DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Trim21 | mmu-miR-34b-5p | beg:860 | end:878 | pic:3' TGTTAGTCGATTAATGTGACGGA 5'& ||| ||||||||| &5' -------GCTCAG-ACACTGCCT 3' |
Trim21 | mmu-miR-320 | beg:1049 | end:1065 | pic:3' AGCGGGAGAGTTGGGTCGAAAA 5'& || |.||||||| &5' -------CTAT-CTCAGCTTT- 3' |
Trim21 | mmu-miR-687 | beg:702 | end:719 | pic:3' AGTAACGACGTAAGGTCCTATC 5'& || |||||||| &5' -------TGAAAGCCAGGATA- 3' |
Trim21 | mmu-miR-504 | beg:189 | end:204 | pic:3' CTATCTCACGTCTGGTCCCAGA 5'& | || .||||||| &5' --------GGAG-TCAGGGTC- 3' |
Trim21 | mghv-miR-M1-1 | beg:77 | end:94 | pic:3' TTTCCTTCATGCC-GGTAAAGAT 5'& |. || ||||||||. &5' --------TGGGGACCATTTCTG 3' |
Trim21 | mmu-miR-1953 | beg:1056 | end:1068 | pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |.||||||| &5' ------------AGCTTTCCC- 3' |
Trim21 | mmu-miR-543 | beg:737 | end:755 | pic:3' TTCTTCAC-GTGG-CG-CTTACAAA 5'& | || || ||||||| &5' -------GACAAGAGCTGAATGTT- 3' |
Trim21 | mmu-miR-105 | beg:126 | end:142 | pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& .|||. |||||||| &5' GCCAT----------GCACTTGG 3' |
Trim21 | mmu-miR-1971 | beg:347 | end:365 | pic:3' AGAGTCGGGTCGGAAATG 5'& || ..| |||||||. &5' ---CATTTCTGCCTTTAT 3' |
Trim21 | mmu-miR-1981 | beg:347 | end:365 | pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& ||. ||| |||||||. &5' --CATTTCT-------GCCTTTAT 3' |
Trim21 | mmu-miR-3072star | beg:193 | end:206 | pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& || ||||||| &5' -----------TCAGGGTCCC- 3' |
Trim21 | mmu-miR-378star | beg:0 | end:11 | pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& .|||||||| &5' -------------GGTCAGGAG 3' |
Trim21 | mmu-miR-411 | beg:408 | end:424 | pic:3' GCATGCGATATGC-CAGATGAT 5'& |||| ||||||| &5' --------ATACCTGTCTACT- 3' |
Trim21 | mmu-miR-224 | beg:354 | end:372 | pic:3' TTGCCTTGGTGAT-CACTGAAT 5'& .|| .|| ||||||| &5' ------GCCTTTATGTGACTT- 3' |
Trim21 | mmu-miR-411star | beg:1095 | end:1115 | pic:3' CCAATCACCTGGCACAATGTAT 5'& |||| |. ||||||||| &5' ----AGTGT-CTTTGTTACATA 3' |
Trim21 | mmu-miR-802 | beg:578 | end:598 | pic:3' TTCCTACTTAGAAACAATGACT 5'& || |. |||||||||. &5' -----TGTTTTGTTGTTACTGG 3' |
Trim21 | mmu-miR-1192 | beg:566 | end:590 | pic:3' TTAAACCAGACAAACAAACAAA 5'& ..||||||.|||| |||||| &5' GGTTTGGTTTGTTGTTTTGTT- 3' |
Trim21 | mmu-miR-1192 | beg:612 | end:635 | pic:3' TTAAACCA--GACAAACAAACAAA 5'& ||| .||||||||||||| &5' ---TTGTTCGTTGTTTGTTTGTTT 3' |
Trim21 | mmu-miR-495 | beg:613 | end:632 | pic:3' TTCTTCACGTGGTACAAACAAA 5'& ||. ||||||||| &5' ------TGTTCGTTGTTTGTTT 3' |
Trim21 | mcmv-miR-m01-1 | beg:363 | end:386 | pic:3' GGCAAGCTGCAATA---AGAGGAGA 5'& .||| |.|.|||| &5' -----TGACTTCCTTTGTTTTCTCT 3' |
Trim21 | mcmv-miR-m108-2-3p | beg:177 | end:199 | pic:3' TGGCCAGTGAGCAGAG-------CTCAGTG 5'& ||| |||| |||||| &5' --------CTCATCTCTTTAAAGGAGTCA- 3' |
Trim21 | mcmv-miR-m59-1 | beg:91 | end:105 | pic:3' GACTGCCAGCTCC-GTGACGATT 5'& || .||||||. &5' -----------GGATACTGCTG- 3' |
Trim21 | mghv-miR-M1-3 | beg:92 | end:113 | pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& | ||| ||||||||.|| &5' ----GATACTGCTGCTCACTTC 3' |
Trim21 | mghv-miR-M1-3 | beg:31 | end:49 | pic:3' TTCGCGTTGAGGAC---GAGTGGAG 5'& || ||.||||| &5' ----------CCGGACACTTACCTC 3' |
Trim21 | mmu-let-7b | beg:1047 | end:1060 | pic:3' TTGGTGTGTTGGATGATGGAGT 5'& |||||.|||| &5' ------------TACTATCTCA 3' |
Trim21 | mmu-let-7c | beg:1047 | end:1060 | pic:3' TTGGTATGTTGGATGATGGAGT 5'& |||||.|||| &5' ------------TACTATCTCA 3' |
Trim21 | mmu-let-7c | beg:339 | end:362 | pic:3' TTGGTATGTTG--GATGATGGAGT 5'& || |||| .| ||.|||. &5' ---CAAACAAACATTTCTGCCTT- 3' |
Trim21 | mmu-let-7g | beg:1041 | end:1060 | pic:3' TTGACATGTTTGATGATGGAGT 5'& || |||||.|||| &5' ----GTTTCA--TACTATCTCA 3' |
Trim21 | mmu-let-7i | beg:1040 | end:1060 | pic:3' TTGTCGTGTTTGATGATGGAGT 5'& .|. |||||.|||| &5' ---GGTTTCA--TACTATCTCA 3' |
Trim21 | mmu-let-7i | beg:337 | end:362 | pic:3' TTGTCGTGTTTGAT--GATGGAGT 5'& .||| |||||| ||.|||. &5' GACAA-ACAAACATTTCTGCCTT- 3' |
Trim21 | mmu-miR-101astar | beg:214 | end:236 | pic:3' CGTAGTCGTGACAC-TATTGACT 5'& |.|||||| || |||||||| &5' GTATCAGC--TGGACATAACTGA 3' |
Trim21 | mmu-miR-1190 | beg:205 | end:225 | pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& ||. ||| |||||||. &5' GATGAAGGTA----TCAGCTGG 3' |
Trim21 | mmu-miR-130b | beg:117 | end:139 | pic:3' TACGGGAAAGTA-GTAACGTGAC 5'& .||..| |||| || |||||| &5' GTGTTC-TTCAGCCA-TGCACT- 3' |
Trim21 | mmu-miR-135astar | beg:36 | end:55 | pic:3' GCGGTGCC--GAGGTTAGGGATAT 5'& ||| |||| |||||.| &5' ---CACTTACCTCC--TCCCTGT- 3' |
Trim21 | mmu-miR-141star | beg:1017 | end:1046 | pic:3' AGGTTGTGACG-----TGACCTTCTAC 5'& |.| ||||| |.|||.||.| &5' TTCTCCACTGAATGGAATTGGGAGGT- 3' |
Trim21 | mmu-miR-143 | beg:869 | end:889 | pic:3' CTCGATGTCACGA-AGTAGAGT 5'& ||.| |||| ||||.|. &5' ---CTGCC-TGCTGTCATTTT- 3' |
Trim21 | mmu-miR-15a | beg:818 | end:838 | pic:3' GTGTTTGGTAATACACGACGAT 5'& . |||| |||||.|. &5' -GTGAACCCC----TGCTGTTG 3' |
Trim21 | mmu-miR-15b | beg:92 | end:107 | pic:3' ACATTTGGTACTAC-ACGACGAT 5'& ||| ||||||| &5' ----------GATACTGCTGCT- 3' |
Trim21 | mmu-miR-15b | beg:818 | end:838 | pic:3' ACATTTGGTACTACACGACGAT 5'& ||.|||| |||||.|. &5' -GTGAACCCC----TGCTGTTG 3' |
Trim21 | mmu-miR-15bstar | beg:274 | end:295 | pic:3' ATCTC-GTCGTTTATTACTAAGC 5'& |||| | ||| ||||||| &5' TAGATTCCGCA----ATGATTC- 3' |
Trim21 | mmu-miR-16 | beg:94 | end:107 | pic:3' GCGGTTATAAATGCACGACGAT 5'& ||| ||||||| &5' ----------TAC-TGCTGCT- 3' |
Trim21 | mmu-miR-181a | beg:735 | end:755 | pic:3' TGAGTGGCTG-TCGCAACTTACAA 5'& ||| || | |||||||| &5' -------GACAAGAGCTGAATGTT 3' |
Trim21 | mmu-miR-181c | beg:735 | end:755 | pic:3' TGAGTGGCTG-TC-CAACTTACAA 5'& ||| || | |||||||| &5' -------GACAAGAGCTGAATGTT 3' |
Trim21 | mmu-miR-181d | beg:735 | end:755 | pic:3' TGGGTGGCTGTTGTT-ACTTACAA 5'& ||||| |. |||||||| &5' -------GACAAGAGCTGAATGTT 3' |
Trim21 | mmu-miR-184 | beg:369 | end:390 | pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& ||.||.|. |||||.|||| &5' -CCTTTGTT--TTCTCTGTCC- 3' |
Trim21 | mmu-miR-1897-5p | beg:1010 | end:1032 | pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |||||. ||||||| | || &5' -CCCCTTATTCTCCA-CTGAA- 3' |
Trim21 | mmu-miR-1898 | beg:134 | end:153 | pic:3' CTAGGGGACACTTGGAACTGGA 5'& |.|| |..|||||| &5' -----CTTGGTCATTTTGACC- 3' |
Trim21 | mmu-miR-1902 | beg:642 | end:665 | pic:3' TTCAGTACG-GATGACGTGGAGA 5'& | |||| ||| |||||.||| &5' --GGAATGCTCTA-TGCACTTCT 3' |
Trim21 | mmu-miR-1907 | beg:86 | end:108 | pic:3' TGGAGGTCTAGGAGACGACGAG 5'& |..|| ||| ||||||||| &5' ATTTCTGGATA--CTGCTGCTC 3' |
Trim21 | mmu-miR-1907 | beg:815 | end:837 | pic:3' TGGAGGTCTA--GGAGACGACGAG 5'& .||| || ||||||.| &5' ----TCAGTGAACCCCTGCTGTT- 3' |
Trim21 | mmu-miR-192 | beg:663 | end:682 | pic:3' CCGACAGTTAAGTATCCAGTC 5'& |||| |||||| &5' --CTGTAAACCC--AGGTCA- 3' |
Trim21 | mmu-miR-1929 | beg:438 | end:462 | pic:3' GAGACGAGATA-TTTC---AGGATCTT 5'& |||. ||.| |||||||| &5' ----GCTTGCAGAAGGACTTCCTAGAA 3' |
Trim21 | mmu-miR-193 | beg:804 | end:823 | pic:3' TGACCCTGAAACATCCGGTCAA 5'& .||||| || ||.|||| &5' GCTGGGTCT-----GGTCAGT- 3' |
Trim21 | mmu-miR-193b | beg:804 | end:823 | pic:3' TCG-CCCTGAAACACCCGGTCAA 5'& || ||| || ||.|||| &5' -GCTGGGTCT-----GGTCAGT- 3' |
Trim21 | mmu-miR-193star | beg:302 | end:327 | pic:3' AGTAGAACGGGCGTT-TCTGGGT 5'& || |.| || .|||||| &5' -CAGACTCCTCACATTGGACCCA 3' |
Trim21 | mmu-miR-1940 | beg:1010 | end:1027 | pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& || |||| |.||||| &5' -------CC-CCTTA----TTCTCCA- 3' |
Trim21 | mmu-miR-194 | beg:980 | end:1002 | pic:3' AGGTGTACCTCAACG-ACAATGT 5'& .|| ||||| ||||||| &5' --TACCTGGAGATTTATGTTACA 3' |
Trim21 | mmu-miR-195 | beg:85 | end:107 | pic:3' CGGTTATAAAGAC-----ACGACGAT 5'& ||||||| ||||||| &5' ------ATTTCTGGATACTGCTGCT- 3' |
Trim21 | mmu-miR-1961 | beg:1047 | end:1060 | pic:3' AAGATTGATGATGGAGT 5'& |||||.|||| &5' -------TACTATCTCA 3' |
Trim21 | mmu-miR-1968 | beg:840 | end:863 | pic:3' TCAGGTGGTA-GGAATTGTCGACGT 5'& .||| |. ||||||||. &5' ---TCACAAGGCTACAACAGCTGT- 3' |
Trim21 | mmu-miR-196a | beg:964 | end:987 | pic:3' GGGTTGTTGTACTT-TGATGGAT 5'& |.| || |||||||. &5' ---AGCTTCAAAAATACTACCTG 3' |
Trim21 | mmu-miR-196b | beg:860 | end:879 | pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& .| ||| |||.|||. &5' ----GCT-CAGAC-ACTGCCTG 3' |
Trim21 | mmu-miR-196b | beg:966 | end:987 | pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& |. ||| |||||||. &5' -CTT-CAAAAAT--ACTACCTG 3' |
Trim21 | mmu-miR-1970 | beg:765 | end:788 | pic:3' GTTTCGG---ATAGGGGTCACTGTGT 5'& ||. ||||||||||||.| &5' ----GCTCAGTATCCCCAGTGATA-- 3' |
Trim21 | mmu-miR-199a-5p | beg:301 | end:322 | pic:3' CTTGTCCATCAGACTTGTGACCC 5'& ||||| || |||.||| &5' -AACAGAC--TCCTCACATTGG- 3' |
Trim21 | mmu-miR-199bstar | beg:301 | end:322 | pic:3' CTTGTCCATCAGATTTGTGACCC 5'& ||||| || |||.||| &5' -AACAGAC--TCCTCACATTGG- 3' |
Trim21 | mmu-miR-205 | beg:195 | end:216 | pic:3' GTCTGAGGCCACCTTACTTCCT 5'& |||. ||| |.||||||| &5' CAGGGTCCCA--GGATGAAGG- 3' |
Trim21 | mmu-miR-2134 | beg:189 | end:211 | pic:3' CGTGGGGCAAAGGGTTCTG 5'& | | .| | |||||.||. &5' GGAGTCAGGGTCCCAGGAT 3' |
Trim21 | mmu-miR-2135 | beg:440 | end:456 | pic:3' CAAAGCCGGGGTTCTGGAGA 5'& || |.|||.|| &5' ------GCAGAAGGACTTC- 3' |
Trim21 | mmu-miR-214 | beg:814 | end:836 | pic:3' TGACGGACAGACAC----GGACGACA 5'& ||| ||| |||||||| &5' -------GTCAGTGAACCCCTGCTGT 3' |
Trim21 | mmu-miR-2141 | beg:95 | end:115 | pic:3' TTGAAAAGACT-GTGGAGGA 5'& ||| ||| |||.|||| &5' -ACTG--CTGCTCACTTCCT 3' |
Trim21 | mmu-miR-214 | beg:1184 | end:1195 | pic:3' TGACGGACAGACACGGACGACA 5'& |||||.|| &5' -------------GCCTGTTG- 3' |
Trim21 | mmu-miR-2146 | beg:1008 | end:1028 | pic:3' GTGTACCTTGGG----AAGAGGTG 5'& ||||| |||||||| &5' -------AACCCCTTATTCTCCAC 3' |
Trim21 | mmu-miR-2146 | beg:1106 | end:1140 | pic:3' GTGTA----CCTTGGGA--------AGAGGTG 5'& .|||| | |||.| |||||| &5' TACATAAAAGTTACCTTGAGAAAGATCTCCA- 3' |
Trim21 | mmu-miR-218-2star | beg:69 | end:90 | pic:3' GCGCCAC-GAACTGTCTTGGTAC 5'& ||| || .|.||||| &5' ----GTGACTCCTGGGGACCAT- 3' |
Trim21 | mmu-miR-21star | beg:816 | end:838 | pic:3' CTGTCGGGTAGCTGACGACAAC 5'& |||. | | ||||||||| &5' --CAGTGAA-CCCCTGCTGTTG 3' |
Trim21 | mmu-miR-223 | beg:748 | end:764 | pic:3' ACCCCATAAACTGTTTGACTGT 5'& || .| ||||||| &5' ---------TGTTACACTGACA 3' |
Trim21 | mmu-miR-22star | beg:435 | end:454 | pic:3' ATTTCGAACGGTGACTTCTTGA 5'& .|||||| ||||.||| &5' ---GGCTTGCA---GAAGGACT 3' |
Trim21 | mmu-miR-291b-3p | beg:129 | end:140 | pic:3' TGTTTGTTTTACCTACGTGAAA 5'& |||||||| &5' -------------ATGCACTT- 3' |
Trim21 | mmu-miR-291b-3p | beg:642 | end:663 | pic:3' TGTTTGTTTTACC---TACGTGAAA 5'& ..|||| |||||||| &5' ------GGAATGCTCTATGCACTT- 3' |
Trim21 | mmu-miR-297c | beg:524 | end:549 | pic:3' TGTACATGTACGTGTGTATGTA 5'& |.|| ||.|||||.|||||..| &5' ATATATATATGCATACATATGT 3' |
Trim21 | mmu-miR-29astar | beg:917 | end:939 | pic:3' GACTTGTGGTTTTCTTTAGTCA 5'& |||| | |||||.||| &5' -TGAAGAAAGT--GAAATTAGT 3' |
Trim21 | mmu-miR-29bstar | beg:698 | end:715 | pic:3' ATTTGGTGGTATAC-TTTGGTCG 5'& || ||| ||.|||| &5' --------CAAATGAAAGCCAG- 3' |
Trim21 | mmu-miR-30astar | beg:218 | end:239 | pic:3' CGACGTTTGTAGGCTGACTTTC 5'& |||| .|||| |||||||| &5' GCTG--GACATA--ACTGAAAG 3' |
Trim21 | mmu-miR-30estar | beg:218 | end:239 | pic:3' CGACATTTGTAGGCTGACTTTC 5'& |||| .|||| |||||||| &5' GCTG--GACATA--ACTGAAAG 3' |
Trim21 | mmu-miR-322 | beg:90 | end:107 | pic:3' AGGTTTTGTACTTA--ACGACGAC 5'& ||.|| ||||||| &5' ---------TGGATACTGCTGCT- 3' |
Trim21 | mmu-miR-325 | beg:806 | end:826 | pic:3' AACTATCCTCCACGAGTTATTT 5'& | |.|| || |||.|.|| &5' --GCTGGGTC-TGGTCAGTGAA 3' |
Trim21 | mmu-miR-335-3p | beg:709 | end:731 | pic:3' CCAGTCCTCG-TTATTACTTTTT 5'& ||||| |.||.|||||. &5' ---CAGGATAAAGTAGTGAAAG- 3' |
Trim21 | mmu-miR-337-3p | beg:729 | end:751 | pic:3' TCCGTAGTATATCCTCGACTT 5'& ||. ||| |||||||| &5' -GGT-TCAGACAAGAGCTGAA 3' |
Trim21 | mmu-miR-337-3p | beg:932 | end:946 | pic:3' TCCGTAGTATATCCTCGACTT 5'& ||| ||||||| &5' ----------TAGTAGCTGAA 3' |
Trim21 | mmu-miR-342-5p | beg:753 | end:780 | pic:3' GAGTTAGTGTC-TA----TCGTGGGGA 5'& || | |||| || ||.|.||| &5' --CACTGACAGTATGCTCAGTATCCC- 3' |
Trim21 | mmu-miR-344 | beg:393 | end:413 | pic:3' TGTCAGTCCGAAACCGATCTAGT 5'& ||.| |||||||||||| &5' ---GTTAC-CTTTGGCTAGAT-- 3' |
Trim21 | mmu-miR-3475 | beg:109 | end:130 | pic:3' AAGTTTGGTA---CAC-GGAGGTCT 5'& || ||| .||.||| &5' ------CCTGTTGGTGTTCTTCAG- 3' |
Trim21 | mmu-miR-34a | beg:855 | end:877 | pic:3' TGTTGGT-CGATTCTGTGACGGT 5'& ||.|.. ||| |||||||||| &5' -CAGCTGTGCTCAGACACTGCC- 3' |
Trim21 | mmu-miR-34c | beg:902 | end:920 | pic:3' CGTTAGTCGATTGATGTGACGGA 5'& ||.|.| ||.||||| &5' --------CTGATTCCATTGCCT 3' |
Trim21 | mmu-miR-34c | beg:854 | end:878 | pic:3' CGTTAGTCGAT-TGA---TGTGACGGA 5'& |||||. .|| ||||||||| &5' -----CAGCTGTGCTCAGACACTGCCT 3' |
Trim21 | mmu-miR-378 | beg:722 | end:739 | pic:3' GGAAGACTGAGGTTCAGGTCA 5'& ||| .||.||| &5' -----TGAAAGT-GGTTCAG- 3' |
Trim21 | mmu-miR-378star | beg:189 | end:201 | pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& |||||||||. &5' -----------GGAGTCAGGG- 3' |
Trim21 | mmu-miR-379 | beg:404 | end:424 | pic:3' GGATGCAAGGTATCAGATGGT 5'& ||| | || ||||||. &5' -CTAGATACCT--GTCTACT- 3' |
Trim21 | mmu-miR-380-3p | beg:983 | end:1004 | pic:3' TTCTACACCT---GGTATGATGTAT 5'& |||| ..||..|||||| &5' ------TGGAGATTTATGTTACATA 3' |
Trim21 | mmu-miR-383 | beg:551 | end:574 | pic:3' TCGGTGTCA-GTGGAAGACTAGA 5'& ||. ||.||||||.|.| &5' ---CATTATACATCTTCTGGTTT 3' |
Trim21 | mmu-miR-411star | beg:982 | end:1004 | pic:3' CCAATCACCT---GGCACAATGTAT 5'& |||| . ||||||||| &5' ------TGGAGATTTATGTTACATA 3' |
Trim21 | mmu-miR-421 | beg:98 | end:119 | pic:3' CG-CGGGTTAATTACAGACAACTA 5'& || ||.|| ||||||.| &5' GCTGCTCACTTC----CTGTTGGT 3' |
Trim21 | mmu-miR-421 | beg:1173 | end:1197 | pic:3' CGCGGGTTAATTACAGACAACTA 5'& | ||| ||| | |||||||| &5' --GATCAAATAAAGCCTGTTGAT 3' |
Trim21 | mmu-miR-421 | beg:818 | end:839 | pic:3' CGC---GGGTTAATTACAGACAACTA 5'& |.| ||| || ||||||| &5' GTGAACCCC------TG-CTGTTGA- 3' |
Trim21 | mmu-miR-432 | beg:1119 | end:1142 | pic:3' GACGGGTGACTAGAT---GAGGTTCT 5'& || .||| ||||||| &5' ----CC-TTGAGAAAGATCTCCAAG- 3' |
Trim21 | mmu-miR-448 | beg:520 | end:540 | pic:3' TACCCTGTAGG-ATGTATACGTT 5'& |.|| ||.||||||| &5' -----ATATATATATATATGCA- 3' |
Trim21 | mmu-miR-448 | beg:642 | end:660 | pic:3' TACCCTGTAGGATGTATACGTT 5'& ||| || || | |||||| &5' ---GGA-ATGCT-C-TATGCA- 3' |
Trim21 | mmu-miR-449a | beg:855 | end:877 | pic:3' TGGTCGATT---GTTATGTGACGGT 5'& |||||. ||. |||||||| &5' --CAGCTGTGCTCAG-ACACTGCC- 3' |
Trim21 | mmu-miR-449b | beg:855 | end:878 | pic:3' CGGTCGATTG----TTGTGACGGA 5'& |||||. .||||||||| &5' --CAGCTGTGCTCAGACACTGCCT 3' |
Trim21 | mmu-miR-449c | beg:855 | end:878 | pic:3' GGTCGAT-CGTTAC-GTGACGGA 5'& |||||. || | |||||||| &5' -CAGCTGTGCTCAGACACTGCCT 3' |
Trim21 | mmu-miR-450a-3p | beg:1122 | end:1140 | pic:3' TACTTACGTTTCGTAGGGGTTA 5'& |||. |||| |||.|||| &5' -TGAG---AAAG-ATCTCCAA- 3' |
Trim21 | mmu-miR-450a-3p | beg:282 | end:301 | pic:3' TACTTACGTTTCGTAGGGGTTA 5'& |||| |||.|||| &5' ------GCAATGATTCCTCAAT 3' |
Trim21 | mmu-miR-450a-3p | beg:761 | end:784 | pic:3' TACTTACGTTTCGTAGGGGTTA 5'& | |||| ||.|||||||.| &5' --GTATGCTCAGTATCCCCAGT 3' |
Trim21 | mmu-miR-452 | beg:658 | end:674 | pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& |||.||||.|||| &5' --------TTCTTCTGTAAAC- 3' |
Trim21 | mmu-miR-455 | beg:886 | end:908 | pic:3' CACATATACGGGCACCTGACG 5'& ||| |||||.. || ||| &5' GTGGATATGTTGGTTT-CTG- 3' |
Trim21 | mmu-miR-464 | beg:121 | end:143 | pic:3' ATAGAGTGTCT-TATTTGAACCAT 5'& |||. ||| ||. ||||||| &5' --TCTT-CAGCCATGCACTTGGT- 3' |
Trim21 | mmu-miR-465a-3p | beg:52 | end:64 | pic:3' AGATGAATCTTTCCGGGACTAG 5'& |.||||||| &5' -------------GTCCTGATC 3' |
Trim21 | mmu-miR-465b-3p | beg:52 | end:64 | pic:3' AGATGAATCTTTCCGGGACTAG 5'& |.||||||| &5' -------------GTCCTGATC 3' |
Trim21 | mmu-miR-465b-5p | beg:1141 | end:1163 | pic:3' GTCTAGTCGTGG-TAAGATTTAT 5'& || |. || |||||.|||| &5' ---ATTGGTTCCAATTCTGAATA 3' |
Trim21 | mmu-miR-465b-5p | beg:79 | end:99 | pic:3' GTCTAGTCGTGGT-AAGATTTAT 5'& .| |||| ||||..||| &5' ------GGGACCATTTCTGGATA 3' |
Trim21 | mmu-miR-465c-3p | beg:52 | end:64 | pic:3' AGATGAATCTTTCCGGGACTAG 5'& |.||||||| &5' -------------GTCCTGATC 3' |
Trim21 | mmu-miR-465c-5p | beg:1141 | end:1163 | pic:3' GTCTAGTCGCGG-TAAGATTTAT 5'& || |. || |||||.|||| &5' ---ATTGGTTCCAATTCTGAATA 3' |
Trim21 | mmu-miR-466a-5p | beg:523 | end:548 | pic:3' ATACATGTACATGTGTGTGTAT 5'& ||| ||.|| |.||.|||.||. &5' TATATATATATGCATACATATG 3' |
Trim21 | mmu-miR-466c-5p | beg:525 | end:550 | pic:3' ATACATGTACGTGTGTGTGTAG 5'& ||| ||.|||||.|||.|..|| &5' TATATATATGCATACATATGTC 3' |
Trim21 | mmu-miR-466d-5p | beg:525 | end:546 | pic:3' GTACATGTACATGCGTGTGTGT 5'& ||.|| ||.|||.|||.| &5' ----TATATATATGCATACATA 3' |
Trim21 | mmu-miR-466e-5p | beg:525 | end:550 | pic:3' ATACATGTACATGTGTGTGTAG 5'& ||| ||.||| |.|||.|..|| &5' TATATATATGCATACATATGTC 3' |
Trim21 | mmu-miR-467c | beg:126 | end:140 | pic:3' GTGTATATGTAC-GTGCGTGAAT 5'& | ||.||||||. &5' -----------GCCATGCACTTG 3' |
Trim21 | mmu-miR-467e | beg:524 | end:545 | pic:3' TGTATATGTACGAGTGTGAATA 5'& |.|||||.|||| .|||. &5' ATATATATATGCATACAT---- 3' |
Trim21 | mmu-miR-467h | beg:524 | end:545 | pic:3' TGTATATGTACGTGTGTGAATA 5'& |.|||||.|||||.|||. &5' ATATATATATGCATACAT---- 3' |
Trim21 | mmu-miR-470 | beg:46 | end:68 | pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& ||| || || || | .||||| &5' -CTC-CCTGT-CCTGATCAAGA- 3' |
Trim21 | mmu-miR-491 | beg:291 | end:317 | pic:3' GGAGTACCTTCCCA--AGGGGTGA 5'& ||||| ||| |||.||| &5' CCTCAATGAAACAGACTCCTCAC- 3' |
Trim21 | mmu-miR-497 | beg:82 | end:107 | pic:3' ATGTTTGGTGTC-AC-----ACGACGAC 5'& ..||||. || ||||||| &5' ---GGACCATTTCTGGATACTGCTGCT- 3' |
Trim21 | mmu-miR-503 | beg:814 | end:838 | pic:3' GAC-GTCATGACAAGGGCGACGAT 5'& | ||||. ||.||||.|. &5' --GTCAGTGAACC-CCTGCTGTTG 3' |
Trim21 | mmu-miR-503star | beg:2 | end:33 | pic:3' GGTCC---GTCACCT----TTGTTATGAG 5'& |||| ||||| .||..||||. &5' -CAGGAGCCAGTGCCTACTGACGGTACTT 3' |
Trim21 | mmu-miR-505 | beg:1181 | end:1197 | pic:3' TCTTTTGGTCGTTCACAACTGC 5'& |||.|| ||||||. &5' --AAAGCC------TGTTGAT- 3' |
Trim21 | mmu-miR-505 | beg:820 | end:840 | pic:3' TCTTTTGGTCGTTCACAACTGC 5'& ||| || || ||||||| &5' -GAACCCCTGC---TGTTGAC- 3' |
Trim21 | mmu-miR-665 | beg:63 | end:83 | pic:3' TCCCTGGAGTCG--GAGGACCA 5'& ||.| |||. ||||||| &5' ---GATC-CAGTGACTCCTGG- 3' |
Trim21 | mmu-miR-666-5p | beg:860 | end:881 | pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |||| ||| ||||.||| &5' -GCTCAGACAC---TGCCTGCT 3' |
Trim21 | mmu-miR-669a | beg:524 | end:546 | pic:3' TGTACTTGTACGTGTGTGTTGA 5'& |.|| |.|||||.|||.| &5' ATATATATATGCATACATA--- 3' |
Trim21 | mmu-miR-669d | beg:524 | end:549 | pic:3' TGTATATGTACGTGTGTGTTCA 5'& |.|||||.|||||.|||.| || &5' ATATATATATGCATACATATGT 3' |
Trim21 | mmu-miR-669e | beg:701 | end:719 | pic:3' TACTTGTACGTGTGTGTTCTGT 5'& ||| .| ||.||.| &5' ------ATGAAAGC-CAGGATA 3' |
Trim21 | mmu-miR-669h-3p | beg:529 | end:542 | pic:3' ACACGTACACACATATACGTAT 5'& |||||||||| &5' ------------TATATGCATA 3' |
Trim21 | mmu-miR-669h-5p | beg:116 | end:137 | pic:3' CGTGAGTTGATATGTGGGTACGTA 5'& | .|| || ||||||| &5' GTGTTCTT-----CAGCCATGCA- 3' |
Trim21 | mmu-miR-669k | beg:529 | end:542 | pic:3' AACGTACGCACATATACGTAT 5'& |||||||||| &5' -----------TATATGCATA 3' |
Trim21 | mmu-miR-669l | beg:524 | end:546 | pic:3' TGTATATGTACGTGTGTGTTGA 5'& |.|||||.|||||.|||.| &5' ATATATATATGCATACATA--- 3' |
Trim21 | mmu-miR-669o | beg:524 | end:546 | pic:3' TGTATTTGTACGTGTGTGTTGAT 5'& |.||| |.|||||.|||.| &5' ATATATATATGCATACATA---- 3' |
Trim21 | mmu-miR-673-3p | beg:629 | end:648 | pic:3' CCACGTGTCTTGAGTC-GGGGCCT 5'& | .|| |||.||| &5' --------GTTTTCCCTCCCTGGA 3' |
Trim21 | mmu-miR-677 | beg:1014 | end:1031 | pic:3' AGTCTTCGATTAGTAGTGACTT 5'& .|| || ||||||| &5' -------TTATTCTCCACTGAA 3' |
Trim21 | mmu-miR-693-5p | beg:427 | end:442 | pic:3' CTTTTGAAAGCCTACACCGAC 5'& || ||||||| &5' --------TCTTTTGTGGCT- 3' |
Trim21 | mmu-miR-704 | beg:534 | end:551 | pic:3' GATCCTCGTCTCGTGTACAGA 5'& ||| ||.|||||| &5' ------GCATA-CATATGTCT 3' |
Trim21 | mmu-miR-708star | beg:148 | end:163 | pic:3' GATCTTCGAGTGTCAGATCAAC 5'& | || |||||||| &5' ---------CCCA-TCTAGTTG 3' |
Trim21 | mmu-miR-711 | beg:38 | end:60 | pic:3' GAATGTAGAGAGGGGCCCAGGG 5'& ||||| || |||||. ||||. &5' CTTACCTC-CTCCCT--GTCCT 3' |
Trim21 | mmu-miR-743a | beg:1096 | end:1107 | pic:3' AGATGAGTCGAACCACAGAAAG 5'& |||||||| &5' -------------GTGTCTTT- 3' |
Trim21 | mmu-miR-743b-3p | beg:1086 | end:1107 | pic:3' AGATAAGTCGTACTACAGAAAG 5'& |||. .| || .||||||| &5' TCTGGATA-CAA-GTGTCTTT- 3' |
Trim21 | mmu-miR-743b-5p | beg:208 | end:229 | pic:3' ACTACCTGTGGTCAGACTTGT 5'& ||| || .|.||| |||.||| &5' TGAAGG-TATCAG-CTGGACA 3' |
Trim21 | mmu-miR-743b-5p | beg:1142 | end:1163 | pic:3' ACTACCTGTGGTC-AGACTTGT 5'& ||| ||| ||||||.| &5' ---TGGTT-CCAATTCTGAATA 3' |
Trim21 | mmu-miR-758 | beg:936 | end:958 | pic:3' ATC-ACCTGGTCCAGTGTTT 5'& ||| || ||.|| .||||| &5' TAGCTGAACTAGTATACAAA 3' |
Trim21 | mmu-miR-761 | beg:814 | end:836 | pic:3' ACACAGTCAAAGTGGGACGACG 5'& |||||| ||||||||. &5' ---GTCAGTGAACCCCTGCTGT 3' |
Trim21 | mmu-miR-761 | beg:862 | end:883 | pic:3' ACACAGTCAAAGTG--GGACGACG 5'& |||| ||| |||||||. &5' ----TCAGA--CACTGCCTGCTGT 3' |
Trim21 | mmu-miR-763 | beg:211 | end:226 | pic:3' CGGTGACCAAGAAGGGTCGACC 5'& ||| .||||||| &5' ------GGTA----TCAGCTGG 3' |
Trim21 | mmu-miR-767 | beg:859 | end:883 | pic:3' ACGAGTCTGT--TGGTACCACGT 5'& |||||||||| .|| || ||. &5' TGCTCAGACACTGCC-TGCTGT- 3' |
Trim21 | mmu-miR-7astar | beg:565 | end:583 | pic:3' ATACCGTCTGACACTAAACAAC 5'& |||. ||.||||||| &5' --TGGTT-----TGGTTTGTTG 3' |
Trim21 | mmu-miR-871 | beg:1140 | end:1163 | pic:3' GTAC-TGACCGTGATT-AGACTTAT 5'& | |.|||. |||||||| &5' ---GTATTGGTTCCAATTCTGAATA 3' |
Trim21 | mmu-miR-871 | beg:76 | end:99 | pic:3' GTACTGACCGTGATT--AGACTTAT 5'& |||| . ||||.||| &5' -----CTGGGGACCATTTCTGGATA 3' |
Trim21 | mmu-miR-872star | beg:719 | end:738 | pic:3' TCCTCCGATGACG-TTATCAAGT 5'& || || |.|.||||| &5' -------TAGTGAAAGTGGTTCA 3' |
Trim21 | mmu-miR-878-5p | beg:77 | end:99 | pic:3' ACAGAACTGTAGGTT--GATCTAT 5'& ||. . ||| ||.|||| &5' -----TGGGGACCATTTCTGGATA 3' |
Trim21 | mmu-miR-878-5p | beg:393 | end:414 | pic:3' ACAGAACTGTAGGTTGATCTAT 5'& |||. || |. .||||||| &5' TGTT---ACCTTTGGCTAGATA 3' |
Trim21 | mmu-miR-881star | beg:372 | end:387 | pic:3' TCTACACTGACAATAGAGAGAC 5'& .||| |.|||||| &5' --------TTGT--TTTCTCTG 3' |
Trim21 | mmu-miR-883a-5p | beg:754 | end:776 | pic:3' CATTGACGATGAAGAGAGTCGT 5'& |||| |||||.| &5' ---ACTGACAGTATGCTCAGTA 3' |
Trim21 | mmu-miR-883a-5p | beg:1047 | end:1062 | pic:3' CATTGACGATGAAGAGAGTCGT 5'& |||| ||||||| &5' --------TACTA-TCTCAGC- 3' |
Trim21 | mmu-miR-9 | beg:777 | end:795 | pic:3' AGTATGTCGATCTATTGGTTTCT 5'& |||. ||||.|||||| &5' -----CAGT--GATAGCCAAAG- 3' |
Trim21 | mmu-miR-1932 | beg:270 | end:290 | pic:3' GGCTGGATCGCGACAGGCGTTG 5'& |.||| ||| |||||||. &5' CTGACATAGAT---TCCGCAAT 3' |
Trim21 | mmu-miR-150 | beg:1030 | end:1045 | pic:3' GTGACCATGTTCCC-AACCCTCT 5'& || |||||||. &5' -----------GGAATTGGGAGG 3' |