DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004527 mmu-miR-124* 228545 Vps18 uaguuccaggcgacaCUUGUGc |||||| aagaggggaaaaaaaGAACACg 2 8 174 195 [mm9:2:119120789-119120810:+] 0.5039 120 6 -15.72 -0.1664 MIMAT0004529 mmu-miR-125b* 228545 Vps18 uccAGGGUUCUU--GGAC-UGAACa | ||:: || |||| ||||| cguUGCCGGUAAUCCCUGCACUUGg 2 20 61 85 [mm9:2:119120676-119120700:+] 0.5003 122 0 -16.55 -0.2299 MIMAT0004534 mmu-miR-145* 228545 Vps18 guUCUUGUCAUAAAGGUCCUUa | |||| :|| |||||| acAAAACAAAGUUAGCAGGAAa 2 21 150 171 [mm9:2:119120765-119120786:+] 0.5021 132 6 -13.15 -0.1012 MIMAT0004541 mmu-miR-188-3p 228545 Vps18 acgUUUGGGACGUACACC-CUc |:| : |||||||| || gggAGAGUGGGCAUGUGGAGAu 2 19 405 426 [mm9:2:119123760-119123781:+] 0.5443 122 0 -20.73 -0.2158 MIMAT0004572 mmu-miR-290-3p 228545 Vps18 cccgaauuuugauccgCCGUGAAa ||||||| aagcaggcagacccuaGGCACUUg 2 9 379 402 [mm9:2:119123734-119123757:+] 0.5443 140 7 -15.58 -0.2232 MIMAT0000370 mmu-miR-292-3p 228545 Vps18 ugugaGUUUUGGACCGCCGUGAAa ||:| ||| ||||||| gcaggCAGACCCU--AGGCACUUg 2 20 381 402 [mm9:2:119123736-119123757:+] 0.5443 152 7 -20.50 -0.2212 MIMAT0004580 mmu-miR-34c* 228545 Vps18 ggaccgacacaccaAUCACUaa |||||| uccccuuauaauuaUAGUGAaa 3 9 456 477 [mm9:2:119121071-119121092:+] 0.5004 120 0 -6.53 -0.1576 MIMAT0004581 mmu-miR-34b-3p 228545 Vps18 cuaccgucaccucaAUCACUaa |||||| uccccuuauaauuaUAGUGAaa 3 9 456 477 [mm9:2:119121071-119121092:+] 0.5004 120 0 -5.54 -0.1576 MIMAT0004583 mmu-miR-130b* 228545 Vps18 ucaUCACGUUGUCC--CUUUCUCa :|||| ||| ||||||| uugGGUGCUUAAGGCAGAAAGAGc 2 20 82 105 [mm9:2:119120697-119120720:+] 0.5003 154 7 -19.71 -0.2834 MIMAT0004583 mmu-miR-130b* 228545 Vps18 ucaucacguUGUCCCUUUCUca |:|| |||||| cuuauaauuAUAGUGAAAGAaa 3 14 460 481 [mm9:2:119121075-119121096:+] 0.5004 133 0 -8.24 -0.1957 MIMAT0004622 mmu-let-7c-1* 228545 Vps18 ccuuUCGAUCUUC--CAACAUGUc || |||||| ||||||| cgguAGGUAGAAGCACUUGUACAa 2 19 324 347 [mm9:2:119120939-119120962:+] 0.5005 161 7 -18.34 -0.3402 MIMAT0004630 mmu-miR-26b* 228545 Vps18 cucggUUCAUUACCUCUUGUcc ::| || |||||| aagagGGGAAAAAAAGAACAcg 3 18 174 195 [mm9:2:119120789-119120810:+] 0.5039 125 0 -10.40 -0.1331 MIMAT0004630 mmu-miR-26b* 228545 Vps18 cucGGUUCAUUACC---UCUUGUCc |||||| :||| ||||||| gcaCCAAGU-GUGGAAUAGAACAGg 2 20 613 636 [mm9:2:119123968-119123991:+] 0.5217 160 7 -28.02 -0.1630 MIMAT0000551 mmu-miR-323-3p 228545 Vps18 ucuccagcuggcaCAUUACAc ||||||| agaauuugugaagGUAAUGUu 2 9 494 514 [mm9:2:119121109-119121129:+] 0.5003 140 7 -10.02 -0.8485 MIMAT0000578 mmu-miR-337-3p 228545 Vps18 uccguaguauaucCUCGACUu ||||||| aguucuguccccaGAGCUGAu 2 9 361 381 [mm9:2:119120976-119120996:+] 0.5006 140 7 -10.79 -0.4377 MIMAT0000605 mmu-miR-350 228545 Vps18 cuuucacauacccgAAACACUu ||||||| ucauuuuaaaagaaUUUGUGAa 2 9 484 505 [mm9:2:119121099-119121120:+] 0.5003 140 7 -8.46 -1.2363 MIMAT0004659 mmu-miR-10a* 228545 Vps18 auaaggggaUC-UAUGCUUAAac || | ||||||| gggaaaaaaAGAACACGAAUUaa 3 14 179 201 [mm9:2:119120794-119120816:+] 0.5039 128 0 -7.87 -0.1485 MIMAT0004660 mmu-miR-19a* 228545 Vps18 caucacGUUGAUACGUUUUGau ||| | |||||| uaaaaaCAA-AAAACAAAACaa 3 17 138 158 [mm9:2:119120753-119120773:+] 0.5021 122 0 -5.93 -0.1053 MIMAT0004670 mmu-miR-7a* 228545 Vps18 auaccgucugacacUAAACAac |||||| aucauuuuaaaagaAUUUGUga 3 9 483 504 [mm9:2:119121098-119121119:+] 0.5003 120 0 -6.75 -0.1407 MIMAT0000745 mmu-miR-380-3p 228545 Vps18 uucuACACCUGGUAUGAUGUAu | | ||| ||||||| auccUUUUAACC--ACUACAUc 2 19 228 247 [mm9:2:119123583-119123602:+] 0.5443 143 7 -9.49 -0.4193 MIMAT0001094 mmu-miR-412 228545 Vps18 gcCGAUCAC-CUGGUC--CACUu |||:||| ||:||| |||| gaGCUGGUGAGAUCAGCCGUGAu 2 19 207 229 [mm9:2:119123562-119123584:+] 0.5440 121 0 -23.89 -0.2979 MIMAT0003409 mmu-miR-467a 228545 Vps18 gcGUAUAUGUACG-UCCGUGAAu || : | | | |||||||| agCAGGCAGACCCUAGGCACUUg 2 21 380 402 [mm9:2:119123735-119123757:+] 0.5443 147 7 -20.05 -0.2253 MIMAT0004782 mmu-miR-483 228545 Vps18 gagggaagagaAGAGGGCAGAa || ||||||| aacaccgugagUC-CCCGUCUu 2 12 117 137 [mm9:2:119120732-119120752:+] 0.5003 141 7 -19.95 -0.5379 MIMAT0003170 mmu-miR-541 228545 Vps18 ucacaCUGGUUGUAGUC-UUAGGGAa | :|: :: |:| ||||||| ugcaaGCUCGUUGCCGGUAAUCCCUg 2 21 53 78 [mm9:2:119120668-119120693:+] 0.4916 147 7 -16.29 -0.1346 MIMAT0003376 mmu-miR-302c 228545 Vps18 ggUGA-CUUUGUACCUUCGUGAa :|| |: | :| |||||||| ugGCUCGGUAGGUAGAAGCACUu 2 21 319 341 [mm9:2:119120934-119120956:+] 0.5005 155 7 -15.93 -0.2980 MIMAT0004820 mmu-miR-744* 228545 Vps18 uccaacUCCAAUCACCGUUGUc || ||| ||||||| gagcacAGUUUA--GGCAACAc 2 17 102 121 [mm9:2:119120717-119120736:+] 0.5003 149 7 -12.42 -0.4153 MIMAT0004822 mmu-miR-770-5p 228545 Vps18 gcacCGGGUCUGUGCACCACGa ||: || :: ||||||| cucaGCUGAGUUG-GUGGUGCa 2 19 36 56 [mm9:2:119120651-119120671:+] 0.4828 148 7 -17.46 -0.2145 MIMAT0015219 mmu-miR-3475 228545 Vps18 aaGUUUGGUACACGGAGGUCu ||: |: || ||||||| caCAGCCUCUGGACCUCCAGc 2 20 322 342 [mm9:2:119123677-119123697:+] 0.5443 155 7 -19.96 -0.1656 MIMAT0003735 mmu-miR-672 228545 Vps18 agUGUGUGUC-AUGUGGU-UGGAGu :||| | | |:|| || ||||| caGCACUCCGAUGCA-CACACCUCc 2 22 430 453 [mm9:2:119121045-119121068:+] 0.5006 122 0 -20.80 -0.2051 MIMAT0003896 mmu-miR-763 228545 Vps18 cgGUGAC-CAAGA-AGGGUC-GACc || || ||||| |||| ||| caCAGUGAGUUCUAGGCCAGCCUGg 2 21 562 586 [mm9:2:119121177-119121201:+] 0.5002 122 0 -24.53 -0.2953 MIMAT0003896 mmu-miR-763 228545 Vps18 cggugaccaagaaGGGUCGACc :||||||| ggacagacauggaUCCAGCUGc 2 10 20 41 [mm9:2:119123375-119123396:+] 0.5122 141 7 -17.76 -0.1254 MIMAT0003739 mmu-miR-673-5p 228545 Vps18 gagguucCUGGUCUCGACACUc || || ||||||| ------aGAGAAGUGCUGUGAg 2 16 1 16 [mm9:2:119120616-119120631:+] 0.4728 151 7 -19.29 -0.1661 MIMAT0003739 mmu-miR-673-5p 228545 Vps18 gaGGUUCCU-GGUCUCGA-CACUc |||:| | || ||||| |||| ucCCAGGCAGCCCGAGCUGGUGAg 2 21 194 217 [mm9:2:119123549-119123572:+] 0.5437 135 0 -26.58 -0.1258 MIMAT0003466 mmu-miR-687 228545 Vps18 aguaACGACGU--AAGGUCCUAUc ||||| | | ||||||| uugaUGCUGAAGCUAACAGGAUAu 2 19 550 573 [mm9:2:119123905-119123928:+] 0.5443 153 7 -16.88 -0.7250 MIMAT0003470 mmu-miR-691 228545 Vps18 aaaagacggagagaaGUCCUUa |||||| acaaaacaaaguuagCAGGAAa 2 8 150 171 [mm9:2:119120765-119120786:+] 0.5021 120 6 -8.25 -0.1065 MIMAT0003472 mmu-miR-693-5p 228545 Vps18 cuUUUGA--AAGCCUA-CACCGAc :||:| | | ||| |||||| auGAAUUAGUACUGAUAGUGGCUa 2 20 538 561 [mm9:2:119121153-119121176:+] 0.5002 122 6 -11.41 -0.8202 MIMAT0003476 mmu-miR-669b 228545 Vps18 uguacguguacgUGUGUUUUGa | ||||||| uuuaaaaacaaaAAACAAAACa 2 11 136 157 [mm9:2:119120751-119120772:+] 0.5021 142 7 -7.67 -1.2315 MIMAT0003484 mmu-miR-720 228545 Vps18 accUCCGGGGUCGCUCUa | | ||||||||| guaAUGAGCCAGCGAGAu 2 16 302 319 [mm9:2:119120917-119120934:+] 0.5022 151 7 -20.63 -0.1662 MIMAT0003742 mmu-miR-455 228545 Vps18 caCAUAUACGGGCACCUGACg | ||:| | | ||||||| caGCAUGUUCACCUGGACUGa 2 20 269 289 [mm9:2:119123624-119123644:+] 0.5443 159 7 -17.62 -0.1285 MIMAT0003490 mmu-miR-700 228545 Vps18 ccaccugagcCAA--GGGCGCAc ||| ||||||| -------gaaGUUCCCCCGCGUg 2 12 1 16 [mm9:2:119123356-119123371:+] 0.6651 142 7 -19.14 -0.6675 MIMAT0003490 mmu-miR-700 228545 Vps18 ccACCUGAGCCA-AGGGCG-CAc |||||| || ||||| || ccUGGACUGAGUGGCCCGCUGUc 2 20 280 302 [mm9:2:119123635-119123657:+] 0.5443 126 0 -23.30 -0.1310 MIMAT0003499 mmu-miR-709 228545 Vps18 agGAGGACGGAGACGGAGg | || |:|||||||| cuCGCCCUCUUCUGCCUCa 2 18 342 360 [mm9:2:119123697-119123715:+] 0.5443 157 7 -24.22 -0.6511 MIMAT0003502 mmu-miR-712 228545 Vps18 ccauggcgggccCACUUCCuc ||||||| uuaaaagaauuuGUGAAGGua 3 10 489 509 [mm9:2:119121104-119121124:+] 0.5003 125 0 -11.83 -0.1936 MIMAT0003508 mmu-miR-501-5p 228545 Vps18 aaaguGGGUCCCUGUUUCCUAa |||| | ||||||| augauCCCA---AGAAAGGAUg 2 18 572 590 [mm9:2:119123927-119123945:+] 0.5443 145 7 -13.14 -0.1903 MIMAT0004237 mmu-miR-742 228545 Vps18 aaauggguCGUACCACCGAAAg |||| ||||||| ugggguuuGCAUUCUGGCUUUg 2 15 211 232 [mm9:2:119120826-119120847:+] 0.5039 154 7 -13.03 -0.1472 MIMAT0004237 mmu-miR-742 228545 Vps18 aaauGGGUC-GUACCACCGAAAg ||::| | || ||||||| uggcCCUGGACUUGAUGGCUUUg 2 19 525 547 [mm9:2:119123880-119123902:+] 0.5443 157 7 -17.60 -0.7044 MIMAT0004846 mmu-miR-881 228545 Vps18 agAUAAGUCUUUUC--UGUGUCAa || | | |: :| ||||||| agUACUGAUAGUGGCUACACAGUg 2 21 545 568 [mm9:2:119121160-119121183:+] 0.5002 147 7 -13.23 -0.2206 MIMAT0004848 mmu-miR-883a-5p 228545 Vps18 caUUGACGAUG-AAGAG-AGUCGu |::| || : ||||| ||||| acAGUUCCUCUGUUCUCGUCAGCa 2 21 250 273 [mm9:2:119123605-119123628:+] 0.5443 127 0 -20.08 -0.6693 MIMAT0004856 mmu-miR-105 228545 Vps18 ugGUGUUCG-UAGACUCGUGAACc ::| :|: ||| ||||||| guUGCCGGUAAUCCCUGCACUUGg 2 22 62 85 [mm9:2:119120677-119120700:+] 0.5003 148 7 -20.55 -0.1994 MIMAT0004856 mmu-miR-105 228545 Vps18 ugguguucguagacUCGUGAACc |||||||| gcucgguagguagaAGCACUUGu 2 10 321 343 [mm9:2:119120936-119120958:+] 0.5005 145 7 -17.79 -0.5622 MIMAT0004856 mmu-miR-105 228545 Vps18 uggUGUUCGU---AGACUCGUGAACc :||:||| || :||||||| caaGCAGGCAGACCCUAGGCACUUGu 2 21 378 403 [mm9:2:119123733-119123758:+] 0.5443 155 7 -21.87 -0.1307 MIMAT0004884 mmu-miR-466h 228545 Vps18 auGUGUGUUCGUG----UACGUGUGu ||::| ||||| |||||||| cuCAUGC-AGCACUCCGAUGCACACa 2 21 424 448 [mm9:2:119121039-119121063:+] 0.5006 157 7 -23.28 -0.3704 MIMAT0004893 mmu-miR-574-5p 228545 Vps18 ugUGUGAGUGUGUGUGUGU-GAGu :||||| |::|||||| ||| caGCACUCCGAUGCACACACCUCc 2 22 430 453 [mm9:2:119121045-119121068:+] 0.5006 141 0 -24.15 -0.2182 MIMAT0004898 mmu-miR-654-3p 228545 Vps18 uucCACUACCAGUCGUCUGUAu ||| ||| : ||||||| cgcGUG--GGUGGACAGACAUg 2 20 11 30 [mm9:2:119123366-119123385:+] 0.5887 152 7 -18.29 -0.5612 MIMAT0004930 mmu-miR-466d-5p 228545 Vps18 guacauguacaUGCGUGUGUGu |:|||||||| gcagcacuccgAUGCACACACc 2 12 429 450 [mm9:2:119121044-119121065:+] 0.5006 151 7 -18.71 -0.2079 MIMAT0004940 mmu-miR-511 228545 Vps18 acUCACG--UCUCGU-UUUC-CGUa :|||| | :||| |||| ||| ugGGUGCUUAAGGCAGAAAGAGCAc 2 20 83 107 [mm9:2:119120698-119120722:+] 0.5003 121 0 -18.23 -0.3412 MIMAT0005836 mmu-miR-1186 228545 Vps18 guACGGAAAUUAAGGUCGUGAg || | | | | ||||||| ccUGACCCUCA-UGCAGCACUc 2 21 417 437 [mm9:2:119121032-119121052:+] 0.5006 146 7 -16.64 -0.1101 MIMAT0005845 mmu-miR-466k 228545 Vps18 aguGUACAU-GU-A--C-AUGUGUGUGu |||| | || | | |:||||||| ccuCAUGCAGCACUCCGAUGCACACACc 2 21 423 450 [mm9:2:119121038-119121065:+] 0.5006 148 7 -15.83 -0.2059 MIMAT0005847 mmu-miR-1190 228545 Vps18 cuGUCUCC--CCUUG-----GAGUCGACu |||||| | ||| |||||||| ggCAGAGGCUGAAACUCAGACUCAGCUGa 2 21 16 44 [mm9:2:119120631-119120659:+] 0.4828 154 7 -31.90 -0.1063 MIMAT0005848 mmu-miR-466j 228545 Vps18 aauGUGUGUACGUG----UACGUGUGu ||::|| |||| |||||||| ccuCAUGCA-GCACUCCGAUGCACACa 2 21 423 448 [mm9:2:119121038-119121063:+] 0.5006 157 7 -23.28 -0.3704 MIMAT0005851 mmu-miR-1193 228545 Vps18 cuaucauuuugccCACUGGAu ||||||| uggagaugcuaauGUGACCUg 2 9 420 440 [mm9:2:119123775-119123795:+] 0.5443 140 7 -15.44 -0.1522 MIMAT0005860 mmu-miR-1199 228545 Vps18 ggcgcgcUGGCCCUGAGUCu ||: ||||||| ggcugaaACUCAGACUCAGc 2 14 22 41 [mm9:2:119120637-119120656:+] 0.4828 145 7 -16.53 -0.3300 MIMAT0007868 mmu-miR-1903 228545 Vps18 acagaguccUUCUUCUUCUUCc || ||||||||| aauaaaaauAAAAAGAAGAAGu 2 14 714 735 [mm9:2:119124069-119124090:+] 0.4996 157 7 -11.50 -1.0006 MIMAT0007872 mmu-miR-1906 228545 Vps18 ucgggACGGAG----UCCGAC-GACGu |||| | |||||| |||| uggaaUGCCACAAGAAGGCUGCCUGCa 2 18 589 615 [mm9:2:119123944-119123970:+] 0.5443 120 0 -24.12 -0.2221 MIMAT0007877 mmu-miR-1894-5p 228545 Vps18 ucUCCGUCCACCAUCCCCUCUc ||||| | || ||||||| cuAGGCA-CUUGU-GGGGAGAg 2 21 392 411 [mm9:2:119123747-119123766:+] 0.5443 156 7 -25.77 -0.1209 MIMAT0009426 mmu-miR-1955 228545 Vps18 uuUUCGACGUCACGU-AGGACCCUGa |:|||| || ||| |||||||| ugAGGCUG-AGGGCACACCUGGGACa 2 24 462 486 [mm9:2:119123817-119123841:+] 0.5443 172 7 -30.71 -0.2394 MIMAT0009428 mmu-miR-1956 228545 Vps18 agGCGA-CUGA--GUCGGGACCUGa |||| | | ::||||||||| caCGCUACAAUGGUGGCCCUGGACu 2 21 512 536 [mm9:2:119123867-119123891:+] 0.5443 154 7 -28.07 -0.2118 MIMAT0009428 mmu-miR-1956 228545 Vps18 aggCGACUGAGUCGGGACCUGa || ::||| ||||||| ucaGCAUGUUCA--CCUGGACu 2 20 268 287 [mm9:2:119123623-119123642:+] 0.5443 148 7 -20.51 -0.2807 MIMAT0009435 mmu-miR-1962 228545 Vps18 uacaCAGGGUCACG-GUCGGAGa ||||: | | ||||||| cuccGUCCU--UCCACAGCCUCu 2 19 311 331 [mm9:2:119123666-119123686:+] 0.5443 146 7 -22.50 -0.1956 MIMAT0009441 mmu-miR-1968 228545 Vps18 ucagguGGUAGGAAUUGUCG-ACGu |:: |:||: |||| ||| ugcauuCUGGCUUUGCCAGCUUGCu 2 19 218 242 [mm9:2:119120833-119120857:+] 0.5039 122 0 -15.59 -0.1004 MIMAT0009441 mmu-miR-1968 228545 Vps18 ucaggUGGUAGGAAUU--GUCGACGu || : | | :| ||||||| gguggACAGACAUGGAUCCAGCUGCc 2 20 17 42 [mm9:2:119123372-119123397:+] 0.5122 142 7 -13.73 -0.1172 MIMAT0009457 mmu-miR-1839-3p 228545 Vps18 cgACAAC-CAUC-UAUUCA-UCCAGa ||| | ||| | |:|| ||||| agUGUGGAAUAGAACAGGUCAGGUCa 2 22 619 644 [mm9:2:119123974-119123999:+] 0.4993 123 0 -15.84 -0.1200 MIMAT0011210 mmu-miR-2134 228545 Vps18 cguggggcaaAGGGUUCUg |||||||| caggauaugaUCCCAAGAa 2 10 566 584 [mm9:2:119123921-119123939:+] 0.5443 145 7 -14.55 -0.9587 MIMAT0011214 mmu-miR-2138 228545 Vps18 uaaGGCGGUUCGGGCAAG-GGAa :||:| ||| :|||| ||| uucUCGUC-AGCAUGUUCACCUg 2 20 262 283 [mm9:2:119123617-119123638:+] 0.5443 125 0 -21.92 -0.1812 MIMAT0011216 mmu-miR-2140 228545 Vps18 ugGUGGUUCU-A--GACGUGGa || |||: | ||||||| caCAAGAAGGCUGCCUGCACCa 2 18 597 618 [mm9:2:119123952-119123973:+] 0.5217 143 7 -16.76 -0.2910 MIMAT0011217 mmu-miR-2141 228545 Vps18 uugaaAAGACUGUGGAGGa | | |||||||| uccgaUGCACACACCUCCc 2 15 436 454 [mm9:2:119121051-119121069:+] 0.5006 146 7 -14.31 -0.3764 MIMAT0000123 mmu-miR-1 228545 Vps18 uauGU-AUGAAGAAAUGU-AAGGu || ||| || | ||| |||| aacCACUACAUC-UAACAGUUCCu 2 20 236 258 [mm9:2:119123591-119123613:+] 0.5443 120 0 -9.88 -0.5720 MIMAT0000134 mmu-miR-124 228545 Vps18 ccGUAAGUGGCG-CACGGAAu :|| | :| | ||||||| ucUAUACCUCUCUGUGCCUUa 2 19 262 282 [mm9:2:119120877-119120897:+] 0.5039 149 7 -17.83 -0.7995 MIMAT0004528 mmu-miR-125a-3p 228545 Vps18 ccGAG-GGUUCUUGGAGUGGACa ||| :||: | :||||||| uuCUCGUCAGCAUGUUCACCUGg 2 21 262 284 [mm9:2:119123617-119123639:+] 0.5443 155 7 -20.66 -0.1733 MIMAT0000151 mmu-miR-140 228545 Vps18 gaugguaucccauuUUGGUGAc ||||||| gccgugauccuuuuAACCACUa 2 9 222 243 [mm9:2:119123577-119123598:+] 0.5443 140 7 -14.56 -1.1003 MIMAT0000156 mmu-miR-144 228545 Vps18 ucAUGUAGUA-GAUAUGACAu ||||| :| ||||||| auUACAUAGUGAGAUACUGUc 2 19 587 607 [mm9:2:119121202-119121222:+] 0.5002 153 7 -11.59 -0.1545 MIMAT0000159 mmu-miR-149 228545 Vps18 cccUCACUUCUGUGCCUCGGUCu | ||: |::| ||||||| uuaAAUGGUGGUAAUGAGCCAGc 2 21 292 314 [mm9:2:119120907-119120929:+] 0.5022 156 7 -18.65 -0.2815 MIMAT0000213 mmu-miR-184 228545 Vps18 ugGGAAUAGUCAAGAGGCAGGu ||| || | |||||||| guCCU--UCCUUCCUCCGUCCu 2 21 300 319 [mm9:2:119123655-119123674:+] 0.5443 153 7 -21.36 -0.2082 MIMAT0000216 mmu-miR-187 228545 Vps18 ggccgaCGUUGUGUUC-UGUGCu | || | ||| ||||| aagaggGGAAAAAAAGAACACGa 2 17 174 196 [mm9:2:119120789-119120811:+] 0.5039 120 0 -13.73 -1.2618 MIMAT0000235 mmu-miR-202-3p 228545 Vps18 agaaggguacgcGAUAUGGAGa ||||||||| uggggcugguuuCUAUACCUCu 2 11 251 272 [mm9:2:119120866-119120887:+] 0.5039 150 7 -17.08 -0.8229 MIMAT0000236 mmu-miR-203 228545 Vps18 gauCACCAGGAUUUGUA-AAGUg || || | |:||| |||| ucuGUUCUCGUCAGCAUGUUCAc 2 20 258 280 [mm9:2:119123613-119123635:+] 0.5443 123 0 -12.25 -0.1522 MIMAT0000238 mmu-miR-205 228545 Vps18 gucugaggccaccuUACUUCCu :|||||| uuuuaaaagaauuuGUGAAGGu 2 9 487 508 [mm9:2:119121102-119121123:+] 0.5003 124 6 -10.93 -0.2284 MIMAT0000239 mmu-miR-206 228545 Vps18 ggUGUGUGAAG--GAAUGU-AAGGu || |||| | || ||| |||| uaAC-CACUACAUCUAACAGUUCCu 2 21 235 258 [mm9:2:119123590-119123613:+] 0.5443 121 0 -17.18 -0.5756 MIMAT0000368 mmu-miR-291a-3p 228545 Vps18 cguguguUUCACCUUCGUGAAa |:|| ||||||||| gcucgguAGGUAGAAGCACUUg 2 16 321 342 [mm9:2:119120936-119120957:+] 0.5005 163 7 -19.34 -0.3652 MIMAT0000372 mmu-miR-294 228545 Vps18 ugUGUGUUUUCC--CUUCGUGAAa :| |:: ||| ||||||||| ugGCUCGGUAGGUAGAAGCACUUg 2 21 319 342 [mm9:2:119120934-119120957:+] 0.5005 159 7 -19.03 -0.3711 MIMAT0000373 mmu-miR-295 228545 Vps18 ucUGAGUU-UUCAUCAUCGUGAAa :|||:: |:|||| ||||||| ugGCUCGGUAGGUAGAAGCACUUg 2 22 319 342 [mm9:2:119120934-119120957:+] 0.5005 172 7 -25.95 -0.3652 MIMAT0004576 mmu-miR-296-3p 228545 Vps18 ccUCUCGGAGGUGGGU-UGGGAg :|||| || || ||||| caGGAGCAAGCAGGCAGACCCUa 2 21 372 394 [mm9:2:119123727-119123749:+] 0.5443 120 0 -17.83 -0.1137 MIMAT0000380 mmu-miR-302a 228545 Vps18 aguGGUUUUGUACCUUCGUGAAu :|:: | :| ||||||||| ggcUCGGUAGGUAGAAGCACUUg 2 21 320 342 [mm9:2:119120935-119120957:+] 0.5005 160 7 -18.72 -0.3711 MIMAT0000538 mmu-miR-31 228545 Vps18 guCGAUACGGUCGUAG-AACGGa |: :||| ||| || ||||| ugGUGGUGCAAGC-UCGUUGCCg 2 21 47 68 [mm9:2:119120662-119120683:+] 0.4916 126 0 -16.81 -0.1691 MIMAT0000597 mmu-miR-346 228545 Vps18 ucuccGUC--CGUGAGCCCGUCUGu ||| ||| | ||||||| ugaccCAGGAGCAAGCAGGCAGACc 2 19 367 391 [mm9:2:119123722-119123746:+] 0.5443 153 7 -20.39 -0.1572 MIMAT0000665 mmu-miR-223 228545 Vps18 accCCAUAAAC--UGUUUGACUGu |||| | : |||||||| gauGGUAGAAGGAGAAAACUGACu 2 20 379 402 [mm9:2:119120994-119121017:+] 0.5006 146 7 -16.77 -0.3137 MIMAT0000741 mmu-miR-377 228545 Vps18 uguuuuCAACGGAAACAC-ACUa | || ||||||| ||| ggacuuGAUGGCUUUGUGUUGAu 2 17 532 554 [mm9:2:119123887-119123909:+] 0.5443 128 0 -15.36 -0.3275 MIMAT0003151 mmu-miR-378 228545 Vps18 ggaagacugaggUUCAGGUCa |||||||| aauaaaaagaagAAGUCCAGa 2 10 720 740 [mm9:2:119124075-119124095:+] 0.5010 145 7 -13.29 -1.0541 MIMAT0001095 mmu-miR-370 228545 Vps18 ugguccaaGGUGGGGUCGUCCg | | ::|||||| aaacaaaaCAAAGUUAGCAGGa 2 15 148 169 [mm9:2:119120763-119120784:+] 0.5021 126 6 -14.33 -0.1602 MIMAT0001542 mmu-miR-449a 228545 Vps18 ugGUCGAUUGUUAUGU-GACGGu ||| | :|| || ||||| gaCAGACAUGGAUCCAGCUGCCa 2 21 21 43 [mm9:2:119123376-119123398:+] 0.5122 120 0 -16.74 -0.1669 MIMAT0003128 mmu-miR-485 228545 Vps18 cuuAAGUAGUGCCG-GUCGGAGa | |:|| : | ||||||| uccUCCGUCCUUCCACAGCCUCu 2 20 309 331 [mm9:2:119123664-119123686:+] 0.5443 146 7 -18.85 -0.1956 MIMAT0003184 mmu-miR-487b 228545 Vps18 uucaccUACUGGGACAUG-CUAa |||| :: |||| ||| uauaauAUGAAUUAGUACUGAUa 2 17 532 554 [mm9:2:119121147-119121169:+] 0.5002 120 0 -8.58 -0.7037 MIMAT0003374 mmu-miR-302b 228545 Vps18 gaUGA-UUUUGUACCUUCGUGAAu :|| :: | :| ||||||||| ugGCUCGGUAGGUAGAAGCACUUg 2 22 319 342 [mm9:2:119120934-119120957:+] 0.5005 156 7 -16.18 -0.3711 MIMAT0003377 mmu-miR-302d 228545 Vps18 ugUGAGUU-UGUACCUUCGUGAAu :|||:: | :| ||||||||| ugGCUCGGUAGGUAGAAGCACUUg 2 22 319 342 [mm9:2:119120934-119120957:+] 0.5005 164 7 -21.02 -0.3711 MIMAT0003729 mmu-miR-216b 228545 Vps18 agUGUAAACGGACGUCUCUAAa |:| ||::| ||||||| cuAUAAAUGUUU--AGAGAUU- 2 21 816 834 [mm9:2:119124171-119124189:+] 0.5025 149 7 -10.14 -1.0248 MIMAT0003783 mmu-miR-615-3p 228545 Vps18 uucUCCCUCUGGGUCCGAGCCu || ||||: ||||||| gccAGCGAGAU---GGCUCGGu 2 20 309 327 [mm9:2:119120924-119120942:+] 0.5005 151 7 -20.89 -0.3885 MIMAT0004855 mmu-miR-876-3p 228545 Vps18 acuuaAUGAAACAUUUGGUGAu | |||| | ||||||| cgugaUCCUUU-U-AACCACUa 2 18 224 243 [mm9:2:119123579-119123598:+] 0.5443 149 7 -14.29 -1.0691 MIMAT0004896 mmu-miR-590-3p 228545 Vps18 ugaucgaauauguaUUUUAAu |||||| agcaaaggcuagaaAAAAUUa 2 8 679 699 [mm9:2:119124034-119124054:+] 0.4996 120 6 -5.53 -0.1810 MIMAT0004896 mmu-miR-590-3p 228545 Vps18 ugaucgaauAUGUAUUUUAAu || || ||||| agaaaaaauUAAAUUAAAUUa 2 13 689 709 [mm9:2:119124044-119124064:+] 0.4996 120 0 -2.07 -0.1056

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G040673 Vps18 Mus musculus 228545

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Vps18 mmu-miR-501-5p beg:574 end:590 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& |||| | ||||||| &5' -----CCCA---AGAAAGGAT- 3' Vps18 mmu-miR-23a beg:418 end:436 pic:3' CCTTTAGGGACCGTTACACTA 5'& |||.|| |. ||||||| &5' GGAGATGCT----AATGTGA- 3' Vps18 mmu-miR-23b beg:418 end:436 pic:3' CCATTAGGGACCGTTACACTA 5'& ||.. || .||||||| &5' -GTGGAGA-TGCTAATGTGA- 3' Vps18 mmu-miR-201 beg:277 end:293 pic:3' TTCTTGTTACGGAA-TGACTCAT 5'& ||| |||||||. &5' ----------CCTGGACTGAGTG 3' Vps18 mmu-miR-127star beg:118 end:134 pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& |||| |||||||| &5' -----AGCCA----AGCTTCAG 3' Vps18 mmu-miR-654-3p beg:11 end:31 pic:3' TTCCACTACCAGTC-GTCTGTAT 5'& .||| .| |||||||. &5' ------GTGGGTGGACAGACATG 3' Vps18 mmu-miR-1962 beg:312 end:332 pic:3' TACACAGGGTCACGGTCGGAGA 5'& ||||. |||||||| &5' ----GTCCTTCCA-CAGCCTCT 3' Vps18 mmu-miR-687 beg:554 end:573 pic:3' AGTAACGACGTAAG--GTCCTATC 5'& |||| ||||||| &5' -----GCTGAAGCTAACAGGATA- 3' Vps18 mmu-miR-763 beg:24 end:41 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& || ||| .||||||| &5' --CA-TGGA----TCCAGCTG- 3' Vps18 mmu-miR-1956 beg:268 end:288 pic:3' AGGCG-ACTGAGTCGGGACCTGA 5'& || || .||| |||||||| &5' ---GCATG-TTCA--CCTGGACT 3' Vps18 mmu-miR-1956 beg:523 end:537 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& .|||||||||| &5' -----------GGCCCTGGACT 3' Vps18 mmu-miR-709 beg:344 end:360 pic:3' AGGAGGACGGAGACGGAGG 5'& ||| |.|||||||| &5' ----CCT-CTTCTGCCTC- 3' Vps18 mmu-miR-1903 beg:723 end:735 pic:3' ACAGAGTCCTTCTTCTTCTTCC 5'& ||||||||| &5' ------------AAGAAGAAG- 3' Vps18 mmu-miR-674star beg:157 end:167 pic:3' AACAAGACTCTACCCTCGACAC 5'& |||||||| &5' --------------GAGCTGTG 3' Vps18 mcmv-miR-m01-3 beg:760 end:781 pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& |||. .||| ||||||.| &5' ----GGCGTAGGTC-CTTCACTG 3' Vps18 mcmv-miR-m107-1-5p beg:276 end:296 pic:3' CCACTGAGCTCTG-CTCACTGGC 5'& || | .||| |||||.|| &5' ----AC-CTGGACTGAGTGGCC- 3' Vps18 mcmv-miR-M87-1 beg:591 end:613 pic:3' CGACGGCGACGGCTGCCGACGGA 5'& |||| | || |||||||| &5' --TGCCACAA--GAAGGCTGCCT 3' Vps18 mghv-miR-M1-3 beg:263 end:283 pic:3' TTCGC-GTTGAGGACGAGTGGAG 5'& || ||.| ||.|||||| &5' ---CGTCAGCA--TGTTCACCT- 3' Vps18 mghv-miR-M1-9 beg:418 end:437 pic:3' TTTTTCCAGGTCCGTTTACACT 5'& || || ||||||| &5' -----GGAGAT-GCTAATGTGA 3' Vps18 mmu-let-7a beg:337 end:361 pic:3' TTGATATGTTGGATGATGGAGT 5'& |.|| .| .|| ||.||||| &5' AGCTC-GCCCTCTTCTGCCTCA 3' Vps18 mmu-let-7b beg:341 end:361 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .|.| | |.| ||.||||| &5' --TCGC-CCTCTT-CTGCCTCA 3' Vps18 mmu-let-7c beg:342 end:361 pic:3' TTGGTATGTTGGATGATGGAGT 5'& .| .|| ||.||||| &5' ------GCCCTCTTCTGCCTCA 3' Vps18 mmu-let-7d beg:342 end:360 pic:3' TTGATACGTTGGATGATGGAGA 5'& || .|| ||.|||| &5' ------GCCCTCTTCTGCCTC- 3' Vps18 mmu-let-7f beg:342 end:361 pic:3' TTGATATGTTAGATGATGGAGT 5'& .| ||| ||.||||| &5' ------GCCCTCTTCTGCCTCA 3' Vps18 mmu-let-7g beg:342 end:361 pic:3' TTGACATGTTTGATGATGGAGT 5'& .| || ||.||||| &5' ------GCCCTCTTCTGCCTCA 3' Vps18 mmu-let-7i beg:342 end:361 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& || | || ||.||||| &5' ----GCCCT--CTTCTGCCTCA 3' Vps18 mmu-miR-129-5p beg:729 end:751 pic:3' CGTTCGGGTCT---GGCGTTTTTC 5'& |||.||||| |.||||. &5' --AAGTCCAGAGTCCTGCAAG--- 3' Vps18 mmu-miR-146b beg:129 end:148 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& |||| ||| .|||.||| &5' AGCCG--GGA----GGTTTTCA 3' Vps18 mmu-miR-146bstar beg:179 end:202 pic:3' TGGTCTTGACT--CAGGGATCCCG 5'& ..|||.||| ||||| ||| &5' -TTAGAGCTGCCCGTCCCA--GGC 3' Vps18 mmu-miR-146bstar beg:421 end:445 pic:3' TGGTCT-TGACT-CAG-GGATCCCG 5'& ||| .|| || |||.|||| &5' ---AGATGCTAATGTGACCTGGGGC 3' Vps18 mmu-miR-151-5p beg:527 end:550 pic:3' TGATCTGACACT--CGAGGAGCT 5'& ||.|||| ||| |||. .| &5' -CTGGACT-TGATGGCTTTGTG- 3' Vps18 mmu-miR-1839-3p beg:763 end:773 pic:3' CGACAACCATCTATTCATCCAGA 5'& ||||||| &5' ---------------GTAGGTC- 3' Vps18 mmu-miR-1839-5p beg:342 end:359 pic:3' GTTCTGGACAAGATAGATGGAA 5'& .|| ||| |||.||| &5' ----GCCC--TCT-TCTGCCT- 3' Vps18 mmu-miR-184 beg:248 end:265 pic:3' TGGGAATAGTCAA-GAGGCAGGT 5'& ||||| |||.||.| &5' --------CAGTTCCTCTGTTC- 3' Vps18 mmu-miR-184 beg:298 end:319 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& .|||| |||||||| &5' -TCCTTCCTTC--CTCCGTCC- 3' Vps18 mmu-miR-187 beg:12 end:32 pic:3' GGCCGACGTTGTGTTCTGTGCT 5'& .|| || .|| |||||.|. &5' -TGGGTG-GAC---AGACATGG 3' Vps18 mmu-miR-188-3p beg:382 end:408 pic:3' ACGTTTGGGA--CGT--ACACCCTC 5'& |||.||||| ||| ||||||. &5' -GCAGACCCTAGGCACTTGTGGGG- 3' Vps18 mmu-miR-1894-5p beg:391 end:412 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& ||||| || |||||||| &5' --AGGCACTTGT--GGGGAGAG 3' Vps18 mmu-miR-1929 beg:654 end:676 pic:3' GAGACGAGATATTTCAGGATCTT 5'& || ||||.||||. &5' -TCGACATAAT-AAGTTCTAGG- 3' Vps18 mmu-miR-1929 beg:163 end:186 pic:3' GAGACGAGATATTT-CAGGATCTT 5'& | |||| | |||.||||. &5' -TGTGCTTCAGACCTGTCTTAGAG 3' Vps18 mmu-miR-1935 beg:340 end:359 pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& .|||| |.||||||| &5' ------TCGCCCTCTTCTGCCT 3' Vps18 mmu-miR-1936 beg:633 end:658 pic:3' CGGTCAAGTGTC-GTCCAGTCAAT 5'& |.||| ||||.| ||| .||| &5' GTCAGGTCACGGCCAGCCTAGT-- 3' Vps18 mmu-miR-1940 beg:755 end:778 pic:3' TTGACGAGGTGGAAGAG---TCAGGAGGTA 5'& .|||| | .|||||.|| &5' ---------GCCTTGGCGTAGGTCCTTCA- 3' Vps18 mmu-miR-1943 beg:290 end:310 pic:3' AGGTCCACGGGTC-TAGGAGGGAA 5'& ||||. .||||.|||| &5' -------GCCCGCTGTCCTTCCTT 3' Vps18 mmu-miR-1955 beg:460 end:486 pic:3' TTTTCGACGTCACGTA-GGACCCTGA 5'& .|.|||| .| ||| |||||||| &5' -GAGGCTGAGG-GCACACCTGGGAC- 3' Vps18 mmu-miR-1955 beg:424 end:446 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& ||| ||| ||||||.|| &5' ----GCTAATGTGA--CCTGGGGCT 3' Vps18 mmu-miR-1958 beg:792 end:815 pic:3' TGAATG-ACGAAGGTGAAAG-GAT 5'& .||.| ||.|||| ||| ||. &5' -TTTGCTTGTTTCC---TTCTCTG 3' Vps18 mmu-miR-1961 beg:340 end:361 pic:3' AAGATT--GATGATGGAGT 5'& || || ||.||||| &5' -TCGCCCTCTTCTGCCTCA 3' Vps18 mmu-miR-196b beg:595 end:614 pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& || |||| | |..||.|||. &5' -CC-ACAAGA--AGGCTGCCTG 3' Vps18 mmu-miR-1971 beg:737 end:757 pic:3' AGAGTCGGG----TCGGAAATG 5'& ||.|| |||||||. &5' ----AGTCCTGCAAGCCTTTG- 3' Vps18 mmu-miR-1981 beg:736 end:757 pic:3' CGGTGCAGATTCGGG----TCGGAAATG 5'& .||.|| |||||||. &5' ---------GAGTCCTGCAAGCCTTTG- 3' Vps18 mmu-miR-1982.1 beg:766 end:789 pic:3' GACACCCTCTTGTA--TCCCACTCT 5'& || || .|||||||. &5' ----GGTCCTTCACTGGGGGTGAGG 3' Vps18 mmu-miR-1982.1 beg:204 end:219 pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||.| ||||||| &5' --------GAGCT---GGTGAGA 3' Vps18 mmu-miR-1982.2 beg:766 end:788 pic:3' GACACCCTCTTGTA--TCCCACT 5'& || || .|||||| &5' ----GGTCCTTCACTGGGGGTGA 3' Vps18 mmu-miR-1983 beg:351 end:370 pic:3' TCTTTTGTACGA----GGTCCACTC 5'& ||| |.|||||| &5' --------TGCCTCAACTAGGTGA- 3' Vps18 mmu-miR-208a beg:164 end:184 pic:3' TGTTCGAAAAACGAGCAGAATA 5'& |||| | .|||||| &5' ----GCTTCAGACCTGTCTTA- 3' Vps18 mmu-miR-2134 beg:573 end:584 pic:3' CGTGGGGCAAAGGGTTCTG 5'& |||||||| &5' ----------TCCCAAGA- 3' Vps18 mmu-miR-2134 beg:358 end:377 pic:3' CGTGGGGCAAAGGGTTCTG 5'& ||. || ||||.|| &5' --ACTAGGTGACCCAGGA- 3' Vps18 mmu-miR-2135 beg:321 end:339 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& | |||.| .|||||| &5' ----CAGCCTCTGGACCTC- 3' Vps18 mmu-miR-2138 beg:795 end:809 pic:3' TAAGGCGGTTCGGGCAAGGGAA 5'& ||..|||.|||| &5' ----------GCTTGTTTCCTT 3' Vps18 mmu-miR-2140 beg:594 end:618 pic:3' TGGTGG--TTCTA---GACGTGGA 5'& .|||| |||. ||||||| &5' GCCACAAGAAGGCTGCCTGCACC- 3' Vps18 mmu-miR-214star beg:774 end:795 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& ||| | ..||| ||.||||. &5' -CACTGGGGGTG-AGGCAGGT- 3' Vps18 mmu-miR-215 beg:630 end:645 pic:3' CAGACAGTTTAGTATCCAGTA 5'& ||..|| |||||| &5' ------CAGGTC--AGGTCA- 3' Vps18 mmu-miR-23a beg:607 end:626 pic:3' CCTTTAGGGACCG---TTACACTA 5'& |||| |.||||. &5' -------CCTGCACCAAGTGTGG- 3' Vps18 mmu-miR-23b beg:607 end:626 pic:3' CCATTAGGGACCG---TTACACTA 5'& |||| |.||||. &5' -------CCTGCACCAAGTGTGG- 3' Vps18 mmu-miR-23b beg:520 end:543 pic:3' CCATTAGGGACCGTTAC-ACTA 5'& |||.. |||||| || ||. &5' GGTGG-CCCTGGACTTGATGG- 3' Vps18 mmu-miR-24 beg:740 end:761 pic:3' GACAAGGACGACTT--GACTCGGT 5'& |||||| .|||||| &5' ----TCCTGCAAGCCTTTGAGCC- 3' Vps18 mmu-miR-27astar beg:738 end:763 pic:3' ACGAG-TGTTCGTCGATTCGGGA 5'& | | .||||| .|.||||.| &5' -GTCCTGCAAGCCTTTGAGCCTT 3' Vps18 mmu-miR-2861 beg:44 end:69 pic:3' GGCGGGCGG---CGGTCCGGGG 5'& || ||.|| |||||||||. &5' CCTCCTGCGAAAGCCAGGCCCT 3' Vps18 mmu-miR-29bstar beg:41 end:64 pic:3' ATTTGGT-GGTATACTTTGGTCG 5'& |.||| || ||.|||| &5' -AGACCCTCCTGCGAAAGCCAG- 3' Vps18 mmu-miR-3072star beg:299 end:320 pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& ||| .|||.|||| ||||.| &5' CCT-TCCTTCCTCC--GTCCTT 3' Vps18 mmu-miR-30bstar beg:181 end:200 pic:3' CTGCATTTGTAGGTGTAGGGTC 5'& .|.| || |.|||||| &5' -----GAGCTGCC-CGTCCCAG 3' Vps18 mmu-miR-30bstar beg:561 end:581 pic:3' CTGCATTTGTAG-GTG-TAGGGTC 5'& |||| .|. |||||| &5' ------AACAGGATATGATCCCA- 3' Vps18 mmu-miR-326 beg:725 end:742 pic:3' TGACCTCCTTCC-CGGGTCTCC 5'& |||| |.|||||| &5' -------GAAGAAGTCCAGAG- 3' Vps18 mmu-miR-346 beg:370 end:390 pic:3' TCTCCGTCCGTGAGCCCGTCTGT 5'& ||| ||| | ||||||| &5' --AGGA--GCAAGCAGGCAGAC- 3' Vps18 mmu-miR-3475 beg:319 end:342 pic:3' AAGT-TTGGT-ACACGGAGGTCT 5'& || |.|| || ||||||| &5' --CACAGCCTCTGGACCTCCAG- 3' Vps18 mmu-miR-423-5p beg:285 end:307 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& .||| || | |||.||.|| &5' -GAGTG--GCCCGCTGTCCTTC- 3' Vps18 mmu-miR-450b-3p beg:563 end:582 pic:3' TACGTACGTTTT--ACAAGGGTTA 5'& ||..| || |||||| &5' -------CAGGATATGATCCCAA- 3' Vps18 mmu-miR-450b-5p beg:734 end:750 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& ||| .| ||||||. &5' ----CAGA---GTCCTGCAAG- 3' Vps18 mmu-miR-452 beg:731 end:752 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& ||| ||| ||| |||||.| &5' GTC-CAGAGTCC--TGCAAGC- 3' Vps18 mmu-miR-453 beg:195 end:206 pic:3' ACGTTCGAGTGATACTCCGTTGGA 5'& |||||.|| &5' ---------------AGGCAGCC- 3' Vps18 mmu-miR-465b-3p beg:55 end:73 pic:3' AGATGAATCTTTCCGGGACTAG 5'& || ||||||||.|. &5' -------AGCCAGGCCCTGGTT 3' Vps18 mmu-miR-485 beg:638 end:655 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& .||||||||||||| &5' ------GTCACGGCCAGCCT-- 3' Vps18 mmu-miR-488 beg:219 end:238 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& .||. || |||||.|| &5' -GCCGTGAT----CCTTTTAA 3' Vps18 mmu-miR-540-3p beg:799 end:818 pic:3' GGTCCTAGCTGGAGACTGGA 5'& | || .|||||||. &5' ---GTTTCCTTCTCTGACT- 3' Vps18 mmu-miR-666-5p beg:176 end:195 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |||.| ||| ||||||. &5' ---TCTTAGAGC--TGCCCGT- 3' Vps18 mmu-miR-668 beg:278 end:295 pic:3' CCATCACCCGGCTCGGCTCACTGT 5'& |.| |.|||||.| &5' ---------CTGGACTGAGTGGC- 3' Vps18 mmu-miR-669e beg:558 end:573 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& || |||.||.| &5' --------GCTA--ACAGGATA 3' Vps18 mmu-miR-671-5p beg:308 end:332 pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& |||| |.||.|||| || ||. &5' CTCC-GTCCTTCCACAGCCTCT- 3' Vps18 mmu-miR-673-3p beg:512 end:535 pic:3' CCACG-TGTCTTGAGTCGGGGCCT 5'& || ||| ..||||.||| &5' ---GCTACAATGG-TGGCCCTGGA 3' Vps18 mmu-miR-680 beg:413 end:430 pic:3' GGGGGTACAGTCGTCTACGGG 5'& ||||| .| ||||||. &5' ----CATGT-GG-AGATGCT- 3' Vps18 mmu-miR-681 beg:447 end:470 pic:3' TCGACGG---ACGGTCGCTCCGAC 5'& ||.| |||| .||||||| &5' ---TGTCGGGTGCCC-TGAGGCTG 3' Vps18 mmu-miR-684 beg:480 end:496 pic:3' AACTGAACTTCCCTTTTGA 5'& ||| |||||.|||. &5' --GAC---AAGGGGAAAT- 3' Vps18 mmu-miR-686 beg:770 end:793 pic:3' AGAAGTGGCAGACC-CTTCGTTA 5'& ||||||.| || ||.|||. &5' -CTTCACTGGG-GGTGAGGCAG- 3' Vps18 mmu-miR-693-3p beg:592 end:611 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& |||||| |||.||||| &5' -----GCCACAA--GAAGGCTGC 3' Vps18 mmu-miR-693-3p beg:169 end:191 pic:3' AATGTC-GGTGTAGACTTTCGACG 5'& ||| || ..||| |.|||||| &5' ---CAGACC-TGTCTTAGAGCTGC 3' Vps18 mmu-miR-694 beg:126 end:148 pic:3' GAAGTC--CGTTGTAAAAGTC 5'& |||||| | .| .||||||| &5' CTTCAGCCGGGAGGTTTTCAG 3' Vps18 mmu-miR-702 beg:399 end:418 pic:3' CTCGCCCCATTTCCCACCCGT 5'& |.|||| || ||||||| &5' --GTGGGG---AGAGTGGGCA 3' Vps18 mmu-miR-703 beg:125 end:146 pic:3' AAGAAA--GGAAGACTTCCAAAA 5'& ||| || |.||||||| &5' --CTTCAGCCG---GGAGGTTTT 3' Vps18 mmu-miR-710 beg:525 end:539 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& ||| .|||||| &5' ----------CCCTGGACTTG- 3' Vps18 mmu-miR-742 beg:524 end:547 pic:3' AAATGGG-TCGT-ACCACCGAAAG 5'& .||| .| || ||||||| &5' ---GCCCTGGACTTGATGGCTTT- 3' Vps18 mmu-miR-760 beg:191 end:212 pic:3' AGGGG-TGTCTGGGTCTCGGC 5'& |||| .||| ||| ||||.| &5' TCCCAGGCAG-CCC-GAGCTG 3' Vps18 mmu-miR-804 beg:141 end:164 pic:3' AGGTCCACTCCTTGTTGAGTGT 5'& |.|||||| ||||. | .| &5' TTCAGGTGC-GAACGCCGAGC- 3' Vps18 mmu-miR-874 beg:456 end:476 pic:3' AGCCAGGGAGCCCGG-TCCCGTC 5'& |||| |||. |||||| &5' -----CCCTGAGGCTGAGGGCA- 3' Vps18 mmu-miR-875-3p beg:129 end:150 pic:3' GTATCGGAGTCATAAAAGTCC 5'& |||| .|||||||| &5' ---AGCCGGGAGGTTTTCAGG 3' Vps18 mmu-miR-876-3p beg:223 end:244 pic:3' ACTTAATGAAACATTTGGTGAT 5'& ||| |||| |||||||| &5' TGATC--CTTTT--AACCACTA 3' Vps18 mmu-miR-876-5p beg:724 end:739 pic:3' ATCACTAAGTGTC-TCTTTAGGT 5'& || ||||.|||| &5' -----------AGAAGAAGTCCA 3' Vps18 mmu-miR-877 beg:339 end:357 pic:3' GGGACGCGGTAGAGGAGATG 5'& || |||| |||.|||.| &5' --CT-CGCC--CTCTTCTGC 3' Vps18 mmu-miR-878-5p beg:349 end:369 pic:3' ACAGAACTGTAGGTTGATCTAT 5'& ||| .|||||||.|. &5' --TCTGCC---TCAACTAGGTG 3' Vps18 mmu-miR-879 beg:735 end:756 pic:3' CCGAATCTC--GATATTCGGAGA 5'& |||| ||. ||||||.| &5' -----AGAGTCCTGCAAGCCTTT 3' Vps18 mmu-miR-98 beg:342 end:361 pic:3' TTGTTATGTT-GAATGATGGAGT 5'& .| ||| ||.||||| &5' ------GCCCTCTT-CTGCCTCA 3' Vps18 mmu-miR-9star beg:529 end:549 pic:3' TGAAAGCCAATAG-ATCGAAATA 5'& .|| |.|||||.| &5' -----TGGACTTGATGGCTTTGT 3' Vps18 mmu-miR-455 beg:270 end:289 pic:3' CACATATACGGGC--ACCTGACG 5'& |||..| ||||||| &5' ------ATGTTCACCTGGACTG- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Vps18 mmu-let-7b 324 362 -UUGGUGUGUUGGAU--------------GAUGGAGU- |:|| | :|||| ||:||||| CAGCCUCUGGACCUCCAGCUCGCCCUCUUCUGCCUCAA Vps18 mmu-let-7c 337 362 UUGGUAU-GUUGGAU--GAUGGAGU- ||| |: ||| ||:||||| -UCCAGCUCGCCCUCUUCUGCCUCAA Vps18 mmu-let-7e 322 340 UGAUAUGUUGGAGGA-UGGAGU |||:||||: ||||| ----CACAGCCUCUGGACCUCC Vps18 mmu-miR-103 523 559 AGUAUCGGGACA--------UGU--UACG---ACGA- :|:|||||| :| :||: |||| -GGUGGCCCUGGACUUGAUGGCUUUGUGUUGAUGCUG Vps18 mmu-miR-107 521 559 -ACUAUCGGGACA--------UGU--UACG---ACGA- ||:|:|||||| :| :||: |||| AUGGUGGCCCUGGACUUGAUGGCUUUGUGUUGAUGCUG Vps18 mmu-miR-125b 473 502 AGUGU---UCAA--UCCCAGA-GUCCCU- |||| :| |||| :||||| GCACACCUGGGACAAGGGGAAAUAGGGAG Vps18 mmu-miR-134 326 348 GGGGAGACCAGUUGGUC-AGUGU ||||||| | |||| ||:| -GCCUCUGGACCUCCAGCUCGCC Vps18 mmu-miR-140 202 223 GAUGGUAUC--CCAUUUUGGUGAC :|| || |||:|:|:|| -AGCCCGAGCUGGUGAGAUCAG-- Vps18 mmu-miR-140* 436 468 AGGCACCAAGA------------UGGGACACCAU || ||| || :||||| || ACC-UGGGGCUCCAGUGUCGGGUGCCCUGAGGC- Vps18 mmu-miR-148a 442 466 -UGUU-UCA-AGACAUCACGUGACU- :| ||| || :|||| |||| GGCUCCAGUGUCG--GGUGCCCUGAG Vps18 mmu-miR-148b 442 466 -UGUU-UCA-AGACACUACGUGACU- :| ||| || |:||| |||| GGCUCCAGUGUCG--GGUGCCCUGAG Vps18 mmu-miR-149 15 47 CCUCACU--UCUGUGCCU-------CGGUCU- |:|||: |||||:||| |||||| UGGGUGGACAGACAUGGAUCCAGCUGCCAGAC Vps18 mmu-miR-150 475 504 -GU-GACCAUGUUCCCAA----CCCUCU- || |||| ||||||| |||||| ACACCUGGGACAAGGGGAAAUAGGGAGAG Vps18 mmu-miR-181a* 514 544 CCAUGUUAGUUGCCA-----------GCUACCA :| |||:||| :||||| --CGCUA-CAAUGGUGGCCCUGGACUUGAUGGC Vps18 mmu-miR-183 432 456 GUCACUUAA----GAUGGUCACGGUAU |||| || ||||||:|: -UGUGACCUGGGGCU-CCAGUGUCGG- Vps18 mmu-miR-184 63 86 -UGGGAAUAGUCAAGAGGCAGGU :|||| :|::|| :|| |||| GGCCCUGGUUGGUGUUCGGUCCU Vps18 mmu-miR-193 437 473 -GACCCUGAA---ACA-----------UCCGG-UCAA |||||:|| ||| ||||: || CCUGGGGCUCCAGUGUCGGGUGCCCUGAGGCUGAGG- Vps18 mmu-miR-199a 755 784 -CUUGU--CCA---UCAGACUUGUGACCC- ||:| || :||| ||||||| UGAGCCUUGGCGUAGGUCCUU-CACUGGGG Vps18 mmu-miR-199b 379 408 CUUGUCCAUCA--GAUUUGUG---ACCC- |:|||| || |||::||| |||| AAGCAGGCAGACCCUAGGCACUUGUGGGG Vps18 mmu-miR-204 463 495 GUCCGUAUCCUA--------CUGUUUCCCUU- |||| |||: |||||:||||| GAGGCUGAGGGCACACCUGGGACAAGGGGAAA Vps18 mmu-miR-207 403 430 CUCCCUC-CUCUCGGU--CCUCUUCG- :||||| | |:|| ||||| || UGGGGAGAGUGGGCAUGUGGAGAUGCU Vps18 mmu-miR-208 158 185 UGUUCGAAAAACGA-------GCAGAAUA |:|||| |||| :|||||| CCGAGCUG--UGCUUCAGACCUGUCUUAG Vps18 mmu-miR-211 463 495 -UCCGUUUCCUA--------CUGUUUCCCUU- |||| :|||: |||||:||||| GAGGCUGAGGGCACACCUGGGACAAGGGGAAA Vps18 mmu-miR-212 92 121 CCGGCA------CUGAC-CUCUGACAAU- |||| ||:|| |||: |||: UGCCGGGUCUGCGAUUGUGAGGGGGUUGC Vps18 mmu-miR-214 442 471 GACGG----ACAGA-CACGGA----CGACA ||: |||| ||||| |||| -GGCUCCAGUGUCGGGUGCCCUGAGGCUGA Vps18 mmu-miR-22 768 787 UGUCAAGAAGUUGACCGUCGAA :|| |||| ||||| :|: -AGGUCCUUC-ACUGGGGGUG- Vps18 mmu-miR-24 273 293 GACAAGGACGACUUGACUCGGU ||||| |||:||||||: AUGUUCAC-CUGGACUGAGUG- Vps18 mmu-miR-25 129 156 -AGUCUGGCUCU------GUUCACGUUAC |||| |||:|| ||:||||:| UUCAG-CCGGGAGGUUUUCAGGUGCGAA- Vps18 mmu-miR-27a 418 438 -CGCCUUGAAUCGGUGACACUU |:|||: ||:| ||||| UGUGGAGAU--GCUAAUGUGAC Vps18 mmu-miR-27b 384 408 -CGUCUUGAAUCGGUGA-CACUU- ||||| | ||| |||| |||:: GGCAGACCCUAGGCACUUGUGGGG Vps18 mmu-miR-28 428 449 GAGUUAU-CU-GACACUCGAGGAA :|||: || ||| |:||||| -CUAAUGUGACCUG-GGGCUCCA- Vps18 mmu-miR-291a-3p 380 403 CCGUGUGUUUCACCUUCGUGAAA ||| :||:| |:|||||| AGCAGGCAGACCCUAGGCACUUG Vps18 mmu-miR-291b-3p 380 403 CUGUUUGUUUUACCUACGUGAAA :||::||:| |||||| AGCAGGCAGACCCUAGGCACUUG Vps18 mmu-miR-292-3p 380 403 -UGUGAGUUUUGGACCGCCGUGAA- :|| ||:| ||| ||||||| AGCAGGCAGACCCUA--GGCACUUG Vps18 mmu-miR-293 512 533 -UGUGAUGUUUGAGACGCCGUGA- ||:|||||| |:||| || CACGCUACAAUG---GUGGCCCUG Vps18 mmu-miR-294 380 420 -UGUGUGUUU--------------UCCCU-----UCGUGAAA :|| :||:| :|||| :|||: AGCAGGCAGACCCUAGGCACUUGUGGGGAGAGUGGGCAUG-- Vps18 mmu-miR-296 94 126 UGUCCUA--------ACUCCCCCC----CGGGA |:|| |||||||| ||| CCGGGUCUGCGAUUGUGAGGGGGUUGCAGCCA- Vps18 mmu-miR-298 331 359 -CCUUC---UUGU-CGGGAGGAGACGG- ||| |:| ||||||:|||||| UGGACCUCCAGCUCGCCCUCUUCUGCCU Vps18 mmu-miR-29a 131 171 -UUGGCU-----AAAGUCUAC-------------CACGAU |:|||: ||||||:|| ||||| CAGCCGGGAGGUUUUCAGGUGCGAACGCCGAGCUGUGCUU Vps18 mmu-miR-320 342 376 AAGCGGGAGAG---------------UUGGGUCGAAAA |||||||||: :|||||| CUCGCCCUCUUCUGCCUCAACUAGGUGACCCAGG---- Vps18 mmu-miR-324-3p 385 416 GGUCG-----UCGUGG--ACCCCG-UCACC- ||| :||||: ||||| ||||| GCAGACCCUAGGCACUUGUGGGGAGAGUGGG Vps18 mmu-miR-326 437 468 UGACCUCCU--------UCC-CGGGUCUCC- ||||:| :|| |||| |||| CCUGGGGCUCCAGUGUCGGGUGCCCUGAGGC Vps18 mmu-miR-330 515 550 AGAG---ACGUCCGGGACA--------CGAAACG- || || ||||||| ||||||: GCUACAAUGGUGGCCCUGGACUUGAUGGCUUUGUG Vps18 mmu-miR-331 760 787 AAGAUCCUAUCCGGG------UCCCCG- :|:| :||||:|| :||||: -CUUGGCGUAGGUCCUUCACUGGGGGUG Vps18 mmu-miR-338 532 560 AGUUGUUUUAGUG-------ACUACGACCU :|| :|| :| |||||||| -GGACUUGAUGGCUUUGUGUUGAUGCUGA- Vps18 mmu-miR-339 470 502 ACUCGA--GGACC------UCCU--GUCCCU- |:|| ||||| :||| :||||| AGGGCACACCUGGGACAAGGGGAAAUAGGGAG Vps18 mmu-miR-342 94 115 CUGCCCA--CGCUAAAGACACACUCU- ||||| ||||| ||||||: -CCGGGUCUGCGAU-----UGUGAGGG Vps18 mmu-miR-345 757 793 -CGUGACC------------UGAUCCCCAG-UCGU- || :||| |||:||||| :||| AGCCUUGGCGUAGGUCCUUCACUGGGGGUGAGGCAG Vps18 mmu-miR-346 379 412 -UC-UCCG-------UCCGUGA--GCCCGUCUGU || |||| ||||||| :||| ||| AAGCAGGCAGACCCUAGGCACUUGUGGGGAGAG- Vps18 mmu-miR-34a 24 58 -UUGUU----GGUCGAU--UCUGU---GACGGU- :||| ||||||: |||| |||| | AGACAUGGAUCCAGCUGCCAGACCCUCCUGCGAA Vps18 mmu-miR-34c 338 360 CGUUAGUCGAUUGAUGU--GACGGA- ||||| :| |||||| ----CCAGCUCGCCCUCUUCUGCCUC Vps18 mmu-miR-351 463 502 GUCCGAGUUUCCCGA--GGA--------------GUCCCU ||||| :||||| ||| :||||| GAGGCU--GAGGGCACACCUGGGACAAGGGGAAAUAGGGAG Vps18 mmu-miR-362 473 492 AAGUGUGGAUCCAAGGUUCCUAA |||||||:|| |||||: -GCACACCUGGGA--CAAGGGG- Vps18 mmu-miR-365 401 420 -UAUUCCUAAAAAUC-CCCGUAAU :|::||| || |||||| UGUGGGGAG----AGUGGGCAUG- Vps18 mmu-miR-369-5p 624 645 GCUUAUAUUGUGCCAG-CUAGA ||||| |||| |||| |:|| GGAAUAGAACA-GGUCAGGUCA Vps18 mmu-miR-370 359 388 -UUGGUCCAAGGUGGGG------UCGUCCG- |||:|||| |||| ||||||| CAACUAGGUG--ACCCAGGAGCAAGCAGGCA Vps18 mmu-miR-423 108 140 GACUCCC------------CGGAGUCUGGCUCGA |||||| ||:|||| |||:| GUGAGGGGGUUGCAGCCAAGCUUCAG-CCGGGA- Vps18 mmu-miR-424 9 43 AGGU-----------UUUGUACUUAA--CGACGAC ||: |:|||||:|| ||||| CCCGCGUGGGUGGACAGACAUGGAUCCAGCUGCC- Vps18 mmu-miR-431 742 793 -GGACGU-------------ACUG---CC-GGA------- CGUUCUGU |||||| ||:| || ||| |::||:|| UCCUGCAAGCCUUUGAGCCUUGGCGUAGGUCCUUCACUGGGGGUGAGGCAG Vps18 mmu-miR-434-5p 168 190 CCAAGUUUGGUACUCAG---CUCGA- ||||:||| ||| ||||| -CUUCAGACCU---GUCUUAGAGCUG Vps18 mmu-miR-449 337 359 UGGUCGAUUGUUAUGUGACGGU |||||| :| ||||| UCCAGCUCGCCCUCUUCUGCCU Vps18 mmu-miR-449b 337 360 -GGUCGAUCGUUACGUGACGGA- |||||| || |||||| UCCAGCUCGCCCUCUUCUGCCUC Vps18 mmu-miR-455-3p 447 471 -UCACAUA-UACGGGCAC-CUGACGUA ||||| :||||| || |:||| CAGUGUCGGGUGCCC-UGAGGCUGA-- Vps18 mmu-miR-455-5p 454 479 GCUACA----UCAGGUUUCCGUGUAU |:|| || |::|:|||||| GGGUGCCCUGAGGCUGAGGGCACAC- Vps18 mmu-miR-465-3p 50 74 AGAUGAA-UCUUUCCGGGACUAG- ||:| || ||||||||:|: CCUGCGAAAGCCAGGCCCUGGUUG Vps18 mmu-miR-467* 376 389 GUAUAUGUACGUCCGUGAAUG :|| ||||||| ----AGCAAGCAGGCAG---- Vps18 mmu-miR-483 395 426 -UGUU--CUGCCCUC---CCCU----CCUCACU :|| | ||||| ||| |||| GGCACUUGUGGGGAGAGUGGGCAUGUGGAGA-- Vps18 mmu-miR-484 104 126 -UAGCCCUCCCCUGAC-UCGGACU ||:| ||||||::|| |||| GAUUGUGAGGGGGUUGCAGCCA-- Vps18 mmu-miR-485-5p 636 656 CUUAAGU--AGUGCCGGUCGGAGA ||| ||||||||||||| ---GUCAGGUCACGGCCAGCCUA- Vps18 mmu-miR-490 130 152 -GUCGUACCUCAGGAGGUCCAAC |||| |||| ::|:||||| UCAGCCGGGAGGUUUUCAGGUG- Vps18 mmu-miR-500 453 477 GACU--UGGGAA--CGGGUCCACGUA |: :|||| ||: ||| ||| -CGGGUGCCCUGAGGCUGAGG-GCAC Vps18 mmu-miR-501 475 493 AAAGUGGGUCCCUGUUUCCUAA ||||: |||||||:||: --ACACCU-GGGACAAGGGGA- Vps18 mmu-miR-532 768 787 UGCCAGGAUGUGAGUUCCGUAC |||||| |||| ::||: -AGGUCCUUCACUGGGGGUG-- Vps18 mmu-miR-542-5p 431 467 -GCACUG-----------UACUA-CUA-GGGGCUC- :||||| :|| |:| |||:||| AUGUGACCUGGGGCUCCAGUGUCGGGUGCCCUGAGG Vps18 mmu-miR-615 378 408 -UUC-UCCCUCUGGG-UCCGA----GCCU- ||| ||| |||||| |||| :||: CAAGCAGGCAGACCCUAGGCACUUGUGGGG Vps18 mmu-miR-666 441 470 -CCGAGAGUGUCGA--CACGGG----CGA- ||||| || |: |||||| ||| GGGCUC-CAGUGUCGGGUGCCCUGAGGCUG Vps18 mmu-miR-667 759 799 -GAACC-CG-----------ACCCA----CCGUCCACAGU ||||| |: |||| ||||||| |: CCUUGGCGUAGGUCCUUCACUGGGGGUGAGGCAGGUUUUG Vps18 mmu-miR-668 404 439 -CCA--UCACCCGG------CU-CGGCU-CACUGU || ||||||| || ||: ||||| GGGGAGAGUGGGCAUGUGGAGAUGCUAAUGUGACC Vps18 mmu-miR-671 309 333 -GGAGGUCGGGGAGGUCCCGAAGGA ||||| |:||:|||| || ||: UCCUCC-GUCCUUCCACAGCCUCUG Vps18 mmu-miR-672 631 656 GUGUGU-GUCA--UGU-GGUUGGAGU ||| : ||| ||: |||:||| AACAGGUCAGGUCACGGCCAGCCUA- Vps18 mmu-miR-673 193 219 GAGGUUCC--UGGUCUCGA-CACUC- ||| ||| :|| ||||| ||||| GUCCCAGGCAGCCCGAGCUGGUGAGA Vps18 mmu-miR-674 161 189 AUGUGGUGA-----GGGUAGAGUCACG- :| ::|| ||::|||:|| || AGCUGUGCUUCAGACCUGUCUUAGAGCU Vps18 mmu-miR-674* 140 169 AACAAGACUCUACC-------CUCGACAC- |||:| ||:|| |||||||| -GGUUUUCAGGUGCGAACGCCGAGCUGUGC Vps18 mmu-miR-676 318 337 UCGAGUUGUUGGAGUCCUGCC :|| |||:|||| |||| -CUUCCACAGCCUCUGGACC- Vps18 mmu-miR-679 278 305 -UGGUU----CUCAGUGGAGUGUCAGG- ||| |||| :|| |:| |||| CACCUGGACUGAGUGGCC-CGCUGUCCU Vps18 mmu-miR-680 443 463 GGGGGU-ACAGUCGUCUACGGG- |:||| |||| :|:||||| GCUCCAGUGUC---GGGUGCCCU Vps18 mmu-miR-686 772 794 AGAAGUGGCAGACC-CUUCGUUA ||||||:| || ||:|||: CCUUCACUGGG-GGUGAGGCAGG Vps18 mmu-miR-687 553 574 AGUAACGACGUAAG--GUCCUAUC ||||| ||||||| ---AUGCUGAAGCUAACAGGAUAU Vps18 mmu-miR-688 599 616 CUUAUUCAUCAG-CGGACGCU ||| || |||||| ---CAAGAAGGCUGCCUGCA- Vps18 mmu-miR-689 454 487 -CCUGGGG----CGGCUCGC-------CCCUGC || ||| ||:||| | ||||| GGGUGCCCUGAGGCUGAGGGCACACCUGGGACA Vps18 mmu-miR-693-3p 594 612 AAUGUCGGUGUAGACUUUCGACG- |||||| |||:||||| ----UGCCACAA--GAAGGCUGCC Vps18 mmu-miR-693-5p 439 471 CUUUUGAA-----AGCCUACA-----CCGAC- ::::|| ||||:|| ||||| UGGGGCUCCAGUGUCGGGUGCCCUGAGGCUGA Vps18 mmu-miR-694 127 150 -GAAGUC--CGUUGUAAAAGUC- |||||| | :| :||||||| GCUUCAGCCGGGAGGUUUUCAGG Vps18 mmu-miR-699 634 656 GCUCGGUCCAG---CGUGACGGA- :|:|||||| || | |||| -AGGUCAGGUCACGGC-CAGCCUA Vps18 mmu-miR-702 401 419 CUCGCCCCAUUUCCCACCCGU- |:|||| || ||||||| -UGUGGGG---AGAGUGGGCAU Vps18 mmu-miR-705 292 326 ACGGGUGG-------------GGU-GGAGGGUGG ||||:|: ||: |||:|||| GGCCCGCUGUCCUUCCUUCCUCCGUCCUUCCACA Vps18 mmu-miR-709 308 341 -AGGAGGA----------CGGAGAC--GGAGG- |||||| ||||||| ||||| UUCCUCCGUCCUUCCACAGCCUCUGGACCUCCA Vps18 mmu-miR-711 83 103 -GAAUGUAGAGAGGGGCCCAGGG |||: ||: |||||||: CCUUGAG---CUUGCCGGGUCUG Vps18 mmu-miR-714 52 75 -CGCUGGCUGG-CCGGGAGCAGC- |||| | || |||||| ||:| UGCGAAAG-CCAGGCCCUGGUUGG Vps18 mmu-miR-715 400 426 GUGCGCCCC---CACACGU--GCCUC- :|:|||| ||| ||| :|||| -UUGUGGGGAGAGUGGGCAUGUGGAGA Vps18 mmu-miR-719 118 141 UUGUAAAAA-GACAUCGGCUCUA :|| || |||||:|| UGCAGCCAAGCUUCAGCCGGGAG Vps18 mmu-miR-744 36 71 -CGACAAUC-GGGA-------------UCGGGGCGU |||| || |||| :||||:| AGCUGCCAGACCCUCCUGCGAAAGCCAGGCCCUGG- Vps18 mmu-miR-758 621 649 AUCACCU----------GGUCCAGUGUUU ||||| :||||||||:: -UGUGGAAUAGAACAGGUCAGGUCACGGC Vps18 mmu-miR-761 448 471 ACACAGUCAAAGUGGGA---CGACG |||||:| ::|||| |||| AGUGUCGGG--UGCCCUGAGGCUGA Vps18 mmu-miR-762 186 208 CGAGACAGGGCCGGG---GUCGGGG ||| |||| ||| |||||| --GCUG-CCCGUCCCAGGCAGCCCG Vps18 mmu-miR-763 294 335 CGGUGAC--------------CAAGAAGG-GUCG---ACC ||:||| || ||||| |||| ||| CCCGCUGUCCUUCCUUCCUCCGUCCUUCCACAGCCUCUGGA Vps18 mmu-miR-764-3p 631 656 -UGUCAA---CGGUGAUACCGGA-GGA- |||| |:||| |||| ||| AACAGGUCAGGUCAC---GGCCAGCCUA Vps18 mmu-miR-764-5p 404 431 -UCCU----CCUGUACAC-UC-GUGG- :||| ||:|||||| || ::|: GGGGAGAGUGGGCAUGUGGAGAUGCUA Vps18 mmu-miR-770-3p 33 72 -GGUCGA-GGUG--------------CAGUCCGGGUGC- |||||| ||| | ||||||| | UCCAGCUGCCAGACCCUCCUGCGAAAGCCAGGCCCUGGU Vps18 mmu-miR-801 655 685 -CAGCU---------AAGGCGUGCGUGUCGUUAG ||||| |||: | || |||||| AGUCGACAUAAUAAGUUCU--AGGC-CAGCAAA- Vps18 mmu-miR-9 358 378 GUAUGUCGAUCUAUUGGUUUCU- || ||||:|:||| |:|| ---UCAACUAGGUGACCCAGGAG Vps18 mmu-miR-92 132 156 GUCCGGCCCU------GUUCACGUUAU ||||||| ||:||||:| --AGCCGGGAGGUUUUCAGGUGCGAA- Vps18 mmu-miR-98 332 362 -UUGUUAUGUUGAAU-------GAUGGAGU- :|| ||:|| ||:||||| GGACCUC-CAGCUCGCCCUCUUCUGCCUCAA Vps18 mmu-miR-99b 763 788 GCGU-UCCAGCCAA-GAUGCCCAC- ||: ||||| ||: ||||| GGCGUAGGUCCUUCACUGGGGGUGA Vps18 mmu-miR-140 236 243 GA-------------------UGGUAUCCCAUU--UUGGUGAC :||:|: ||||||| CAGCCCGAGCUGGUGAGAUCAGCCGUGAUCCUUUUAACCACUA Vps18 mmu-miR-184 312 319 ----------------UGGGA-AUAGUCAA----GAGGCAGGU :||| |:|| |||||||| UCACCUGGACUGAGUGGCCCGCUGUCCUUCCUUCCUCCGUCCU Vps18 mmu-miR-201 285 292 UC------------------UUGUUAC---GGAA-UGACUCAU |:|| ||| |||||||: ACAGUUCCUCUGUUCUCGUCAGCAUGUUCACCUGGACUGAGUGG Vps18 mmu-miR-323 429 436 ------------UCUC-CAGCUG-GCAC-------AUUACACG :||| || |:| :||| ||||||| AGGCACUUGUGGGGAGAGUGGGCAUGUGGAGAUGCUAAUGUGA Vps18 mmu-miR-346 384 391 UC-------------UCCG------UC-CGUGAGCCCGUCUGU |||: :| ||| | ||||||| UCUUCUGCCUCAACUAGGUGACCCAGGAGCAAGCAGGCAGACC Vps18 mmu-miR-485-5p 324 331 CUUAA--------------------GUAGUGCCG-GUCGGAGA |:|| |||||||| AGUGGCCCGCUGUCCUUCCUUCCUCCGUCCUUCCACAGCCUCUG Vps18 mmu-miR-674* 160 167 AA--------------CAAGACUCUAC-C------CUCGACAC |||:| ||:|| | |||||||| AAGCUUCAGCCGGGAGGUUUUCAGGUGCGAACGCCGAGCUGUGC Vps18 mmu-miR-687 566 573 AGUA-------------------ACGACGUAAG--GUCCUAUC ||||| ||||||| UGGACUUGAUGGCUUUGUGUUGAUGCUGAAGCUAACAGGAUAU Vps18 mmu-miR-709 353 360 A----------------GGAGGAC--------GGAGACGGAGG ||||| |:|||||||| CUUCCACAGCCUCUGGACCUCCAGCUCGCCCUCUUCUGCCUCA Vps18 mmu-miR-742 540 547 AAA-------------------UGGG-UCGU-ACCACCGAAAG :||| :| || ||||||| AUUAAAUCACGCUACAAUGGUGGCCCUGGACUUGAUGGCUUUG Vps18 mmu-let-7b 339 360 uUGGUGUGUUGGAUGAUGGAGU | | |:| :|| ||:||||| cAGCTCGCCCTCTTCTGCCTCA Vps18 mmu-let-7c 333 360 uUGGUAUGUUG-------GAUGAUGGAGU ||| | ||:| || ||:||||| gACC-TCCAGCTCGCCCTCTTCTGCCTCA Vps18 mmu-let-7e 338 360 ugauauGUUGGAG--GAUGGAGU |: |||| ||:||||| ccagctCGCCCTCTTCTGCCTCA Vps18 mmu-let-7e 318 339 ugauaUGUUGGAGGA--UGGAGu |||:||| || ||||| cttccACAGCCT-CTGGACCTCc Vps18 mmu-miR-103 537 560 AGUAUCGGGACAU-GUUACGACga | ||:||::|||: ::|||||| TGATGGCTTTGTGTTGATGCTGaa Vps18 mmu-miR-106b 257 278 uAGACGUGA-CAGUCGUGAAAu ||||: || |||||||: || cTCTGTTCTCGTCAGCATGTTc Vps18 mmu-miR-107 537 560 ACUAUCGGGACAU-GUUACGACga ||||:||::|||: ::|||||| TGATGGCTTTGTGTTGATGCTGaa Vps18 mmu-miR-125b 443 474 aGUGUUCA-AUCCCA---------GAGUCCCu | | ||| | |||| || |||| gCTCCAGTGTCGGGTGCCCTGAGGCTGAGGGc Vps18 mmu-miR-134 325 347 ggGGAGACCAGUUGGUC-AGUGu ||||||| | |||| ||:| agCCTCTGGACCTCCAGCTCGCc Vps18 mmu-miR-140 222 243 gaugguaucccauuUUGGUGAc ||||||| gccgtgatccttttAACCACTa Vps18 mmu-miR-140* 445 468 AGG-CACCAAG---AUGGGACACCau ||| ||| || |:||||| || TCCAGTG--TCGGGTGCCCTGAGGct Vps18 mmu-miR-148a 444 464 uguuUCA-AGACAUCACGUGACU ||| || | |||| |||| ctccAGTGTCGG--GTGCCCTGA Vps18 mmu-miR-148b 444 464 uguuUCAAGACACUACGUGACU ||| : | |:||| |||| ctccAGTGTCG-GGTGCCCTGA Vps18 mmu-miR-149 43 64 ccucacuucugugccUCGGUCu |||||| agaccctcctgcgaaAGCCAGg Vps18 mmu-miR-150 476 502 GU-GACCAUGUUCCC----AACCCUCU || |||| ||||||| | |||||| CACCTGGGACAAGGGGAAATAGGGAGA Vps18 mmu-miR-181a* 515 543 CCAUGUUA-----GUUGCC--AGCUACCa | |||||| | :|| |:||||| GCTACAATGGTGGCCCTGGACTTGATGGc Vps18 mmu-miR-183 447 463 GUCACUUAAGAUGGUCACGGUAu ||||| | | :||||| | CAGTG-----T-CGGGTGCCCTg Vps18 mmu-miR-184 300 319 ugGGAAUAGUCAAGAGGCAGGu ||| || | |||||||| gtCCT--TCCTTCCTCCGTCCt Vps18 mmu-miR-184 64 85 uGGGAAUAGUCAAGAGGCAGGu |||| :|::|| :|| |||| gCCCTGGTTGGTGTTCGGTCCt Vps18 mmu-miR-193 431 451 gACCCUGAAACAUCC--GGUCAa || ||| | | || ||||| aTGTGACCTGG--GGCTCCAGTg Vps18 mmu-miR-199a 764 782 CUUGUCCAUCAGACUUGUGACCC | ::|||| || ||||||| GCGTAGGT--CCTT--CACTGGG Vps18 mmu-miR-201 268 292 ucUUGUUAC----GGA-AUGACUCAu |:| ||| ||| ||||||| tcAGC-ATGTTCACCTGGACTGAGTg Vps18 mmu-miR-204 470 493 guCCGUAU---CCUACUGUUUCCCUU |||| | || |||||:||||| agGGCACACCTGG--GACAAGGGGAA Vps18 mmu-miR-207 402 428 CUCCCUCCUC-UCGGU---CCUCUUCG | |||: ||| :| || ||||| || GTGGGGAGAGTGGGCATGTGGAGATGC Vps18 mmu-miR-211 471 493 uCCGUUU---CCUACUGUUUCCCUU |||| | || |||||:||||| gGGCACACCTGG--GACAAGGGGAA Vps18 mmu-miR-214 444 470 GACGG--ACAG-ACAC-GGA---CGACa || || |||| ||| ||| |||| CT-CCAGTGTCGGGTGCCCTGAGGCTGa Vps18 mmu-miR-22 767 795 uguCAAGAAGUUGA--------CCGUCGAA || |||| ||| ||||| || tagGTCCTTC-ACTGGGGGTGAGGCAGGTT Vps18 mmu-miR-24 273 293 gACAAG-GACGACUUGACUCggu ||||| | |||:|||||| aTGTTCAC--CTGGACTGAGtgg Vps18 mmu-miR-25 130 156 AGUCUGGCUCU------GUUCACGUUac |||| |||:|| ||:||||:| TCAG-CCGGGAGGTTTTCAGGTGCGAac Vps18 mmu-miR-27a 419 437 CGCCUUGAAUCGGUGACACUu |:|||: | ||:| ||||| GTGGAGAT--GCTAATGTGAc Vps18 mmu-miR-27b 385 406 CGUCUUGAAUCGGUG-ACACuu ||||| | ||| ||| |||| GCAGACCCTAGGCACTTGTGgg Vps18 mmu-miR-28 428 449 GAGUUAU-CU-GACACUCGAGGaa || |||: || ||| |:||||| CT-AATGTGACCTG-GGGCTCCag Vps18 mmu-miR-292-3p 381 401 uGUGAGUUUUGGACCGCCGUGAA || ||:| ||| ||||||| gCAGGCAGACCCTA--GGCACTT Vps18 mmu-miR-293 513 531 UGUGAUGUUUGAGACGCCGUGA ||:|||||| : |:||| || ACGCTACAA---TGGTGGCCCT Vps18 mmu-miR-294 381 402 uGUGUGUUUUCCCUUCGUGAAa || :||:| |:|||||| gCAGGCAGACCCTAGGCACTTg Vps18 mmu-miR-296 99 120 uGUC-CUAACUCCCCCCCggga | | ||||| | ||||| tCTGCGATTGTGAGGGGGttgc Vps18 mmu-miR-298 337 357 ccuUCUUGUCGGGAGGAGACGG || | ||||||:|||||| tccAGCTC-GCCCTCTTCTGCC Vps18 mmu-miR-29a 132 154 UUGGCU-----AAAGUCUACCACGau |:|||: ||||| ||||| AGCCGGGAGGTTTTCA---GGTGCga Vps18 mmu-miR-320 322 346 aagcgGGAGAGUUG--GGUCGAaaa ||||| :|| |||||| cacagCCTCTGGACCTCCAGCTcgc Vps18 mmu-miR-323 406 436 uCUC-CAGCUG-GCAC-------AUUACACg ||| || |:| :||| ||||||| gGAGAGTGGGCATGTGGAGATGCTAATGTGa Vps18 mmu-miR-324-3p 392 422 GGUCGUCGUGGAC----------CCCGU-CACC |:|| ||||:|| ||||| |||| CTAG--GCACTTGTGGGGAGAGTGGGCATGTGG Vps18 mmu-miR-324-3p 371 391 GGUCGUCGUGGAC-CCCGUCacc |||| |||| | ||||| CCAGGAGCA--AGCAGGCAGacc Vps18 mmu-miR-326 448 466 UGACCUCCUUCCCGGGUCUCC | || || | |||| |||| AGTGTCGG--GTGCCCTGAGG Vps18 mmu-miR-330 518 548 agagACGUCCGGGAC--------ACGAAACg || ||||||| |||||| acaaTGGTGGCCCTGGACTTGATGGCTTTGt Vps18 mmu-miR-331 758 785 aaGAUCC-UAUCC-----G-GGUCCCCg || || :|||| | |::|||| gcCTTGGCGTAGGTCCTTCACTGGGGGt Vps18 mmu-miR-338 538 560 aguuguuuuagugACUACGACcu |||||||| gatggctttgtgtTGATGCTGaa Vps18 mmu-miR-339 468 491 ACUC----GAGGACCUCCUG-UCCCu |||| | |||| |||| |||| TGAGGGCACACCTG--GGACAAGGGg Vps18 mmu-miR-342 93 113 CUGCCC--ACGCUAAAGACACACUCu | |||| |||||| |||||| GCCGGGTCTGCGAT-----TGTGAGg Vps18 mmu-miR-345 770 790 CGUGACCUGAUCCCCAGUCgu |: || |||:||||| || GTCCTTCACTGGGGGTGAGgc Vps18 mmu-miR-346 367 391 uCUCCGUC--CGUGAGCCCGUCUGu || ||| ||| | ||||||| tGACCCAGGAGCAAGCAGGCAGACc Vps18 mmu-miR-34a 21 43 uUGUUGGUCGAUUCUGU-GACGGU |||: || : :| || |||||| gACAGACA-TGGATCCAGCTGCCA Vps18 mmu-miR-34c 334 358 cguuaGUCGAUU--GAUGUGACGGA ||||| : || : |||||| acctcCAGCTCGCCCTCTTCTGCCT Vps18 mmu-miR-351 440 474 guCCGAGUU-----UCC-CGAG-----GAGUCCCu ||||| | :|| || | || |||| ggGGCTCCAGTGTCGGGTGCCCTGAGGCTGAGGGc Vps18 mmu-miR-362 472 492 aaGUGUGGAUCCAAGGUUCCuaa |||||||:|| ||||| ggCACACCTGGG--ACAAGGgga Vps18 mmu-miR-365 392 420 uAUUCCUAAAAAUC-------CCCGUAau ||:| | || |:| |||||| cTAGGCACTTGTGGGGAGAGTGGGCATgt Vps18 mmu-miR-370 360 386 UUGGUCCAAGGUGGG-----G-UCGUCCG |||:|||| |||| | ||||||| AACTAGGT--GACCCAGGAGCAAGCAGGC Vps18 mmu-miR-423 134 164 GACUC-CCCGGAGUC--------UGGCUCGA | |:| || ::|||| :||||||| CCGGGAGGTTTTCAGGTGCGAACGCCGAGCT Vps18 mmu-miR-424 20 43 agguUUUGUACUUA--ACGACGac |:|||||:|| ||||| ggacAGACATGGATCCAGCTGCca Vps18 mmu-miR-431 733 753 ggACGUACUGCCGGACGUUCUGu | || || | |||||||| | agTCCA-GA-GTCCTGCAAGCCt Vps18 mmu-miR-434-5p 167 188 CCAAGUUUGGUACUCAG---CUCGA | ||||:||| | ||| ||||| GCTTCAGACC-T--GTCTTAGAGCT Vps18 mmu-miR-449b 338 358 GGUCGAUCGUUACGUGACGGA |||||| || | : |||||| CCAGCTCGCCCTCTTCTGCCT Vps18 mmu-miR-455-3p 448 472 UCACA-UAUACGGGCAC-CUGACgua ||||| : :||||| || |:||| AGTGTCGGGTGCCC-TGAGGCTGagg Vps18 mmu-miR-455-5p 459 479 gcuACAUCAGGUUUCCGUGUau || || |::|:|||||| cccTG-AGGCTGAGGGCACAcc Vps18 mmu-miR-465-3p 47 72 aGAUGAAUCUU----UCCGGGACUAg || || ||| ||||||||:| cCTCCTGCGAAAGCCAGGCCCTGGTt Vps18 mmu-miR-467* 382 403 GUAUAUGUACG-UCCGUGAAug || : | | | |||||||| CAGGCAGACCCTAGGCACTTgt Vps18 mmu-miR-483 391 414 uGUUC--UGCCCUCCCCUCCUCACu | || || | ||||| ||||| cCTAGGCACTTGTGGGGA-GAGTGg Vps18 mmu-miR-484 105 127 UAGCCCUCCCCUGAC-UCGGacu ||:| ||||||::|| |||| ATTGTGAGGGGGTTGCAGCCaag Vps18 mmu-miR-485-5p 633 656 cUUAAGU--AGUGCCGGUCGGAga |: ||| ||||||||||||| cAGGTCAGGTCACGGCCAGCCTag Vps18 mmu-miR-485-5p 305 331 cuuAAGUAGUGCCG------GUCGGAGA ||| || || | |||||||| tccTTCCTC-CGTCCTTCCACAGCCTCT Vps18 mmu-miR-490 131 152 GUCGUACCUCAGGAGGUCCAac |||| |||| ::|:||||| CAGCCGGGAGGTTTTCAGGTgc Vps18 mmu-miR-500 438 461 GA-CUUGGGAACG-GGUCCACGua || |::|:| |: :|:||||| CTGGGGCTCCAGTGTCGGGTGCcc Vps18 mmu-miR-501 471 493 aaaGUG-GGUCCCUGUUUCCuaa ||| || |||||||:|| gggCACACCTGGGACAAGGGgaa Vps18 mmu-miR-532 767 793 ugCCAGGAUGUGA-----GUUCCGUac |||||| |||| ::||||| taGGTCCTTCACTGGGGGTGAGGCAgg Vps18 mmu-miR-542-5p 448 465 gCACUGUACUACUAGGGGCUC ||| |: |:|| |||:||| aGTGTCG-GGTG--CCCTGAG Vps18 mmu-miR-615 379 402 UUC-UCCCUCUGGG-UCCGAGccu ||| ||| |||||| |||| | AAGCAGGCAGACCCTAGGCACttg Vps18 mmu-miR-666 442 464 CCGAGAGU----GUCGACACGGGcga ||||| || |:| |||||| GGCTC-CAGTGTCGG--GTGCCCtga Vps18 mmu-miR-667 778 798 GAACCCGACCCACCGUCCACAgu || ||| | | ||||||| | CTGGGG--GTGAGGCAGGTTTtg Vps18 mmu-miR-668 434 461 ccaucACCC---GG-CUCGGCUCACUGu |||| || | |:||:||| | tgaccTGGGGCTCCAGTGTCGGGTGCCc Vps18 mmu-miR-668 398 416 ccAUCACCCGGCUCGGCUCACugu | ||||| || ||||| acTTGTGGG--GA---GAGTGggc Vps18 mmu-miR-671 310 340 GGAGGUCGGGGAGGU--------CCCGAAGGa ||||| |:||:|||| || | ||| CCTCC-GTCCTTCCACAGCCTCTGGACCTCCa Vps18 mmu-miR-672 631 656 gUGUGU-GUCAUGU---GGUUGGAgu ||| : ||| || |||:||| aACAGGTCAGGTCACGGCCAGCCTag Vps18 mmu-miR-674 166 187 AUGUGGUGAGGGUAGAGUCACG |:| :|| ||::|||:|| || TGCTTCAGACCTGTCTTAGAGC Vps18 mmu-miR-674* 139 167 aaCAAGACUCUAC-----C--CUCGACAC |||:| ||:|| | |||||||| agGTTTTCAGGTGCGAACGCCGAGCTGTG Vps18 mmu-miR-676 317 337 ucgAGUUGUUGGAGUCCUGcc || |||:|||| |||| cctTCCACAGCCTCTGGACct Vps18 mmu-miR-679 283 303 ugguuCUCAGUGGAGUGUCAGG |||| :|| |:| |||| ggactGAGTGGCC-CGCTGTCC Vps18 mmu-miR-680 444 461 GGGGGUACAGUCGUCUACGGG |:|| :||| |:|:||||| CTCCAGTGT---CGGGTGCCC Vps18 mmu-miR-687 550 573 AGUAACGACGU--AAGGUCCUAUc |:: ||||| | | ||||||| TTGATGCTGAAGCTAACAGGATAt Vps18 mmu-miR-688 591 616 CUUA-----UUCAUCAG-CGGACGcu |||| ||| || | |||||| GAATGCCACAAGAAGGCTGCCTGCac Vps18 mmu-miR-689 455 486 CC-UGGGG---CGGCUC-------GCCCCUGc || :|||: ||:||| | ||||| GGTGCCCTGAGGCTGAGGGCACACCTGGGACa Vps18 mmu-miR-689 441 460 CCUGGGGCGGCUCGCCCCUGc ||:|:|| :| |||| :| GGGCTCCAGTG-TCGGGTGCc Vps18 mmu-miR-693-3p 590 610 aauguCGGUGUAGACUUUCGACG |||||| |||:||||| ggaatGCCACA--AGAAGGCTGC Vps18 mmu-miR-693-5p 444 469 cuuuUGAAAGCCU-----ACACCGAC | | ||||: || ||||| ctccAGTGTCGGGTGCCCTGAGGCTG Vps18 mmu-miR-694 128 148 GAAGUC--CGUUGUAAAAGUC |||||| | :| :||||||| CTTCAGCCGGGAGGTTTTCAG Vps18 mmu-miR-699 633 650 GCUCGGUCCAGCGUGACGGa | :|:||||| ||| ||| CAGGTCAGGT--CACGGCCa Vps18 mmu-miR-702 400 417 cuCGCCCCAUUUCCCACCCGU |:|||| || ||||||| ttGTGGGG---AGAGTGGGCA Vps18 mmu-miR-705 304 325 ACGGGUGG-GGU-GGAGGGUGg | ||: || ||: |||:|||| TTCCTTCCTCCGTCCTTCCACa Vps18 mmu-miR-709 343 360 AGGAGGACGGAGACGGAGg || ||| |:|||||||| TCGCCCT-CTTCTGCCTCa Vps18 mmu-miR-709 312 331 AGG-AGGACGGAGACGGAGg ||| |||| || | ||||| TCCGTCCTTCCACAGCCTCt Vps18 mmu-miR-711 81 102 gaauguagaGAGGGGCCCAGgg ||: ||||||| gtccttgagCTTGCCGGGTCtg Vps18 mmu-miR-714 53 73 CGCUGGCUGGCCGGGAGCAGC |||| | | |||||| ||:| GCGAAAGCCAGGCCCTGGTTG Vps18 mmu-miR-715 397 424 GUG--CGCCCC---CACACGU--GCCUC ||| |:|||| ||| ||| :|||| CACTTGTGGGGAGAGTGGGCATGTGGAG Vps18 mmu-miR-719 119 140 uuguaaaaaGACAUCGGCUCUa || |||||:|| gcagccaagCTTCAGCCGGGAg Vps18 mmu-miR-742 524 547 aAAUGGGUC--GUACCACCGAAAg | :||| | | || ||||||| gTGGCCCTGGACTTGATGGCTTTg Vps18 mmu-miR-744 53 71 CGACAAUCGGGAUCGGGGCgu || | || || :||||:| GC-GAAAG-CCAGGCCCTGgt Vps18 mmu-miR-758 630 648 aucacCUGGUCCAGUGuuu |::|||||||| gaacaGGTCAGGTCACggc Vps18 mmu-miR-763 326 345 CGGUGACCAAGAAGGGUCGAcc ||| |||| || |||||| GCCTCTGGACCT--CCAGCTcg Vps18 mmu-miR-763 276 301 cgGU-GACCAAG---AAGGGUCGACc || |||| : | || |||| ttCACCTGGACTGAGTGGCCCGCTGt Vps18 mmu-miR-764-3p 632 654 UGUCAA---CGGUGAUACCGG-AGGA |||| | |:||| |||| ||| ACAGGTCAGGTCAC---GGCCAGCCT Vps18 mmu-miR-764-5p 402 419 ucCUCCUGUACACUCGUgg |:||| | |||:||| gtGGGGAGA-GTGGGCAtg Vps18 mmu-miR-770-3p 41 70 GGUC---GAGG-----UGCAGUCCGGGugc |||| |||| | | ||||||| CCAGACCCTCCTGCGAAAGCCAGGCCCtgg Vps18 mmu-miR-801 656 685 CAGCU---------AAGGCGUGCGUGUCGUUag ||||| ||| :| || |||||| GTCGACATAATAAGTTC--TAGGC-CAGCAAag Vps18 mmu-miR-9 355 376 guauGUCGAUCUAUUGGUUUCU || ||||:|:||| |:|| gcctCAACTAGGTGACCCAGGA Vps18 mmu-miR-92 131 156 GUCCGGCCCU------GUUCACGUUau || ||||||| ||:||||:| CA-GCCGGGAGGTTTTCAGGTGCGAac Vps18 mmu-miR-98 340 360 uuguuauguuGAAUGAUGGAGU ||| ||:||||| agctcgccctCTT-CTGCCTCA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Vps18 RAID00073793 mmu-miR-1a-3p miRNA MIMAT0000123 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID00146455 mmu-miR-31-5p miRNA MIMAT0000538 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID00197700 mmu-miR-485-5p miRNA MIMAT0003128 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID00279846 mmu-miR-295-3p miRNA MIMAT0000373 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID00390128 mmu-miR-876-3p miRNA MIMAT0004855 Vps18 mRNA 228545 Prediction 0.2202 Vps18 RAID00509418 mmu-miR-205-5p miRNA MIMAT0000238 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID00699023 mmu-miR-302b-3p miRNA MIMAT0003374 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID00882147 mmu-miR-144-3p miRNA MIMAT0000156 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID00891055 mmu-miR-346-5p miRNA MIMAT0000597 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID00962300 mmu-miR-5113 miRNA MIMAT0020621 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01093465 mmu-miR-615-3p miRNA MIMAT0003783 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01133615 mmu-miR-302d-3p miRNA MIMAT0003377 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01479699 mmu-miR-184-3p miRNA MIMAT0000213 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01537119 mmu-miR-206-3p miRNA MIMAT0000239 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01541901 mmu-miR-140-5p miRNA MIMAT0000151 Vps18 mRNA 228545 Prediction 0.2202 Vps18 RAID01605036 mmu-miR-124-3p miRNA MIMAT0000134 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01614125 mmu-miR-370-3p miRNA MIMAT0001095 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01663886 mmu-miR-455-3p miRNA MIMAT0003742 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01925199 mmu-miR-709 miRNA MIMAT0003499 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01927968 mmu-miR-449a-5p miRNA MIMAT0001542 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID01938045 mmu-miR-202-3p miRNA MIMAT0000235 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID02045590 mmu-miR-149-5p miRNA MIMAT0000159 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID02399517 mmu-miR-294-3p miRNA MIMAT0000372 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID02473529 mmu-miR-6419 miRNA MIMAT0025175 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID02671848 mmu-miR-377-3p miRNA MIMAT0000741 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID02683881 mmu-miR-487b-3p miRNA MIMAT0003184 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID02865260 mmu-miR-590-3p miRNA MIMAT0004896 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID03138170 mmu-miR-216b-5p miRNA MIMAT0003729 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID03168433 mmu-miR-291a-3p miRNA MIMAT0000368 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID03219948 mmu-miR-187-3p miRNA MIMAT0000216 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID03282885 mmu-miR-296-3p miRNA MIMAT0004576 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID03424050 mmu-miR-223-3p miRNA MIMAT0000665 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID03575977 mmu-miR-378a-3p miRNA MIMAT0003151 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID03700793 mmu-miR-125a-3p miRNA MIMAT0004528 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID03861739 mmu-miR-203-3p miRNA MIMAT0000236 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID04017455 mmu-miR-302a-3p miRNA MIMAT0000380 Vps18 mRNA 228545 Prediction 0.1828 Vps18 RAID04036614 mmu-miR-873a-5p miRNA MIMAT0004936 Vps18 mRNA 228545 Prediction 0.1828