SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3702238 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Scap | Mm_Celera | 9:110338881 | AGCTGCAGTGACTTT[C/T]CACCCTAGTCCAAAA | 235623 |
rs6155736 | snp | A/T | 0.5 | 0 | intron-variant | Scap | GRCm38.p3 | 9:110353420 | CTACGGGTTGTCTCA[A/T]ATGCTTGCTTCTCTT | 235623 |
rs6155819 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Scap | GRCm38.p3 | 9:110353472 | CCCTTGTTACTTGCC[G/T]GCTGTGTGGCAAGGT | 235623 |
rs6156279 | snp | C/T | 0.5 | 0 | intron-variant | Scap | GRCm38.p3 | 9:110353523 | ACTTGTGTTTCTTTT[C/T]TTTCACAGGCCTCAT | 235623 |
rs6156841 | snp | A/G | 0.5 | 0 | intron-variant | Scap | Mm_Celera | 9:110353625 | AACATTTTCAGCTAT[A/G]TGAAGAACCCACCTT | 235623 |
rs6156864 | snp | A/G | 0.5 | 0 | intron-variant | Scap | Mm_Celera | 9:110353641 | TGAAGAACCCACCTT[A/G]ATATAATTTTCTCTA | 235623 |
rs6305329 | snp | C/T | 0.5 | 0 | downstream-variant-500B, utr-variant-3-prime | Scap, Ptpn23 | Mm_Celera | 9:110385185 | GCCTGCAGTGCATCT[C/T]CATCTGGCAGAGCTG | 235623 |
rs6312216 | snp | G/T | 0.5 | 0 | intron-variant | Scap | GRCm38.p3 | 9:110341475 | ctgtgctgaggattt[G/T]gggtgggaacaagga | 235623 |
rs6312761 | snp | A/G | 0.5 | 0 | intron-variant | Scap | GRCm38.p3 | 9:110341570 | ccaggcctgatgcag[A/G]cttatattcccatct | 235623 |
rs6312793 | snp | A/C | 0.5 | 0 | intron-variant | Scap | GRCm38.p3 | 9:110341586 | cttatattcccatct[A/C]ccaaggaagactgag | 235623 |
rs6312824 | snp | A/G | 0.5 | 0 | intron-variant | Scap | GRCm38.p3 | 9:110341607 | gaagactgaggcagg[A/G]ggatggcaagttcat | 235623 |
rs6313694 | snp | C/T | 0.5 | 0 | intron-variant | Scap | GRCm38.p3 | 9:110341733 | TTCCTAGGTTCCCTC[C/T]TTTTACCAGAAGAAA | 235623 |
rs6314230 | snp | A/G | 0.5 | 0 | intron-variant | Scap | Mm_Celera | 9:110341823 | TGGTAGATTAGTggt[A/G]ggagatgtaactcan | 235623 |
rs6314254 | snp | A/G | 0.5 | 0 | intron-variant | Scap | GRCm38.p3 | 9:110341838 | nggagatgtaactca[A/G]cttgttgaatacttg | 235623 |
rs6402747 | snp | C/T | 0.5 | 0 | intron-variant | Scap | GRCm38.p3 | 9:110353181 | TATGCTTTCAGTTTG[C/T]CCCTTACGTGGTAGA | 235623 |
rs13480416 | snp | A/G | 0.232988 | 0.249421 | intron-variant | Scap | Mm_Celera | 9:110362838 | GATCCTAGGTAGTCA[A/G]AACAGCAGAGCATCC | 235623 |
rs29940312 | snp | C/G/T | 0.444444 | 0.157135 | intron-variant | Scap | GRCm38.p3 | 9:110334838 | GGGGGGGGGGGCGGG[C/G/T]GGGAAGTACCTCTCC | 235623 |
rs30183695 | snp | C/T | 0.375 | 0.216506 | intron-variant | Scap | GRCm38.p3 | 9:110335812 | AATGATTAAATAGAG[C/T]AGTCAGGGATATTAA | 235623 |
rs30378282 | snp | A/G | 0.21875 | 0.248039 | intron-variant | Scap | Mm_Celera | 9:110352518 | ACAAATGAGGAACTT[A/G]CAGTTTTCACCGTGA | 235623 |
rs33720744 | snp | C/T | 0.387812 | 0.208586 | intron-variant, upstream-variant-2KB | Scap | GRCm38.p3 | 9:110343696 | AGCATGTGGTTGGGG[C/T]CTTTCCTAGACTTTT | 235623 |
rs45651261 | snp | C/T | 0.152778 | 0.230321 | intron-variant | Scap | Mm_Celera | 9:110368049 | TTACTGTTCCTTCCC[C/T]GGAGGATCTCTGGTA | 235623 |
rs45746742 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Scap | GRCm38.p3 | 9:110352642 | ATTTGAGACTCGCAT[C/T]TCCAGACTCTACATA | 235623 |
rs45748598 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110367696 | TATGAACACTTCTGC[A/G]TCCATTGTCACTCAT | 235623 |
rs45795246 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110370199 | GCTCTGGGAGTGAGA[C/T]GGCTACACACCAAGT | 235623 |
rs45808482 | snp | C/T | 0.132653 | 0.220748 | synonymous-codon | Scap | GRCm38.p3 | 9:110373073 | CCCGAACATGGCTGC[C/T]TGCTGCTGTCCCCTG | 235623 |
rs45827705 | snp | G/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110346895 | CAAAATAAAAATCAC[G/T]CCCTCAAGACCCAGG | 235623 |
rs45839061 | snp | A/C | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110345099 | GCAGTCGTATGGAGA[A/C]CATGTGGTCAGGAGA | 235623 |
rs45907580 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110372121 | AGGGCGTATTTTCCC[A/G]ACACCTAACTCATTA | 235623 |
rs45943287 | snp | G/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110350467 | CAATGTGGAACAGAC[G/T]TGAACTTGAACCTTA | 235623 |
rs46024287 | snp | C/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110346083 | GAGGCCAGGGTCCCA[C/T]GATCTCCTTCAAGAA | 235623 |
rs46039577 | snp | C/T | | | intron-variant | Scap | GRCm38.p3 | 9:110335209 | TGGTTTTCATTCTCT[C/T]TCCCGTGGAACCAGT | 235623 |
rs46076395 | snp | A/G | 0.165289 | 0.235211 | downstream-variant-500B, utr-variant-3-prime | Scap, Ptpn23 | Mm_Celera | 9:110385123 | ATTTCAGCAGCCCAG[A/G]GCTGGAAAAATGTCA | 235623 |
rs46185206 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Scap | GRCm38.p3 | 9:110368957 | TCCTTTGCTGAAATA[C/T]AGGCCCAAGCCAGGC | 235623 |
rs46192516 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Scap | GRCm38.p3 | 9:110366739 | ACTTCTAAGCCAGCA[A/G]TGTAGTGTTTGTGGT | 235623 |
rs46195213 | snp | A/G | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110373507 | CCAAGTAAGGTGCTC[A/G]GGTTCTCGTACTCTG | 235623 |
rs46251390 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Scap | Mm_Celera | 9:110364567 | CGTGGCGGCAGCAGA[A/G]TGTGGTGGAAGAGCC | 235623 |
rs46255109 | snp | C/T | | | intron-variant | Scap | GRCm38.p3 | 9:110335323 | GGAACTTACCACTGT[C/T]CTGAGTTGGCTAAAG | 235623 |
rs46263239 | snp | A/C | 0.142012 | 0.225474 | intron-variant | Scap | GRCm38.p3 | 9:110351202 | TGCACAGAAGAGGAC[A/C]GGGAGGATGTTCAGA | 235623 |
rs46345198 | snp | A/G | 0.489796 | 0.070696 | intron-variant | Scap | GRCm38.p3 | 9:110365185 | CAGGGCCCTGTGCTA[A/G]CTGCCTTCCGCATGA | 235623 |
rs46422739 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Scap | Mm_Celera | 9:110370068 | TAGGAATGTTCCATG[A/G]CATGGCACGTGAATG | 235623 |
rs46506713 | snp | C/T | 0.32 | 0.24 | intron-variant | Scap | Mm_Celera | 9:110350731 | GCCATCTCTGTGGGG[C/T]GAATAGGAACTACCG | 235623 |
rs46595807 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110372168 | CGTGCTCAGTGTTTC[C/T]TTTCTACCCCGTCCT | 235623 |
rs46694853 | snp | A/T | | | intron-variant | Scap | Mm_Celera | 9:110346697 | GTTTTGACCTAGCTA[A/T]TGGGATGAACCAAGA | 235623 |
rs46716848 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Scap | Mm_Celera | 9:110365110 | TGCTTGGACTGCTTG[C/T]AAGGTCACTAGGTAT | 235623 |
rs46729447 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110345579 | TAACTCGAGATTGGC[C/T]TGACGTGAATTATTA | 235623 |
rs46874185 | snp | A/G | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110349955 | CTAAAGCTTGGGTTT[A/G]TTTTCCATATGCTCT | 235623 |
rs46956800 | snp | C/G | 0.132653 | 0.220748 | intron-variant | Scap | Mm_Celera | 9:110365284 | CCAATGTTTTACGCA[C/G]CACAGATGCCCAAGA | 235623 |
rs46991972 | snp | A/C | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110348461 | GGATGGTATGTTGTT[A/C]TGTTGCTCAGGCTGG | 235623 |
rs47055089 | snp | A/C | 0.152778 | 0.230321 | intron-variant | Scap | Mm_Celera | 9:110360079 | TCTAGCACTTATGTA[A/C]GAGGTTCCAATATTA | 235623 |
rs47069852 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Scap | GRCm38.p3 | 9:110365224 | CTGGGCCTCTGCTTG[C/T]ATTGCCGTGCTGTGA | 235623 |
rs47103671 | snp | C/T | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Scap | Mm_Celera | 9:110342224 | TACTCAGAGAGAAAG[C/T]AGGAAAGCCTGGCAG | 235623 |
rs47268749 | snp | C/G | 0.32 | 0.24 | synonymous-codon | Scap | GRCm38.p3 | 9:110374081 | GAACCTGGTCCACGT[C/G]CACTTCAAAGAGGAG | 235623 |
rs47288960 | snp | A/G | | | intron-variant | Scap | GRCm38.p3 | 9:110334593 | CTAGGGCATTGGTCT[A/G]CCACTGAGTAACACC | 235623 |
rs47406480 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110368145 | AATATGGAGTCCCTC[C/T]GCTCTACTTGCTCAG | 235623 |
rs47601225 | snp | A/G | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Scap | Mm_Celera | 9:110342301 | GCATAGCAGTAGCAA[A/G]GGCGCATTGAGAACG | 235623 |
rs47662119 | snp | C/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110350076 | GGCCCCACAGTTGAA[C/T]GGGTCCTCTTGCTGG | 235623 |
rs47679629 | snp | A/G | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110369156 | GGAATTTAGGCCCAC[A/G]TGATTCTGGGTGTGA | 235623 |
rs47700755 | snp | A/G | 0.32 | 0.24 | synonymous-codon | Scap | GRCm38.p3 | 9:110373156 | TGGGACCATCCATCA[A/G]CATGAGCCCAAAACT | 235623 |
rs47789946 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Scap | Mm_Celera | 9:110356364 | TCCCTTTCTATCCAC[A/G]TCTCAGGTTGTTCTA | 235623 |
rs48138925 | snp | C/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110350375 | GTCATCCTTATAGCC[C/T]GGTTGTCATCAGGGA | 235623 |
rs48205826 | snp | C/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110346338 | CCAAATACAGTGAGA[C/T]GGGACTGTCTGTAGT | 235623 |
rs48261791 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Scap | GRCm38.p3 | 9:110366012 | GCTCTGCTAGGTAGT[C/T]CATGGATGTGAAGCA | 235623 |
rs48291752 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Scap | Mm_Celera | 9:110366556 | GAAAAGCCCGAGGGC[C/T]TCAGCACTTGCATGC | 235623 |
rs48316206 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110372948 | ATGCTGGCAGAAACA[G/T]CAGCGGCTTCCTCCG | 235623 |
rs48377822 | snp | C/G/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110350577 | AAAATTAGCAGCAAA[C/G/T]AGCAAATTAACTTTA | 235623 |
rs48394054 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Scap | GRCm38.p3 | 9:110346824 | TTTACTGCTGTTGTT[A/C]TACTGTTGCTACTGT | 235623 |
rs48479277 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110366602 | TGTCTTGGTGACTGG[A/G]ACCTGACTACTTACG | 235623 |
rs48496868 | snp | C/T | 0.32 | 0.24 | synonymous-codon | Scap | Mm_Celera | 9:110377727 | CACCCTCGTGCCTGC[C/T]ATCCAGGTAATGCTC | 235623 |
rs48505171 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Scap | GRCm38.p3 | 9:110350989 | TGTGAACCAAGAACA[A/G]AGGCTGTAAGCCAGT | 235623 |
rs48539703 | snp | C/T | | | synonymous-codon | Scap | GRCm38.p3 | 9:110362412 | CCCGCTGCTGAAGCT[C/T]CCCTTGCCTGGAACG | 235623 |
rs48602337 | snp | A/G | 0.260355 | 0.249785 | intron-variant | Scap | Mm_Celera | 9:110375887 | TCTCAGGCAGACATA[A/G]GAAAAACCACTTTGC | 235623 |
rs48633719 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110367730 | GGCTACCATTCCTAT[C/T]TGCGTCCATACCTCT | 235623 |
rs48912083 | snp | A/G | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110346524 | ATGGTATTAAACTAG[A/G]AGAGGGACTAAGATT | 235623 |
rs49140330 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110348437 | CAGCCAGCTTGCTGG[A/G]AGGCGGCAGGATGGT | 235623 |
rs49154889 | snp | A/C | | | intron-variant | Scap | GRCm38.p3 | 9:110334606 | CTGCCACTGAGTAAC[A/C]CCTGTGGCTTTTTAT | 235623 |
rs49190158 | snp | A/T | | | intron-variant | Scap | Mm_Celera | 9:110360658 | TACACTTATTTAAAA[A/T]TTTTTTATTTTTATA | 235623 |
rs49340130 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110372897 | TTTAGGAACTCGATG[A/G]CAGATGATTCCCCAT | 235623 |
rs49380162 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Scap | GRCm38.p3 | 9:110373778 | CCTCTGTCTTCTGAG[C/T]AGGCCACTGCAGGCA | 235623 |
rs49400336 | snp | A/G | 0.32 | 0.24 | intron-variant | Scap | Mm_Celera | 9:110341099 | TATTTTGTCACAACC[A/G]CATTTCTCTGGGACC | 235623 |
rs49494681 | snp | C/T | | | intron-variant | Scap | GRCm38.p3 | 9:110337352 | CAGATATTTTCTCCC[C/T]TTTTTTTTTTTTTTT | 235623 |
rs49550351 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110345977 | CAGTTGAGTTGCTTT[A/G]TGGCCTGCAGAGAGG | 235623 |
rs49605821 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Scap | GRCm38.p3 | 9:110346477 | AGTGTGTGTGAGGTT[A/C]CATAGCTGAAATGCT | 235623 |
rs49607661 | snp | C/T | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Scap | Mm_Celera | 9:110342272 | GTTAAGGAAGCCAGA[C/T]GTAATACTCTGCAGC | 235623 |
rs49650856 | snp | A/C | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Scap | Mm_Celera | 9:110342332 | TCTCAGAAATCGGCC[A/C]GCTTCTGCCTATAGC | 235623 |
rs49698091 | snp | C/T | | | intron-variant | Scap | GRCm38.p3 | 9:110335349 | TAAAGAAACAAGATC[C/T]GGGTGACTTTAGCCA | 235623 |
rs49729803 | snp | A/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110346866 | CTTTGGGAAGAAGAT[A/T]TGGACTCAAGACACA | 235623 |
rs49918931 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Scap | Mm_Celera | 9:110357525 | TGTTAGAGCAGTAAA[C/T]ATAAACAGAGCACTC | 235623 |
rs49935160 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110370356 | AAAATTCCATCTCTG[A/G]GGTGCGAGTGGGCAG | 235623 |
rs49954998 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Scap | Mm_Celera | 9:110369411 | AATGTGTGCCAAGTC[A/G]GCAAATCGCCACAGG | 235623 |
rs50314758 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Scap | GRCm38.p3 | 9:110345630 | GAGCAGTTTTAGTAG[C/T]GTGGTGATTGGTGGT | 235623 |
rs50326735 | snp | C/T | 0.165289 | 0.235211 | synonymous-codon | Scap | GRCm38.p3 | 9:110377706 | CATCATCCTCATTGG[C/T]TACTTCACCCTCGTG | 235623 |
rs50444395 | snp | A/G | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110346391 | TCTGCTATTCATTGG[A/G]TTCTGTAGGGTTCTG | 235623 |
rs50590281 | snp | C/G | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110346910 | TCCCTCAAGACCCAG[C/G]AATAAAGCCTGTCTA | 235623 |
rs50630456 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Scap | GRCm38.p3 | 9:110373854 | CTTCTGGGCCTCTGG[C/G]ACCTGGAACCAGGTG | 235623 |
rs50811071 | snp | G/T | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Scap | GRCm38.p3 | 9:110343182 | GCCCTCCTCCTTTCC[G/T]GTACCACAGTTTATC | 235623 |
rs50872561 | snp | A/C | | | intron-variant | Scap | Mm_Celera | 9:110358192 | AGACAGACTGACTGA[A/C]TAAGGTGCCTCTGGA | 235623 |
rs50915840 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Scap | GRCm38.p3 | 9:110369390 | CCCTTGTCCTTCACC[C/T]AGGCTAATGTGTGCC | 235623 |
rs50947869 | snp | G/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110373560 | TTGCTTCTCTGACCA[G/T]CATGGCCCCAGGCCT | 235623 |
rs51002194 | snp | C/T | 0.32 | 0.24 | intron-variant | Scap | GRCm38.p3 | 9:110349281 | TCTCTGCTCTACTCA[C/T]GCCCTTATCCTTTCA | 235623 |
rs51061866 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Scap | GRCm38.p3 | 9:110358083 | GCATGCGCTTAACAC[A/G]CCGGAGATAATAAAA | 235623 |