811:+] 0.5556 152 7 -17.96 -0.4533 MIMAT0005291 mmu-miR-582-5p 72399 Brap ucaUUGACCAACUUGU-UGACAu ||| ||| ||| ||||| uagAACGCGUU--ACACACUGUu 2 20 1413 1433 [mm9:5:122136914-122136934:+] 0.6529 120 0 -11.10 -0.4588 MIMAT0005292 mmu-miR-582-3p 72399 Brap aacccaagucaaCAAGUUGUCc ||||||||| ccaaaccgaacaGUUCAACAGu 2 11 776 797 [mm9:5:122113053-122113074:+] 0.4993 150 7 -12.96 -0.4080 MIMAT0005294 mmu-miR-467e* 72399 Brap uaUAUCCACACACAUACA-UAUa | || || || |||| ||| agAGAGCUGCUUGCAUGUCAUAg 2 21 461 483 [mm9:5:122135962-122135984:+] 0.6064 124 0 -4.82 -0.3889 MIMAT0005830 mmu-miR-466l 72399 Brap uuAUACACACGU-ACAUAAAUAu ||| | | | ||||||| auUAUUAUUAAAUUUUAUUUAUu 2 21 634 656 [mm9:5:122112911-122112933:+] 0.4988 143 7 -2.38 -1.0594 MIMAT0005830 mmu-miR-466l 72399 Brap uuauacACACGU-ACAUAAAUAu | | || ||||||||| ugcgguUUUCCAUUGUAUUUAUu 2 17 237 259 [mm9:5:122135738-122135760:+] 0.7110 155 7 -8.82 -0.4194 MIMAT0005834 mmu-miR-466i 72399 Brap aucacacauacacACACACAUa |||||||| ggcaguugacagcUGUGUGUAg 2 10 1035 1056 [mm9:5:122136536-122136557:+] 0.5537 145 7 -11.42 -0.3558 MIMAT0005834 mmu-miR-466i 72399 Brap aucacacauacacacACACAUa |||||| aaacaaaaaucaagaUGUGUAa 2 8 1709 1730 [mm9:5:122137210-122137231:+] 0.5630 120 6 -5.96 -0.1849 MIMAT0005836 mmu-miR-1186 72399 Brap guACG-GAAAUUAAGGUCGUGAg ||| :||| |||||||| caUGCUUUUUCCCCCCAGCACUu 2 21 185 207 [mm9:5:122112462-122112484:+] 0.5115 155 7 -25.19 -0.1514 MIMAT0005853 mmu-miR-669e 72399 Brap uacUUGUACGUG--UGUGUUCUGu | :|||||| ::||||||| ggcAUUAUGCACCUGUACAAGACa 2 20 1198 1221 [mm9:5:122113475-122113498:+] 0.7986 162 7 -21.58 -1.0984 MIMAT0005857 mmu-miR-1196 72399 Brap uccgucuCCGUC-CAUCUAAa | ||| ||||||| ugcguuuGACAGUGUAGAUUg 2 14 1371 1391 [mm9:5:122113648-122113668:+] 0.6004 148 7 -13.72 -0.1853 MIMAT0005858 mmu-miR-1197 72399 Brap ucUUCAUCUGG--UACACAGGAu |:||| ||: : ||||||| ucAGGUA-ACUGAGAGUGUCCUc 2 20 652 673 [mm9:5:122136153-122136174:+] 0.6064 148 7 -14.57 -0.1648 MIMAT0007864 mmu-miR-1897-5p 72399 Brap ggGGGAGAAAGAGGUAGGUUUc ||| |||||||||||| gcCCCAGAGUCUCCAUCCAAAc 2 21 1120 1141 [mm9:5:122113397-122113418:+] 0.7986 168 7 -30.05 -0.2949 MIMAT0007864 mmu-miR-1897-5p 72399 Brap gggggAGAAAGAGGU-AGGUUUc |:| |:| || |||||| uuuuaUUUAUUUACAUUCCAAAu 2 18 646 668 [mm9:5:122112923-122112945:+] 0.4988 125 6 -6.78 -0.6606 MIMAT0007873 mmu-miR-1896 72399 Brap gaggaguGGGUGGUAGUCUCUc :| ::: ||||||| ggaagguUCAGUUUUCAGAGAg 2 16 502 523 [mm9:5:122112779-122112800:+] 0.5510 143 7 -18.14 -0.1498 MIMAT0007873 mmu-miR-1896 72399 Brap gaggaguggguGGUAGUCUCUc |||||||||| -----------CCAUCAGAGAc 2 12 1 11 [mm9:5:122135502-122135512:+] 0.6567 155 7 -15.80 -0.4478 MIMAT0007878 mmu-miR-1894-3p 72399 Brap gaGGGA-AGUGGGAGAGGGAACg |:|| |||| |:||||||| uuCUCUGUCACAAUUUCCCUUGc 2 21 928 950 [mm9:5:122113205-122113227:+] 0.5013 167 7 -31.33 -0.5549 MIMAT0009394 mmu-miR-1931 72399 Brap cgGUAGCGUGGUCGGGAACGUa ::|| || : |||||||| ucUGUCACAAUUUCCCUUGCAc 2 21 931 952 [mm9:5:122113208-122113229:+] 0.5013 156 7 -19.79 -0.3710 MIMAT0009394 mmu-miR-1931 72399 Brap cgguaGCGUGGUCGGGAACGUa | ||:| | ||||||| ucuugCACAUCUGACCUUGCAg 2 18 1461 1482 [mm9:5:122136962-122136983:+] 0.6529 157 7 -19.81 -0.2521 MIMAT0009402 mmu-miR-1938 72399 Brap cuGGCUUGAUGUU--CAGGGUGGc :| || ||: : ||||||| auUCCAAAUAUUGCCCUCCCACCc 2 21 660 683 [mm9:5:122112937-122112960:+] 0.4975 143 7 -17.25 -0.1420 MIMAT0009407 mmu-miR-1942 72399 Brap guuggucuacuucUGUAGACu ||||||| gacagggucucuuACAUCUGc 2 9 817 837 [mm9:5:122113094-122113114:+] 0.4997 140 7 -15.17 -0.1228 MIMAT0009407 mmu-miR-1942 72399 Brap guuggucuacuucUGUAGACu ||||||| cugcuugucuugcACAUCUGa 2 9 1454 1474 [mm9:5:122136955-122136975:+] 0.6529 140 7 -11.25 -0.2506 MIMAT0009409 mmu-miR-1944 72399 Brap uuaGUCUUGAACUGUAAGUCGUGUCUc ||| | || | || ||||||| cagCAGCCCCUGUC--UCUGCACAGAg 2 25 1064 1088 [mm9:5:122113341-122113365:+] 0.6039 157 7 -20.91 -0.2174 MIMAT0009413 mmu-miR-1947 72399 Brap gucgUGAGUCGAUC--GAGCAGGa ||| | ||:| ||||||| uccgACUGA-CUGGACCUCGUCCu 2 19 1136 1158 [mm9:5:122136637-122136659:+] 0.5537 151 7 -21.40 -0.2230 MIMAT0009421 mmu-miR-669o 72399 Brap ugUAUUUGUACGUGUGUGUUGAu |||::::|| :: ||||||| gcAUAGGUGUG-GU-CACAACUg 2 22 482 502 [mm9:5:122112759-122112779:+] 0.5510 153 7 -22.17 -0.1002 MIMAT0009425 mmu-miR-1954 72399 Brap uuGUCCCAGAG--UG-AGACGUCa ||||||||| || ||||||| gaCAGGGUCUCUUACAUCUGCAGc 2 20 817 840 [mm9:5:122113094-122113117:+] 0.4997 173 7 -32.69 -0.2629 MIMAT0009431 mmu-miR-1958 72399 Brap ugaaUGACGAAGGU--GAAAGGAu ||||| : ||||||| gcccACUGCAGAAGGUCUUUCCUg 2 19 403 426 [mm9:5:122135904-122135927:+] 0.6064 141 7 -17.22 -0.1129 MIMAT0009435 mmu-miR-1962 72399 Brap uacacaggGUCACGGUCG-GAGa ||||| |||| ||| agggaagaCAGUGACAGCUCUCu 2 15 562 584 [mm9:5:122136063-122136085:+] 0.6064 126 0 -20.94 -0.4407 MIMAT0009455 mmu-miR-1983 72399 Brap ucUUU--UGUACGAGGUCCACUc ||| :|| | |||||||| cuAAACCGCAGGAGCCAGGUGAu 2 20 1539 1561 [mm9:5:122113816-122113838:+] 0.5005 154 7 -17.09 -0.1159 MIMAT0009459 mmu-miR-1982* 72399 Brap ggagggguccUGGGAGGGUu :|||||||| uccaaauauuGCCCUCCCAc 2 11 662 681 [mm9:5:122112939-122112958:+] 0.4975 146 7 -21.15 -0.1622 MIMAT0009460 mmu-miR-1982.1 72399 Brap gacACCCUCUUGUA----UCCCACUCu ||| || || | |||||||| gguUGGCAGCACUUCCCAAGGGUGAGu 2 21 164 190 [mm9:5:122135665-122135691:+] 0.5722 155 7 -20.40 -0.1081 MIMAT0009461 mmu-miR-1982.2 72399 Brap gacacccUCUUGUAUCC-CACu | |:|||||| ||| ugcaucuAUAGCAUAGGUGUGg 2 15 472 493 [mm9:5:122112749-122112770:+] 0.5510 122 0 -15.98 -0.2840 MIMAT0011210 mmu-miR-2134 72399 Brap cgugggGCAAAGGGUUCUg | | ||||||| uggaaaCAUACCCCAAGAc 2 14 278 296 [mm9:5:122112555-122112573:+] 0.4985 141 7 -14.88 -0.2512 MIMAT0011217 mmu-miR-2141 72399 Brap uugaaaagacuGUGGAGGa ||||||| cuugcuacguuCACCUCCu 2 9 52 70 [mm9:5:122112329-122112347:+] 0.4964 140 7 -16.04 -0.1570 MIMAT0011217 mmu-miR-2141 72399 Brap uugaAAAGACU-GUGG-AGGa || |||| |||| ||| ugugUUGCUGAUCACCGUCCa 2 16 1193 1213 [mm9:5:122136694-122136714:+] 0.5588 122 0 -15.80 -0.2588 MIMAT0011222 mmu-miR-2146 72399 Brap guGUACCUUGGGAAGAGGUg || |: : |||||||| uuCAAAGGCUGCUUCUCCAg 2 19 846 865 [mm9:5:122136347-122136366:+] 0.5826 150 7 -15.31 -0.2289 MIMAT0014852 mmu-miR-3072* 72399 Brap ggACGGGAGGGAGCCCCA--GGGa ||||:||| | |||| ||| ucUGCCUUCCAGCUGGGUAGCCCc 2 21 205 228 [mm9:5:122135706-122135729:+] 0.7510 120 0 -32.60 -0.1445 MIMAT0015641 mmu-miR-3470b 72399 Brap ggucggaccagaUGUCUCACu |||||||| gagaaguagagaACAGAGUGa 2 10 1086 1106 [mm9:5:122113363-122113383:+] 0.6039 145 7 -16.84 -0.3719 MIMAT0015641 mmu-miR-3470b 72399 Brap ggucGGAC-CAGAUGUCUCACu |||| | ||:||||||| cccaCCUGUGACUGCAGAGUGa 2 18 1248 1269 [mm9:5:122136749-122136770:+] 0.5588 164 7 -30.31 -0.1526 MIMAT0015643 mmu-miR-3472 72399 Brap ccAAGGAAGGUCGAAGA--CCG-AUAAu ||:||| :||| || ||| |||| acUUUCUU-AGGCUCCUUAGGCUUAUUu 2 24 964 990 [mm9:5:122113241-122113267:+] 0.5738 128 0 -15.48 -0.2207 MIMAT0000123 mmu-miR-1 72399 Brap uauguAUGAAGAAAUGUAAGGu ||:|| |||||||||| aauuuUAUUUAUUUACAUUCCa 2 18 644 665 [mm9:5:122112921-122112942:+] 0.4988 173 7 -16.90 -1.2241 MIMAT0000128 mmu-miR-30a 72399 Brap gaaGGUCAGCU---CCU-ACAAAUGu :|||| || || ||||||| gggUCAGUGGAUACUGACUGUUUACa 2 20 750 775 [mm9:5:122136251-122136276:+] 0.6064 149 7 -17.65 -0.2406 MIMAT0000130 mmu-miR-30b 72399 Brap ucgACUCAC--AU-CCU-ACAAAUGu | |||| || || ||||||| gggUCAGUGGAUACUGACUGUUUACa 2 20 750 775 [mm9:5:122136251-122136276:+] 0.6064 148 7 -15.90 -0.2363 MIMAT0000133 mmu-miR-101a 72399 Brap aagucaauAGUGUCAUGACAu |:| :||||||| uacugcccUUA-GGUACUGUg 2 14 1329 1348 [mm9:5:122113606-122113625:+] 0.5516 143 7 -11.67 -0.1041 MIMAT0000141 mmu-miR-130a 72399 Brap uacGGGAAAAUUGUAACGUGAc | | || | ||||||| uguCACAAUUUCCCUUGCACUu 2 20 933 954 [mm9:5:122113210-122113231:+] 0.5013 147 7 -11.95 -0.2416 MIMAT0000142 mmu-miR-9 72399 Brap aguaUGUCGA-UCUAUUGGUU-UCu |:| :| | ||:||||| || uacaAUAUUUAAUAUGACCAACAGa 2 20 901 925 [mm9:5:122136402-122136426:+] 0.5537 122 0 -12.16 -0.2615 MIMAT0000144 mmu-miR-132 72399 Brap gcuGGUACCGACAUCUGACAAu | :||| | ||||||| gguCAGUGGAUACUGACUGUUu 2 20 751 772 [mm9:5:122136252-122136273:+] 0.6064 151 7 -18.22 -0.1759 MIMAT0000147 mmu-miR-135a 72399 Brap aguguauccuuaUUUUUCGGUAu ||| |||||| agagccucuuccAAACAGCCAUa 2 12 880 902 [mm9:5:122136381-122136403:+] 0.5682 123 6 -9.66 -0.1267 MIMAT0000148 mmu-miR-136 72399 Brap gguaguAGUUUUGUUUACCUCa |:::::||||||||| ccuggcUUGGGGCAAAUGGAGu 2 17 529 550 [mm9:5:122136030-122136051:+] 0.6064 160 7 -20.11 -0.3670 MIMAT0000150 mmu-miR-138 72399 Brap gccGGACUA--AGUGUU--GU-GGUCGa ||| | |||||| || ||||| uccCCUUUUCAUCACAACCCACCCAGCa 2 21 1543 1570 [mm9:5:122137044-122137071:+] 0.6529 122 0 -18.66 -0.1393 MIMAT0000157 mmu-miR-145 72399 Brap ucccuaaggACC-CUUUUGACCUg ||| | ||||||| gcauaggugUGGUCACAACUGGAa 2 15 482 505 [mm9:5:122112759-122112782:+] 0.5510 145 7 -14.79 -0.4694 MIMAT0000158 mmu-miR-146a 72399 Brap uuggguacCUUAAGUCAA-GAGu || ||||||| ||| cuugggcaGAUUUCAGUUACUCu 2 15 812 834 [mm9:5:122136313-122136335:+] 0.5920 126 0 -14.03 -0.6627 MIMAT0000159 mmu-miR-149 72399 Brap cccucacUUCUGUG-CCUCGGUCu || |:| |||||||| cuguacuAAACCGCAGGAGCCAGg 2 17 1534 1557 [mm9:5:122113811-122113834:+] 0.5005 151 7 -21.62 -0.1134 MIMAT0000159 mmu-miR-149 72399 Brap cccucacuucugugcCUCGGUCu ||||||| gugugccucucuuuaGAGCCAGg 2 9 932 954 [mm9:5:122136433-122136455:+] 0.5537 140 7 -16.24 -0.5193 MIMAT0000165 mmu-miR-155 72399 Brap ugGGGAUAGUGUUAA--UCGUAAUu | ||| : |||| ||||||| agCACUAAAGGAAUUCCAGCAUUAa 2 22 319 343 [mm9:5:122135820-122135844:+] 0.5074 156 7 -12.28 -0.2059 MIMAT0000208 mmu-miR-10b 72399 Brap guguuUAAGCCAAGA---UGUCCCAu :|| ||||:| ||||||| gguuuGUUGGGUUUUGUGACAGGGUc 2 19 800 825 [mm9:5:122113077-122113102:+] 0.4997 157 7 -19.07 -0.1721 MIMAT0000208 mmu-miR-10b 72399 Brap gugUUUAAGCCAAGAUG-UCCCAu |:|||: ||:||| ||||| aagAGAUUU--UUUUACAAGGGUa 2 21 704 725 [mm9:5:122112981-122113002:+] 0.4975 129 0 -16.39 -0.6709 MIMAT0000210 mmu-miR-181a 72399 Brap ugAGUGGCUGUCGCA-ACU-UACAa | ||||: | :|| ||| |||| uuUGACCGG-AAUGUCUGACAUGUc 2 22 1158 1181 [mm9:5:122136659-122136682:+] 0.5588 122 0 -16.14 -0.1212 MIMAT0000224 mmu-miR-194 72399 Brap agguguaccucaacGACAAUGu ||||||| gaacgcguuacacaCUGUUACa 2 9 1415 1436 [mm9:5:122136916-122136937:+] 0.6529 140 7 -15.82 -0.7756 MIMAT0000239 mmu-miR-206 72399 Brap gguguGUGAAGGAAUGUAAGGu :|:|| :||||||||| aauuuUAUUUAUUUACAUUCCa 2 18 644 665 [mm9:5:122112921-122112942:+] 0.4988 165 7 -17.76 -1.2255 MIMAT0000248 mmu-miR-30e 72399 Brap gaagGUCAGUUCCU-ACAAAUGu ::| :| || ||||||| ucagUGGAUACUGACUGUUUACa 2 19 753 775 [mm9:5:122136254-122136276:+] 0.6064 145 7 -14.52 -0.2385 MIMAT0000366 mmu-miR-290-5p 72399 Brap uuucACGGGGGUAUCAAACUCa ||::: : | ||||||| uguuUGUUUGU-UUGUUUGAGa 2 19 1625 1645 [mm9:5:122113902-122113922:+] 0.5000 144 7 -11.47 -0.8643 MIMAT0000366 mmu-miR-290-5p 72399 Brap uuuCA-CGGGGGUAUCAA-ACUCa || | |: || |||| |||| acuGUGGACUACAGAGUUCUGAGu 2 20 1343 1366 [mm9:5:122113620-122113643:+] 0.5760 122 0 -14.32 -0.1333 MIMAT0000368 mmu-miR-291a-3p 72399 Brap cguguguuucaccuUCGUGAAa ||||||| ugcuuuuuccccccAGCACUUg 2 9 187 208 [mm9:5:122112464-122112485:+] 0.5115 140 7 -9.84 -0.1173 MIMAT0000369 mmu-miR-292-5p 72399 Brap guuuucucggggguCAAACUCa ||||||| uuguuuguuuguuuGUUUGAGa 2 9 1624 1645 [mm9:5:122113901-122113922:+] 0.5000 140 7 -9.57 -0.8608 MIMAT0000372 mmu-miR-294 72399 Brap uguguguuuucccuUCGUGAAa ||||||| ugcuuuuuccccccAGCACUUg 2 9 187 208 [mm9:5:122112464-122112485:+] 0.5115 140 7 -7.90 -0.1173 MIMAT0000373 mmu-miR-295 72399 Brap ucugaguuuucaucaUCGUGAAa ||||||| augcuuuuuccccccAGCACUUg 2 9 186 208 [mm9:5:122112463-122112485:+] 0.5115 140 7 -9.22 -0.1185 MIMAT0004576 mmu-miR-296-3p 72399 Brap ccucucGGAGGUGG--GUUGGGAg :||:|| : ||||||| uuuccuUCUUCAGUGGCAACCCUu 2 17 1157 1180 [mm9:5:122113434-122113457:+] 0.7986 147 7 -19.20 -0.5199 MIMAT0000379 mmu-miR-301a 72399 Brap cgAAACUGUU-AUGAUAACGUGAc | | |||| | | ||||||| ucUGUCACAAUUUCCCUUGCACUu 2 22 931 954 [mm9:5:122113208-122113231:+] 0.5013 156 7 -13.72 -0.2352 MIMAT0000380 mmu-miR-302a 72399 Brap agugguuuuguaccuUCGUGAAu ||||||| augcuuuuuccccccAGCACUUg 2 9 186 208 [mm9:5:122112463-122112485:+] 0.5115 140 7 -12.43 -0.1161 MIMAT0000387 mmu-miR-130b 72399 Brap uacgggAAAGUAGUAACGUGAc |||| | ||||||| ucacaaUUUC--CCUUGCACUu 2 17 935 954 [mm9:5:122113212-122113231:+] 0.5013 149 7 -11.95 -0.2373 MIMAT0000513 mmu-miR-19b 72399 Brap agUCAAAACGUACC-UAA-ACGUGu | | | || || ||| ||||| gaAAUAGUCCACGGCAUUAUGCACc 2 22 1186 1210 [mm9:5:122113463-122113487:+] 0.7986 120 0 -11.14 -0.8705 MIMAT0000514 mmu-miR-30c 72399 Brap cgACUCUCACAU-CCU-ACAAAUGu | || | || || ||||||| ggUCAGUGGAUACUGACUGUUUACa 2 22 751 775 [mm9:5:122136252-122136276:+] 0.6064 147 7 -15.90 -0.2363 MIMAT0000515 mmu-miR-30d 72399 Brap gaaggucagcccCU-ACAAAUGu || ||||||| ucaguggauacuGACUGUUUACa 2 11 753 775 [mm9:5:122136254-122136276:+] 0.6064 141 7 -15.76 -0.2385 MIMAT0000517 mmu-miR-192 72399 Brap ccgACAGUUAAG-UAUCCAGUc |||:| ||: | |||||| aaaUGUUAUUUUAAAAGGUCAa 2 19 1734 1755 [mm9:5:122137235-122137256:+] 0.5630 133 6 -12.58 -0.3978 MIMAT0000528 mmu-miR-18a 72399 Brap gauagaCGUGAUCUACGUGGAAu | | | | ||||||| acaaaaGGAGUCAAAGCACCUUg 2 18 1502 1524 [mm9:5:122113779-122113801:+] 0.4942 145 7 -13.20 -0.2122 MIMAT0000533 mmu-miR-26a 72399 Brap ucggauAGGACCUAAUGAACUu |:| | ||||||| agagguUUCCAAACUACUUGAa 2 17 1664 1685 [mm9:5:122137165-122137186:+] 0.5698 144 7 -13.41 -0.5156 MIMAT0000534 mmu-miR-26b 72399 Brap uggauAGGACUUAAUGAACUu |:| || ||||||| gagguUUCCAAACUACUUGAa 2 17 1665 1685 [mm9:5:122137166-122137186:+] 0.5698 152 7 -10.31 -0.5156 MIMAT0000559 mmu-miR-326 72399 Brap ugAC-CUCCUUCCCGGGUCUCc || || | | ||||||| ucUGUGAACACAGCCCCAGAGu 2 20 1108 1129 [mm9:5:122113385-122113406:+] 0.7012 146 7 -17.47 -0.2182 MIMAT0004642 mmu-miR-330 72399 Brap cgGAUUC-UGUGUCCGGGUCUCu ||: | |||||| ||||||| guCUGUGAACACAGCCCCAGAGu 2 21 1107 1129 [mm9:5:122113384-122113406:+] 0.7012 171 7 -29.93 -0.2142 MIMAT0000584 mmu-miR-339-5p 72399 Brap gcACUCGAGGACCUCCUGUCCCu ||:| |::|| ||||||| guUGGG-UUUUG--UGACAGGGu 2 22 805 824 [mm9:5:122113082-122113101:+] 0.4997 148 7 -20.36 -0.3062 MIMAT0000590 mmu-miR-342-3p 72399 Brap ugcccAC-GCUAAAGACACACUCu || :|| | : ||||||| ucauuUGUUGAGUGUAGUGUGAGg 2 19 121 144 [mm9:5:122135622-122135645:+] 0.6117 149 7 -14.67 -0.2408 MIMAT0000612 mmu-miR-135b 72399 Brap aguguauccuuacuuuUCGGUAu |||||| agagccucuuccaaacAGCCAUa 2 8 880 902 [mm9:5:122136381-122136403:+] 0.5682 120 6 -10.49 -0.1267 MIMAT0000616 mmu-miR-101b 72399 Brap aaGUCGAUAGUGUCAUGACAu | || |:| :||||||| uaCUGCCCUUA-GGUACUGUg 2 20 1329 1348 [mm9:5:122113606-122113625:+] 0.5516 149 7 -15.27 -0.1020 MIMAT0000648 mmu-miR-10a 72399 Brap guguuUAAGCCUAGA---UGUCCCAu :|| || |:| ||||||| gguuuGUUGGGUUUUGUGACAGGGUc 2 19 800 825 [mm9:5:122113077-122113102:+] 0.4997 149 7 -19.32 -0.1737 MIMAT0000648 mmu-miR-10a 72399 Brap gugUUUAAGCCUAGAUG-UCCCAu |:|||: |:||| ||||| aagAGAUUU--UUUUACAAGGGUa 2 21 704 725 [mm9:5:122112981-122113002:+] 0.4975 121 0 -15.87 -0.6709 MIMAT0000659 mmu-miR-212 72399 Brap accGGCACUGACCUCUGACAAu | |||: | ||||||| gguCAGUGGAUACUGACUGUUu 2 20 751 772 [mm9:5:122136252-122136273:+] 0.6064 151 7 -21.49 -0.1776 MIMAT0000662 mmu-miR-216a 72399 Brap agUGUCAACGGUCGAC-UCUAAu :|: ||| ||| || ||||| guGCGUUUGACAG-UGUAGAUUg 2 21 1370 1391 [mm9:5:122113647-122113668:+] 0.6004 126 0 -14.19 -0.1519 MIMAT0000663 mmu-miR-218 72399 Brap uguaccaAUC-U-AGUUCGUGUu ||| | | ||||||| cauuaacUAGCACUAAAGCACAg 2 15 338 360 [mm9:5:122135839-122135861:+] 0.5074 144 7 -10.98 -0.2173 MIMAT0000671 mmu-miR-224 72399 Brap uugccuugguGAUCACUGAAu :| ||||||| caugccuguuUUCGUGACUUc 2 12 1571 1591 [mm9:5:122113848-122113868:+] 0.5000 143 7 -10.55 -0.4669 MIMAT0000673 mmu-miR-181b 72399 Brap ugGGUGGC-UGUC--GUUA-CUUACAa :||||| ||| ||:| |||||| gaUCACCGUCCAGUUCAGUGGAAUGUg 2 22 1202 1228 [mm9:5:122136703-122136729:+] 0.5588 131 6 -23.63 -0.1359 MIMAT0000674 mmu-miR-181c 72399 Brap ugAGUGGCUGUCCA-ACU-UACAa | ||||: | || ||| |||| uuUGACCGGAAUGUCUGACAUGUc 2 21 1158 1181 [mm9:5:122136659-122136682:+] 0.5588 127 0 -14.31 -0.1212 MIMAT0000711 mmu-miR-365 72399 Brap uauuccuaaaaauccCCGUAAu |||||| guugaaauaguccacGGCAUUa 2 8 1183 1204 [mm9:5:122113460-122113481:+] 0.7986 120 6 -8.17 -0.1094 MIMAT0000748 mmu-miR-383 72399 Brap ucggUGUCAGUGGAAGAC-UAGa :::| ::|:||||| ||| ggaaGUGGAUGCUUUCUGCAUCu 2 19 456 478 [mm9:5:122112733-122112755:+] 0.5510 122 0 -16.81 -0.2042 MIMAT0000904 mmu-miR-215 72399 Brap cagACAGUUUAG-UAUCCAGUa |||:| |: | |||||| aaaUGUUAUUUUAAAAGGUCAa 2 19 1734 1755 [mm9:5:122137235-122137256:+] 0.5630 125 6 -12.57 -0.4009 MIMAT0004745 mmu-miR-384-5p 72399 Brap ugUAACGGAUCCUUAACAAAUGu | || || :| ||||||| ucAGUGGAUACUGACUGUUUACa 2 22 753 775 [mm9:5:122136254-122136276:+] 0.6064 153 7 -12.08 -0.2385 MIMAT0001092 mmu-miR-376b 72399 Brap uucaccuaCAAGGAGAUACUa || ||||||| guuccaggGUAAAUCUAUGAc 2 14 282 302 [mm9:5:122135783-122135803:+] 0.5556 141 7 -12.00 -0.4366 MIMAT0001095 mmu-miR-370 72399 Brap ugGUCCAAGGUGG----GGUCGUCCg |: | |||:| |||||||| ggCGUGAGCCAUCAUAACCAGCAGGg 2 21 875 900 [mm9:5:122113152-122113177:+] 0.5013 147 7 -25.22 -0.1392 MIMAT0001095 mmu-miR-370 72399 Brap uggUCCAAGGUGG--GGUCGUCCg || ||| || |||||||| gagAGUGUCCUCCAUCCAGCAGGa 2 20 662 685 [mm9:5:122136163-122136186:+] 0.6064 158 7 -25.29 -0.2678 MIMAT0003168 mmu-miR-543 72399 Brap uuCUUCACGUGGCGCUUACAAa || |||:| |||||| aaGAUGUGUAAAUAAAAUGUUa 2 21 1720 1741 [mm9:5:122137221-122137242:+] 0.5630 124 6 -11.96 -0.3573 MIMAT0003172 mmu-miR-542-3p 72399 Brap aaaGUCAAUAGUUAGACAGUGu :|||| || |||||||| uugUAGUU-UC--UCUGUCACa 2 20 921 939 [mm9:5:122113198-122113216:+] 0.5013 154 7 -18.51 -0.9075 MIMAT0003374 mmu-miR-302b 72399 Brap gaugauuuuguaccuUCGUGAAu ||||||| augcuuuuuccccccAGCACUUg 2 9 186 208 [mm9:5:122112463-122112485:+] 0.5115 140 7 -12.45 -0.1161 MIMAT0003377 mmu-miR-302d 72399 Brap ugugaguuuguaccuUCGUGAAu ||||||| augcuuuuuccccccAGCACUUg 2 9 186 208 [mm9:5:122112463-122112485:+] 0.5115 140 7 -11.34 -0.1161 MIMAT0004186 mmu-miR-301b 72399 Brap cgAAACUGUU-AUGGUAACGUGAc | | |||| | || ||||||| ucUGUCACAAUUUCCCUUGCACUu 2 22 931 954 [mm9:5:122113208-122113231:+] 0.5013 164 7 -17.39 -0.2352 MIMAT0003727 mmu-miR-374 72399 Brap gugAAUCGUCCAACAUAAUAua ||| :|| | |||||| gugUUA-AGGGAUUUAUUAUua 3 20 617 637 [mm9:5:122112894-122112914:+] 0.5068 133 0 -5.91 -0.1549 MIMAT0003729 mmu-miR-216b 72399 Brap aguGUAAACGGACGUCUCUAAa || ||| | ||||||| cccCA-UUG--UUAAGAGAUUu 2 20 694 712 [mm9:5:122112971-122112989:+] 0.4975 142 7 -11.96 -0.7096 MIMAT0003889 mmu-miR-758 72399 Brap aucACCUGGUCCAGUGUUu | |:: |||||||| gcaUAGGUGUGGUCACAAc 2 17 482 500 [mm9:5:122112759-122112777:+] 0.5510 148 7 -14.41 -0.1030 MIMAT0003889 mmu-miR-758 72399 Brap aucACCUGGUC--CAGUGUUu | ||:::| ||||||| aacUAGAUUGGUUGUCACAAa 2 17 324 344 [mm9:5:122112601-122112621:+] 0.4966 147 7 -13.32 -0.4873 MIMAT0003889 mmu-miR-758 72399 Brap aucaccuggucCAGUGUUu ||||||| guaguuucucuGUCACAAu 2 9 923 941 [mm9:5:122113200-122113218:+] 0.5013 140 7 -12.99 -0.5466 MIMAT0003456 mmu-miR-495 72399 Brap uuCU-UCACGUGGUACAAACAAa || :|| :::: |||||||| uuGAUGGUUUGUU-UGUUUGUUu 2 21 1612 1633 [mm9:5:122113889-122113910:+] 0.5000 149 7 -11.72 -0.7267 MIMAT0003475 mmu-miR-146b 72399 Brap ucGGAUAC--CUUAAGUCAA-GAGu |:|: | || ||||||| ||| agCUUGGGCAGAUUUCAGUUACUCu 2 21 810 834 [mm9:5:122136311-122136335:+] 0.5920 127 0 -18.32 -0.6627 MIMAT0003482 mmu-miR-499 72399 Brap uuUGUAGUGAC-GU-UCAGAAUu ||| ||||| :| ||||||| uuACA-CACUGUUACAGUCUUAc 2 20 1422 1443 [mm9:5:122136923-122136944:+] 0.6529 159 7 -17.57 -0.1438 MIMAT0003515 mmu-miR-721 72399 Brap aaGGGGGAAAAUUAACGUGAc | | ||| ||||||| guCACAAUUUCCCUUGCACUu 2 20 934 954 [mm9:5:122113211-122113231:+] 0.5013 147 7 -14.95 -0.2416 MIMAT0004324 mmu-miR-181d 72399 Brap ugGGUGGCUGUU---GUUA-CUUACAa :||||| | | ||:| |||||| gaUCACCGUCCAGUUCAGUGGAAUGUg 2 22 1202 1228 [mm9:5:122136703-122136729:+] 0.5588 128 6 -22.06 -0.1373 MIMAT0004847 mmu-miR-882 72399 Brap ugAUUACGCGAUUGAGA-GAGGa ||| : |||||||| |||| uaUAA-CUACUAACUCUGCUCCa 2 21 373 394 [mm9:5:122112650-122112671:+] 0.5011 130 0 -18.83 -0.3504 MIMAT0004858 mmu-miR-18b 72399 Brap gaUUGUCGUGAUCUACGUGGAAu || || | | | ||||||| acAAAAGGAGUCAAAGCACCUUg 2 22 1502 1524 [mm9:5:122113779-122113801:+] 0.4942 157 7 -14.69 -0.2122 MIMAT0004869 mmu-miR-421 72399 Brap cgcggguuaauuacAGACAACUa |||||||| ucaguggcaacccuUCUGUUGAa 2 10 1166 1188 [mm9:5:122113443-122113465:+] 0.7986 145 7 -13.60 -1.1324 MIMAT0004889 mmu-miR-504 72399 Brap cuAUCUCACGUCUGGUCCCAGa |:|: | :: : ||||||| guUGGGUUUUGUGACAGGGUCu 2 21 805 826 [mm9:5:122113082-122113103:+] 0.4997 148 7 -21.01 -0.4271 MIMAT0004896 mmu-miR-590-3p 72399 Brap ugaUCGA-AUAUGUAUUUUAau || | |:|| ||||||| ucaAGAUGUGUAAAUAAAAUgu 3 19 1718 1739 [mm9:5:122137219-122137240:+] 0.5630 141 0 -6.36 -0.1324 MIMAT0004936 mmu-miR-873 72399 Brap ucCUCUG-AGU-GUUCAA-GGACg || |: ||| || ||| |||| cuGACAUGUCACCACGUUGCCUGu 2 20 1172 1195 [mm9:5:122136673-122136696:+] 0.5588 121 0 -13.23 -0.1234 MIMAT0004937 mmu-miR-875-5p 72399 Brap guggacuauuUUGACUCCAUAu ||||||||||| gcgcucucccAACUGAGGUAUa 2 13 156 177 [mm9:5:122112433-122112454:+] 0.5056 160 7 -22.18 -0.3828 MIMAT0004943 mmu-miR-653 72399 Brap gucaucucuaacaAAGUUGUg ||||||| ccaaaccgaacagUUCAACAg 2 9 776 796 [mm9:5:122113053-122113073:+] 0.4989 140 7 -8.40 -0.1187 MIMAT0005850 mmu-miR-1192 72399 Brap uuaaACCAGACAAACAAACAAa ||||:|||||||||||| uugaUGGUUUGUUUGUUUGUUu 2 19 1612 1633 [mm9:5:122113889-122113910:+] 0.5000 186 7 -25.77 -0.7119

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G067926 Brap Mus musculus 72399

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Brap mghv-miR-M1-9 beg:596 end:614 pic:3' TTTTTCCAGGTCCG-TTTACACT 5'& |||| | ||||||| &5' -------TCCATCCGAAATGTG- 3' Brap mmu-miR-218 beg:342 end:360 pic:3' TGTACCAATCTAG--TTCGTGTT 5'& ||| |||||||. &5' -------TAGCACTAAAGCACAG 3' Brap mmu-miR-129-3p beg:484 end:494 pic:3' TACGAAAAACCCCATTCCCGAA 5'& ||||||| &5' --------------AAGGGCT- 3' Brap mmu-miR-136 beg:532 end:551 pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& | ...|||||||||| &5' ------TTGGGGCAAATGGAGT 3' Brap mmu-miR-10b beg:26 end:44 pic:3' GTGTTTAAGCCAA-GATGTCCCAT 5'& .|| | ||||||| &5' --------TGGGCACCACAGGGT- 3' Brap mmu-miR-1942 beg:1464 end:1475 pic:3' GTTGGTCTACTTCTGTAGACT 5'& |||||||| &5' -------------ACATCTGA 3' Brap mmu-miR-20bstar beg:399 end:414 pic:3' GATCTTCACGAGTGTGACGTCA 5'& ||| | |||||||| &5' -------TGC-C-CACTGCAG- 3' Brap mmu-miR-1960 beg:1308 end:1326 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& .|| | |||||||| &5' GGCAGGC------CAGCACTG- 3' Brap mmu-miR-291a-3p beg:159 end:178 pic:3' CGTGTGTTTC-ACCTTCGTGAAA 5'& |..| ||| ||||||| &5' ------AGGGTTGGCAGCACTT- 3' Brap mmu-miR-302d beg:164 end:178 pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& ||| ||||||| &5' -----------TGGCAGCACTT- 3' Brap mmu-miR-499 beg:1424 end:1443 pic:3' TTTGTAGTGACGT--TCAGAATT 5'& |||||. ||||||| &5' ------CACTGTTACAGTCTTA- 3' Brap mmu-miR-598 beg:295 end:311 pic:3' ATTGCTACTGCTGCTACTGCAT 5'& |.||| |||||||| &5' --------ATGAC-ATGACGTA 3' Brap mmu-miR-880 beg:532 end:552 pic:3' AGATGAGTCTCTCCTACCTCAT 5'& .|| |.| |||||||| &5' ---GCTTGGGGCAAATGGAGTA 3' Brap mmu-miR-449c beg:387 end:406 pic:3' GGTCGATCGTTACGTGACGGA 5'& .| || |. ||||||| &5' --GGAGAGGAGCCCACTGCC- 3' Brap mmu-miR-1186 beg:1309 end:1325 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& || |||||||| &5' ---GCAGG-----CCAGCACT- 3' Brap mmu-miR-1186 beg:167 end:178 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||||. &5' --------------CAGCACTT 3' Brap mmu-miR-370 beg:669 end:685 pic:3' TGGTCCAAGGTGGGGTCGTCCG 5'& |||| .|||||||| &5' -------TCCA-TCCAGCAGG- 3' Brap mmu-miR-504 beg:29 end:46 pic:3' CTATCTCACGTCTGGTCCCAGA 5'& ||| |||||||| &5' --------GCACCACAGGGTCT 3' Brap mmu-miR-763 beg:364 end:382 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& ||| || |||||||| &5' -CCAGAGG-----CCCAGCTG- 3' Brap mmu-miR-145star beg:1698 end:1710 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||||||| &5' ------------TTCCAGGAA- 3' Brap mmu-miR-326 beg:1576 end:1588 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& ||||||||| &5' ------------GCCCAGAGG 3' Brap mmu-miR-92astar beg:1237 end:1255 pic:3' CATTACGGTGGTTAGGGGTGGA 5'& || || |||||||| &5' ------CCTA-AAACCCCACCT 3' Brap mmu-miR-714 beg:1138 end:1157 pic:3' CGCTGGCTGGCCGGGAGCAGC 5'& |||.|||.|| ||||||| &5' --GACTGACTGGACCTCGTC- 3' Brap mmu-miR-761 beg:1563 end:1581 pic:3' ACACAGTCAAAGTGGGACGACG 5'& ||| .||||||||| &5' -----CAGCA--GCCCTGCTGC 3' Brap mmu-miR-351 beg:1295 end:1312 pic:3' GTCCGAGTTTCCCGAGGAGTCCCT 5'& ||||| .||||||||| &5' --GGCTC------TTCCTCAGGG- 3' Brap mmu-miR-125a-5p beg:1303 end:1312 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& ||||||| &5' ----------------CTCAGGG- 3' Brap mmu-miR-125b-5p beg:1303 end:1312 pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& ||||||| &5' --------------CTCAGGG- 3' Brap mmu-miR-1947 beg:1142 end:1159 pic:3' GTCGTGAGTCGATC--GAGCAGGA 5'& ||.| |||||||| &5' ----------CTGGACCTCGTCCT 3' Brap mmu-miR-1955 beg:35 end:54 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& ||| |. | ||||||| &5' --------CAGGGTCTGCTGGGAC- 3' Brap mmu-miR-682 beg:1247 end:1265 pic:3' GTCTGAAGT-GACACTGACGTC 5'& || |||||||||||| &5' -------CACCTGTGACTGCAG 3' Brap mmu-miR-484 beg:1025 end:1036 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& |||||||. &5' --------------GAGCCTGG 3' Brap mcmv-miR-M55-1 beg:1191 end:1209 pic:3' TGCCGAT-CGTGCGGCTAGTGGT 5'& ||. |. .||.||||||| &5' ----CTGTGT-TGCTGATCACC- 3' Brap mmu-miR-1967 beg:1320 end:1335 pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& |. || ||||||| &5' ---------CTGCA-GATCCTC- 3' Brap mcmv-miR-M23-2 beg:213 end:231 pic:3' GGCGAACTGGCTC--CGGGGGTA 5'& .|.|.| ||||||| &5' -------GCTGGGTAGCCCCCA- 3' Brap mmu-miR-345-5p beg:738 end:758 pic:3' TTCGTGACCTGATCCCCAGTCG 5'& | .|| || ||||||||. &5' --GTGTTG--CT-GGGGTCAGT 3' Brap mmu-miR-1982.1 beg:179 end:190 pic:3' GACACCCTCTTGTATCCCACTCT 5'& |||||||| &5' --------------AGGGTGAG- 3' Brap mmu-miR-299star beg:492 end:506 pic:3' TACATACACCCTGCCATTTGGT 5'& || |||||||| &5' ---------GGTT-GTAAACCA 3' Brap mmu-miR-872 beg:296 end:315 pic:3' GGACTTGATTGTTCATTGGAA 5'& ||| |.|| |||||||| &5' --TGACATGAC--GTAACCTT 3' Brap mmu-miR-1197 beg:663 end:673 pic:3' TCTTCATCTGGTACACAGGAT 5'& ||||||| &5' -------------GTGTCCT- 3' Brap mmu-miR-466i beg:1043 end:1056 pic:3' ATCACACATACAC-ACACACATA 5'& | |||||||| &5' ------------GCTGTGTGTA- 3' Brap mcmv-miR-m01-3 beg:1584 end:1607 pic:3' AGCTC-CGTTGTCAGCGAAGTGGC 5'& ||| |.|.|||| |||||||| &5' --GAGAGTAGCAGT-GCTTCACC- 3' Brap mcmv-miR-m108-2-5p.2 beg:1253 end:1275 pic:3' CACTGGCGAG-CGCTGCTCACT 5'& |||||.|| |.|| ||||| &5' GTGACTGCAGAGTGA-GAGTG- 3' Brap mcmv-miR-m22-1 beg:1609 end:1622 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& || .||||.| &5' ------------GGTTGGGGGA 3' Brap mcmv-miR-m59-1 beg:1412 end:1435 pic:3' GAC-TGC-CAGCTCCGTGACGATT 5'& | ||| ||. |||||.|| &5' --GAACGCGTTACA-CACTGTTA- 3' Brap mghv-miR-M1-5 beg:635 end:654 pic:3' CTCTGCTGGGCTAGAGTTGAGA 5'& |.|.| |||||.||| &5' -----GGCTCCTTCTCAGCTC- 3' Brap mghv-miR-M1-6 beg:1378 end:1404 pic:3' TTTTGGTGGAGT--GTGTCAAAGT 5'& |.|.||.|||| || || ||| &5' AGAGCCGCCTCTTCCAGAGCTTC- 3' Brap mghv-miR-M1-9 beg:62 end:75 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& || ||.||||. &5' -----------GG-AAGTGTGG 3' Brap mmu-let-7a beg:1425 end:1451 pic:3' TTGAT-ATGTT-GGATGATGGAGT 5'& |||. ||||. |.||| . |||| &5' -ACTGTTACAGTCTTACCGGCTCA 3' Brap mmu-let-7gstar beg:1027 end:1058 pic:3' CGT-TCCGTCAC----CGG-ACATGTCA 5'& || .|||||| ||. |||..||| &5' GCCTGGGCAGTTGACAGCTGTGTGTAGT 3' Brap mmu-miR-101a beg:1213 end:1234 pic:3' AAGTCAATAGTGTCATGACAT 5'& |||||| ||.||||| &5' TTCAGTGGAAT--GTGCTGTA 3' Brap mmu-miR-101astar beg:644 end:664 pic:3' CGTAGTCGTGACACTATTGACT 5'& ||||| | |.||||||| &5' ---TCAGCTCA--GGTAACTGA 3' Brap mmu-miR-101b beg:1213 end:1234 pic:3' AAGTCGATAGTGTCATGACAT 5'& |||||. ||.||||| &5' TTCAGTGGAAT--GTGCTGTA 3' Brap mmu-miR-105 beg:1344 end:1366 pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& ||||.||. |||.| .|| || &5' --CACAGGCGGCTGGG-GCTGGG 3' Brap mmu-miR-106b beg:1101 end:1116 pic:3' TAGACGTGACAGTCGTGAAAT 5'& ||||| ||||||| &5' --------TGTCA-CACTTTA 3' Brap mmu-miR-10a beg:271 end:293 pic:3' GTGTTTAAGCCTAGATGTCCCAT 5'& .|| |.||.|. ||||||| &5' -GCAG--TTGGGTTC-CAGGGTA 3' Brap mmu-miR-10b beg:271 end:293 pic:3' GTGTTTAAGCCAAGATGTCCCAT 5'& .| |.|| ||||| ||||||| &5' -GC-AGTTGGGTTC--CAGGGTA 3' Brap mmu-miR-1186 beg:327 end:342 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& ||||||||||.| &5' ---------AATTCCAGCATT- 3' Brap mmu-miR-1186b beg:317 end:337 pic:3' CACCACGTACGGAAATTAGGGT 5'& ||| |||.||| &5' -----GCACTAAAGGAATTCCA 3' Brap mmu-miR-1188 beg:631 end:655 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||||||.| .|||| .|| &5' TCCTGGCTCCTTCTCAGCTCA 3' Brap mmu-miR-1188 beg:1330 end:1350 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& ||| |||||.| | ||||| &5' TCC-GGCCCGAGC-CACAC-- 3' Brap mmu-miR-1195 beg:521 end:542 pic:3' ACTCGTCCGACCGGAGCTTGAGT 5'& ||||| |||||.| |..| &5' --AGCAGCCTGGCTTGGGGC--- 3' Brap mmu-miR-122 beg:1101 end:1116 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& |||||||||..| &5' ----------TGTCACACTTTA 3' Brap mmu-miR-125a-3p beg:111 end:129 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& ||||||. |||..||| &5' GGCTCCT-------TCATTTGT 3' Brap mmu-miR-125b-3p beg:1014 end:1036 pic:3' TCGAGGGT--TCTCGGATTGGGCA 5'& ||||.|.| |||||||.. | &5' AGCTTCTAAAAGAGCCTGGGC--- 3' Brap mmu-miR-125b-3p beg:868 end:892 pic:3' TCGAGGGT-TCTCGGATTGGGCA 5'& .|||.| ||||||| .|| &5' GGCTTCAGCAGAGCCTCTTCC-- 3' Brap mmu-miR-125bstar beg:723 end:743 pic:3' TCCAGGGTTCTTG-GACTGAACA 5'& |||| ||||||||| &5' ------CAAGCTGACTGACTTGT 3' Brap mmu-miR-1274a beg:979 end:996 pic:3' ACCGCGGACTTGTCCCTGGACT 5'& .|||||| |||.||| &5' ------TTGAACA--GACTTGA 3' Brap mmu-miR-127star beg:1586 end:1605 pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& ||||. | | |||||| &5' ---AGAGTAG-CAGTGCTTCA- 3' Brap mmu-miR-129-5p beg:691 end:719 pic:3' CGTTCGGGTC---TGGC-GTTTTTC 5'& |||||||.|| .|| |.|.|.| &5' GCAAGCCTAGCTAGCCATCGAGAGG 3' Brap mmu-miR-129-5p beg:1699 end:1718 pic:3' CGTTCGGGTCTGGC-GTTTTTC 5'& .||||. |||||| &5' -----TCCAGGAAAACAAAAA- 3' Brap mmu-miR-1306 beg:1200 end:1222 pic:3' GTAGTGGT-GGTCTCGGTTGCA 5'& ||||||. |||| .||..| &5' -ATCACCGTCCAGT-TCAGTG- 3' Brap mmu-miR-132 beg:749 end:772 pic:3' GCTGGT-ACCGACATCTGACAAT 5'& | || ||| ||||||| &5' -GGTCAGTGGATACTGACTGTT- 3' Brap mmu-miR-138star beg:125 end:150 pic:3' GGGAC-CACA--ACACTTCATC-GGC 5'& .|| |||| |||||.| || |. &5' --TTGAGTGTAGTGTGAGG-AGACT- 3' Brap mmu-miR-139-5p beg:88 end:108 pic:3' GACCTCTGTGCACGTGACATCT 5'& ||| |||. |||||.| &5' CTGAGGACGA----ACTGTGG- 3' Brap mmu-miR-142-3p beg:1306 end:1328 pic:3' AGGTATTTCATCCT-TTGTGATGT 5'& |..| ||| |.||||.|| &5' -----AGGGCAGGCCAGCACTGCA 3' Brap mmu-miR-143 beg:560 end:592 pic:3' CTCGA-TGTCAC--------GAAGTAGAGT 5'& |.| |||||| |||.||.|| &5' GGGAAGACAGTGACAGCTCTCTTTATTTC- 3' Brap mmu-miR-145 beg:1132 end:1151 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& |||| .||||||| &5' -----TTCCGACT--GACTGGAC 3' Brap mmu-miR-145star beg:370 end:392 pic:3' GTTCTTGTC-ATAAAGGTCCTTA 5'& |.| ||| |. |.|||||. &5' -AGGCCCAGCTGCCTTCAGGAG- 3' Brap mmu-miR-150 beg:1604 end:1622 pic:3' GTGACCATGTTCCCAACCCTCT 5'& ||| |||||||.|| &5' -------ACACAGGTTGGGGGA 3' Brap mmu-miR-154 beg:950 end:971 pic:3' GCTTCCGTTGTGC-CTATTGGAT 5'& ||| ||||. |.||||.|. &5' ---AGG-AACATCAGGTAACTTG 3' Brap mmu-miR-154 beg:297 end:314 pic:3' GCTTCCGTTGTGCC-TATTGGAT 5'& .|||.| .|||||| &5' -------GACATGACGTAACCT- 3' Brap mmu-miR-15a beg:730 end:750 pic:3' GTGTTTGGTAATACACGACGAT 5'& || .||. ||||.||||. &5' -ACTGACT----TGTGTTGCTG 3' Brap mmu-miR-17star beg:1309 end:1329 pic:3' GATGTTCACGGGAGTGACGTCA 5'& .| || ||| |||||||| &5' --GC-AG-GCCAGCACTGCAG- 3' Brap mmu-miR-17star beg:393 end:414 pic:3' GATGTTCACGGGA-----GTGACGTCA 5'& |||| |||||||| &5' --------GCCCACTGCCCACTGCAG- 3' Brap mmu-miR-186star beg:526 end:542 pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& || . |||.|||| &5' CCTGG---------CTTGGGGC 3' Brap mmu-miR-186star beg:551 end:566 pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& ||||. .|||||| &5' CCCAG---------TTTAGGG- 3' Brap mmu-miR-1894-3p beg:430 end:451 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& ||||| || ||.||||| ||| &5' CTCCC-TC-CCTTCTCC--TGC 3' Brap mmu-miR-1896 beg:0 end:11 pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& |||||||||| &5' -----------CCATCAGAGA- 3' Brap mmu-miR-1897-5p beg:430 end:455 pic:3' GGGGGAGA-AAGAGGTAGGTTTC 5'& |.||||| |||||| | ||.|| &5' CTCCCTCCCTTCTCC-TGCAGAG 3' Brap mmu-miR-18astar beg:1363 end:1383 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& .| ||.|| |.|||||| &5' -GGCTGGGGC---TGGGGCAG- 3' Brap mmu-miR-1900 beg:138 end:159 pic:3' ACTTC-CTGGTC-TCTCCCGCCGG 5'& |||.| |||.| |||||| || &5' TGAGGAGACTAAAAGAGGG-GG-- 3' Brap mmu-miR-1903 beg:145 end:165 pic:3' ACAGAGTCCTTCTTCTTCTTCC 5'& || ||||.|..||||| &5' ---CTAA--AAGAGGGGGAAGG 3' Brap mmu-miR-1904 beg:1649 end:1668 pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& | || || |.|||||. &5' ----CAGCC-GACGGGCAGAG- 3' Brap mmu-miR-1904 beg:1570 end:1596 pic:3' GGAGGGA-GGTCTCCTCGTC-TTG 5'& ||| |. ||||||||| || |.| &5' CCTGCTGCCCAGAGGAG-AGTAGC 3' Brap mmu-miR-1927 beg:1649 end:1671 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& ||| || .||. |||||||. &5' -CAG-CC--GACGGGCAGAGGTT 3' Brap mmu-miR-1928 beg:102 end:118 pic:3' CTCGACCGTTACATCGA 5'& |||. ||||.||| &5' ----TGGTCATGTGGCT 3' Brap mmu-miR-1928 beg:1358 end:1376 pic:3' CTCGACCGTTACATCGA 5'& |.||||| . || ||| &5' GGGCTGGGGCTGGGGCT 3' Brap mmu-miR-1929 beg:1399 end:1418 pic:3' GAGACGAGATATTTCAGGATCTT 5'& .||||| .|||||| &5' -----TTCTATTTTA-TCTAGAA 3' Brap mmu-miR-193 beg:1624 end:1647 pic:3' TGACCCTGAA-ACATCCGGTCAA 5'& |||||| ||| ||||||| &5' -CTGGGAAGGCTGT-GGCCAGT- 3' Brap mmu-miR-1931 beg:1457 end:1482 pic:3' CGGTAGCGTGGTCG--GGAACGTA 5'& |.| |.|||| ||||||| &5' GTC-TTGCACATCTGACCTTGCA- 3' Brap mmu-miR-1933-5p beg:282 end:303 pic:3' TTTGATTCTGG-CTTGT---GGTACTGA 5'& || | .| |.||||| &5' ---------CCAGGGTAAATCTATGAC- 3' Brap mmu-miR-1935 beg:197 end:212 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& |||| .||||||| &5' --------GCCA--TTCTGCCT 3' Brap mmu-miR-1936 beg:813 end:831 pic:3' CGGTCAAGTGTCGTCC--AGTCAAT 5'& .|||| ||||||| &5' ----------GGCAGATTTCAGTTA 3' Brap mmu-miR-1937a beg:994 end:1016 pic:3' ACCCCCGAGCA--GGCCCTAA 5'& |||| | | ..|||||| &5' -GGGGACACCATGTTGGGATT 3' Brap mmu-miR-1937c beg:1613 end:1633 pic:3' ACCCCCGAGAA-GGCCCTA 5'& |||||| | |.|||| &5' TGGGGGAAATGCCTGGGA- 3' Brap mmu-miR-193b beg:738 end:758 pic:3' TCGCCCTGAAACACCCGGTCAA 5'& |.| .|| |||.|||| &5' -GTGTTGCTG---GGGTCAGT- 3' Brap mmu-miR-1940 beg:1318 end:1336 pic:3' TTGACGAGGTGGAAGAGTC-AGGAGGTA 5'& |||. ||| ||||||. &5' --------CACTG---CAGATCCTCCG- 3' Brap mmu-miR-1940 beg:656 end:676 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& ||. ||||||||| &5' ---------ACTGAGAGTGTCCTCCAT 3' Brap mmu-miR-1940 beg:370 end:388 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& || ||| || |||.|| &5' ----GC-CCAGCTG------CCTTCA- 3' Brap mmu-miR-194 beg:1415 end:1437 pic:3' AGGTGTACCTCAACGACAATGT 5'& |.|.| |||||||| &5' --CGCGTTACACA-CTGTTACA 3' Brap mmu-miR-1943 beg:419 end:439 pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& ||| |||| ||||||| &5' TCC---TGCCATC--CCTCCCT- 3' Brap mmu-miR-1946a beg:514 end:536 pic:3' TTTTCACACACGGTGG-TGACGGGCCGA 5'& ||.| .| |||.|||| &5' ---------TGTCTTCAGCAGCCTGGCT 3' Brap mmu-miR-195 beg:1180 end:1203 pic:3' CGGTTATAAA-GACACGACGAT 5'& ||| .|| |||||.||||. &5' -CCAC-GTTGCCTGTGTTGCTG 3' Brap mmu-miR-1954 beg:1278 end:1296 pic:3' TTGTCCCAGAGT---GAGACGTCA 5'& |||. |||||.|| &5' --------CTCGGACCTCTGTAG- 3' Brap mmu-miR-1955 beg:1351 end:1376 pic:3' TTTTCGACGTC-ACGTAGGACCCTGA 5'& .|||| .| || . |||||.|| &5' ---GGCTGGGGCTGGGG-CTGGGGCT 3' Brap mmu-miR-1955 beg:522 end:542 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& |||| |.||||.| &5' -------GCAGCCTGGCTTGGGGC- 3' Brap mmu-miR-1956 beg:12 end:34 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& ||| |||| | .|||||.| &5' TCC-CTGAGACT-TCCTGGGC- 3' Brap mmu-miR-1956 beg:1015 end:1036 pic:3' AGGCGACTGAG--TCG-GGACCTGA 5'& ||| || || |||||.| &5' ---GCTT-CTAAAAGAGCCTGGGC- 3' Brap mmu-miR-1968 beg:362 end:383 pic:3' TCAGGTGGTA---GGAATTGTCGACGT 5'& | ||| || ||||||| &5' ---CTCCCAGAGGCC----CAGCTGC- 3' Brap mmu-miR-1968 beg:1030 end:1051 pic:3' TCAGGTGGTAGG-AATTGTCGACGT 5'& || | ||.|||||||. &5' ---CCTGGG-CAGTTGACAGCTGT- 3' Brap mmu-miR-196b beg:1663 end:1684 pic:3' GGGTTGTTGTCC-----TTTGATGGAT 5'& ||| |||||||.|. &5' ---------AGGTTTCCAAACTACTTG 3' Brap mmu-miR-1982.1 beg:1478 end:1496 pic:3' GACACCCTCTTGTATCCCACTCT 5'& |||| |.|||||.| &5' -------AGAAGCTGGGGTGGG- 3' Brap mmu-miR-1982.2 beg:179 end:189 pic:3' GACACCCTCTTGTATCCCACT 5'& ||||||| &5' --------------AGGGTGA 3' Brap mmu-miR-19a beg:1452 end:1470 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& ||| | ||||||| &5' -------TGCTT-GTCTTGCACA 3' Brap mmu-miR-19b beg:1452 end:1470 pic:3' AGTCAAAACGTACCTAAACGTGT 5'& ||| || ||||||| &5' -------TGCTTGTC-TTGCACA 3' Brap mmu-miR-207 beg:151 end:174 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& |||||.| ||.|. | ||| &5' GAGGGGGAAGGGTTGGC---AGC 3' Brap mmu-miR-208a beg:1447 end:1466 pic:3' TGTTCGAAAAACGAGCAGAATA 5'& ||| ||||.|||||. &5' ---AGCCC--TGCTTGTCTTG- 3' Brap mmu-miR-20bstar beg:1307 end:1329 pic:3' GATCT-TCACGAGTGTGACGTCA 5'& .|. || || .|||||||| &5' --GGGCAG-GCCAGCACTGCAG- 3' Brap mmu-miR-2134 beg:169 end:185 pic:3' CGTGGGGCAAAGGGTTCTG 5'& ||||. |||||||. &5' GCACT-----TCCCAAGG- 3' Brap mmu-miR-2135 beg:704 end:724 pic:3' CAAAGCCGGGG---TTCTGGAGA 5'& ||| .||.||||| &5' ------GCCATCGAGAGGCCTCT 3' Brap mmu-miR-2135 beg:9 end:28 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& |.| ||| ||||.|| &5' ---TTGTCCCTGAGACTTC- 3' Brap mmu-miR-2135 beg:38 end:58 pic:3' CAAAGCCGG--GGTTCTGGAGA 5'& ||.| | .|||||.| &5' -----GGTCTGCTGGGACCTTT 3' Brap mmu-miR-2135 beg:1135 end:1154 pic:3' CAAAGCCGGG-GTTCTGGAGA 5'& || |. | .|||||| &5' ----CGACTGACTGGACCTC- 3' Brap mmu-miR-2146 beg:849 end:865 pic:3' GTGTACCTTGGGAAGAGGTG 5'& || . |||||||| &5' -----GGC-TGCTTCTCCA- 3' Brap mmu-miR-214star beg:1648 end:1665 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& .|||| |||.|||| &5' --GCAGCC------GACGGGCA 3' Brap mmu-miR-214star beg:758 end:780 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& |.| .| ||| ||||||| &5' --ATACTGACTGTTTACAGGCA 3' Brap mmu-miR-215 beg:1734 end:1754 pic:3' CAGACAGTTTAGTA-TCCAGTA 5'& |||.| |.| |||||| &5' ---TGTTATTTTAAAAGGTCA- 3' Brap mmu-miR-216a beg:1000 end:1016 pic:3' AGTGTCAACGGT-CGACTCTAAT 5'& ||| |.||.|||| &5' ---------CCATGTTGGGATT- 3' Brap mmu-miR-218 beg:492 end:513 pic:3' TGTACCAATCTA--GTTCGTGTT 5'& ||||. ||||||||. &5' ----GGTTGTAAACCAAGCACAG 3' Brap mmu-miR-218-1star beg:989 end:1010 pic:3' CCACGAACTGCCT--TGGTACAAA 5'& ||||| ||. |||||||| &5' ----CTTGAGGGGACACCATGTT- 3' Brap mmu-miR-219 beg:1047 end:1068 pic:3' TCTTAACGCAAA---CCTGTTAGT 5'& ||.|| |||||.|. &5' -----TGTGTAGTAAGGACAGTT- 3' Brap mmu-miR-223 beg:720 end:735 pic:3' ACCCCATAAACTGTTTGACTGT 5'& ||||||.||||| &5' ---------TGACAAGCTGAC- 3' Brap mmu-miR-26a beg:1664 end:1686 pic:3' TCGGATAGGACCTAATGAACTT 5'& .|.. ||| |||||||| &5' GGTT--TCCAAAC-TACTTGAA 3' Brap mmu-miR-26b beg:1668 end:1686 pic:3' TGGATAGGACTTAATGAACTT 5'& ||| |||||||| &5' -----TCCAAAC-TACTTGAA 3' Brap mmu-miR-27a beg:1246 end:1259 pic:3' CGCCTTGAATCGGT-GACACTT 5'& ||| |||||| &5' -----------CCACCTGTGA- 3' Brap mmu-miR-27b beg:1246 end:1259 pic:3' CGTCTTGAATCGGT-GACACTT 5'& ||| |||||| &5' -----------CCACCTGTGA- 3' Brap mmu-miR-27bstar beg:1437 end:1460 pic:3' CAAGTGGTT-AGTCGATTCGAGA 5'& |.|||.. ||||| |||. &5' --TTACCGGCTCAGCCCTGCTT- 3' Brap mmu-miR-28 beg:626 end:646 pic:3' GAGTTATCTGACAC-TCGAGGAA 5'& || || .||||||| &5' ------AGCCTTCCTGGCTCCTT 3' Brap mmu-miR-2861 beg:213 end:236 pic:3' GGCGGG----CGGCGGTCCGGGG 5'& ||. ||| ||||||.. &5' --GCTGGGTAGCCCCCAGGCTT- 3' Brap mmu-miR-294 beg:156 end:178 pic:3' TGTGTGTTTTCCCT----TCGTGAAA 5'& ..||||| ||||||| &5' ------GGAAGGGTTGGCAGCACTT- 3' Brap mmu-miR-295 beg:1219 end:1240 pic:3' TCTGAGTTTTCAT--CATCGTGAAA 5'& | .|| ||. ||||||.|| &5' ----TGGAATGTGCTGTAGCATTT- 3' Brap mmu-miR-295 beg:158 end:178 pic:3' TCTGAGTTTTC-ATCATCGTGAAA 5'& ||..| |.| ||||||| &5' ------AAGGGTTGGCAGCACTT- 3' Brap mmu-miR-29astar beg:314 end:338 pic:3' GACTTGTGGTTTTCTTTA-GTCA 5'& || |.|||.|||.||| ||| &5' CT-AGCACTAAAGGAATTCCAG- 3' Brap mmu-miR-29astar beg:341 end:362 pic:3' GACTTGTGGTTTTCTTTAGTCA 5'& || |.|||.|||. |||| &5' CT-AGCACTAAAGCA---CAGT 3' Brap mmu-miR-300 beg:454 end:478 pic:3' CTTCTCTCGAACGG-GAACGTAT 5'& |||||||| ||. |||||||. &5' GAAGAGAGA--GCTGCTTGCATG 3' Brap mmu-miR-302a beg:157 end:178 pic:3' AGTGGTTTTGT-ACCTTCGTGAAT 5'& .||. . ||| ||||||| &5' -----GAAGGGTTGGCAGCACTT- 3' Brap mmu-miR-302b beg:157 end:178 pic:3' GATGATTTTGT-ACCTTCGTGAAT 5'& .||. . ||| ||||||| &5' -----GAAGGGTTGGCAGCACTT- 3' Brap mmu-miR-3072star beg:420 end:442 pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& |||||| |||||| ||||| &5' CCTGCCATCCCTCCC--TCCCT 3' Brap mmu-miR-3099star beg:1346 end:1372 pic:3' GTTC-CCGACCTTC-CTTCGACC 5'& ||.| ||||||.. |..||||| &5' CAGGCGGCTGGGGCTGGGGCTGG 3' Brap mmu-miR-30c beg:755 end:776 pic:3' CGACTCTCACATC-----CT-ACAAATGT 5'& ||.| || |||||||| &5' ---------GTGGATACTGACTGTTTACA 3' Brap mmu-miR-30c-1star beg:874 end:893 pic:3' CCTCATTTGTTG-GGAGAGGGTC 5'& |.||. |||||.||| &5' ------AGCAGAGCCTCTTCCA- 3' Brap mmu-miR-30c-2star beg:165 end:182 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& ..|||| .||||| &5' ------GGCAGCAC-TTCCCA- 3' Brap mmu-miR-30c-2star beg:879 end:893 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |||| |||.||| &5' ---------AGCC-TCTTCCA- 3' Brap mmu-miR-32 beg:1039 end:1059 pic:3' AC-GTTGAATCATTACACGTTAT 5'& || ||.|| .||||.|.|| &5' TGACAGCT-----GTGTGTAGTA 3' Brap mmu-miR-32 beg:227 end:243 pic:3' ACGTTGAATCATTACACGTTAT 5'& || |||||..| &5' --------AGGCTTGTGCGGT- 3' Brap mmu-miR-322 beg:1183 end:1203 pic:3' AGGTTTTGTACTTAACGACGAC 5'& |. .| || ||.||||| &5' --CGTTGCCTG---TGTTGCTG 3' Brap mmu-miR-322 beg:729 end:750 pic:3' AGGTTTTGTACTTA--ACGACGAC 5'& .|| ||| ||.||||| &5' -----GAC-TGACTTGTGTTGCTG 3' Brap mmu-miR-323-3p beg:124 end:142 pic:3' TCTCCAGCTGGCACATTACAC 5'& ||.|| |||||.|||| &5' ----GTTGA--GTGTAGTGTG 3' Brap mmu-miR-324-3p beg:521 end:548 pic:3' TCGTCG---TGGACCCCGTC-ACC 5'& |||||| .|.||||||| ||| &5' AGCAGCCTGGCTTGGGGCAAATGG 3' Brap mmu-miR-326 beg:1390 end:1399 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& .|||||| &5' -------------TCCAGAG- 3' Brap mmu-miR-326 beg:1519 end:1538 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& || | || .|||||| &5' ----GAAGTAGTTTCCAGAG- 3' Brap mmu-miR-327 beg:1293 end:1312 pic:3' TAGGAGTACGG---GGAGTTCA 5'& || ||. |||||.| &5' --CCG---GCTCTTCCTCAGG- 3' Brap mmu-miR-328 beg:1651 end:1675 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& .| || ||||||||. ||| &5' GCCGACGGGCAGAGGTTTCCA- 3' Brap mmu-miR-331-5p beg:1614 end:1631 pic:3' CCTAGGGACCCTGGTATGGATC 5'& |||. ||.|||.| &5' --------GGGGAAATGCCTGG 3' Brap mmu-miR-331-5p beg:37 end:61 pic:3' CCTAGG-GACCCTGGT-ATGGATC 5'& ||.||. |||||||| |.|. &5' GGGTCTGCTGGGACCTTTGCT--- 3' Brap mmu-miR-337-3p beg:1522 end:1542 pic:3' TCCGTAGTATATCCTCGACTT 5'& |.| ||||||. &5' --GTAGTTTCCA-GAGCTGG- 3' Brap mmu-miR-338-3p beg:998 end:1013 pic:3' GTTGTTTTAGTGACTACGACCT 5'& ||| |||.|||. &5' ---------CACC-ATGTTGGG 3' Brap mmu-miR-343 beg:151 end:162 pic:3' AGACCCGTGTACTTCCCTCT 5'& .||||.|| &5' ------------GAGGGGGA 3' Brap mmu-miR-343 beg:791 end:812 pic:3' AGACCCGTGTAC--TTCCCTCT 5'& || |.|| .|||||| &5' ---GGTCGCAGCTAGAGGGAG- 3' Brap mmu-miR-345-3p beg:1199 end:1220 pic:3' CAGAGGTCTGG-GGA---TCAAGTCC 5'& ||.| || ||||||| &5' -------GATCACCGTCCAGTTCAG- 3' Brap mmu-miR-3470b beg:1246 end:1270 pic:3' GGTCGGAC-CAGATGTCTCACT 5'& ||| |||| | ||.|||||||| &5' CCA-CCTGTGACTGCAGAGTGA 3' Brap mmu-miR-3471 beg:808 end:827 pic:3' TTACGGAA-TGTCAACCTAGAGT 5'& ||.| .|| |||.||| &5' ---GCTTGGGCA----GATTTCA 3' Brap mmu-miR-3473 beg:925 end:947 pic:3' CCGACT--CGGTAGAGAGGT 5'& ||||| ||| |||||..| &5' GGCTGTGTGCC-TCTCTTTA 3' Brap mmu-miR-3473 beg:569 end:588 pic:3' CCGAC-TCGGTAGAGAGGT 5'& |. ||| |||||..| &5' -GTGACAGC--TCTCTTTA 3' Brap mmu-miR-3474 beg:274 end:291 pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& ||. |.|||||| &5' --------GTTGGGTTCCAGGG 3' Brap mmu-miR-3475 beg:1516 end:1537 pic:3' AAGTTTGGTACA-CGGAGGTCT 5'& |||.| || |..|||||| &5' -TCAGAA---GTAGTTTCCAGA 3' Brap mmu-miR-3475 beg:845 end:867 pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||||| || .||||||| &5' -TCAAAGGCTGCTTCTCCAGA 3' Brap mmu-miR-3475 beg:372 end:390 pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||| |||||.|||. &5' ------CCAGCTGCCTTCAGG 3' Brap mmu-miR-34a beg:382 end:406 pic:3' TGTTGGTCGA-TTCT---GTGACGGT 5'& .||| |.|| ||||||| &5' ----TCAGGAGAGGAGCCCACTGCC- 3' Brap mmu-miR-34a beg:1413 end:1435 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||| |.|| ||||||..| &5' --AACGCGTTAC-ACACTGTTA 3' Brap mmu-miR-34b-5p beg:387 end:406 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& || .| ||||||| &5' ------AGAGGAGCCCACTGCC- 3' Brap mmu-miR-362-5p beg:169 end:187 pic:3' TAAGTGTGGATCCAAGGTTCCTAA 5'& .|||.| ||||||.| &5' ----GCACTTC----CCAAGGGT- 3' Brap mmu-miR-367 beg:225 end:244 pic:3' AGTGGTAACGATTTCACGTTAA 5'& ||| ||| ||||..|| &5' ---CCAG-GCTT--GTGCGGTT 3' Brap mmu-miR-376astar beg:284 end:300 pic:3' TGAGTATCTTCCTCTTAGATGG 5'& |.|| ||||||. &5' --------AGGGTAAATCTAT- 3' Brap mmu-miR-431 beg:674 end:687 pic:3' ACGTACTGCCGGACGTTCTGT 5'& || |||.||. &5' ----------CCAGCAGGAT- 3' Brap mmu-miR-431star beg:711 end:736 pic:3' TCTTCGG-GAC-GTTCTGCTGGAC 5'& |||.||| ||| |||| .|||. &5' AGAGGCCTCTGACAAGCTGACT-- 3' Brap mmu-miR-449a beg:386 end:406 pic:3' TGGTCGATTGTTATGTGACGGT 5'& .| |. |. ||||||| &5' ---GGAGAGGAGCCCACTGCC- 3' Brap mmu-miR-449b beg:1562 end:1582 pic:3' CGGTCGATTGTTGTGACGGA 5'& ||||| |.| ..||||| &5' -CCAGC-AGCCCTGCTGCC- 3' Brap mmu-miR-449b beg:387 end:406 pic:3' CGGTCGA-TTGTTGTGACGGA 5'& || |.| ||||||| &5' ---AGAGGAGCC-CACTGCC- 3' Brap mmu-miR-449b beg:1416 end:1434 pic:3' CGGTCGAT-TGTTGTGACGGA 5'& || || ||||||.. &5' ----GCGTTAC-ACACTGTT- 3' Brap mmu-miR-450a-3p beg:850 end:866 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& || || ||.|||. &5' ------GCT--GCTTCTCCAG- 3' Brap mmu-miR-450a-3p beg:161 end:183 pic:3' TACTTA--CGTTTCGT-AGGGGTTA 5'& |..| || |||| |.||||| &5' --GGGTTGGC--AGCACTTCCCAA- 3' Brap mmu-miR-450b-3p beg:1659 end:1676 pic:3' TACGTACGTTTTACAAGGGTTA 5'& |||.|. |||.|||| &5' ------GCAGAG-GTTTCCAA- 3' Brap mmu-miR-450b-3p beg:166 end:183 pic:3' TACGTACGTTTTACAAGGGTTA 5'& ||| ||| ||||||| &5' --GCA-GCAC----TTCCCAA- 3' Brap mmu-miR-450b-5p beg:1255 end:1267 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||||||.|. &5' -------------ACTGCAGAG 3' Brap mmu-miR-450b-5p beg:1310 end:1330 pic:3' ATAAGTCCTTGTA-TGACGTTTT 5'& |||| || ||||||.| &5' ----CAGGC-CAGCACTGCAGA- 3' Brap mmu-miR-450b-5p beg:396 end:416 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& || .| ||||||.|| &5' ----CACT-GCCCACTGCAGAA 3' Brap mmu-miR-450b-5p beg:253 end:278 pic:3' ATAAGTCC-TTGTATG-ACGTTTT 5'& ||||||| ..|. || ||||. &5' TATTCAGTTGGCGCACTTGCAG-- 3' Brap mmu-miR-483 beg:430 end:451 pic:3' GAGGGAAGAGAAGAGGGCAGAA 5'& |||||| | |||||||.| | &5' CTCCCTCC-CTTCTCCTG-C-- 3' Brap mmu-miR-488 beg:1677 end:1696 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& | ||| .|.||||.|| &5' ---CTTGAA--GGTCTTTTAA 3' Brap mmu-miR-490 beg:480 end:500 pic:3' GTCGTACCTCAGGA--GGTCCAAC 5'& ||| |.|||||| &5' -------GAGAAAGGGCTAGGTTG 3' Brap mmu-miR-493 beg:1104 end:1125 pic:3' GGACCGTGTGTCA-TCCTGGAAGT 5'& | ||||| .||||.||. &5' ---GTCACACTTTAGGGACTTTT- 3' Brap mmu-miR-493 beg:369 end:388 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& ||| | ||| .|||||| &5' ---GGC-C-CAGCT--GCCTTCA 3' Brap mmu-miR-497 beg:1182 end:1203 pic:3' ATGTTTGGTGTC----ACACGACGAC 5'& ||||. ||||.||||| &5' ------CCACGTTGCCTGTGTTGCTG 3' Brap mmu-miR-503 beg:726 end:750 pic:3' GACGTCATGACA-AGGGCGACGAT 5'& || |||| |. .|.||||. &5' --GCTG-ACTGACTTGTGTTGCTG 3' Brap mmu-miR-503star beg:1578 end:1603 pic:3' GGTC-CGTCACCTTTGTTATGAG 5'& |||| | || |.||.|.||. &5' CCAGAGGAGAGT-AGCAGTGCTT 3' Brap mmu-miR-503star beg:1208 end:1231 pic:3' GGTCC-GTCACCTTTGTTATGAG 5'& |||| |||||||| .|.|| &5' CCAGTTCAGTGGAAT--GTGCT- 3' Brap mmu-miR-509-5p beg:1474 end:1494 pic:3' TACTAACGGTGTAAGACCTCAT 5'& |||| ||||.||. &5' ----TTGCAGAAG-CTGGGGTG 3' Brap mmu-miR-509-5p beg:532 end:552 pic:3' TACTAACGG----TGTAAGACCTCAT 5'& ||. .|| ||||||| &5' ------GCTTGGGGCAAA-TGGAGTA 3' Brap mmu-miR-540-3p beg:1457 end:1478 pic:3' GGTCCTAGC-TGGAGACTGGA 5'& | |.| || |||||||| &5' ---GTCTTGCACATCTGACCT 3' Brap mmu-miR-540-3p beg:282 end:303 pic:3' GGTCCTAGCTGGAGACTGGA 5'& |||||.| |.|| |||| &5' CCAGGGTAAATCTATGAC-- 3' Brap mmu-miR-540-3p beg:1142 end:1165 pic:3' GGTCCT--AGCTGGAGACTGGA 5'& | ||| ||| |||.||||| &5' -CTGGACCTCGTCCTTTGACC- 3' Brap mmu-miR-540-3p beg:37 end:56 pic:3' GGTCCTAGCTGGAGACTGGA 5'& ||||.|| .|. ||||| &5' -CAGGGTCTGCTGG-GACCT 3' Brap mmu-miR-540-5p beg:37 end:58 pic:3' TGTCTCAGTCTCCCACTGGGAAC 5'& |||.||| | || ||||.||| &5' -CAGGGTCTGCTGG-GACCTTTG 3' Brap mmu-miR-542-3p beg:1091 end:1111 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& || |.|| ||||||| &5' ----AGGT-TTAAAATGTCACA 3' Brap mmu-miR-542-5p beg:6 end:23 pic:3' AGCACTGTACTACTAGGGGCTC 5'& ||| || ||||.||| &5' ----GACT---TG-TCCCTGAG 3' Brap mmu-miR-544 beg:393 end:416 pic:3' CTCGA---ACGATTTTTACGTCTTA 5'& |||| ||| ||||||| &5' GAGCCCACTGCCCAC--TGCAGAA- 3' Brap mmu-miR-665 beg:11 end:32 pic:3' TCCCTGGAGTC-GGAGGACCA 5'& | ||| || |.|||||| &5' --GTCCCTGAGACTTCCTGG- 3' Brap mmu-miR-666-5p beg:1175 end:1196 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& | |||| | ||||.|. &5' ---TGTCACCACGTTGCCTGT- 3' Brap mmu-miR-666-5p beg:1032 end:1058 pic:3' CCGA-GAGTGTCGACACGGG-CGA 5'& ||| .| |||||||||. |. &5' GGCAGTTGACAGCTGTGTGTAGT- 3' Brap mmu-miR-668 beg:560 end:578 pic:3' CCATCACCCGGCTCGGCTCACTGT 5'& ||| || ||||||| &5' ------GGGAAGAC---AGTGACA 3' Brap mmu-miR-669g beg:1173 end:1198 pic:3' TAGTACAGTTGTGT-ATGT-TACGT 5'& ||||||| |||. |.| .||. &5' --CATGTCACCACGTTGCCTGTGT- 3' Brap mmu-miR-671-3p beg:1143 end:1168 pic:3' CCACCT----CGGGACTCTTGGCCT 5'& |||| |.||| .|||||| &5' --TGGACCTCGTCCTTT-GACCGGA 3' Brap mmu-miR-671-5p beg:631 end:654 pic:3' GAGG-TCGGGGAGGTCCCGAAGGA 5'& ||| .||.|||.| || || &5' -TCCTGGCTCCTTCTCAGC-TC-- 3' Brap mmu-miR-673-5p beg:1623 end:1642 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || .||| .||||||. &5' --CCTGGGAA---GGCTGTGG- 3' Brap mmu-miR-674 beg:1202 end:1222 pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& ||||. ||| .|||||| &5' --CACCG-TCCAG-TTCAGTG- 3' Brap mmu-miR-679 beg:1424 end:1441 pic:3' TGGTTCTCAGTGG-AGTGTCAGG 5'& |||. |.||||||. &5' ---------CACTGTTACAGTCT 3' Brap mmu-miR-684 beg:555 end:571 pic:3' AACTGAACT--TCCCTTTTGA 5'& | ||||||.|| &5' -------GTTTAGGGAAGAC- 3' Brap mmu-miR-686 beg:1636 end:1654 pic:3' AGAAGTGG-CAGACCCTTCGTTA 5'& | .|| || |||||||. &5' ---TGGCCAGT---GGAAGCAG- 3' Brap mmu-miR-687 beg:274 end:293 pic:3' AGTAACGACGTAAGGTCCTATC 5'& |.|| .|||||||.|| &5' -----GTTGGGTTCCAGGGTA- 3' Brap mmu-miR-692 beg:449 end:466 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||| | |.||||| &5' ----GAGTAGA--AGAGAGA- 3' Brap mmu-miR-692 beg:378 end:393 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& || ||. |.|||| &5' -------GC-CTTCAGGAGA- 3' Brap mmu-miR-693-3p beg:459 end:471 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& ||.|||||| &5' --------------GAGAGCTGC 3' Brap mmu-miR-693-3p beg:840 end:858 pic:3' AATGTCGGTGTAGAC-TTTCGACG 5'& |.|.| ||.||||| &5' ---------CGTTTCAAAGGCTGC 3' Brap mmu-miR-693-3p beg:1521 end:1541 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& ||. || |.||||| &5' ----AGTAGTTTCC-AGAGCTG- 3' Brap mmu-miR-693-5p beg:96 end:118 pic:3' CTTTTGAAAGCC--TACACCGAC 5'& .|||| .|| |||||||| &5' --GAACTG-TGGTCATGTGGCT- 3' Brap mmu-miR-694 beg:1108 end:1127 pic:3' GAAGTCCGTTGTAAAAGTC 5'& |||.||| .|| ||||. &5' CTTTAGG-GACTTTTTT-- 3' Brap mmu-miR-704 beg:1162 end:1182 pic:3' GATCCTCGTCTCGTGTACAGA 5'& ||| ||||||| &5' ---GGAATGTCTGACATGTC- 3' Brap mmu-miR-704 beg:461 end:480 pic:3' GATCCTCGTCTCG--TGTACAGA 5'& |||| || .|||||| &5' ----GAGCT--GCTTGCATGTC- 3' Brap mmu-miR-708 beg:102 end:122 pic:3' GGGTCGATCTA-ACATTCGAGGAA 5'& |.| ||| .||||||| &5' ------TGGTCATGT-GGCTCCTT 3' Brap mmu-miR-708 beg:626 end:646 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& ||| .||||||| &5' ---AGCCTTCCT---GGCTCCTT 3' Brap mmu-miR-709 beg:364 end:387 pic:3' AGGAGGA--CGGA--GACGGAGG 5'& ||| | ||| ||||||.| &5' TCC-CAGAGGCCCAGCTGCCTTC 3' Brap mmu-miR-709 beg:629 end:649 pic:3' AGGAGGACGGAGACGGAGG 5'& |.||||| ||| .||| &5' -CTTCCTGGCTCCTTCTC- 3' Brap mmu-miR-709 beg:197 end:214 pic:3' AGGAGGACGG--AGACGGAGG 5'& ||| |||||||.| &5' -------GCCATTCTGCCTTC 3' Brap mmu-miR-709 beg:417 end:437 pic:3' AGGAGGACGG-AGACGGAGG 5'& ..||||||| || ||||| &5' -TTTCCTGCCATC--CCTCC 3' Brap mmu-miR-710 beg:975 end:995 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& |.||.| | ||||||| &5' -TTAATTGAA--C-AGACTTG- 3' Brap mmu-miR-713 beg:1043 end:1065 pic:3' CGACACACGGAAGTCACGT 5'& ||||||||. || || &5' GCTGTGTGTAGTAAGGACA 3' Brap mmu-miR-744 beg:1442 end:1458 pic:3' ACGACAATCGGGATCGGGGCGT 5'& .||.| |||||.|| &5' -------GGCTC-AGCCCTGC- 3' Brap mmu-miR-744star beg:153 end:174 pic:3' TCCAAC-TCCAATCACCGTTGTC 5'& ||| | ||| |||||.|| &5' AGGGGGAAGGGT--TGGCAGCA- 3' Brap mmu-miR-759 beg:197 end:210 pic:3' CAGTTTTAACAAAC-GTGAGACG 5'& | ||.||||| &5' -------------GCCATTCTGC 3' Brap mmu-miR-760 beg:1382 end:1402 pic:3' AGGGGTGTCT-GGGTCTCGGC 5'& ||.| .|||||||. &5' ---CCGCCTCTTCCAGAGCT- 3' Brap mmu-miR-760 beg:1517 end:1541 pic:3' AGGGGTGTCT-------GGGTCTCGGC 5'& |||| .|||||||.| &5' ------CAGAAGTAGTTTCCAGAGCTG 3' Brap mmu-miR-760 beg:362 end:384 pic:3' AGGGGTGTCTGGGTCT-CGGC 5'& .|||| ||.||||| ||| &5' -TCCCAGAGGCCCAGCTGCC- 3' Brap mmu-miR-763 beg:197 end:221 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& ||||.| | |.|||||||| &5' GCCATTCTG-CCTTCCAGCTGG 3' Brap mmu-miR-764-3p beg:704 end:724 pic:3' TGTCAACGGTGATA--CCGGAGGA 5'& ||||. ||||||. &5' ------GCCATCGAGAGGCCTCT- 3' Brap mmu-miR-764-5p beg:560 end:580 pic:3' TCCTCCTGTACACTCGTGG 5'& .||| |||| |||| || | &5' GGGAAGACA-GTGA-CAGC 3' Brap mmu-miR-7a beg:1375 end:1397 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ..||.| |.| ||||||| &5' --GGCAGAGCCGCC--TCTTCCA 3' Brap mmu-miR-7a beg:873 end:893 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||.||.|. | | ||||||| &5' -CAGCAGAG-C-C---TCTTCCA 3' Brap mmu-miR-7b beg:1376 end:1397 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ..||.| |.| ||||||| &5' --GGCAGAGCCGCC--TCTTCCA 3' Brap mmu-miR-7b beg:873 end:893 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||.||.|. | | ||||||| &5' -CAGCAGAG-C-C---TCTTCCA 3' Brap mmu-miR-802 beg:1189 end:1204 pic:3' TTCCTACTTAGAAACAATGACT 5'& || ||||.|||| &5' ----------CTGTGTTGCTGA 3' Brap mmu-miR-874 beg:1294 end:1316 pic:3' AGCCAGGGAGCCCGGTCCCGTC 5'& ||| |.|| .|||||||| &5' -CGGCTCTTCC--TCAGGGCAG 3' Brap mmu-miR-879 beg:704 end:724 pic:3' CCGAAT-CTCGATATTCGGAGA 5'& || ||| |.|||||| &5' -GCCATCGAG----AGGCCTCT 3' Brap mmu-miR-879 beg:868 end:889 pic:3' CCGAATCTCGATATTCGGAGA 5'& ||||| ||| .||||||| &5' GGCTTC-AGCA--GAGCCTCT 3' Brap mmu-miR-883a-3p beg:259 end:281 pic:3' TATGACTCTCGAC--AACGTCAAT 5'& | .|| ||||||||. &5' -----GTTGGCGCACTTGCAGTTG 3' Brap mmu-miR-883a-3p beg:228 end:244 pic:3' TATGACTCTCGACAACGTCAAT 5'& .||| |||.||| &5' --------GGCTTGTGCGGTT- 3' Brap mmu-miR-883b-3p beg:269 end:281 pic:3' TATGACTCTCTACAACGTCAAT 5'& ||||||||. &5' -------------TTGCAGTTG 3' Brap mmu-miR-883b-3p beg:227 end:244 pic:3' TATGACTCTCTACAACGTCAAT 5'& ||. || |||.||| &5' ------AGGCTTG-TGCGGTT- 3' Brap mmu-miR-93star beg:511 end:528 pic:3' GCCCTTCACGATCG--AGTCGTCA 5'& ||| |. ||||||| &5' --------GCTTGTCTTCAGCAG- 3' Brap mmu-miR-93star beg:866 end:882 pic:3' GCCCTTCACGATCG-AGTCGTCA 5'& ||.|| ||||||| &5' ---------CTGGCTTCAGCAG- 3' Brap mmu-miR-93star beg:1626 end:1649 pic:3' GCCCTTCACGA--TCGAGTCGTCA 5'& |||||| ||| .|| ||| | &5' -GGGAAG-GCTGTGGC-CAGTGG- 3' Brap mmu-miR-96 beg:603 end:622 pic:3' TCGTTTTTACACGATCACGGTTT 5'& .|||||||| ||.||| &5' ----GAAATGTGCC--TGTCAA- 3' Brap mmu-miR-325 beg:608 end:625 pic:3' AACTATCCTCCACG---AGTTATTT 5'& |||| |||||||. &5' ----------GTGCCTGTCAATAAG 3' Brap mmu-miR-433star beg:1196 end:1211 pic:3' CTTATTACTGTCCGAGTGGCAT 5'& .| ||||||| &5' --------GCTGA-TCACCGT- 3' Brap mmu-miR-376b beg:285 end:302 pic:3' TTCACCTACAAGGAGATACTA 5'& ||.| ||||||| &5' ----GGGTAAA--TCTATGA- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Brap RAID00060834 mmu-miR-7094-3p miRNA MIMAT0028095 Brap mRNA 72399 Prediction 0.1828 Brap RAID00067335 mmu-miR-302a-3p miRNA MIMAT0000380 Brap mRNA 72399 Prediction 0.1828 Brap RAID00099397 mmu-miR-542-3p miRNA MIMAT0003172 Brap mRNA 72399 Prediction 0.1828 Brap RAID00105869 mmu-miR-3103-3p miRNA MIMAT0014938 Brap mRNA 72399 Prediction 0.1828 Brap RAID00110201 mmu-miR-212-3p miRNA MIMAT0000659 Brap mRNA 72399 Prediction 0.1828 Brap RAID00126775 mmu-miR-1231-5p miRNA MIMAT0022357 Brap mRNA 72399 Prediction 0.1828 Brap RAID00130818 mmu-miR-376b-3p miRNA MIMAT0001092 Brap mRNA 72399 Prediction 0.1828 Brap RAID00140353 mmu-miR-136-5p miRNA MIMAT0000148 Brap mRNA 72399 Prediction 0.1828 Brap RAID00388260 mmu-miR-6348 miRNA MIMAT0025091 Brap mRNA 72399 Prediction 0.1828 Brap RAID00428691 mmu-miR-294-3p miRNA MIMAT0000372 Brap mRNA 72399 Prediction 0.1828 Brap RAID00449006 mmu-miR-7064-3p miRNA MIMAT0028033 Brap mRNA 72399 Prediction 0.1828 Brap RAID00468550 mmu-miR-6992-5p miRNA MIMAT0027886 Brap mRNA 72399 Prediction 0.1828 Brap RAID00487737 mmu-miR-181b-5p miRNA MIMAT0000673 Brap mRNA 72399 Prediction 0.1828 Brap RAID00536762 mmu-miR-7224-3p miRNA MIMAT0028417 Brap mRNA 72399 Prediction 0.1828 Brap RAID00557975 mmu-miR-216a-5p miRNA MIMAT0000662 Brap mRNA 72399 Prediction 0.1828 Brap RAID00640800 mmu-miR-1258-5p miRNA MIMAT0029904 Brap mRNA 72399 Prediction 0.1828 Brap RAID00651453 mmu-miR-10a-5p miRNA MIMAT0000648 Brap mRNA 72399 Prediction 0.1828 Brap RAID00662288 mmu-miR-370-3p miRNA MIMAT0001095 Brap mRNA 72399 Prediction 0.1828 Brap RAID00691309 mmu-miR-30a-5p miRNA MIMAT0000128 Brap mRNA 72399 Prediction 0.1828 Brap RAID00694920 mmu-miR-543-3p miRNA MIMAT0003168 Brap mRNA 72399 Prediction 0.1828 Brap RAID00751472 mmu-miR-653-5p miRNA MIMAT0004943 Brap mRNA 72399 Prediction 0.1828 Brap RAID00800613 mmu-miR-339-5p miRNA MIMAT0000584 Brap mRNA 72399 Prediction 0.1828 Brap RAID00842452 mmu-miR-421-3p miRNA MIMAT0004869 Brap mRNA 72399 Prediction 0.1828 Brap RAID00864890 mmu-miR-6999-5p miRNA MIMAT0027900 Brap mRNA 72399 Prediction 0.1828 Brap RAID00899576 mmu-miR-132-3p miRNA MIMAT0000144 Brap mRNA 72399 Prediction 0.1828 Brap RAID00923130 mmu-miR-9-5p miRNA MIMAT0000142 Brap mRNA 72399 Prediction 0.1828 Brap RAID00929528 mmu-miR-330-5p miRNA MIMAT0004642 Brap mRNA 72399 Prediction 0.2202 Brap RAID00941629 mmu-miR-30d-5p miRNA MIMAT0000515 Brap mRNA 72399 Prediction 0.1828 Brap RAID00953001 mmu-miR-18a-5p miRNA MIMAT0000528 Brap mRNA 72399 Prediction 0.1828 Brap RAID00976252 mmu-miR-1192 miRNA MIMAT0005850 Brap mRNA 72399 Prediction 0.1828 Brap RAID01089368 mmu-miR-3113-5p miRNA MIMAT0014959 Brap mRNA 72399 Prediction 0.1828 Brap RAID01093518 mmu-miR-145a-5p miRNA MIMAT0000157 Brap mRNA 72399 Prediction 0.2202 Brap RAID01105230 mmu-miR-721 miRNA MIMAT0003515 Brap mRNA 72399 Prediction 0.1828 Brap RAID01108101 mmu-miR-101b-3p miRNA MIMAT0000616 Brap mRNA 72399 Prediction 0.1828 Brap RAID01114233 mmu-miR-875-5p miRNA MIMAT0004937 Brap mRNA 72399 Prediction 0.1828 Brap RAID01154981 mmu-miR-590-3p miRNA MIMAT0004896 Brap mRNA 72399 Prediction 0.1828 Brap RAID01301000 mmu-miR-155-5p miRNA MIMAT0000165 Brap mRNA 72399 Prediction 0.1828 Brap RAID01301603 mmu-miR-7054-5p miRNA MIMAT0028012 Brap mRNA 72399 Prediction 0.1828 Brap RAID01364429 mmu-miR-679-3p miRNA MIMAT0017248 Brap mRNA 72399 Prediction 0.1828 Brap RAID01388352 mmu-miR-192-5p miRNA MIMAT0000517 Brap mRNA 72399 Prediction 0.1828 Brap RAID01436315 mmu-miR-760-3p miRNA MIMAT0003898 Brap mRNA 72399 Prediction 0.2202 Brap RAID01450968 mmu-miR-135b-5p miRNA MIMAT0000612 Brap mRNA 72399 Prediction 0.1828 Brap RAID01460917 mmu-miR-181a-5p miRNA MIMAT0000210 Brap mRNA 72399 Prediction 0.1828 Brap RAID01508717 mmu-miR-295-3p miRNA MIMAT0000373 Brap mRNA 72399 Prediction 0.1828 Brap RAID01534729 mmu-miR-130b-3p miRNA MIMAT0000387 Brap mRNA 72399 Prediction 0.1828 Brap RAID01554303 mmu-miR-216b-5p miRNA MIMAT0003729 Brap mRNA 72399 Prediction 0.1828 Brap RAID01604943 mmu-miR-181c-5p miRNA MIMAT0000674 Brap mRNA 72399 Prediction 0.1828 Brap RAID01637931 mmu-miR-302b-3p miRNA MIMAT0003374 Brap mRNA 72399 Prediction 0.1828 Brap RAID01641511 mmu-miR-291a-3p miRNA MIMAT0000368 Brap mRNA 72399 Prediction 0.1828 Brap RAID01659868 mmu-miR-882 miRNA MIMAT0004847 Brap mRNA 72399 Prediction 0.1828 Brap RAID01702195 mmu-miR-19b-3p miRNA MIMAT0000513 Brap mRNA 72399 Prediction 0.1828 Brap RAID01708442 mmu-miR-138-5p miRNA MIMAT0000150 Brap mRNA 72399 Prediction 0.1828 Brap RAID01718678 mmu-miR-365-3p miRNA MIMAT0000711 Brap mRNA 72399 Prediction 0.1828 Brap RAID01839089 mmu-miR-10b-5p miRNA MIMAT0000208 Brap mRNA 72399 Prediction 0.1828 Brap RAID01853437 mmu-miR-146b-5p miRNA MIMAT0003475 Brap mRNA 72399 Prediction 0.1828 Brap RAID01907551 mmu-miR-7239-3p miRNA MIMAT0028447 Brap mRNA 72399 Prediction 0.1828 Brap RAID02001786 mmu-miR-758-3p miRNA MIMAT0003889 Brap mRNA 72399 Prediction 0.1828 Brap RAID02088576 mmu-miR-6908-3p miRNA MIMAT0027717 Brap mRNA 72399 Prediction 0.1828 Brap RAID02098675 mmu-miR-301a-3p miRNA MIMAT0000379 Brap mRNA 72399 Prediction 0.1828 Brap RAID02140230 mmu-miR-135a-5p miRNA MIMAT0000147 Brap mRNA 72399 Prediction 0.1828 Brap RAID02200854 mmu-miR-194-5p miRNA MIMAT0000224 Brap mRNA 72399 Prediction 0.1828 Brap RAID02298284 mmu-miR-224-5p miRNA MIMAT0000671 Brap mRNA 72399 Prediction 0.1828 Brap RAID02325804 mmu-miR-320-3p miRNA MIMAT0000666 Brap mRNA 72399 Prediction 0.1828 Brap RAID02449075 mmu-miR-302d-3p miRNA MIMAT0003377 Brap mRNA 72399 Prediction 0.1828 Brap RAID02523428 mmu-miR-30e-5p miRNA MIMAT0000248 Brap mRNA 72399 Prediction 0.1828 Brap RAID02610733 mmu-miR-215-5p miRNA MIMAT0000904 Brap mRNA 72399 Prediction 0.1828 Brap RAID02654986 mmu-miR-326-3p miRNA MIMAT0000559 Brap mRNA 72399 Prediction 0.2202 Brap RAID02695268 mmu-miR-26a-5p miRNA MIMAT0000533 Brap mRNA 72399 Prediction 0.1828 Brap RAID02725459 mmu-miR-499-5p miRNA MIMAT0003482 Brap mRNA 72399 Prediction 0.1828 Brap RAID02743560 mmu-miR-301b-3p miRNA MIMAT0004186 Brap mRNA 72399 Prediction 0.1828 Brap RAID02755134 mmu-miR-873a-5p miRNA MIMAT0004936 Brap mRNA 72399 Prediction 0.1828 Brap RAID02782930 mmu-miR-296-3p miRNA MIMAT0004576 Brap mRNA 72399 Prediction 0.1828 Brap RAID03044336 mmu-miR-101a-3p miRNA MIMAT0000133 Brap mRNA 72399 Prediction 0.1828 Brap RAID03112195 mmu-miR-145a-3p miRNA MIMAT0004534 Brap mRNA 72399 Prediction 0.1828 Brap RAID03132346 mmu-miR-7036a-3p miRNA MIMAT0027977 Brap mRNA 72399 Prediction 0.1828 Brap RAID03208968 mmu-miR-292a-5p miRNA MIMAT0000369 Brap mRNA 72399 Prediction 0.1828 Brap RAID03241159 mmu-miR-290a-5p miRNA MIMAT0000366 Brap mRNA 72399 Prediction 0.1828 Brap RAID03254157 mmu-miR-130a-3p miRNA MIMAT0000141 Brap mRNA 72399 Prediction 0.1828 Brap RAID03347493 mmu-miR-181d-5p miRNA MIMAT0004324 Brap mRNA 72399 Prediction 0.1828 Brap RAID03351463 mmu-miR-383-5p miRNA MIMAT0000748 Brap mRNA 72399 Prediction 0.1828 Brap RAID03484462 mmu-miR-495-3p miRNA MIMAT0003456 Brap mRNA 72399 Prediction 0.1828 Brap RAID03502948 mmu-miR-199b-5p miRNA MIMAT0000672 Brap mRNA 72399 Prediction 0.1828 Brap RAID03524372 mmu-miR-374b-5p miRNA MIMAT0003727 Brap mRNA 72399 Prediction 0.1828 Brap RAID03541070 mmu-miR-384-5p miRNA MIMAT0004745 Brap mRNA 72399 Prediction 0.2202 Brap RAID03542848 mmu-miR-1a-3p miRNA MIMAT0000123 Brap mRNA 72399 Prediction 0.1828 Brap RAID03553235 mmu-miR-1251-5p miRNA MIMAT0014824 Brap mRNA 72399 Prediction 0.1828 Brap RAID03671364 mmu-miR-218-5p miRNA MIMAT0000663 Brap mRNA 72399 Prediction 0.1828 Brap RAID03730541 mmu-miR-504-5p miRNA MIMAT0004889 Brap mRNA 72399 Prediction 0.1828 Brap RAID03790042 mmu-miR-30b-5p miRNA MIMAT0000130 Brap mRNA 72399 Prediction 0.1828 Brap RAID03795636 mmu-miR-26b-5p miRNA MIMAT0000534 Brap mRNA 72399 Prediction 0.2202 Brap RAID03825668 mmu-miR-6372 miRNA MIMAT0025116 Brap mRNA 72399 Prediction 0.1828 Brap RAID03827125 mmu-miR-146a-5p miRNA MIMAT0000158 Brap mRNA 72399 Prediction 0.1828 Brap RAID03879116 mmu-miR-30c-5p miRNA MIMAT0000514 Brap mRNA 72399 Prediction 0.1828 Brap RAID03939490 mmu-miR-149-5p miRNA MIMAT0000159 Brap mRNA 72399 NGS (Next Generation Sequencing)//Prediction 0.6308 Brap RAID03955195 mmu-miR-299a-5p miRNA MIMAT0000377 Brap mRNA 72399 Prediction 0.1828 Brap RAID04022697 mmu-miR-342-3p miRNA MIMAT0000590 Brap mRNA 72399 Prediction 0.1828 Brap RAID04039599 mmu-miR-206-3p miRNA MIMAT0000239 Brap mRNA 72399 Prediction 0.1828 Brap RAID04043681 mmu-miR-18b-5p miRNA MIMAT0004858 Brap mRNA 72399 Prediction 0.1828