DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Traip | mmu-miR-199a-5p | beg:130 | end:148 | pic:3' CTTGTCCATCAGACT---TGTGACCC 5'& ||| |||||||| &5' -----------CTGCACCACACTGGG 3' |
Traip | mmu-miR-199bstar | beg:137 | end:148 | pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |||||||| &5' ---------------ACACTGGG 3' |
Traip | mmu-miR-10a | beg:253 | end:263 | pic:3' GTGTTTAAGCCTAGATGTCCCAT 5'& ||||||| &5' ---------------ACAGGGT- 3' |
Traip | mmu-miR-10b | beg:253 | end:263 | pic:3' GTGTTTAAGCCAAGATGTCCCAT 5'& ||||||| &5' ---------------ACAGGGT- 3' |
Traip | mmu-miR-2145 | beg:304 | end:323 | pic:3' TTGGTCCGGG---CTGGGACGA 5'& |||||. |||||||| &5' ---CAGGCTGGAGGACCCTGC- 3' |
Traip | mmu-miR-15astar | beg:702 | end:718 | pic:3' ACTCCGTCGTGTCATACCGGAC 5'& ||. ||| ||||||| &5' ------AGT-CAG-ATGGCCT- 3' |
Traip | mmu-miR-582-5p | beg:628 | end:642 | pic:3' TCATTGACCAACTTGTTGACAT 5'& ||| ||||||| &5' ----------TGACCAACTGT- 3' |
Traip | mmu-miR-504 | beg:249 | end:264 | pic:3' CTATCTCACGTCTGGTCCCAGA 5'& .||| ||||||| &5' ---------TAGAACAGGGTC- 3' |
Traip | mmu-miR-145star | beg:798 | end:808 | pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||||||| &5' --------------CCAGGAA- 3' |
Traip | mmu-miR-3475 | beg:328 | end:347 | pic:3' AAGTTTGGTACACGGAGGTCT 5'& || .|| ||||||||| &5' -TCCTGCC---TGCCTCCAG- 3' |
Traip | mmu-miR-291a-5p | beg:858 | end:874 | pic:3' TCTCTCCCGGAGGTGAAACTAC 5'& ||.| .||||||| &5' -------GCTTA-GCTTTGAT- 3' |
Traip | mmu-miR-291b-5p | beg:858 | end:875 | pic:3' CCTCTCCCGGAGGTGAAACTAG 5'& ||.| .|||||||. &5' -------GCTTA-GCTTTGATT 3' |
Traip | mmu-miR-219 | beg:774 | end:791 | pic:3' TCTTAACGCAAACCTGTTAGT 5'& ||| ||||||| &5' -----TGCTGAA-GACAATC- 3' |
Traip | mmu-miR-141star | beg:51 | end:71 | pic:3' AGGTTGTGACGT-GACCTTCTAC 5'& | ||. .||||||||| &5' ------AGTGTTTTTGGAAGATG 3' |
Traip | mmu-miR-671-5p | beg:739 | end:757 | pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& |||.| | ||||||| &5' ----AGCTCA--CT-GGCTTCC- 3' |
Traip | mmu-miR-1982.1 | beg:354 | end:374 | pic:3' GACACCCTCTT--GTATCCCACTCT 5'& ||| .||.|||||||. &5' --------GAAATTATGGGGTGAGG 3' |
Traip | mmu-miR-2183 | beg:648 | end:664 | pic:3' TCCTCCAGTCCCCAAGTT 5'& .|| | |||||||. &5' ---GGG-CTTGGGTTCAG 3' |
Traip | mmu-miR-872 | beg:1122 | end:1139 | pic:3' GGACTTGATTGTTCATTGGAA 5'& ||||| ||||||| &5' --TGAACCT----GTAACCT- 3' |
Traip | mmu-miR-547 | beg:445 | end:462 | pic:3' GAGTGAGTTTCTACATGGTTC 5'& .||| |||||||| &5' ------TAAATTTGTACCAA- 3' |
Traip | mcmv-miR-m01-1 | beg:897 | end:920 | pic:3' GGCAAGCTGCAATA-AGAGGAGA 5'& ||| || ||||||. &5' -CGTG-GAAAGGGCCTCTCCTT- 3' |
Traip | mcmv-miR-m108-2-3p | beg:689 | end:710 | pic:3' TGGCCAGTGAGCAGAGCTCAGTG 5'& ..|| ||||.| || |||||| &5' -TTGGCCACTTGCCT-GAGTCA- 3' |
Traip | mcmv-miR-m22-1 | beg:379 | end:398 | pic:3' ACCGGAGCCATG-CCTGCCCCTT 5'& || || .|||||| &5' -------GGGAAAGGTTGGGGAA 3' |
Traip | mcmv-miR-M23-2 | beg:327 | end:346 | pic:3' GGCGAACTGGCTCCGGGGGTA 5'& | | || || |||.||| &5' -CTCCTG-CCT--GCCTCCA- 3' |
Traip | mghv-miR-M1-8 | beg:180 | end:200 | pic:3' CTGGTTTGGGGGTCACTCACGA 5'& |.|| ||..||||| ||| &5' GGCCT-ACTTCCAGT---TGC- 3' |
Traip | mmu-let-7a | beg:326 | end:344 | pic:3' TTGATATGTTGGAT-GATGGAGT 5'& || |||. ||.|||| &5' ------ACT-CCTGCCTGCCTC- 3' |
Traip | mmu-let-7b | beg:316 | end:344 | pic:3' TTGGTGTGTT-----GGAT-GATGGAGT 5'& | |.| |||. ||.|||| &5' --CTGCGCTTGAACTCCTGCCTGCCTC- 3' |
Traip | mmu-let-7c | beg:320 | end:344 | pic:3' TTGGTA-TGTTGGAT-GATGGAGT 5'& .|. || |||. ||.|||| &5' -GCTTGAACT-CCTGCCTGCCTC- 3' |
Traip | mmu-let-7d | beg:323 | end:344 | pic:3' TTGATACGTT-GGAT-GATGGAGA 5'& || |||. ||.|||| &5' -----TGAACTCCTGCCTGCCTC- 3' |
Traip | mmu-let-7e | beg:320 | end:344 | pic:3' TTGATA-TGTTGGA-GGATGGAGT 5'& .|| || ||| |||.|||| &5' -GCTTGAACT-CCTGCCTGCCTC- 3' |
Traip | mmu-let-7fstar | beg:431 | end:450 | pic:3' CCCTTCCGTTATCTAACATATC 5'& |||| | |||||| &5' ----AGGCTCT-GGCTGTATA- 3' |
Traip | mmu-miR-10a | beg:187 | end:205 | pic:3' GTGTTTAAGCCTAGATGTCCCAT 5'& ||| .|.|||||| &5' ------TTCCAG-TTGCAGGGT- 3' |
Traip | mmu-miR-10b | beg:187 | end:205 | pic:3' GTGTTTAAGCCAAGATGTCCCAT 5'& ||| .|.|||||| &5' ------TTCCAG-TTGCAGGGT- 3' |
Traip | mmu-miR-1188 | beg:745 | end:767 | pic:3' AGGACCGGGTTG-GAGTGTGGT 5'& |||||.. | |||||||| &5' --CTGGCTTCCCTCTCACACC- 3' |
Traip | mmu-miR-1188 | beg:328 | end:348 | pic:3' AGGACCGGGTTGGAGTGTGGT 5'& |||| |||. .|||| || | &5' TCCT-GCCT-GCCTC-CAGC- 3' |
Traip | mmu-miR-1198 | beg:1042 | end:1064 | pic:3' GGTTCGG-TCG-GTCCTTGTGTAT 5'& .|||. ||| || ||||||||. &5' --GAGCTGAGCACAAGAACACATG 3' |
Traip | mmu-miR-122 | beg:96 | end:117 | pic:3' GTTTGTGGTAACA-GTGTGAGGT 5'& .| ||| ||||||.| &5' ---GC-CCAGAAAACACACTTC- 3' |
Traip | mmu-miR-132 | beg:629 | end:644 | pic:3' GCTGGTACCGACATCTGACAAT 5'& ||||| ||||||| &5' -GACCA---------ACTGTTA 3' |
Traip | mmu-miR-133a | beg:0 | end:13 | pic:3' GTCGACCAACTTCCCCTGGTTT 5'& || |||||.| &5' ------------GGTGACCAGA 3' |
Traip | mmu-miR-133b | beg:0 | end:13 | pic:3' ATCGACCAACTTCCCCTGGTTT 5'& || |||||.| &5' ------------GGTGACCAGA 3' |
Traip | mmu-miR-139-5p | beg:937 | end:959 | pic:3' GACCTCTGTGCACGTGACATCT 5'& ||| |.||.|| ||||.|| &5' CTGTGGGCATGT---CTGTGGA 3' |
Traip | mmu-miR-143 | beg:947 | end:969 | pic:3' CTC-GATGTCACGAAGTAGAGT 5'& | ||. | | |.||||. &5' --GTCTGTGGAGGGTTATCTT- 3' |
Traip | mmu-miR-145star | beg:524 | end:540 | pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||| |||||| &5' ------CAGGGCA--CAGGAA- 3' |
Traip | mmu-miR-146bstar | beg:633 | end:655 | pic:3' TGGTCTTGAC--TCAGGGATCCCG 5'& ||| |||| || |.||||||| &5' -CCA--ACTGTTAGCCTCTAGGGC 3' |
Traip | mmu-miR-154 | beg:829 | end:849 | pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& || || |. ||||.||| &5' -GATGGAGAT---GATAGCCT- 3' |
Traip | mmu-miR-154 | beg:1119 | end:1140 | pic:3' GCTTCCGTTG--TGCCTATTGGAT 5'& ||||. || .||||||. &5' -----GCAATGAACCTGTAACCTG 3' |
Traip | mmu-miR-154 | beg:707 | end:719 | pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& |||..|||| &5' -------------GATGGCCTA 3' |
Traip | mmu-miR-182 | beg:790 | end:806 | pic:3' GCCACACTCAAGATGGT-AACGGTTT 5'& |||| ||||||.. &5' -------------ACCACTTGCCAGG 3' |
Traip | mmu-miR-1839-5p | beg:1090 | end:1111 | pic:3' GTTCTGGACAAGAT---AGATGGAA 5'& ||| || |||.||| &5' ------CTGCTCCACCCTCTGCCT- 3' |
Traip | mmu-miR-1894-5p | beg:362 | end:389 | pic:3' TCTCCG-TCCACCATC--CCCTCTC 5'& |.||. |||||||. |||| || &5' -GGGGTGAGGTGGTGATAGGGAAAG 3' |
Traip | mmu-miR-1929 | beg:1090 | end:1114 | pic:3' GAGACGAGATATTTCA-GGATCTT 5'& |||||| |||||| &5' --CTGCTCCACCCTCTGCCTAGA- 3' |
Traip | mmu-miR-1930 | beg:943 | end:961 | pic:3' TGCGACGTCCATGATACCTCCA 5'& ||| || ||.|||||| &5' -----GCATGT-CTGTGGAGG- 3' |
Traip | mmu-miR-1934 | beg:0 | end:13 | pic:3' TCTCCTGCTTCGTCCCCTGGTCT 5'& || ||||||| &5' -------------GGTGACCAGA 3' |
Traip | mmu-miR-1935 | beg:1090 | end:1111 | pic:3' TCTCTAGGCGGTC--GGAGACGGA 5'& |.||. ||||||||| &5' ------CTGCTCCACCCTCTGCCT 3' |
Traip | mmu-miR-1937c | beg:140 | end:149 | pic:3' ACCCCCGAGAAGGCCCTA 5'& |.|||| &5' -----------CTGGGA- 3' |
Traip | mmu-miR-193star | beg:300 | end:320 | pic:3' AGTAGAACGGGCG--TTTCTGGGT 5'& ||| || .|.||||| &5' ------TGCAGGCTGGAGGACCC- 3' |
Traip | mmu-miR-193star | beg:26 | end:43 | pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& |. || ||||||. &5' -------GTGGGCCAAGACCT- 3' |
Traip | mmu-miR-1940 | beg:327 | end:346 | pic:3' TTGACGAGG-TGGAAGAGTCAGGAGGTA 5'& |||| .||| |||||| &5' -----CTCCTGCCTG------CCTCCA- 3' |
Traip | mmu-miR-1941-3p | beg:278 | end:299 | pic:3' TACCCTCTATGACGATTCTAC 5'& ||||||| |.||| |.||| &5' ATGGGAG-TGCTGG-AGGAT- 3' |
Traip | mmu-miR-1948 | beg:1090 | end:1114 | pic:3' GACATGCTCACGAGACGGATTT 5'& ||| | |||||||||.| &5' CTGCTCCACC-CTCTGCCTAGA 3' |
Traip | mmu-miR-1956 | beg:1000 | end:1025 | pic:3' AGGCGA-CTGAG-TC-GGGACCTGA 5'& || || |.| .| .|||||.|| &5' -CC-CTAGGCGGAGGATCCTGGGCT 3' |
Traip | mmu-miR-1959 | beg:911 | end:932 | pic:3' GAGGTGACTC--GATGTAGGGG 5'& |||| .|||| ||| ||. &5' CTCC-TTGAGATCTAGATT--- 3' |
Traip | mmu-miR-1959 | beg:119 | end:140 | pic:3' GAGGTGACTCG--ATGTAGGGG 5'& |.||||| || |.|| || &5' -TTCACTGCGCCCTGCA-CC-- 3' |
Traip | mmu-miR-1962 | beg:631 | end:650 | pic:3' TACACAGGGTC-ACGGTCGGAGA 5'& ||| ||..||||||| &5' -------CCAACTGTTAGCCTCT 3' |
Traip | mmu-miR-1967 | beg:417 | end:441 | pic:3' CGTAGAAGAG-GGGTCCTAGGAGT 5'& |||||||.|| .|.||| ||. &5' GCATCTTTTCTTCTAGGCTCT--- 3' |
Traip | mmu-miR-1968 | beg:181 | end:201 | pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& .|| ||| |||.|||| &5' -----GCCTA-CTTC-CAGTTGCA 3' |
Traip | mmu-miR-1982star | beg:741 | end:763 | pic:3' GGAGGGGTCCT-GGGAGGGTT 5'& ||| | | |||||.|| &5' -CTCACTGGCTTCCCTCTCA- 3' |
Traip | mmu-miR-202-5p | beg:367 | end:384 | pic:3' TTTCTTCATATACGTATCCTT 5'& ||.||. .|| |||||.| &5' ---GAGGTG-GTG-ATAGGGA 3' |
Traip | mmu-miR-2135 | beg:1101 | end:1118 | pic:3' CAAAGCCGGGGTTCTGGAGA 5'& || |||. ||||.|| &5' ---TCTGCCT--AGACTTC- 3' |
Traip | mmu-miR-2140 | beg:120 | end:140 | pic:3' TGGTGGTTCTAGACGTGGA 5'& .|||.. | ||||||| &5' -TCACTGCGCCCTGCACC- 3' |
Traip | mmu-miR-2141 | beg:107 | end:119 | pic:3' TTGAAAAGACTGTGGAGGA 5'& ||||.|||| &5' ----------ACACTTCCT 3' |
Traip | mmu-miR-2145 | beg:123 | end:137 | pic:3' TTGGTCCGGGC-TGGGACGA 5'& |.| .|||||| &5' --------CTGCGCCCTGC- 3' |
Traip | mmu-miR-218 | beg:1039 | end:1056 | pic:3' TGTACCAATCTA-GTTCGTGTT 5'& ||| ..||||||| &5' --------AGAGCTGAGCACAA 3' |
Traip | mmu-miR-218 | beg:598 | end:620 | pic:3' TGTAC-CAATCTAGTTCGTGTT 5'& .|| ||| ||||||||| &5' --GTGAGTTCCAGCAAGCACAA 3' |
Traip | mmu-miR-2182 | beg:370 | end:396 | pic:3' GCGCCGCA--CCCTTTAC-ACCGCA 5'& |.||.| |||||| ||| | &5' -GTGGTGATAGGGAAAGGTTGGGG- 3' |
Traip | mmu-miR-222 | beg:205 | end:234 | pic:3' TGGGTCATCG------GTCTACATCGA 5'& .|..| |||| |||.|||.||| &5' GCTTA-TAGCTACAACCAGGTGTGGCT 3' |
Traip | mmu-miR-24 | beg:694 | end:710 | pic:3' GACAAGGACGACTTGACTCGGT 5'& |.||| |||||.|| &5' -----CTTGC----CTGAGTCA 3' |
Traip | mmu-miR-26a | beg:342 | end:360 | pic:3' TCGGATAGGACCTAATGAACTT 5'& |||.|||. .|||||| &5' AGCTTATT-------GCTTGAA 3' |
Traip | mmu-miR-26b | beg:315 | end:330 | pic:3' TGGATAGGACTTAATGAACTT 5'& |||| .|||||| &5' ------CCTGC---GCTTGAA 3' |
Traip | mmu-miR-26b | beg:337 | end:360 | pic:3' TGGATAGGACT--TAATGAACTT 5'& .|| ||| |||.|||||| &5' GCC--TCCAGCTTATTGCTTGAA 3' |
Traip | mmu-miR-27bstar | beg:421 | end:441 | pic:3' CAAGTGGTTAGTCGATTCGAGA 5'& |. || |||.||||| &5' -----CTTTTCTTCTAGGCTCT 3' |
Traip | mmu-miR-28 | beg:58 | end:76 | pic:3' GAGTTATCTGACACTCGAGGAA 5'& | . |||. .|||||| &5' -TTGGAAGAT----GGCTCCT- 3' |
Traip | mmu-miR-2861 | beg:330 | end:350 | pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.|||.||| ||| ||.. &5' CTGCCTGCCTCCA-GCTT- 3' |
Traip | mmu-miR-298 | beg:1089 | end:1110 | pic:3' CCCTTCTTGTCGGGA--GGAGACGG 5'& || ||.| |||||||| &5' -------ACTGCTCCACCCTCTGCC 3' |
Traip | mmu-miR-302cstar | beg:286 | end:310 | pic:3' CGTCCA-TTGGGGTACAATTTCG 5'& || || .|.||.||| |.|| &5' GCTGGAGGATCCTATGC--AGGC 3' |
Traip | mmu-miR-3099star | beg:271 | end:294 | pic:3' GTTC-CCGACCTTCCTTCGACC 5'& .||| || |||.|| ||||| &5' TAAGTGGATGGGAGT--GCTGG 3' |
Traip | mmu-miR-30a | beg:5 | end:25 | pic:3' GAAGGTCAGCTCCTACAAATGT 5'& |||| | ||||||.|| &5' ---CCAGA-GTC-ATGTTTGCA 3' |
Traip | mmu-miR-30b | beg:8 | end:25 | pic:3' TCGACTCACATCCTACAAATGT 5'& |||| ||||||.|| &5' ----GAGTC----ATGTTTGCA 3' |
Traip | mmu-miR-30c-1star | beg:514 | end:530 | pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& ..|.||||||||| &5' ---------GGCTCTCTCCCAG 3' |
Traip | mmu-miR-30c-2star | beg:514 | end:530 | pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& .|| |||||||| &5' ---------GGCTCTCTCCCAG 3' |
Traip | mmu-miR-30d | beg:5 | end:25 | pic:3' GAAGGTCAGCCCCTACAAATGT 5'& |||| | ||||||.|| &5' ---CCAGA--GTCATGTTTGCA 3' |
Traip | mmu-miR-30e | beg:5 | end:25 | pic:3' GAAGGTCAGTTCCTACAAATGT 5'& |||| ||||||.|| &5' ---CCAGAGTC--ATGTTTGCA 3' |
Traip | mmu-miR-31star | beg:503 | end:515 | pic:3' CTACCGTTATACAACCGTATCGT 5'& |||||.||| &5' --------------GGCATGGCA 3' |
Traip | mmu-miR-322star | beg:6 | end:22 | pic:3' CACAACGTCGCGAAGTACAAA 5'& ||| |||||||| &5' ------CAGAG--TCATGTTT 3' |
Traip | mmu-miR-328 | beg:19 | end:37 | pic:3' TGCCTTCCCGTC--TCTCCCGGTC 5'& ||| || |||||| &5' --------GCAATTAGTGGGCCA- 3' |
Traip | mmu-miR-331-5p | beg:1010 | end:1033 | pic:3' CCTAGGGACCCTGGTATGGATC 5'& |||| |||||| |..| || &5' GGAT-CCTGGG-CTGTTTAAAG 3' |
Traip | mmu-miR-337-3p | beg:1028 | end:1050 | pic:3' TC-CGTAGTATATCCTCGACTT 5'& || ||| |||||||. &5' AGAGCAAACAAA--GAGCTGAG 3' |
Traip | mmu-miR-3473 | beg:415 | end:430 | pic:3' CCGACTCGGTAGAGAGGT 5'& || |||||.|.| &5' -----AGGCATCTTTTC- 3' |
Traip | mmu-miR-3474 | beg:510 | end:532 | pic:3' CTTAGGTGCA-GAG-GAGGGTCCC 5'& ||. ||| ||||||||| &5' -----CATTGGCTCTCTCCCAGGG 3' |
Traip | mmu-miR-3475 | beg:631 | end:653 | pic:3' AAGTTTGGT--ACA--CGGAGGTCT 5'& .|||| ||| |||||.||. &5' ----GACCAACTGTTAGCCTCTAGG 3' |
Traip | mmu-miR-34a | beg:1082 | end:1098 | pic:3' TGTTGGTCGATTCTGTGACGGT 5'& |||| ||||||. &5' -------GCTACT-CACTGCT- 3' |
Traip | mmu-miR-34c | beg:1079 | end:1098 | pic:3' CGTTAGTCGAT-TGATGTGACGGA 5'& ||| ||| ||||||. &5' ------AGCGCTACT-CACTGCT- 3' |
Traip | mmu-miR-34cstar | beg:361 | end:381 | pic:3' GGACCGACACACCAATCACTAA 5'& ||| ||| || |.||||| &5' --TGGG-GTGAGG-TGGTGAT- 3' |
Traip | mmu-miR-370 | beg:155 | end:184 | pic:3' TGGTC------CAAGGTGGGGTCGTCCG 5'& ||||| |||||. .||||||| &5' ACCAGTTTACTGTTCCGA-TCAGCAGG- 3' |
Traip | mmu-miR-376c | beg:390 | end:409 | pic:3' TGCACTTTAAAGGAGATACAA 5'& | | |..|||.||| &5' ----GGGAAGTTTTCTGTGT- 3' |
Traip | mmu-miR-378star | beg:648 | end:667 | pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& .|||.|.||| |||||| &5' ---TAGGGCTTGGGTTCAGGA- 3' |
Traip | mmu-miR-432 | beg:258 | end:278 | pic:3' GACGG-GTGACTAGATGAGGTTCT 5'& |.| ||.||| |||.||| &5' --GTCACATTGA----CTCTAAG- 3' |
Traip | mmu-miR-432 | beg:627 | end:654 | pic:3' GAC-GGGTGACTAGATGAGGTTCT 5'& ||| || |||| |||.|.|. &5' CTGACCAACTGTTAGCCTCTAGGG 3' |
Traip | mmu-miR-449a | beg:1079 | end:1098 | pic:3' TGGTCGAT-TGTTATGTGACGGT 5'& ||| || ||||||. &5' ---AGCGCTACT---CACTGCT- 3' |
Traip | mmu-miR-450b-5p | beg:560 | end:579 | pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||| || ||||.||| &5' ----CAGTC-CAAACTGTAAA- 3' |
Traip | mmu-miR-452 | beg:598 | end:617 | pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& | || |||| ||||.|| &5' ---TGAG-TTCCA--GCAAGCA 3' |
Traip | mmu-miR-452 | beg:291 | end:310 | pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& || |||| ||||..| &5' -----AGGATCCTATGCAGGC- 3' |
Traip | mmu-miR-470 | beg:72 | end:95 | pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& ||| . | |||||||||||. &5' -CTC-TTGGA-CCAGTCCAAGAG 3' |
Traip | mmu-miR-483star | beg:276 | end:298 | pic:3' TTCTGCCCTC-C--CCTCCTCACT 5'& .||.||||| | |||||| &5' -GGATGGGAGTGCTGGAGGA---- 3' |
Traip | mmu-miR-485 | beg:634 | end:650 | pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& || |..||||||| &5' ---------ACTGTTAGCCTCT 3' |
Traip | mmu-miR-504 | beg:190 | end:207 | pic:3' CTATCTCACGTCTG-GTCCCAGA 5'& ||| ||||||.| &5' ---------CAGTTGCAGGGTTT 3' |
Traip | mmu-miR-511 | beg:402 | end:424 | pic:3' ACTCACGTCTCG-TTTTCCGTA 5'& |||.| ||||||||| &5' ---GTGTAAAATAAAAAGGCAT 3' |
Traip | mmu-miR-540-3p | beg:429 | end:445 | pic:3' GGTCCTAGCTGGAGACTGGA 5'& |.||| |||||.|. &5' CTAGG------CTCTGGCT- 3' |
Traip | mmu-miR-544 | beg:180 | end:205 | pic:3' CTCGAACGATTTTT-ACGTCTTA 5'& |.|| || |||||..| &5' GGGCCTACTTCCAGTTGCAGGGT 3' |
Traip | mmu-miR-615-5p | beg:301 | end:321 | pic:3' CTAGGCTCG--TGGCC-CCTGGGGG 5'& || .|.|| ||||||. &5' -------GCAGGCTGGAGGACCCT- 3' |
Traip | mmu-miR-615-5p | beg:282 | end:302 | pic:3' CTAGGCTCGTGGCC-CCTGGGGG 5'& ||| |.|| |||.||. &5' -----GAGTGCTGGAGGATCCT- 3' |
Traip | mmu-miR-666-3p | beg:550 | end:568 | pic:3' TCGTCCGCTAGTGCGACGTCGG 5'& ||| .| ||||||.| &5' ----GGCA---GCCCTGCAGTC 3' |
Traip | mmu-miR-666-5p | beg:320 | end:341 | pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |||. || ||||.|| &5' -GCTTGAACTCC--TGCCTGC- 3' |
Traip | mmu-miR-672 | beg:452 | end:469 | pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& |||| |||||.| &5' ---------GTACCAAAACCTTA 3' |
Traip | mmu-miR-680 | beg:80 | end:103 | pic:3' GGGGGTACAG--TCG-TCTACGGG 5'& ||| ||| || |||||||| &5' ---CCA-GTCCAAGAGAGATGCCC 3' |
Traip | mmu-miR-682 | beg:429 | end:448 | pic:3' GTCTGAAGTGACACTGACGTC 5'& || .|| ||.|||.| &5' ----CTAGGCTCTGGCTGTA- 3' |
Traip | mmu-miR-691 | beg:791 | end:808 | pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& || ||. |||||| &5' -------CCACTTGCCAGGAA- 3' |
Traip | mmu-miR-696 | beg:603 | end:619 | pic:3' GGGTGTCGTTCGTGTGCG 5'& .| ||||||||||| &5' -TC-CAGCAAGCACA--- 3' |
Traip | mmu-miR-696 | beg:594 | end:619 | pic:3' GGGT--------GTCGTTCGTGTGCG 5'& |||| ||||||||||| &5' CCCAGTGAGTTCCAGCAAGCACA--- 3' |
Traip | mmu-miR-703 | beg:187 | end:208 | pic:3' AAGAAAGGAAGAC-TTCCAAAA 5'& |||| .|| |.|||||| &5' ----TTCCAGTTGCAGGGTTTT 3' |
Traip | mmu-miR-704 | beg:934 | end:954 | pic:3' GATCCTCGT-CTCGTGTACAGA 5'& .|| | | .||||||| &5' -----GGCCTGTGGGCATGTCT 3' |
Traip | mmu-miR-708 | beg:58 | end:76 | pic:3' GGGTCGATCTAACATTCGAGGAA 5'& .|.|| .|||||| &5' -----TTGGAAGAT-GGCTCCT- 3' |
Traip | mmu-miR-744 | beg:117 | end:138 | pic:3' ACGACAATCGGGAT-CGGGGCGT 5'& ||| ||. ||||.||| &5' ---TGTGTTCACTGCGCCCTGCA 3' |
Traip | mmu-miR-744 | beg:549 | end:565 | pic:3' ACGACAATCGGGATCGGGGCGT 5'& |.|| |||||.||| &5' ------TGGC---AGCCCTGCA 3' |
Traip | mmu-miR-764-5p | beg:1042 | end:1054 | pic:3' TCCTCCTGTAC-ACTCGTGG 5'& | ||||||| &5' ----------GCTGAGCAC- 3' |
Traip | mmu-miR-764-5p | beg:934 | end:950 | pic:3' TCCTCCTGTACACTCGTGG 5'& |.| ||||.|||. &5' -----GGCCTGTGGGCAT- 3' |
Traip | mmu-miR-7a | beg:408 | end:435 | pic:3' TGTTGTTTTA--GT-GATCAGAAGGT 5'& ||.|||| || || |||||.| &5' --AATAAAAAGGCATCTTTTCTTCTA 3' |
Traip | mmu-miR-7b | beg:252 | end:276 | pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||||...||||| ||.| &5' --AACAGGGTCACATTGACTCTA 3' |
Traip | mmu-miR-873 | beg:736 | end:757 | pic:3' TCCTCTGAGTGTTC-AAGGACG 5'& ||||| ||||| .| |||| &5' AGGAG-CTCACTGGCTTCC--- 3' |
Traip | mmu-miR-874 | beg:512 | end:534 | pic:3' AGCC-AGGGAGCCCGGTCCCGTC 5'& |.|| ||.||| |||||||| &5' TTGGCTCTCTC---CCAGGGCA- 3' |
Traip | mmu-miR-876-3p | beg:707 | end:725 | pic:3' ACTTAATGAAACATTTGGTGAT 5'& || .| |||.||||| &5' -GATG-GCC---TAAGCCACT- 3' |
Traip | mmu-miR-877star | beg:301 | end:318 | pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& | ||| .|||||| &5' -----GCAGGCT--GGAGGAC- 3' |
Traip | mmu-miR-882 | beg:509 | end:527 | pic:3' TGATTACGCGATTGAGAGAGGA 5'& || .|..|||||||| &5' ------GCATTGGCTCTCTCC- 3' |
Traip | mmu-miR-883a-5p | beg:867 | end:887 | pic:3' CATTGACGATGAAGAGAGTCGT 5'& |.|.|| .| ||||||| &5' -TGATTG--GCAA--CTCAGCA 3' |
Traip | mmu-miR-93star | beg:165 | end:183 | pic:3' GCCCTTCACGATCG-AGTCGTCA 5'& ||.| ||||||| &5' -------TGTTCCGATCAGCAG- 3' |