DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Bcar1; Cas; Crkas ATTTA 1-2622 2781-2785;3005-3009 Bcar1; Cas; Crkas WTATTTATW 1-2622 2779-2787 Bcar1; Cas; Crkas WWATTTAWW 1-2622 2779-2787

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000137 mmu-miR-126-5p 12927 Bcar1 gcgCAUGGUUUUCAUUAUUac || |:| | |||||| auaGU-CUACAUUUAAUAAaa 3 19 374 393 [mm9:8:114234389-114234408:-] 0.6547 128 0 -2.20 -0.8905 MIMAT0004534 mmu-miR-145* 12927 Bcar1 guucuugucauaaaGGUCCUUa ||||||| agccugugggugggCCAGGAAa 2 9 343 364 [mm9:8:114244217-114244238:-] 0.5007 140 7 -15.79 -0.1634 MIMAT0000161 mmu-miR-151-3p 12927 Bcar1 ggaguucCUCGGAGUCAGAUc || : :|||||| aucauuuGACUAAUAGUCUAc 2 15 362 382 [mm9:8:114234400-114234420:-] 0.6547 126 6 -9.27 -0.4564 MIMAT0004540 mmu-miR-186* 12927 Bcar1 ggGUUUUUUAAGUGGAA-UCCCg | ||::| :::||| |||| ucCUAAGGAGCUGUCUUGAGGGu 2 21 459 481 [mm9:8:114244100-114244122:-] 0.5000 120 0 -20.55 -0.1418 MIMAT0004541 mmu-miR-188-3p 12927 Bcar1 acguUUGGGACGUACACCCUc || | | |||||||| uaucAAGGCAGGAUGUGGGAu 2 18 164 184 [mm9:8:114234598-114234618:-] 0.5508 153 7 -20.62 -0.2599 MIMAT0000230 mmu-miR-199a-3p 12927 Bcar1 auUGGUUACACGUCUGA--UGACa :|||| ||| | ||| |||| ggGCCAAGGUGAAAACUUAACUGa 2 21 763 786 [mm9:8:114243795-114243818:-] 0.5054 120 0 -16.26 -0.4842 MIMAT0000240 mmu-miR-207 12927 Bcar1 cuCCCUCCUCUCGGUCCUCUUCg |||| | |: ||||||| guGGGAUGCCUCCUCGGAGAAGc 2 22 178 200 [mm9:8:114234582-114234604:-] 0.5508 153 7 -22.19 -0.1102 MIMAT0000367 mmu-miR-291a-5p 12927 Bcar1 ucucucccGGAGGUGA-AACUAc ::|:|||| ||||| agaacuauUUUUCACUAUUGAUu 2 15 333 355 [mm9:8:114234427-114234449:-] 0.6547 122 0 -11.87 -1.1306 MIMAT0004575 mmu-miR-295* 12927 Bcar1 cuucACACGGGGU-GUAAACUca | | :|| | ||||||| uugaUUUUUCCAAUCAUUUGAcu 3 19 350 372 [mm9:8:114234410-114234432:-] 0.6547 133 0 -10.08 -0.1618 MIMAT0000376 mmu-miR-298 12927 Bcar1 cccuucuuguCGGGAGGAGACGg || | ||||||| acagugugguGCACACCUCUGCa 2 14 294 316 [mm9:8:114234466-114234488:-] 0.6547 149 7 -20.20 -0.6944 MIMAT0004617 mmu-miR-148a* 12927 Bcar1 ucagccucacagagUCUUGAaa |||||| aagaaaaacccuaaAGAACUau 3 9 319 340 [mm9:8:114234442-114234463:-] 0.6547 120 0 -5.58 -0.1808 MIMAT0004622 mmu-let-7c-1* 12927 Bcar1 ccuuucGAUCUUCCAACAUGUc | ||:: ||||||| aacuguCCAGGGAUUUGUACAu 2 17 137 158 [mm9:8:114234624-114234645:-] 0.5508 148 7 -11.44 -0.7906 MIMAT0004627 mmu-miR-20a* 12927 Bcar1 gaAAUUCACGAGCAUUACGUca | || | :| |||||| aaUAAAAUUUUAAAAAUGCAa- 3 21 387 407 [mm9:8:114234375-114234395:-] 0.6237 128 0 -4.38 -0.9185 MIMAT0004629 mmu-miR-22* 12927 Bcar1 auuucgaacggugacUUCUUGa |||||| ccaagaaaaacccuaAAGAACu 2 8 317 338 [mm9:8:114234444-114234465:-] 0.6547 120 6 -13.26 -0.1577 MIMAT0004638 mmu-miR-323-5p 12927 Bcar1 cgcuugcgcgguGCCUGGUGGa | ||||||| gauuccuuggauCUGACCACCa 2 11 876 897 [mm9:8:114243684-114243705:-] 0.5054 142 7 -16.91 -0.3295 MIMAT0004638 mmu-miR-323-5p 12927 Bcar1 cgcuugcgcggugccUGGUGGa |||||| gaaaaaagaaaaaaaACCACCc 2 8 1190 1211 [mm9:8:114243370-114243391:-] 0.4998 120 6 -13.50 -0.1250 MIMAT0004640 mmu-miR-325 12927 Bcar1 aacUAUCCUCCACGAGUUAUUu |||| :|:||||| cuaAUAGUCUACAUUUAAUAAa 2 20 371 392 [mm9:8:114234390-114234411:-] 0.6547 127 0 -7.44 -0.1844 MIMAT0000578 mmu-miR-337-3p 12927 Bcar1 uccGUAGUAUAUC-CUCGACUu || || | :| ||||||| ugaCAGCACAGGGAGAGCUGAg 2 19 375 396 [mm9:8:114244185-114244206:-] 0.5007 153 7 -18.36 -0.1120 MIMAT0000595 mmu-miR-345-5p 12927 Bcar1 uucgUGACCU----GAUCCCCAGUCg :||||| | |||||||| ---aGCUGGAACCCCCUGGGGUCAGc 2 19 1 23 [mm9:8:114244558-114244580:-] 0.5610 149 7 -28.27 -0.3311 MIMAT0004656 mmu-miR-345-3p 12927 Bcar1 cagagGUCUGGGGA-UCAAG-UCc ||||:|:|| ||||| || gcuggCAGAUCUCUGAGUUCUAGg 2 18 1090 1113 [mm9:8:114243468-114243491:-] 0.4998 132 0 -26.10 -0.1094 MIMAT0000650 mmu-miR-17* 12927 Bcar1 gauGUUCACGGGAG-UGAC--GUCa | :|||||||| |||| ||| ggcCUGGUGCCCUCAACUGUCCAGg 2 20 123 147 [mm9:8:114234635-114234659:-] 0.5508 122 0 -24.78 -0.3503 MIMAT0004664 mmu-miR-214* 12927 Bcar1 cgugucguucACAUCUGUCCGu ||| ||||||| cagggcucccUGU-GACAGGCa 2 13 270 290 [mm9:8:114234492-114234512:-] 0.4923 146 7 -22.93 -0.6981 MIMAT0004667 mmu-miR-199b 12927 Bcar1 auUGGUUACACGUCUGA--UGACa :|||| ||| | ||| |||| ggGCCAAGGUGAAAACUUAACUGa 2 21 763 786 [mm9:8:114243795-114243818:-] 0.5054 120 0 -16.26 -0.4842 MIMAT0003387 mmu-miR-376a* 12927 Bcar1 ugAGU-AUCUUCCUCUUAGAUGg ||| | || | |:||||| aaUCAUUUGACUAAUAGUCUACa 2 21 361 383 [mm9:8:114234399-114234421:-] 0.6547 135 0 -11.03 -0.3223 MIMAT0000745 mmu-miR-380-3p 12927 Bcar1 uucuacaccugguauGAUGUAu |||||| cauuugacuaauaguCUACAUu 2 8 364 385 [mm9:8:114234397-114234418:-] 0.6547 120 6 -10.24 -0.2951 MIMAT0001094 mmu-miR-412 12927 Bcar1 gccgaUCACCUGG-UCCACUu || ||:|| |||||| gccacAGAGGGCCAAGGUGAa 2 16 755 775 [mm9:8:114243806-114243826:-] 0.5054 127 6 -21.84 -0.3176 MIMAT0002104 mmu-miR-463* 12927 Bcar1 uacuACCUGUU-GUUUAA-UCCAu || |||: || ||| |||| agccUGCACAGCCACAUUGAGGUc 2 19 279 302 [mm9:8:114244279-114244302:-] 0.5005 125 0 -8.60 -0.1275 MIMAT0002107 mmu-miR-466a-3p 12927 Bcar1 agaAUACACACGCACAUACAUAu || || | | | ||||||| cucUA-GUAU-CAU-UAUGUAUu 2 21 53 72 [mm9:8:114244509-114244528:-] 0.5135 142 7 -5.36 -0.4578 MIMAT0003120 mmu-miR-483* 12927 Bcar1 uucugcccuccCCUCCUCACu | ||||||| ugaggagcccaGUAGGAGUGu 2 11 201 221 [mm9:8:114234561-114234581:-] 0.5508 142 7 -18.21 -0.1405 MIMAT0003167 mmu-miR-540-3p 12927 Bcar1 gguccuagcuggAGACUGGa ||||||| ugauuccuuggaUCUGACCa 2 9 875 894 [mm9:8:114243687-114243706:-] 0.5054 140 7 -15.83 -0.4254 MIMAT0003189 mmu-miR-291b-5p 12927 Bcar1 ccucucccGGAGGUGA-AACUAg ::|:|||| ||||| agaacuauUUUUCACUAUUGAUu 2 15 333 355 [mm9:8:114234427-114234449:-] 0.6547 122 0 -12.54 -1.1306 MIMAT0004822 mmu-miR-770-5p 12927 Bcar1 gcaCCGGGUCUGU-GCACCACGa ||| : ||| :||||||| acaGGCAAGUACAGUGUGGUGCa 2 20 284 306 [mm9:8:114234476-114234498:-] 0.4923 154 7 -23.42 -0.4231 MIMAT0003891 mmu-miR-770-3p 12927 Bcar1 ggucgaGGUGCAGUC-CGGGUGc |||| ||| |||||| accuggCCACCACAGUGCCCACa 2 17 30 52 [mm9:8:114244529-114244551:-] 0.5135 128 6 -26.67 -0.3298 MIMAT0003735 mmu-miR-672 12927 Bcar1 agUGUGUGUCAUGU--GGU-UGGAGu | ::|||||::: || ||||| gcAAGUACAGUGUGGUGCACACCUCu 2 22 288 313 [mm9:8:114234469-114234494:-] 0.6547 120 0 -20.92 -0.4186 MIMAT0014815 mmu-miR-3099* 12927 Bcar1 guucccGACCUUCCUUCGACc || |:| ||||||| ugccucCUCGGA-GAAGCUGa 2 16 184 203 [mm9:8:114234579-114234598:-] 0.5508 149 7 -13.39 -0.3877 MIMAT0003739 mmu-miR-673-5p 12927 Bcar1 gagGUUCCUGGU-CUCGACA-CUc ||:| | :| |:||||| || acgCAGGUAAUAGGGGCUGUCGAg 2 20 963 986 [mm9:8:114243595-114243618:-] 0.5044 122 0 -21.05 -0.1549 MIMAT0003898 mmu-miR-760 12927 Bcar1 aggggugucUGGGUCUCGGc ::|||||||| ugaugucucGUCCAGAGCCa 2 12 670 689 [mm9:8:114243892-114243911:-] 0.5054 147 7 -21.93 -0.1483 MIMAT0003741 mmu-miR-674* 12927 Bcar1 aacaagacucuacCCUCGACAc |||||||| gcccacuuccuaaGGAGCUGUc 2 10 452 473 [mm9:8:114244108-114244129:-] 0.5003 145 7 -13.93 -0.1705 MIMAT0003449 mmu-miR-488* 12927 Bcar1 aacUCUCACGAUAAUAGACCc :||| | : ||||||| ccaGGAG-GGAGGUAUCUGGa 2 19 84 103 [mm9:8:114244478-114244497:-] 0.4950 144 7 -16.30 -0.1576 MIMAT0003461 mmu-miR-683 12927 Bcar1 cuccugugucgaaUGUCGUCc ||||||| ggugugucugaagACAGCAGc 2 9 1237 1257 [mm9:8:114243324-114243344:-] 0.4998 140 7 -13.62 -0.2765 MIMAT0003474 mmu-miR-694 12927 Bcar1 gaaguccguuguAAAAGUc |||||| cuaaagaacuauUUUUCAc 2 8 329 347 [mm9:8:114234435-114234453:-] 0.6547 120 6 -4.04 -0.2923 MIMAT0004826 mmu-miR-146b* 12927 Bcar1 uggucuuGA-CUCAG--GGAUCCCg || |:||| ||||||| gaaccccCUGGGGUCAGCCUAGGGa 2 16 6 30 [mm9:8:114244551-114244575:-] 0.5610 149 7 -23.84 -0.4805 MIMAT0003476 mmu-miR-669b 12927 Bcar1 uguacGUGUACGUGUGUUUUga || | | |||||| ugucuCAAAAAAAAACAAAAag 3 18 1169 1190 [mm9:8:114243391-114243412:-] 0.4998 125 0 -5.45 -0.1284 MIMAT0004827 mmu-miR-297b-3p 12927 Bcar1 auaccCAUACACACAUACAUAu |||| | ||||||| cucuaGUAU-CAU-UAUGUAUu 2 18 53 72 [mm9:8:114244509-114244528:-] 0.5135 141 7 -6.98 -0.4512 MIMAT0003481 mmu-miR-695 12927 Bcar1 aagucaguggAUACGGGUUAGa | | :|||||| ucacuauugaUUUUUCCAAUCa 2 13 344 365 [mm9:8:114234417-114234438:-] 0.6547 128 6 -11.58 -0.5865 MIMAT0003487 mmu-miR-697 12927 Bcar1 agagGUGUCCUGGUCCUACAa || ||||||||||||| -gagCAGAGGACCAGGAUGUg 2 18 1 20 [mm9:8:114234762-114234781:-] 0.5286 177 7 -30.07 -0.4041 MIMAT0003487 mmu-miR-697 12927 Bcar1 agagguGUCCUGGUCCUACAa || |: |||||||| uuauauCAAGG-CAGGAUGUg 2 16 161 180 [mm9:8:114234602-114234621:-] 0.5508 149 7 -17.16 -0.1084 MIMAT0003492 mmu-miR-702 12927 Bcar1 cucgccccauuuCCCACCCGu |||||||| cauaaagccuguGGGUGGGCc 2 10 338 358 [mm9:8:114244223-114244243:-] 0.5007 145 7 -19.04 -0.1100 MIMAT0003494 mmu-miR-704 12927 Bcar1 gaUCCUCGUC-UCGUGUAC-AGa :|| ||| |||||||| || guGGGCACAGCAGCACAUGCUCa 2 20 624 646 [mm9:8:114243935-114243957:-] 0.5054 130 0 -22.40 -0.2228 MIMAT0003499 mmu-miR-709 12927 Bcar1 aggaggacggaGACGGAGg ||||||| uacuguacaacCUGCCUCu 2 9 924 942 [mm9:8:114243639-114243657:-] 0.5090 140 7 -19.83 -0.4256 MIMAT0003510 mmu-miR-717 12927 Bcar1 ucucuuccauagAGACAGACUc | ||||||| gcccucuucuggUGUGUCUGAa 2 11 1227 1248 [mm9:8:114243333-114243354:-] 0.4998 142 7 -12.70 -0.2362 MIMAT0003510 mmu-miR-717 12927 Bcar1 ucucUUCCAU-AGAG-AC-AGACUc |||| | |:|| || ||||| agcuAAGGCAGUUUCGUGUUCUGAu 2 19 646 670 [mm9:8:114243911-114243935:-] 0.5054 124 0 -14.02 -0.1082 MIMAT0004842 mmu-miR-879 12927 Bcar1 ccgaaucucgaUAUUCGGAGa | ||||||| ggugggccaggAAAAGCCUCa 2 11 351 371 [mm9:8:114244210-114244230:-] 0.5007 142 7 -14.55 -0.3104 MIMAT0004863 mmu-miR-220 12927 Bcar1 uucacagacUGUGACACCACc ||| ||||||| caggcaaguACAGUGUGGUGc 2 13 285 305 [mm9:8:114234477-114234497:-] 0.4923 152 7 -16.11 -0.1029 MIMAT0004864 mmu-miR-297a* 12927 Bcar1 auaccCAUACACACAUACAUAu |||| | ||||||| cucuaGUAU-CAU-UAUGUAUu 2 18 53 72 [mm9:8:114244509-114244528:-] 0.5135 141 7 -6.98 -0.4512 MIMAT0004866 mmu-miR-297c* 12927 Bcar1 auaccCAUACACACAUACAUAu |||| | ||||||| cucuaGUAU-CAU-UAUGUAUu 2 18 53 72 [mm9:8:114244509-114244528:-] 0.5135 141 7 -6.98 -0.4512 MIMAT0004876 mmu-miR-466b-3p 12927 Bcar1 agaAUACACACGCACAUACAUAu || || | | | ||||||| cucUA-GUAU-CAU-UAUGUAUu 2 21 53 72 [mm9:8:114244509-114244528:-] 0.5135 142 7 -5.36 -0.4578 MIMAT0005453 mmu-miR-466b-3-3p 12927 Bcar1 agaAUACACACGCACAUACAUAa || || | | | ||||||| cucUA-GUAU-CAU-UAUGUAUu 2 21 53 72 [mm9:8:114244509-114244528:-] 0.5135 142 7 -6.09 -0.4578 MIMAT0004878 mmu-miR-466c-3p 12927 Bcar1 agaAUACACACGCACAUACAUAu || || | | | ||||||| cucUA-GUAU-CAU-UAUGUAUu 2 21 53 72 [mm9:8:114244509-114244528:-] 0.5135 142 7 -5.36 -0.4578 MIMAT0004880 mmu-miR-466e-3p 12927 Bcar1 agaAUACACACGCACAUACAUAu || || | | | ||||||| cucUA-GUAU-CAU-UAUGUAUu 2 21 53 72 [mm9:8:114244509-114244528:-] 0.5135 142 7 -5.36 -0.4578 MIMAT0004884 mmu-miR-466h 12927 Bcar1 auGUGUGUUCGUGU------ACGUGUGu || :||||:||| ||||||| gaCAGGCAAGUACAGUGUGGUGCACACc 2 21 283 310 [mm9:8:114234472-114234499:-] 0.4923 155 7 -24.92 -0.1346 MIMAT0004931 mmu-miR-466d-3p 12927 Bcar1 gauaCACACGCACAUACAUAu || | | | ||||||| ucuaGUAU-CAU-UAUGUAUu 2 18 54 72 [mm9:8:114244509-114244527:-] 0.5135 141 7 -6.58 -0.4578 MIMAT0004938 mmu-miR-875-3p 12927 Bcar1 guaucggagUCAU-AAAAGUcc | || |||||| cccuaaagaACUAUUUUUCAcu 3 13 327 348 [mm9:8:114234434-114234455:-] 0.6547 123 0 -4.62 -0.2743 MIMAT0004862 mmu-miR-877* 12927 Bcar1 acccuccuccCUCUUCUCCUGu ||| ||||||| ----------GAGCAGAGGACc 2 13 1 12 [mm9:8:114234770-114234781:-] 0.5571 152 7 -14.48 -0.8263 MIMAT0005293 mmu-miR-467e 12927 Bcar1 uguAUAUGUACGAGUGUGAAUa || |:| |: :|||:||| gacUA-AUA-GUCUACAUUUAa 2 20 369 388 [mm9:8:114234394-114234413:-] 0.6547 131 0 -7.78 -0.1255 MIMAT0005293 mmu-miR-467e 12927 Bcar1 uguauaUGU-ACGAGUGUGA-AUa ||| ||| |||||| || gccaccACAGUGCCCACACUCUAg 2 17 35 58 [mm9:8:114244523-114244546:-] 0.5135 127 0 -13.31 -0.3342 MIMAT0005830 mmu-miR-466l 12927 Bcar1 uuaUACACACGUACAUAAAUAu || ||| || ||||||| gggAUUUGUACA--UAUUUAUa 2 20 146 165 [mm9:8:114234617-114234636:-] 0.5508 156 7 -6.82 -1.0367 MIMAT0005830 mmu-miR-466l 12927 Bcar1 uuauacaCACGUACAUAAAUAu || :| ||||||| agcagcaGUAUACUUAUUUAUa 2 16 1252 1273 [mm9:8:114243308-114243329:-] 0.4999 147 7 -6.28 -1.0560 MIMAT0005847 mmu-miR-1190 12927 Bcar1 cugucUCCCCUU-GGAGUCG-ACu ||| || ||||||| || gggccAGGAAAAGCCUCAGCAUGa 2 18 354 377 [mm9:8:114244204-114244227:-] 0.5007 124 0 -24.00 -0.1864 MIMAT0005848 mmu-miR-466j 12927 Bcar1 aaUGUGUGU-ACGUGUACGUGUGu | ::||| ||:: :||||||| gcAAGUACAGUGUG-GUGCACACc 2 22 288 310 [mm9:8:114234472-114234494:-] 0.6547 154 7 -16.18 -0.3151 MIMAT0005853 mmu-miR-669e 12927 Bcar1 uaCUUGUACGUGU---GUGUUCUGu |: :| |||| :||||||| aaGGUUAGUCACAGGCUACAAGACa 2 21 201 225 [mm9:8:114244356-114244380:-] 0.4982 147 7 -17.35 -0.5089 MIMAT0005854 mmu-miR-467g 12927 Bcar1 uauAUACACACACAUACAUAu || || | ||||||| cucUA-GUAUCAUUAUGUAUu 2 19 53 72 [mm9:8:114244509-114244528:-] 0.5135 144 7 -5.36 -0.4838 MIMAT0005855 mmu-miR-467h 12927 Bcar1 uguAUAUGUACGUGUGUGAAUa || |:| |: :|||:||| gacUA-AUA-GUCUACAUUUAa 2 20 369 388 [mm9:8:114234394-114234413:-] 0.6547 131 0 -7.67 -0.1255 MIMAT0005855 mmu-miR-467h 12927 Bcar1 uguauaUGU-ACGUGUGUGA-AUa ||| ||| |||||| || gccaccACAGUGCCCACACUCUAg 2 17 35 58 [mm9:8:114244523-114244546:-] 0.5135 127 0 -13.12 -0.3342 MIMAT0007869 mmu-miR-1899 12927 Bcar1 ccuucgucuaaGCCGGUAGCGa | |||||||| gaucugaccacCAGCCAUCGCu 2 12 885 906 [mm9:8:114243675-114243696:-] 0.5054 147 7 -17.11 -0.1866 MIMAT0007876 mmu-miR-1907 12927 Bcar1 uggAGGUCU---AGGAGAC-GACGAg |||||| ||| || ||||| ucgUCCAGAGCCACCUAUGUCUGCUg 2 20 677 702 [mm9:8:114243879-114243904:-] 0.5054 126 0 -23.21 -0.1237 MIMAT0007878 mmu-miR-1894-3p 12927 Bcar1 gaGGGAAGUGGGAGAGG-GAACg ||| ||::| :||| |||| uaCCCAGCAUUCAUUCCUCUUGa 2 21 51 73 [mm9:8:114234709-114234731:-] 0.4177 128 0 -24.54 -0.5016 MIMAT0009397 mmu-miR-1933-3p 12927 Bcar1 uaucaguguGACUACCAGGACc | || ||||||| acugcucuuCCGAAGGUCCUGa 2 14 1006 1027 [mm9:8:114243554-114243575:-] 0.4998 149 7 -14.55 -0.8640 MIMAT0009398 mmu-miR-1934 12927 Bcar1 ucuccugcUUCGUCCCCUGGUCu :||||| ||||||| --------GAGCAGAGGACCAGg 2 16 1 15 [mm9:8:114234767-114234781:-] 0.5571 163 7 -24.21 -0.1788 MIMAT0009398 mmu-miR-1934 12927 Bcar1 ucuccugCUUCGUCCCCUGGUCu ||:|| |||||||| ugcaucaGAGGC-UGGGACCAGa 2 17 424 445 [mm9:8:114244136-114244157:-] 0.5007 154 7 -25.59 -0.2360 MIMAT0009413 mmu-miR-1947 12927 Bcar1 guCGUGAGU-CGAUCGAGCAGGa |: || | | |: ||||||| guGUUCUGAUGAUGUCUCGUCCa 2 21 661 683 [mm9:8:114243898-114243920:-] 0.5054 151 7 -17.89 -0.3185 MIMAT0009417 mmu-miR-1950 12927 Bcar1 acuGGUAUAGGAAUCUACGUCu |||| |: || ||||||| ucuCCAU-UUAUUUGAUGCAGg 2 20 110 130 [mm9:8:114244451-114244471:-] 0.4765 161 7 -19.47 -0.2117 MIMAT0009426 mmu-miR-1955 12927 Bcar1 uuuucGACGUCACGUAGGA-CCCUGa ||| :|| || ||| ||||| accccCUGGGGU-CAGCCUAGGGACc 2 21 8 32 [mm9:8:114244549-114244573:-] 0.5610 130 0 -22.80 -0.1271 MIMAT0009428 mmu-miR-1956 12927 Bcar1 aggcgACUGAGUCGG-GACCUGa | :|| ||:| |||||| agccaUCGCUAAGUCACUGGACc 2 18 897 919 [mm9:8:114243662-114243684:-] 0.5072 125 6 -22.55 -0.2223 MIMAT0009439 mmu-miR-1966 12927 Bcar1 cugagagAGGACUCGGUCGA-GGGAa ||:| ||: :||| |||| gaggaagUCUUCAGUAGGCUGCCCUg 2 19 167 192 [mm9:8:114244389-114244414:-] 0.4796 126 0 -18.35 -0.1827 MIMAT0009446 mmu-miR-1971 12927 Bcar1 agaGUCGGGU-CGGAAAUg ::||:|| ||||||| uggUGGCUCAUGCCUUUAa 2 16 1049 1067 [mm9:8:114243514-114243532:-] 0.4998 154 7 -17.09 -0.3504 MIMAT0009458 mmu-miR-1981 12927 Bcar1 cgGUGCAGAUUCGGGU-CGGAAAUg ||| | :||:|| ||||||| acCACAUGGUGGCUCAUGCCUUUAa 2 23 1043 1067 [mm9:8:114243514-114243538:-] 0.4998 161 7 -24.89 -0.3504 MIMAT0009460 mmu-miR-1982.1 12927 Bcar1 gacACCCUCUUGUAUCCCACUCu | | | | :| ||||||| uauUUGAUGCAGGU-GGGUGAGu 2 21 118 139 [mm9:8:114244442-114244463:-] 0.4765 142 7 -16.72 -0.1601 MIMAT0011216 mmu-miR-2140 12927 Bcar1 ugGUGGUUCUAGACGUGGa ||| | |||||||| ugCAC--ACCUCUGCACCa 2 18 303 319 [mm9:8:114234463-114234479:-] 0.6547 146 7 -19.17 -1.1240 MIMAT0011222 mmu-miR-2146 12927 Bcar1 guGUACCUUGGGAAGAGGUg :|| || :||:|||| acUAUUGA---UUUUUCCAa 2 19 346 362 [mm9:8:114234420-114234436:-] 0.6547 126 0 -8.90 -0.1642 MIMAT0015641 mmu-miR-3470b 12927 Bcar1 ggUCGGACCAGAUGUCUCACu |||||||||||||||||| ccAGCCUGGUCUACAGAGUGa 2 20 1114 1134 [mm9:8:114243447-114243467:-] 0.4998 195 7 -45.92 -0.2563 MIMAT0015644 mmu-miR-1186b 12927 Bcar1 caCCACGUACGGAAAUUAGGGu || ||||||||||||||| guGGCUCAUGCCUUUAAUCCCa 2 21 1051 1072 [mm9:8:114243509-114243530:-] 0.4998 184 7 -34.53 -0.2977 MIMAT0000127 mmu-miR-29b 12927 Bcar1 uuGUGACUAAAGUUUACCA-CGAu | |||| || ||||| ||| auCUCUGAAACCACAUGGUGGCUc 2 22 1034 1057 [mm9:8:114243524-114243547:-] 0.4998 129 0 -14.88 -0.2890 MIMAT0000135 mmu-miR-125a-5p 12927 Bcar1 agUGUCCAAU-UUC---C---CAGAGUCCCu ||||| || ||| | |||||||| ucACAGGCUACAAGACAGUCUCUCUCAGGGc 2 23 209 239 [mm9:8:114244342-114244372:-] 0.4982 151 7 -26.39 -0.2270 MIMAT0000136 mmu-miR-125b-5p 12927 Bcar1 agUGUUCAAUC--CCAGAGUCCCu ||||| || |||||||| cuACAAGACAGUCUCUCUCAGGGc 2 21 216 239 [mm9:8:114244342-114244365:-] 0.4982 155 7 -22.15 -0.2209 MIMAT0000150 mmu-miR-138 12927 Bcar1 gccGGACUAAGUGUUGUGGUCGa |:||: || | ||||||| uucCUUGGAUCUGACCACCAGCc 2 21 878 900 [mm9:8:114243681-114243703:-] 0.5054 160 7 -19.61 -0.1225 MIMAT0000159 mmu-miR-149 12927 Bcar1 cccUCACUUCUGUGCCUC-GGUCu :| |||| :: |||| |||| cucGGAGAAGCUGAGGAGCCCAGu 2 21 190 213 [mm9:8:114234569-114234592:-] 0.5508 128 0 -20.34 -0.1611 MIMAT0000162 mmu-miR-152 12927 Bcar1 ggUUCAAGACAGUA-CGUGACu | | || ||:|| |||||| gcAUGCUCAGUUAUGGCACUGa 2 20 718 739 [mm9:8:114243842-114243863:-] 0.5054 131 6 -18.01 -0.2132 MIMAT0000165 mmu-miR-155 12927 Bcar1 uggggauaguguuaaUCGUAAUu ||||||| gagauggcgggugaaAGCAUUAa 2 9 984 1006 [mm9:8:114243575-114243597:-] 0.4998 140 7 -11.46 -0.2172 MIMAT0000209 mmu-miR-129-5p 12927 Bcar1 cguucgggucuggcGUUUUUc |||||| gucucaaaaaaaaaCAAAAAg 2 8 1170 1190 [mm9:8:114243391-114243411:-] 0.4998 120 6 -8.61 -0.1577 MIMAT0000219 mmu-miR-24 12927 Bcar1 gacaagGACGACUUGACUCGGu :| : | |||||||| gcucagUUAUGGCACUGAGCCu 2 17 722 743 [mm9:8:114243838-114243859:-] 0.5054 148 7 -17.57 -0.2668 MIMAT0000236 mmu-miR-203 12927 Bcar1 gaucaccAGGAUUUGUAAAGUg |:| || ||||| | uugauuuUUCCAAUCAUUUGAc 2 16 350 371 [mm9:8:114234411-114234432:-] 0.6547 123 0 -8.64 -0.1156 MIMAT0000237 mmu-miR-204 12927 Bcar1 ucCGUAUCCUACUG--UUUCCCUu |::|| | | || ||||||| ugGUGUAUG-UCACUUAAAGGGAc 2 21 546 568 [mm9:8:114244013-114244035:-] 0.5000 149 7 -13.75 -0.3946 MIMAT0004576 mmu-miR-296-3p 12927 Bcar1 ccucucggaggugggUUGGGAg |||||| cucugcaccaagaaaAACCCUa 2 8 310 331 [mm9:8:114234451-114234472:-] 0.6547 120 6 -19.07 -0.1765 MIMAT0000379 mmu-miR-301a 12927 Bcar1 cgaaacUGUUAUGAU--AACGUGAc | |: |||| || |||| aacccuAAAGAACUAUUUUUCACUa 2 18 325 349 [mm9:8:114234433-114234457:-] 0.6547 120 0 -7.45 -0.1569 MIMAT0000535 mmu-miR-29a 12927 Bcar1 auuGGCUAAAGUCUACCA-CGAu |:|| || ||||| ||| ucuCUGAAACCACAUGGUGGCUc 2 20 1035 1057 [mm9:8:114243524-114243546:-] 0.4998 123 0 -13.94 -0.2890 MIMAT0000536 mmu-miR-29c 12927 Bcar1 auuGGCUAAAGUUUACCA-CGAu |:|| || ||||| ||| ucuCUGAAACCACAUGGUGGCUc 2 20 1035 1057 [mm9:8:114243524-114243546:-] 0.4998 123 0 -13.94 -0.2890 MIMAT0000555 mmu-miR-324-5p 12927 Bcar1 ugUGGUUACG--GGAUCCCCUACGc |:||| || |: ||||||| auAUCAAGGCAGGAUGUGGGAUGCc 2 22 163 187 [mm9:8:114234595-114234619:-] 0.5508 152 7 -20.40 -0.4894 MIMAT0000559 mmu-miR-326 12927 Bcar1 ugaccucCUUCCCGGGUC-UCc ||:| |||||| || agaagcuGAGGAGCCCAGUAGg 2 15 195 216 [mm9:8:114234566-114234587:-] 0.5508 122 0 -25.63 -0.1077 MIMAT0000565 mmu-miR-328 12927 Bcar1 ugccUUCCCGUCUCUCCCGGUc || | || ||||||||| cuucAAAGCCACAGAGGGCCAa 2 19 748 769 [mm9:8:114243812-114243833:-] 0.5054 166 7 -19.64 -0.2207 MIMAT0000567 mmu-miR-329 12927 Bcar1 uuuuuccaaucGACCCACACAa || ||||||| gacgcccucuuCU-GGUGUGUc 2 12 1224 1244 [mm9:8:114243337-114243357:-] 0.4998 141 7 -12.45 -0.1584 MIMAT0000580 mmu-miR-148b 12927 Bcar1 uguUUCAAGACACUA-CGUGACu | | || || || |||||| ugcAUGCUCAGUUAUGGCACUGa 2 20 717 739 [mm9:8:114243842-114243864:-] 0.5054 127 6 -14.20 -0.2132 MIMAT0004651 mmu-miR-340-5p 12927 Bcar1 uuaGUCAGAGUAACGAAAUAUu |||| | | | |||||| cagCAGUAU-ACUUAUUUAUAg 2 20 1254 1274 [mm9:8:114243307-114243327:-] 0.4999 125 6 -9.43 -0.1239 MIMAT0000609 mmu-miR-351 12927 Bcar1 guCCGAGUUUC---CCGAG-GAGUCCCu |||| ||| | ||| ||||||| caGGCUACAAGACAGUCUCUCUCAGGGc 2 23 212 239 [mm9:8:114244342-114244369:-] 0.4982 160 7 -30.85 -0.2209 MIMAT0000658 mmu-miR-210 12927 Bcar1 agUCGGCGACAGUG-UG-CGUGUc |||| | | ||: || ||||| aaAGCCUCAG-CAUGACAGCACAg 2 21 363 385 [mm9:8:114244196-114244218:-] 0.5007 121 0 -20.36 -0.1469 MIMAT0000667 mmu-miR-33 12927 Bcar1 acGUUACGUUGA---UGUUACGUg :||| ||:| | |||||| uuUAAUAAAAUUUUAAAAAUGCAa 2 20 384 407 [mm9:8:114234375-114234398:-] 0.6237 122 6 -8.66 -1.1524 MIMAT0000668 mmu-miR-211 12927 Bcar1 uccguuuccuacuGUUUCCCUu :||||||| gguguaugucacuUAAAGGGAc 2 10 547 568 [mm9:8:114244013-114244034:-] 0.5000 141 7 -12.01 -0.3977 MIMAT0004684 mmu-miR-362-3p 12927 Bcar1 acuuaGGAACUUGUCCACACAa || | | ||||||| ugacgCCCUCUUCUGGUGUGUc 2 18 1223 1244 [mm9:8:114243337-114243358:-] 0.4998 145 7 -15.46 -0.1674 MIMAT0000743 mmu-miR-379 12927 Bcar1 ggaugcaaggUAUCAGAUGgu ||||||||| cauuugacuaAUAGUCUACau 3 12 364 384 [mm9:8:114234398-114234418:-] 0.6547 135 0 -14.03 -0.5148 MIMAT0004747 mmu-miR-411 12927 Bcar1 gcaugcGAUAUGCCAGAUGau ||| |: |||||| auuugaCUA-AUAGUCUACau 3 16 365 384 [mm9:8:114234398-114234417:-] 0.6547 129 0 -8.99 -0.5009 MIMAT0001095 mmu-miR-370 12927 Bcar1 uggucCAAGGUGGGGUC-GUCCg |||||| ||| |||| agugaGUUCCAGGACAGCCAGGc 2 18 1130 1152 [mm9:8:114243429-114243451:-] 0.4998 125 0 -22.69 -0.2164 MIMAT0001533 mmu-miR-448 12927 Bcar1 uacccUGUAGGAUGUAUACGUu | ||::|| | ||||| uaauaAAAUUUUAAAAAUGCAa 2 18 386 407 [mm9:8:114234375-114234396:-] 0.6237 129 0 -9.21 -0.6603 MIMAT0003130 mmu-miR-486 12927 Bcar1 gaGCCCCGUCGAGUCA-UGUCCu :|| || |:||| ||||| aaUGGAAAAGGUUAGUCACAGGc 2 21 194 216 [mm9:8:114244365-114244387:-] 0.4966 124 0 -19.89 -0.3753 MIMAT0003729 mmu-miR-216b 12927 Bcar1 aguguaaaCGGACGUCU-CUAAa ||||||||| |||| cugagcagGCCUGCAGAGGAUUu 2 15 853 875 [mm9:8:114243706-114243728:-] 0.5054 134 0 -23.95 -0.1344 MIMAT0003453 mmu-miR-497 12927 Bcar1 augUUUGGUGUCACAC-GACGAc :|:|||| | || ||||| ccaGAGCCAC-CUAUGUCUGCUg 2 20 681 702 [mm9:8:114243879-114243900:-] 0.5054 121 0 -21.69 -0.1200 MIMAT0004855 mmu-miR-876-3p 12927 Bcar1 acuuaaugaaacaUUUGGUGau ||||||| gaaaaaagaaaaaAAACCACcc 3 10 1190 1211 [mm9:8:114243370-114243391:-] 0.4998 125 0 -8.44 -0.1023 MIMAT0004896 mmu-miR-590-3p 12927 Bcar1 ugAUCGAAUAUG---UAUUUUAAu |||: || |: |||||||| aaUAGUCUACAUUUAAUAAAAUUu 2 20 373 396 [mm9:8:114234386-114234409:-] 0.6547 154 7 -5.68 -1.3462

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G006950 Bcar1 Mus musculus 12927

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Bcar1 mmu-miR-697 beg:1 end:20 pic:3' AGAGGTGTCCTGGTCCTACAA 5'& || ||||||||||||| &5' ----CAGAGGACCAGGATGT- 3' Bcar1 mmu-miR-582-5p beg:124 end:143 pic:3' TCATTGACCAACTT-GTTGACAT 5'& ||||| ||||||| &5' -----CTGGTGCCCTCAACTGT- 3' Bcar1 mmu-miR-1892 beg:249 end:267 pic:3' TAGGAGGGAGGGCAGGGGTTTA 5'& | . | ||||||| &5' ------CACATGGGCCCCAAA- 3' Bcar1 mmu-miR-151-5p beg:175 end:195 pic:3' TGATCTGACACTC----GAGGAGCT 5'& ||||.| |||||||. &5' -------TGTGGGATGCCTCCTCGG 3' Bcar1 mmu-miR-1935 beg:104 end:121 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& || |||| |||||||| &5' ------CC-CCAG-CTCTGCCT 3' Bcar1 mmu-miR-2140 beg:304 end:319 pic:3' TGGTGGTTCTAGACGTGGA 5'& |||| |||||||| &5' --CACC----TCTGCACC- 3' Bcar1 mmu-miR-3099star beg:190 end:203 pic:3' GTTCCCGACCTTCCTTCGACC 5'& ||| ||||||| &5' --------GGA--GAAGCTG- 3' Bcar1 mcmv-miR-M55-1 beg:225 end:243 pic:3' TGCCGATCGTGCGGCTAGTGGT 5'& ||||.| |||||||| &5' --GGCTGGG-----GATCACCA 3' Bcar1 mmu-miR-770-5p beg:289 end:306 pic:3' GCACCGGGTCTGTGCACCACGA 5'& | ||| .||||||| &5' ----GTACAG---TGTGGTGC- 3' Bcar1 mcmv-miR-m22-1 beg:11 end:31 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& || ||. || .||||| &5' -GGAT---GTGAGGCTGGGGA- 3' Bcar1 mmu-miR-106bstar beg:284 end:301 pic:3' CGTCGTTCATGGGTGTCACGCC 5'& .|||||| ||||||.|| &5' --GGCAAGT----ACAGTGTGG 3' Bcar1 mmu-miR-1186 beg:39 end:63 pic:3' GTACG-GAAATTAA-GGTCGTGAG 5'& |||| || ||||||.|| &5' -ATGCTCTGAGCTACCCAGCATTC 3' Bcar1 mmu-miR-125a-5p beg:254 end:275 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& |..|| ||||||| &5' --ATGGGCCCCAAAC-CTCAGGG- 3' Bcar1 mmu-miR-125b-5p beg:254 end:275 pic:3' AGTGTTCAATCCCA-------GAGTCCCT 5'& ||| ||||||| &5' ----------GGGCCCCAAACCTCAGGG- 3' Bcar1 mmu-miR-144 beg:150 end:167 pic:3' TCATGTAGTAGATATGACAT 5'& ||||| .||.||||. &5' -GTACA-TATTTATAT---- 3' Bcar1 mmu-miR-145star beg:139 end:151 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||||.|| &5' -------------TCCAGGGAT 3' Bcar1 mmu-miR-188-3p beg:164 end:184 pic:3' ACGTTTGGGACGTACACCCTC 5'& |||. | | |||||||| &5' --CAAGGCA-GGATGTGGGA- 3' Bcar1 mmu-miR-188-5p beg:130 end:151 pic:3' GGGAGGTGGTACGTTCCCTAC 5'& ||||| ||..| | |||||| &5' CCCTCAACTGT-CCAGGGAT- 3' Bcar1 mmu-miR-1934 beg:10 end:32 pic:3' TCTCCTG--CTTCGTCCCCTGGTCT 5'& ||||. ||.|| |||||. &5' --AGGATGTGAGGCTGGGGAT---- 3' Bcar1 mmu-miR-1951 beg:297 end:318 pic:3' ATCG-GTGTGGTCAGAGGTGATG 5'& |.|. |||||| ||| ||| &5' TGGTGCACACC--TCTGCAC--- 3' Bcar1 mmu-miR-1953 beg:344 end:362 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& || .|.|||.||| &5' -------CTATTGATTTTTCCA 3' Bcar1 mmu-miR-1956 beg:104 end:126 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& || | .||| |||.|||.| &5' -CC-CCAGCTCTGCCTTGGGC- 3' Bcar1 mmu-miR-199a-3p beg:6 end:30 pic:3' ATTGGT--TACACGTCTGATGACA 5'& .|||| ||||| ||.||. | &5' -GACCAGGATGTG-AGGCTGGGG- 3' Bcar1 mmu-miR-19a beg:137 end:158 pic:3' AGTCAAAACGTA--TCTAAACGTGT 5'& ||. .||||||.||| &5' -------TGTCCAGGGATTTGTACA 3' Bcar1 mmu-miR-19b beg:137 end:158 pic:3' AGTCAAAACGTA--CCTAAACGTGT 5'& ||. |||||||.||| &5' -------TGTCCAGGGATTTGTACA 3' Bcar1 mmu-miR-203star beg:318 end:342 pic:3' ACAACTTGACAG---TTCTTGGTGA 5'& ||| ||||||.|.| &5' ----GAAAAACCCTAAAGAACTATT 3' Bcar1 mmu-miR-2134 beg:301 end:323 pic:3' CGTG-GGGCAAAGGGTTCTG 5'& |||| ||. |||||| &5' GCACACCTCTGCACCAAGA- 3' Bcar1 mmu-miR-2140 beg:46 end:69 pic:3' TGGTGGTTC-TAGACGTGGA 5'& .|.||| || ||. ||| &5' GCTACCCAGCATTCATTCCT 3' Bcar1 mmu-miR-2145 beg:6 end:27 pic:3' TTGGTCC-GGGCTGGGACGA 5'& .|||||| . .|| ||| &5' GACCAGGATGTGAGGCTG-- 3' Bcar1 mmu-miR-214star beg:270 end:291 pic:3' CGTGTCGTTC-ACATCTGTCCGT 5'& .|| ||| |||||||| &5' ----GGCTCCCTGT-GACAGGCA 3' Bcar1 mmu-miR-214star beg:84 end:106 pic:3' CGTGTCGTTCACA--TCTGTCCGT 5'& |||.|| .||||||.| &5' -----GCAGGTTTGGGGACAGGTA 3' Bcar1 mmu-miR-23a beg:3 end:22 pic:3' CCTTTAGGGACCGTTACACTA 5'& .|. || || |||||| &5' --GAGGACCAGG--ATGTGA- 3' Bcar1 mmu-miR-24 beg:38 end:53 pic:3' GACAAGGACGACTTGACTCGGT 5'& |||| ||||||.| &5' -------TGCT---CTGAGCTA 3' Bcar1 mmu-miR-27a beg:269 end:285 pic:3' CGCCTTGAATCGGTGACACTT 5'& |..|| || |||||| &5' ---GGGCT---CC-CTGTGA- 3' Bcar1 mmu-miR-27b beg:267 end:285 pic:3' CGTCTTGAATCGGTGACACTT 5'& |||..|| || |||||| &5' -CAGGGCT---CC-CTGTGA- 3' Bcar1 mmu-miR-28 beg:66 end:87 pic:3' GAGTTATCTGACA-CTCGAGGAA 5'& ||| || |||||||| &5' CTCTT--GAAAACGGAGCTCCT- 3' Bcar1 mmu-miR-296-3p beg:94 end:117 pic:3' CCTCT---CGGAGGTGGGTTGGGAG 5'& ||.|| |. | ||||.|.|| &5' GGGGACAGGTAA-C-CCCAGCTCT- 3' Bcar1 mmu-miR-3099star beg:3 end:28 pic:3' GTTCCCGA-CCTTC-CTTCGACC 5'& .||| | ||| | ||.||||| &5' -GAGGACCAGGATGTGAGGCTGG 3' Bcar1 mmu-miR-324-5p beg:164 end:187 pic:3' TGTGGTTACGGGAT-C-CCCTACGC 5'& |.||| || | ||||||| &5' --ATCAAGGCAGGATGTGGGATGC- 3' Bcar1 mmu-miR-376b beg:269 end:285 pic:3' TTCACCTACAAGGAGATACTA 5'& ||. ||| ||.||| &5' ----GGGC--TCC-CTGTGA- 3' Bcar1 mmu-miR-450a-3p beg:310 end:333 pic:3' TACTTACGT--TTCGTA--GGGGTTA 5'& |||| ||| |||.|| &5' -----TGCACCAAGAAAAACCCTAA- 3' Bcar1 mmu-miR-450a-3p beg:245 end:266 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ..|||| |||||| &5' ---GGTGCACATGGGCCCCAA- 3' Bcar1 mmu-miR-467e beg:141 end:165 pic:3' TGTATATGTACGAGTGTGAATA 5'& || |. ||. ||.|.|||| &5' -CAGGGATTTGTACATATTTAT 3' Bcar1 mmu-miR-470 beg:126 end:150 pic:3' TGAGTGGTCACGGT------CAGGTTCTT 5'& .||||| |||||.|.| &5' -------GGTGCCCTCAACTGTCCAGGGA 3' Bcar1 mmu-miR-497 beg:281 end:306 pic:3' ATGTTTG---GTGTCACACGACGAC 5'& |||..| .|||||||| ||| &5' -ACAGGCAAGTACAGTGTGGTGC-- 3' Bcar1 mmu-miR-503star beg:23 end:46 pic:3' GGTCCGTCACCT-TTGTTATGAG 5'& | || | |||. |.|.||.||| &5' CTGGGGA-TGGGCAGCGATGCTC 3' Bcar1 mmu-miR-672 beg:250 end:271 pic:3' AGTGTGTGTCATGTGG-TTGGAGT 5'& .||||..| | || ||||||| &5' --GCACATGGGCC-CCAAACCTCA 3' Bcar1 mmu-miR-673-5p beg:265 end:285 pic:3' GAGGT-TCCTGGTCTCGACACTC 5'& || |||.|. |||||| &5' --CCTCAGGGCTCC--CTGTGA- 3' Bcar1 mmu-miR-681 beg:6 end:27 pic:3' TCGAC-GGACGGTCGCTCCGAC 5'& | || |.||||||| &5' ----GACCAGGATGTGAGGCTG 3' Bcar1 mmu-miR-687 beg:0 end:19 pic:3' AGTAACGACGTAA---GGTCCTATC 5'& ||| |||||||. &5' --------GCAGAGGACCAGGATG- 3' Bcar1 mmu-miR-708 beg:66 end:87 pic:3' GGGTCGATCTAACA-TTCGAGGAA 5'& || || .||||||| &5' -----CTTGAAAACGGAGCTCCT- 3' Bcar1 mmu-miR-709 beg:104 end:122 pic:3' AGGAGGACGGAGACGGAGG 5'& || || | ||||||||. &5' -CC-CCAG-CTCTGCCTT- 3' Bcar1 mmu-miR-743b-5p beg:29 end:51 pic:3' ACTACCTGTGGTC---AGACTTGT 5'& ||||.|| |. |||||.| &5' --ATGGGCAGCGATGCTCTGAGC- 3' Bcar1 mmu-miR-744 beg:99 end:119 pic:3' ACGACAATCGGGATCGGGGCGT 5'& | || ||| |||.|.|| &5' ----GGTAACCCCAGCTCTGC- 3' Bcar1 mmu-miR-760 beg:257 end:277 pic:3' AGGGGTGTCTGG-GTCTCGGC 5'& ||||| ||| |||.||. &5' -CCCCAA--ACCTCAGGGCT- 3' Bcar1 mmu-miR-767 beg:285 end:307 pic:3' ACGAGTCTGTTGG-----TACCACGT 5'& ||.||| . .||||||| &5' -----AGGCAAGTACAGTGTGGTGCA 3' Bcar1 mmu-miR-767 beg:238 end:254 pic:3' ACGAGTCTGTTGGTACCACGT 5'& |||. ||||||| &5' ----CAGGAT----TGGTGCA 3' Bcar1 mmu-miR-7a beg:332 end:362 pic:3' TGTTGTTTT--AGTGATC----AGAAGGT 5'& ||| |||||| |.||||| &5' --AACTATTTTTCACTATTGATTTTTCCA 3' Bcar1 mmu-miR-220 beg:289 end:305 pic:3' TTCACAGAC-TGTGACACCACC 5'& | ||| ||||||| &5' --------GTACAGTGTGGTG- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Bcar1 RAID00069333 mmu-miR-6363 miRNA MIMAT0025107 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID00196823 mmu-miR-328-3p miRNA MIMAT0000565 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID00442952 mmu-miR-6908-5p miRNA MIMAT0027716 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID00521910 mmu-miR-155-5p miRNA MIMAT0000165 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID00576089 mmu-miR-590-3p miRNA MIMAT0004896 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID00592476 mmu-miR-216b-5p miRNA MIMAT0003729 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID00772214 mmu-miR-370-3p miRNA MIMAT0001095 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID00863112 mmu-miR-324-5p miRNA MIMAT0000555 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID00868032 mmu-miR-876-3p miRNA MIMAT0004855 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID00988588 mmu-miR-138-5p miRNA MIMAT0000150 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01003642 mmu-miR-211-5p miRNA MIMAT0000668 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01075879 mmu-miR-214-5p miRNA MIMAT0004664 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01175215 mmu-miR-125b-5p miRNA MIMAT0000136 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01179724 mmu-miR-7688-5p miRNA MIMAT0029906 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01291864 mmu-miR-466l-3p miRNA MIMAT0005830 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01332301 mmu-miR-7016-3p miRNA MIMAT0027937 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01352104 mmu-miR-551b-5p miRNA MIMAT0017236 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01352793 mmu-miR-148b-3p miRNA MIMAT0000580 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01366088 mmu-miR-301a-3p miRNA MIMAT0000379 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01396111 mmu-miR-29a-3p miRNA MIMAT0000535 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01590543 mmu-miR-149-5p miRNA MIMAT0000159 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01780565 mmu-miR-24-3p miRNA MIMAT0000219 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01862756 mmu-miR-33-5p miRNA MIMAT0000667 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID01887187 mmu-miR-152-3p miRNA MIMAT0000162 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02276012 mmu-miR-486a-5p miRNA MIMAT0003130 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02290318 mmu-miR-379-5p miRNA MIMAT0000743 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02320057 mmu-miR-326-3p miRNA MIMAT0000559 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02525800 mmu-miR-298-5p miRNA MIMAT0000376 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02551370 mmu-miR-296-3p miRNA MIMAT0004576 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02565070 mmu-miR-29b-3p miRNA MIMAT0000127 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02643995 mmu-miR-340-5p miRNA MIMAT0004651 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02649645 mmu-miR-204-5p miRNA MIMAT0000237 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02655496 mmu-miR-7669-3p miRNA MIMAT0029845 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02809362 mmu-miR-362-3p miRNA MIMAT0004684 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02820455 mmu-miR-448-3p miRNA MIMAT0001533 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID02908181 mmu-miR-210-3p miRNA MIMAT0000658 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03202589 mmu-miR-29c-3p miRNA MIMAT0000536 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03238614 mmu-miR-7668-3p miRNA MIMAT0029843 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03356230 mmu-miR-129-5p miRNA MIMAT0000209 Bcar1 mRNA 12927 Prediction 0.2202 Bcar1 RAID03412408 mmu-miR-6947-3p miRNA MIMAT0027795 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03433588 mmu-miR-411-5p miRNA MIMAT0004747 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03453031 mmu-miR-125a-5p miRNA MIMAT0000135 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03486327 mmu-miR-203-3p miRNA MIMAT0000236 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03544922 mmu-miR-770-5p miRNA MIMAT0004822 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03687852 mmu-miR-329-3p miRNA MIMAT0000567 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03704984 mmu-miR-351-5p miRNA MIMAT0000609 Bcar1 mRNA 12927 Prediction 0.1828 Bcar1 RAID03773634 mmu-miR-497a-5p miRNA MIMAT0003453 Bcar1 mRNA 12927 Prediction 0.1828