Scap
DNA & RNA Element - circBase
circRNA IDChromStartEndStrand
mmu_circ_0001846chr9110255449110265027+
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004523mmu-miR-29b*235623ScapauUUGGUGGUAUACUUUGGUcg |||: :: || |||||| uaAACUUUUUUAAAAAACCAca321124145[mm9:9:110287429-110287450:+]0.49371360-9.46-0.7328
MIMAT0000137mmu-miR-126-5p235623ScapgcgcAUGGUUUUCAUUAUUAc | |::| |||||||| ugucUCCUGACUGUAAUAAUa218105125[mm9:9:110287410-110287430:+]0.47671537-8.57-0.7728
MIMAT0004547mmu-miR-203*235623ScapacaACUUGACAG---UUCUUGGUGa | |||| |: || |||||| uaaUAAACUUUUUUAAAAAACCACa220121145[mm9:9:110287426-110287450:+]0.49371266-8.63-0.7989
MIMAT0004625mmu-miR-16*235623ScapagUCGUCGUGUCAGUUAU-GACc || | :| || ||||| ||| cuAG-ACUAGAGGCAAUAGCUGa2217293[mm9:9:110287377-110287398:+]0.47671220-11.32-0.5442
MIMAT0004790mmu-miR-503*235623ScapgguccgUCACCUUUGUUAU-GAg | | ||::||||| || accuagACUAGAGGCAAUAGCUg2177092[mm9:9:110287375-110287397:+]0.47671200-11.95-0.2435
MIMAT0003728mmu-miR-374*235623ScapgagCCUGUUACUAUUAU-GUUGg ||:|| |: :||| |||| gugGGGCACAGGGGAUAGCAACu2204163[mm9:9:110287346-110287368:+]0.47671230-14.47-0.2275
MIMAT0004839mmu-miR-743b-5p235623ScapacuaccuguggUCAGACUUGu | ||||||| ggcaauagcugACUCUGAACu21182102[mm9:9:110287387-110287407:+]0.47671427-12.77-0.2815
MIMAT0009424mmu-miR-1953235623ScapgucuucggacucuuGAAAGGGu ||||||| aaguacgcuauuccCUUUCCCc291031[mm9:9:110287315-110287336:+]0.62731407-12.54-0.7634
MIMAT0000151mmu-miR-140235623ScapgaugguaucccaUUUUGGUGac |||||||| aaacuuuuuuaaAAAACCACa-311125145[mm9:9:110287430-110287450:+]0.49371300-10.39-0.4846
MIMAT0000517mmu-miR-192235623ScapccgacaguuaaguaUCCAGUc |||||| ----------aggcAGGUCAa28111[mm9:9:110287306-110287316:+]0.77801206-9.10-0.1335
MIMAT0000904mmu-miR-215235623ScapcagacaguuuaguaUCCAGUa |||||| ----------aggcAGGUCAa28111[mm9:9:110287306-110287316:+]0.77801206-7.72-0.1335
MIMAT0004855mmu-miR-876-3p235623ScapacUUAAUGAAACAUUUGGUGau | || :|| ||||||| aaACUUUUUUAAAAAACCACa-321125145[mm9:9:110287430-110287450:+]0.49371360-9.56-0.4711
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G055980ScapMus musculus235623
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Scapmmu-miR-139-3pbeg:91end:112pic:3' GAGGTTGTCCCGGC-GCAGAGGT 5'& ||| | |.| .|||||| &5' CTCTGAA----CTGTTGTCTCC- 3'
Scapmmu-miR-1929beg:59end:77pic:3' GAGACGAGATATTTCAGGATCTT 5'& |||| .| |||||| &5' -----CTCTTT--GGACCTAGA- 3'
Scapmmu-miR-2134beg:25end:42pic:3' CGTGGGGCAAAGGGTTCTG 5'& |||| |||||||. &5' ---CCCCCA-TCCCAAGG- 3'
Scapmmu-miR-469beg:65end:86pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& |||| |. ||| | ||||||| &5' GGAC-CT-AGA-CT-----AGAGGCA 3'
Scapmmu-miR-686beg:67end:88pic:3' AGAAGTGGCAGACC-CTTCGTTA 5'& ||| ||.||||| &5' -----ACCTAGACTAGAGGCAAT 3'
Scapmmu-miR-743b-5pbeg:86end:102pic:3' ACTACCTGTGGTC-AGACTTGT 5'& .|. ||||||| &5' --------GCTGACTCTGAAC- 3'
Scapmmu-miR-744starbeg:75end:90pic:3' TCCAACTCCAATCACCGTTGTC 5'& ||| |||||.|| &5' ----------TAGAGGCAATAG 3'
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
Scap; Kiaa0199mmu-miR-101b86106GAAGUCGAU--AGUGUCAUGACAU :||||: || | |||||--AUAGCUGACUCUGA--ACUGUU
Scap; Kiaa0199mmu-miR-10a3655GUGUUUAAGCCUAGAUGUCCCAU ||| | ||: | ||||||-CCAAGGUGGGG-C-ACAGGGG-
Scap; Kiaa0199mmu-miR-125a3856GUGUCCAAUUUCCCAGAGUCCCU- |||| :||| | |||||:--AAGGU---GGGG-CACAGGGGA
Scap; Kiaa0199mmu-miR-125b3356-AGUGUUCAAUCCCAGAGUCCCU- || |||| |:||| | |||||:AUCCCAAGGUGGGG-CACAGGGGA
Scap; Kiaa0199mmu-miR-13291120GCUGGUAC----CGACAU----CUGACAAU |||: || |:||| ||||||UGACUCUGAACUGUUGUCUCCUGACUGUA-
Scap; Kiaa0199mmu-miR-18597113-CUUGACGGAAAGAGAGGU ||||||:: |||||UGAACUGUUG---UCUCCU
Scap; Kiaa0199mmu-miR-1882158UGGG--AGGUGGUA-----------CGU--UCCCUAC ||| ||| |||| ||| :|||||UCCCUUUCCCCCAUCCCAAGGUGGGGCACAGGGGAUA
Scap; Kiaa0199mmu-miR-2073861CUCCCUCC-UCUCG-GUCCUCU-UCG- ||| :|:|| ||||:|| |||----AAGGUGGGGCACAGGGGAUAGCA
Scap; Kiaa0199mmu-miR-2114372-UCCGU--UUCCUACUGUUUC----CCUU :|||| ::|||| :||| |||GGGGCACAGGGGAUAGCAACUCUUUGGAC
Scap; Kiaa0199mmu-miR-214100120-GACGGACAGACACGGAC-GACA- ||| :||||| |||| ||||ACUG-UUGUCU---CCUGACUGUA
Scap; Kiaa0199mmu-miR-256589-AGUCUGGCUCUG--UUCACGUUAC |::|||| |||| :|| |||||UUUGGACCUAGACUAGAG-GCAAUA
Scap; Kiaa0199mmu-miR-291a-3p4269-CCGUGUGUUUCACCUUCGU---GAAA- || :||||::| |||| ||||UGGGGCACAGGGGAU-AGCAACUCUUUG
Scap; Kiaa0199mmu-miR-2963856UGUCCUAACUCCC---CCCCGGGA ||| ||:|| ||||-AAGG--UGGGGCACAGGGGA---
Scap; Kiaa0199mmu-miR-30a-3p88119-CGACG----UUUGU------AGG-CUGACUUUC |||| :||| ||| |||||AGCUGACUCUGAACUGUUGUCUCCUGACUGU---
Scap; Kiaa0199mmu-miR-30e*100119-GACAUUUGUAGG-CUGACUUUC |||| | ||| |||||ACUGUUGUC-UCCUGACUGU---
Scap; Kiaa0199mmu-miR-324-5p3561GUGGUUA-----CGGGAUCCCCUA-CGC |||| || ||||||| ||-CCCAAGGUGGGGCAC-AGGGGAUAGCA
Scap; Kiaa0199mmu-miR-3263856UGACCUCCUUCCCGGGUCUCC- ||| :|||| |||:||----AAGGUGGGGCACAGGGGA
Scap; Kiaa0199mmu-miR-3313856AAGAUCCUAUCCGGGUCCCCG ||| :||| ||||||---AAGGUGGGGCACAGGGGA
Scap; Kiaa0199mmu-miR-3393356ACUCGAGG-----ACCUCCUGUCCCU- ||| |||:| ||||||:----AUCCCAAGGUGGGGCACAGGGGA
Scap; Kiaa0199mmu-miR-3454362CGUGACCUGA-UCCCCAGUCGU- ||:| ||||| :||||----GGGGCACAGGGGAUAGCAA
Scap; Kiaa0199mmu-miR-3513856GUCCGAGUUUCCCGAGGAGUCCCU- |||: :|||| |||||:AAGGU----GGGGCA---CAGGGGA
Scap; Kiaa0199mmu-miR-425126-CCG-CCU----GUGCUGUAAGGGCUA ||| || :||| :||||||AGGCAGGUCAAGUACGCUAUUCCCU--
Scap; Kiaa0199mmu-miR-4694387-CCUGUGG-UUCU-------AGUUACUU--------UCUCCGU ||:||| ::|| || ||:| |||||||GGGGCACAGGGGAUAGCAACUCUUUGGACCUAGACUAGAGGCAA
Scap; Kiaa0199mmu-miR-4864157GAGCCCCGUCGAGUCAUGUCCU- :|||||| ||| :|||-GUGGGGCA---CAG---GGGAU
Scap; Kiaa0199mmu-miR-5012458-AAAGUGGG----------UCCC-UGUUUCCUAA |||| ||| :||| |||::||||CUUUCCCCCAUCCCAAGGUGGGGCACAGGGGAUA
Scap; Kiaa0199mmu-miR-5326687UGCCAGGAUGUGAGUUCCGUAC :|| |||| ||| :|||||UUGGACCUAGACUAGAGGCAA-
Scap; Kiaa0199mmu-miR-5405175GGUCCUAGCUG-GAGA---CUGGA- :|||| |||| |||||-GGGGAUAGCAACUCUUUGGACCUA
Scap; Kiaa0199mmu-miR-675-5p1535-UGACACCCGGGAAAGGCGUGGU- :|| |||||||| | |||CGCUAUU--CCCUUUCC-C-CCAU
Scap; Kiaa0199mmu-miR-6782858-GGAGGUCAGGAA-------CGUGG-CUCUG- || ||| ||| |||| |:||:CCC-CCA-UCCCAAGGUGGGGCACAGGGGAUA
Scap; Kiaa0199mmu-miR-68291121GUCUGAAG--UGACA--------CUGACGUC |||| ||||| |||||:|-UGACUCUGAACUGUUGUCUCCUGACUGUAA
Scap; Kiaa0199mmu-miR-6834262CUCCUGUGUCGAAUGUCGUCC :||:||||| |:||||UGGGGCACAGGGGAUAGCAA-
Scap; Kiaa0199mmu-miR-6864663AGAAGUGGCAGACCCU-UCGUUA ||| |||| |||||---GCACAG---GGGAUAGCAAC
Scap; Kiaa0199mmu-miR-6893258CCUGGGG---CGGCUCG---CCCCUGC |:||| |: |:|| |||||:-CAUCCCAAGGUGGGGCACAGGGGAUA
Scap; Kiaa0199mmu-miR-6962951-GGGUG----UCGUUCGUGUGCG ||||: || :| :|||CCCCAUCCCAAGGUGGGGCACA-
Scap; Kiaa0199mmu-miR-7023962CUCGCCCCAUUUCCCACC-CGU- :|:|||| |||| |||AGGUGGGGCACAGGGGAUAGCAA
Scap; Kiaa0199mmu-miR-7051537ACGGGU-GGGGU-GGAGGGUGG- ||: |||: || ||||:|CGCUAUUCCCUUUCC-CCCAUCC
Scap; Kiaa0199mmu-miR-70993113AGGAGGACGGA-GACGGAGG- |||: || :||:||||-ACUCUGAACUGUUGUCUCCU
Scap; Kiaa0199mmu-miR-7105880GAGUUGAGAGG---GGUUCUGAACC |||||||: || |||||-GCAACUCUUUGGACCUAGACUA--
Scap; Kiaa0199mmu-miR-7153856GUGCGCCCCCACACGUG-CCUC- | |:||| |||| ||:|AAGGUGGG-----GCACAGGGGA
Scap; Kiaa0199mmu-miR-761101120ACACAGUCAAAGUGGGAC-GACG- |||: || :|||| |||:-CUGUUG---UC-UCCUGACUGUA
Scap; Kiaa0199mmu-miR-7621539-CGAGACAGGGCC--GGGGUCGGGG- ||| |||| ||||| :|||CGCUAU-UCCCUUUCCCCCA-UCCCA
Scap; Kiaa0199mmu-miR-764-3p85114-UGUCAAC-GG----UGAUACCGGAGGA- |:|| || |: |||:| |:|||||AAUAGCUGACUCUGAACUGUUGUCUCCUG
Scap; Kiaa0199mmu-miR-770-3p3054-GGUCGAGGUG-CAGUCCGGGUGC- ||| | ||| || :||| || |CCCAUC-CCAAGGUGGGGCACAGGG
Scap; Kiaa0199mmu-miR-8043366-AGG--UCCACUCC----------UUGUUGAGUGU ||| |||||:|| |:||||||AUCCCAAGGUGGGGCACAGGGGAUAGCAACUCU--
Scap; Kiaa0199mmu-miR-101b84105gaagUCGAUAGUGUCAUGACAu ||||: | | | |||||caatAGCTGACTCTGAACTGTt
Scap; Kiaa0199mmu-miR-10a3555GUGUUUAAGCCUAGAUGUCCCau| |||: | ||: | ||||||CCCAAGGT-GGGGC-ACAGGGga
Scap; Kiaa0199mmu-miR-125a3754GUGUCCAAUUUCCCAGAGUCCCu|| |||| ||| | |||||CA-AGGT----GGGGCACAGGGg
Scap; Kiaa0199mmu-miR-125b3454AGUGUUCAAUCCCAGAGUCCCu|| |||| |:||| | |||||TCCCAAGGTGGGG-CACAGGGg
Scap; Kiaa0199mmu-miR-13291120gCUGGUAC----CGACA----UCUGACAau |||: || |:||| ||||||tGACTCTGAACTGTTGTCTCCTGACTGTaa
Scap; Kiaa0199mmu-miR-18598112CUUGACGGAAAGAGAGGu|||||| || |||||GAACTG---TTGTCTCCt
Scap; Kiaa0199mmu-miR-1882757uGGGAGGU--GGU---AC-----GUUCCCUAc ||| ||| ||| || ||:|||||tCCC-CCATCCCAAGGTGGGGCACAGGGGATa
Scap; Kiaa0199mmu-miR-2073459cucccUCC-UCUCG-GUCCUCU-UCG ||| :|:|| ||||:|| |||tcccaAGGTGGGGCACAGGGGATAGC
Scap; Kiaa0199mmu-miR-2113455uccGUUUCCUACUGUUUCCCUU |||:| : |:|| ||||:|tccCAAGGTGGGGCACAGGGGA
Scap; Kiaa0199mmu-miR-21496118GAC-GGACAGACA-CGGAC-GACA||| |||| ||| |||| ||||CTGAACTGT-TGTCTCCTGACTGT
Scap; Kiaa0199mmu-miR-256688AGUCUGGCUCUG--UUCACGUUAc|::|||| |||| :|| |||||TTGGACCTAGACTAGAG-GCAATa
Scap; Kiaa0199mmu-miR-291a-3p4367CCGUGUGUUUCACCU-UCGU---GAAA|| :||| || ||| |||| ||||GGGGCAC--AGGGGATAGCAACTCTTT
Scap; Kiaa0199mmu-miR-2963050uguccuaacUCCCCCCCGGGa ||| ||||| |cccatcccaAGGTGGGGCACa
Scap; Kiaa0199mmu-miR-30a-3p100121cGACGUUUGUAGGCUGACUUUc |||: : | |:||||| ||aCTGTTGTCTCCTGACTGTAAt
Scap; Kiaa0199mmu-miR-30e*101121GACAUUUGUAGGCUGACUUUc|||| : | |:||||| ||CTGTTGTCTCCTGACTGTAAt
Scap; Kiaa0199mmu-miR-324-5p3460guGGUUACG----GGAUCCCCUA-CGc |||| |: | ||||||| ||tcCCAAGGTGGGGCACAGGGGATAGCa
Scap; Kiaa0199mmu-miR-3263454ugaccUCCUUCCCGGGUCUCC ||| :|||| |||:||tcccaAGGTGGGGCACAGGGG
Scap; Kiaa0199mmu-miR-3313555aaGAUCCUAUCCGGGUCCCCg | ||| :||| ||||||ccCAAGGTGGGGCACAGGGGa
Scap; Kiaa0199mmu-miR-3393454acucgaggACCUCCUGUCCCu |||:| ||||||tcccaaggTGGGGCACAGGGg
Scap; Kiaa0199mmu-miR-3453960cgugaCCUG-AUCCCCAGUCGU ||:| ||||| :||||aggtgGGGCACAGGGGATAGCA
Scap; Kiaa0199mmu-miR-3513154guccGAGUUUCCCGAGGAGUCCCu | |||:| | | |||||ccatCCCAAGGTGGGGCACAGGGg
Scap; Kiaa0199mmu-miR-425227CCG-CCUG----UGCUGUAAGGGcua||| || | ||| :||||||GGCAGGTCAAGTACGCTATTCCCttt
Scap; Kiaa0199mmu-miR-455-5p6888gCUACAUCAGGUUUCCGUGUAU || ||| |:|:||||| |||gGACCTAGACTAGAGGCA-ATA
Scap; Kiaa0199mmu-miR-4695385CCUGUGGUU-------CUAGUUACU-UUCUCCGU|||:| ||| || | | || |||||||GGATAGCAACTCTTTGGACCTA-GACTAGAGGCA
Scap; Kiaa0199mmu-miR-4863553GAGCCCCGUCGAGUCAUGUCCu| | ||::| :| |||||CCCAAGGTGG---GGCACAGGg
Scap; Kiaa0199mmu-miR-5012557AAAGUGGGU----------CCC-UGUUUCCUAa|||| |||| ||| |||::||||TTTCCCCCATCCCAAGGTGGGGCACAGGGGATa
Scap; Kiaa0199mmu-miR-5326687ugCCAGGAUGUGAGUUCCGUac || |||| ||| :|||||ttGGACCTAGACTAGAGGCAat
Scap; Kiaa0199mmu-miR-5405073gguCCUAGC-UGGAGA---CUGGA |||| | | |||| |||||aggGGATAGCAACTCTTTGGACCT
Scap; Kiaa0199mmu-miR-675-5p1436ugacacccGGGAAA-GGCGUGGu |||||| || ||:|acgctattCCCTTTCCCCCATCc
Scap; Kiaa0199mmu-miR-6785677ggaGGUCAGGAACGUGGCUCUG | | ||:||| ||| ||||tagCAACTCTTTGGACCTAGAC
Scap; Kiaa0199mmu-miR-68290120GUCUGAAG--UGAC--------ACUGACGUc| |||| : |||| ||||||:|CTGACTCTGAACTGTTGTCTCCTGACTGTAa
Scap; Kiaa0199mmu-miR-6834262cuCCUGUGUCGAAUGUCGUcc ||:||||| |:||||tgGGGCACAGGGGATAGCAac
Scap; Kiaa0199mmu-miR-6864362agaaGUGGCAGACCCU-UCGUUa ||| | |||| |||||ggggCACAG---GGGATAGCAAc
Scap; Kiaa0199mmu-miR-6892650ccuGGGG--CGGCU-CGCCCC-UGc |||| || | |:|||| ||ttcCCCCATCCCAAGGTGGGGCACa
Scap; Kiaa0199mmu-miR-6963553GGGUGUCG-UUCGUGUGCg|||| :|: ::||||| |CCCAAGGTGGGGCACAGGg
Scap; Kiaa0199mmu-miR-7022747cucgccccauuUCCCACCCgu | ||||||tcccccatcccAAGGTGGGgc
Scap; Kiaa0199mmu-miR-7052040ACGGGUGGGGUGG-AGGGUgg| ||| ::|| || |||||TTCCCTTTCCCCCATCCCAag
Scap; Kiaa0199mmu-miR-70992111agGAGGAC--GGAGACGGAGG || ||| |: :||:||||gaCT-CTGAACTGTTGTCTCC
Scap; Kiaa0199mmu-miR-7105781gaGUUGAGAGG---GGUUCUGAACc |||||||:: || ||||| |agCAACTCTTTGGACCTAGACTAGa
Scap; Kiaa0199mmu-miR-7153254GUGCGCCCCCA-CACGUG-CCUC||: | ||| | |||| ||:|CATCCCAAGGTGGGGCACAGGGG
Scap; Kiaa0199mmu-miR-76196118acacaGUCAAAGUGGGAC-GACg | ||| : :|||| |||ctgaaCTGTTGTCTCCTGACTGt
Scap; Kiaa0199mmu-miR-7621638CGAGACAGGG--CCGGGGUCGGGg||| | |||| ||||| |||GCTAT-TCCCTTTCCCCCATCCCa
Scap; Kiaa0199mmu-miR-764-3p86112UGUCAACGG-----UGAUACCGGAGGA|:|| || | |||:| |:|||||ATAGCTGACTCTGAACTGTTGTCTCCT
Scap; Kiaa0199mmu-miR-770-3p3152GGUCGAGGUGCAGUCCGGGUgc||| | | | || :||| ||CCATCCCAAGGTGGGGCACAgg
Scap; Kiaa0199mmu-miR-8044767agGUCCACUCCUUGUUGAGugu |||| || |:||||||caCAGGGGA-TAGCAACTCttt
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
ScapRAID00483976mmu-miR-344imiRNAMIMAT0022503ScapmRNA235623Prediction0.1828
ScapRAID00513644mmu-miR-7024-5pmiRNAMIMAT0027952ScapmRNA235623Prediction0.1828
ScapRAID00681210mmu-miR-215-5pmiRNAMIMAT0000904ScapmRNA235623Prediction0.1828
ScapRAID00719532mmu-miR-876-3pmiRNAMIMAT0004855ScapmRNA235623Prediction0.1828
ScapRAID01088450mmu-miR-7023-5pmiRNAMIMAT0027950ScapmRNA235623Prediction0.1828
ScapRAID01329935mmu-miR-7119-5pmiRNAMIMAT0028135ScapmRNA235623Prediction0.1828
ScapRAID01870833mmu-miR-126b-5pmiRNAMIMAT0029894ScapmRNA235623Prediction0.1828
ScapRAID01884138mmu-miR-7073-5pmiRNAMIMAT0028052ScapmRNA235623Prediction0.1828
ScapRAID02711350mmu-miR-6941-5pmiRNAMIMAT0027782ScapmRNA235623Prediction0.1828
ScapRAID03272222mmu-miR-192-5pmiRNAMIMAT0000517ScapmRNA235623Prediction0.1828
ScapRAID03502195mmu-miR-140-5pmiRNAMIMAT0000151ScapmRNA235623Prediction0.1828
ScapRAID03952432mmu-miR-126a-5pmiRNAMIMAT0000137ScapmRNA235623Prediction0.1828
ScapRAID05028054G730013B05RiklncRNA619312Scapprotein235623Microarray//RNA-seq0.6606