DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Pja1 ATTTA 85-1281 1449-1453;1971-1975 Pja1 WWATTTAWW 85-1281 1969-1977

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT013056 mmu-miR-297a-5p Mus musculus Pja1 18744 Mus musculus Sequencing Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 18744 Pja1 cguuccgucaccgGACAUGUCa :||||||| guauaauugcuugUUGUACAGa 2 10 631 652 [mm9:X:96661252-96661273:-] 0.5371 141 7 -11.00 -1.0776 MIMAT0004523 mmu-miR-29b* 18744 Pja1 auUUGGUGGUAUACUUUGGUCg |||: || |||||||||| uaAACUUACA-AUGAAACCAGu 2 21 78 98 [mm9:X:96661806-96661826:-] 0.6106 166 7 -20.21 -0.8738 MIMAT0004523 mmu-miR-29b* 18744 Pja1 auUUGGUGGUAUACUUUGGUCg |||: || |||||||||| uaAACUUACA-AUGAAACCAGu 2 21 78 98 [mm9:X:96661806-96661826:-] 0.6106 166 7 -20.21 -0.7928 MIMAT0004523 mmu-miR-29b* 18744 Pja1 auUUGGUGG-UAUACUUUGGUcg :| |||| | | |||||| caGAACACCAAAAAAAAACCAuc 3 21 591 613 [mm9:X:96661291-96661313:-] 0.5283 135 0 -13.54 -0.1250 MIMAT0000129 mmu-miR-30a* 18744 Pja1 cgacguuuguaggcuGACUUUc |||||| cauacauuuucuaacCUGAAAg 2 8 252 273 [mm9:X:96661631-96661652:-] 0.6132 120 6 -12.12 -0.1190 MIMAT0004541 mmu-miR-188-3p 18744 Pja1 acguuugggacguaCACCCUc |||||| gagagaaacaaagcGUGGGAa 2 8 669 689 [mm9:X:96661215-96661235:-] 0.5189 120 6 -12.22 -0.1885 MIMAT0004546 mmu-miR-202-5p 18744 Pja1 uuucuucauauacgUAUCCUu |||||| aaaaaccaucuuuaAUAGGAa 2 8 604 624 [mm9:X:96661280-96661300:-] 0.5587 120 6 -7.88 -0.2315 MIMAT0000249 mmu-miR-30e* 18744 Pja1 cgacauuuguaggcuGACUUUc |||||| cauacauuuucuaacCUGAAAg 2 8 252 273 [mm9:X:96661631-96661652:-] 0.6132 120 6 -11.24 -0.1190 MIMAT0004575 mmu-miR-295* 18744 Pja1 cuUCACACGGGGUGUAAAC-UCa | ||| :||:::||||| || uuAAUGU-UCCUGUAUUUGCAGu 2 21 390 411 [mm9:X:96661493-96661514:-] 0.6841 126 0 -16.02 -0.8091 MIMAT0004575 mmu-miR-295* 18744 Pja1 cuUCACACGGGGUGUAAAC-UCa | ||| :||:::||||| || uuAAUGU-UCCUGUAUUUGCAGu 2 21 390 411 [mm9:X:96661493-96661514:-] 0.6841 126 0 -16.02 -0.8703 MIMAT0000375 mmu-miR-297a 18744 Pja1 uguACGUGUACGUGUGUAUGUa |||| :| : ||||||| gauUGCA-GUAAGAACAUACAu 2 20 238 258 [mm9:X:96661646-96661666:-] 0.6132 149 7 -13.05 -0.9509 MIMAT0000375 mmu-miR-297a 18744 Pja1 uguACGUGUACGUGUGUAUGUa |||| :| : ||||||| gauUGCA-GUAAGAACAUACAu 2 20 238 258 [mm9:X:96661646-96661666:-] 0.6132 149 7 -13.05 -0.8740 MIMAT0000378 mmu-miR-300 18744 Pja1 cuucucucgaacgggAACGUAu |||||| acaaaauuacuuuugUUGCAUg 2 8 361 382 [mm9:X:96661522-96661543:-] 0.6795 120 6 -10.05 -0.1508 MIMAT0000378 mmu-miR-300 18744 Pja1 cuucucucgAAC--GGGAACGUAu ||| ||||||||| aacuccaaaUUGAUCCCUUGCAUu 2 14 500 523 [mm9:X:96661381-96661404:-] 0.5283 152 7 -16.01 -0.4322 MIMAT0000378 mmu-miR-300 18744 Pja1 cuucucucgaacgggAACGUAu |||||| acaaaauuacuuuugUUGCAUg 2 8 361 382 [mm9:X:96661522-96661543:-] 0.6795 120 6 -10.05 -0.1159 MIMAT0004583 mmu-miR-130b* 18744 Pja1 ucaucacguugucCCUUUCUca ||||||| gcuaaacuaugucGGAAAGAca 3 10 342 363 [mm9:X:96661541-96661562:-] 0.6455 125 0 -7.18 -0.1018 MIMAT0004622 mmu-let-7c-1* 18744 Pja1 ccuuucgaucuucCAACAUGUc |||||||| uguauaauugcuuGUUGUACAg 2 10 630 651 [mm9:X:96661253-96661274:-] 0.5371 145 7 -14.87 -0.4813 MIMAT0004629 mmu-miR-22* 18744 Pja1 auUUCGAACGGUGACUUCUUGa :|| |||| : |||||| uuGAGAUUGCAG--UAAGAACa 2 21 234 253 [mm9:X:96661651-96661670:-] 0.6132 121 6 -10.12 -0.1195 MIMAT0004630 mmu-miR-26b* 18744 Pja1 cucgguuCAUUACCUCUUGUcc | |:| |||||| ugagauuGCAGU-AAGAACAua 3 16 235 255 [mm9:X:96661649-96661669:-] 0.6132 121 0 -8.88 -0.1190 MIMAT0004631 mmu-miR-29a* 18744 Pja1 gacUUGU-GGUUUUCUUUAGUca :||| ::|||| |||||| aauGACAUUUAAAAAAAAUCAuc 3 20 162 184 [mm9:X:96661720-96661742:-] 0.6132 146 0 -9.30 -0.1066 MIMAT0000549 mmu-miR-322* 18744 Pja1 cacaacguCGCGAAGU-ACAAa |:|:|||| |||| aaaguauuGUGUUUCAGUGUUc 2 14 531 552 [mm9:X:96661352-96661373:-] 0.5283 121 0 -14.33 -0.7380 MIMAT0000556 mmu-miR-324-3p 18744 Pja1 ucgucguggacccCGUCACc |||||| uguuccuguauuuGCAGUGg 2 8 394 413 [mm9:X:96661491-96661510:-] 0.6887 120 6 -18.36 -0.1114 MIMAT0000569 mmu-miR-330* 18744 Pja1 agagacguccGGGACACGAAACg :|:| ||||||| uuaaaguucuUCUUUUGCUUUGa 2 14 426 448 [mm9:X:96661456-96661478:-] 0.6679 149 7 -14.17 -1.1923 MIMAT0000569 mmu-miR-330* 18744 Pja1 agagacguccGGGACACGAAACg :|:| ||||||| uuaaaguucuUCUUUUGCUUUGa 2 14 426 448 [mm9:X:96661456-96661478:-] 0.6679 149 7 -14.17 -1.2446 MIMAT0000605 mmu-miR-350 18744 Pja1 cuUUCACAUACC--CGAAACACUu |||| |:| | | |||||| uaAAGU-UGUUGAUUCCUUGUGAu 2 21 112 134 [mm9:X:96661770-96661792:-] 0.6132 121 6 -9.73 -0.1445 MIMAT0000605 mmu-miR-350 18744 Pja1 cuUUCACAUACC--CGAAACACUu |||| |:| | | |||||| uaAAGU-UGUUGAUUCCUUGUGAu 2 21 112 134 [mm9:X:96661770-96661792:-] 0.6132 121 6 -9.73 -0.1153 MIMAT0004665 mmu-miR-218-1* 18744 Pja1 ccacgaacugccuuGGUACAaa |||||| ccuugugauuauuuCCAUGUga 3 9 126 147 [mm9:X:96661757-96661778:-] 0.6132 120 0 -10.63 -0.2795 MIMAT0004665 mmu-miR-218-1* 18744 Pja1 ccacgaacugccuuGGUACAaa |||||| ccuugugauuauuuCCAUGUga 3 9 126 147 [mm9:X:96661757-96661778:-] 0.6132 120 0 -10.63 -0.2282 MIMAT0005444 mmu-miR-218-2* 18744 Pja1 gcgccacgaacugucUUGGUAc |||||| agaacaccaaaaaaaAACCAUc 2 8 592 613 [mm9:X:96661291-96661312:-] 0.5283 120 6 -6.28 -0.1627 MIMAT0001093 mmu-miR-411* 18744 Pja1 ccaaUCACCUGGCACAAUGUAu ||| :|| ||||||| uaacAGUCAGCCUGGUUACAUu 2 19 17 38 [mm9:X:96661866-96661887:-] 0.6081 154 7 -13.72 -0.3203 MIMAT0001093 mmu-miR-411* 18744 Pja1 ccaaUCACCUGGCACAAUGUAu ||| :|| ||||||| uaacAGUCAGCCUGGUUACAUu 2 19 17 38 [mm9:X:96661866-96661887:-] 0.6081 154 7 -13.72 -0.2633 MIMAT0001637 mmu-miR-452 18744 Pja1 cagAGU--CAAAGG--AGACG-UUUGu ||| ||| || ||||| |||| cugUCAGGGUUACCUAUCUGCUAAACu 2 20 323 349 [mm9:X:96661555-96661581:-] 0.6114 125 0 -16.90 -0.8849 MIMAT0001637 mmu-miR-452 18744 Pja1 cagAGU--CAAAGG--AGACG-UUUGu ||| ||| || ||||| |||| cugUCAGGGUUACCUAUCUGCUAAACu 2 20 323 349 [mm9:X:96661555-96661581:-] 0.6114 125 0 -16.90 -0.7983 MIMAT0002106 mmu-miR-465a-5p 18744 Pja1 aguguagucacgGUAAGAUUUAu | |||||||| ggggaaaggaaaCUUUCUAAAUg 2 12 207 229 [mm9:X:96661675-96661697:-] 0.6132 147 7 -10.68 -0.8481 MIMAT0002106 mmu-miR-465a-5p 18744 Pja1 aguguagucacgGUAAGAUUUAu | |||||||| ggggaaaggaaaCUUUCUAAAUg 2 12 207 229 [mm9:X:96661675-96661697:-] 0.6132 147 7 -10.68 -0.7658 MIMAT0004781 mmu-miR-532-3p 18744 Pja1 acguucggaaccCACACCCUcc | |||||| gagagaaacaaaGCGUGGGAaa 3 11 669 690 [mm9:X:96661214-96661235:-] 0.5189 122 0 -10.41 -0.1187 MIMAT0003170 mmu-miR-541 18744 Pja1 ucaCACUGGUUGUAGUCUUAG-GGAa |||| ||| || |||| ||| cggGUGAGCAAGUACA-AAUCACCUu 2 23 744 768 [mm9:X:96661136-96661160:-] 0.5769 128 0 -17.15 -0.3454 MIMAT0004790 mmu-miR-503* 18744 Pja1 gguccgucaccuuUGUUAUGAg |||||||| cuguccgaaacccACAAUACUa 2 10 41 62 [mm9:X:96661842-96661863:-] 0.6081 145 7 -10.43 -0.9546 MIMAT0004790 mmu-miR-503* 18744 Pja1 gguccgucaccuuUGUUAUGAg |||||||| cuguccgaaacccACAAUACUa 2 10 41 62 [mm9:X:96661842-96661863:-] 0.6081 145 7 -10.43 -0.8795 MIMAT0003373 mmu-miR-302b* 18744 Pja1 ucuuucguaaggguacAAUUUCa |||||| gugguguaaaagcuuaUUAAAGu 2 8 410 432 [mm9:X:96661472-96661494:-] 0.6887 120 6 -6.82 -0.1412 MIMAT0003375 mmu-miR-302c* 18744 Pja1 cgucCAUUGGGGUACAAUUUCg |||| | | |||||| ugguGUAAAAGCUUAUUAAAGu 2 19 411 432 [mm9:X:96661472-96661493:-] 0.6887 126 6 -8.44 -0.1384 MIMAT0004822 mmu-miR-770-5p 18744 Pja1 gcaccgggucUGUGCACCACGa :|| ||||||: uccuguauuuGCA-GUGGUGUa 2 13 397 417 [mm9:X:96661487-96661507:-] 0.6887 126 0 -12.82 -0.1308 MIMAT0004822 mmu-miR-770-5p 18744 Pja1 gcaccgggucUGUGCACCACGa :|| ||||||: uccuguauuuGCA-GUGGUGUa 2 13 397 417 [mm9:X:96661487-96661507:-] 0.6887 126 0 -12.82 -0.1233 MIMAT0003898 mmu-miR-760 18744 Pja1 agGGGUG-UCUGG-GU-CUCGGc ||||| | ||: || ||||| aaCCCACAAUACUACAGGAGCCc 2 19 49 71 [mm9:X:96661833-96661855:-] 0.6081 124 0 -21.79 -0.8564 MIMAT0003898 mmu-miR-760 18744 Pja1 agGGGUG-UCUGG-GU-CUCGGc ||||| | ||: || ||||| aaCCCACAAUACUACAGGAGCCc 2 19 49 71 [mm9:X:96661833-96661855:-] 0.6081 124 0 -21.79 -0.7745 MIMAT0003451 mmu-miR-677 18744 Pja1 agUC-UUCGAUUAGUAGUGA-CUu || || |||:|: ||||| || guAGAAAACUAGUUUUCACUAGAa 2 21 559 582 [mm9:X:96661322-96661345:-] 0.5283 131 0 -17.64 -0.8945 MIMAT0003471 mmu-miR-692 18744 Pja1 cucacUCCGCGAGUUUCUCUa :| :| :||||||| gaaauGGUUGACUAAAGAGAg 2 17 651 671 [mm9:X:96661233-96661253:-] 0.4851 144 7 -12.49 -0.5617 MIMAT0004189 mmu-miR-693-3p 18744 Pja1 aaUGUCGGUGUAGACUUUCGAcg :|||: :| | |||||| uuGCAGU--GGUGUAAAAGCUua 3 22 405 425 [mm9:X:96661479-96661499:-] 0.6887 126 0 -12.07 -0.4277 MIMAT0004189 mmu-miR-693-3p 18744 Pja1 aaUGUCGGUGUAGACUUUCGAcg :|||: :| | |||||| uuGCAGU--GGUGUAAAAGCUua 3 22 405 425 [mm9:X:96661479-96661499:-] 0.6887 126 0 -12.07 -0.4192 MIMAT0003480 mmu-miR-297b-5p 18744 Pja1 ugUACAAGU-ACGUGUGUAUGUa || | || | : ||||||| agAU-UGCAGUAAGAACAUACAu 2 21 237 258 [mm9:X:96661646-96661667:-] 0.6132 141 7 -12.92 -0.9477 MIMAT0003480 mmu-miR-297b-5p 18744 Pja1 ugUACAAGU-ACGUGUGUAUGUa || | || | : ||||||| agAU-UGCAGUAAGAACAUACAu 2 21 237 258 [mm9:X:96661646-96661667:-] 0.6132 141 7 -12.92 -0.8706 MIMAT0003485 mmu-miR-455* 18744 Pja1 gcuacaUCAGGUUUCCGU-GUAu || ||| |||| ||| ugacacAGAACAAUGGCAUCAUu 2 17 446 468 [mm9:X:96661436-96661458:-] 0.6472 120 0 -12.34 -0.9331 MIMAT0003494 mmu-miR-704 18744 Pja1 gauccucgucucGUGUACAGa ::|||||| aauuacuuuuguUGCAUGUCa 2 10 365 385 [mm9:X:96661519-96661539:-] 0.6795 125 6 -7.84 -0.2355 MIMAT0003494 mmu-miR-704 18744 Pja1 gauccucgucucGUGUACAGa ::|||||| aauuacuuuuguUGCAUGUCa 2 10 365 385 [mm9:X:96661519-96661539:-] 0.6795 125 6 -7.84 -0.2372 MIMAT0003500 mmu-miR-710 18744 Pja1 gaGUUGAGAGGGGUUCUGA-ACc || :| |:|: ||||| || ccCACUUGUUCUGUAGACUGUGu 2 21 285 307 [mm9:X:96661597-96661619:-] 0.6123 120 0 -11.86 -0.7686 MIMAT0003500 mmu-miR-710 18744 Pja1 gaGUUGAGAGGGGUUCUGA-ACc || :| |:|: ||||| || ccCACUUGUUCUGUAGACUGUGu 2 21 285 307 [mm9:X:96661597-96661619:-] 0.6123 120 0 -11.86 -0.6797 MIMAT0003510 mmu-miR-717 18744 Pja1 ucucuucCAUAGAGACAGACUc | ||:|:||||||| aucauuuGGAUUUUUGUCUGAa 2 16 463 484 [mm9:X:96661420-96661441:-] 0.6472 159 7 -17.01 -1.2210 MIMAT0004236 mmu-miR-741 18744 Pja1 agAUGUAUCUUACCGUA-GAGAGu || | | ||| ||| ||||| uuUAAAAAAAAU--CAUCCUCUCg 2 22 169 190 [mm9:X:96661714-96661735:-] 0.6132 122 0 -11.28 -1.1762 MIMAT0004236 mmu-miR-741 18744 Pja1 agAUGUAUCUUACCGUA-GAGAGu || | | ||| ||| ||||| uuUAAAAAAAAU--CAUCCUCUCg 2 22 169 190 [mm9:X:96661714-96661735:-] 0.6132 122 0 -11.28 -1.1314 MIMAT0004845 mmu-miR-881* 18744 Pja1 ucuACA-CUGACAAUAGAGAGAc ||| ||||| |:||||||| uucUGUAGACUG-UGUCUCUCUu 2 20 293 314 [mm9:X:96661590-96661611:-] 0.6123 168 7 -22.63 -0.5922 MIMAT0004845 mmu-miR-881* 18744 Pja1 ucuACA-CUGACAAUAGAGAGAc ||| ||||| |:||||||| uucUGUAGACUG-UGUCUCUCUu 2 20 293 314 [mm9:X:96661590-96661611:-] 0.6123 168 7 -22.63 -0.5062 MIMAT0004846 mmu-miR-881 18744 Pja1 agAUAAGUCUUUUCUGUGUCaa | ||: | ||||||| cuUCUUUUGCUUUGACACAGaa 3 21 434 455 [mm9:X:96661449-96661470:-] 0.6679 128 0 -10.91 -0.1063 MIMAT0004849 mmu-miR-883a-3p 18744 Pja1 uauGACUCUCGACAACGUCAau :||||| ||||||| ugcUUGAGA----UUGCAGUaa 3 20 231 248 [mm9:X:96661656-96661673:-] 0.6132 130 0 -13.90 -0.1159 MIMAT0004851 mmu-miR-883b-3p 18744 Pja1 uaUGACUCUCUACAACGUCAau :||| || ||||||| auGCUGCUUGAGAUUGCAGUaa 3 21 227 248 [mm9:X:96661656-96661677:-] 0.6132 136 0 -18.47 -0.1148 MIMAT0004865 mmu-miR-297c 18744 Pja1 ugUACAUGU-ACGUGUGUAUGUa || |:|| | : ||||||| agAU-UGCAGUAAGAACAUACAu 2 21 237 258 [mm9:X:96661646-96661667:-] 0.6132 145 7 -13.77 -0.9477 MIMAT0004865 mmu-miR-297c 18744 Pja1 ugUACAUGU-ACGUGUGUAUGUa || |:|| | : ||||||| agAU-UGCAGUAAGAACAUACAu 2 21 237 258 [mm9:X:96661646-96661667:-] 0.6132 145 7 -13.77 -0.8706 MIMAT0004871 mmu-miR-465b-5p 18744 Pja1 guCUAGUCGUGGUAAGAUUUAu || :| | | |||||||| ggGAAAGGAAACUUUCUAAAUg 2 21 208 229 [mm9:X:96661675-96661696:-] 0.6132 156 7 -12.20 -0.8411 MIMAT0004871 mmu-miR-465b-5p 18744 Pja1 guCUAGUCGUGGUAAGAUUUAu || :| | | |||||||| ggGAAAGGAAACUUUCUAAAUg 2 21 208 229 [mm9:X:96661675-96661696:-] 0.6132 156 7 -12.20 -0.7584 MIMAT0004873 mmu-miR-465c-5p 18744 Pja1 guCUAGUCGCGGUAAGAUUUAu || :| | |||||||| ggGAAAGGAAACUUUCUAAAUg 2 21 208 229 [mm9:X:96661675-96661696:-] 0.6132 148 7 -11.50 -0.8481 MIMAT0004873 mmu-miR-465c-5p 18744 Pja1 guCUAGUCGCGGUAAGAUUUAu || :| | |||||||| ggGAAAGGAAACUUUCUAAAUg 2 21 208 229 [mm9:X:96661675-96661696:-] 0.6132 148 7 -11.50 -0.7658 MIMAT0004882 mmu-miR-466f-3p 18744 Pja1 caCACAUACACACACACAUac ||| | || |||||| auGUGAAAAUGGUUGUGUAca 3 20 142 162 [mm9:X:96661742-96661762:-] 0.6132 135 0 -12.53 -0.1497 MIMAT0004882 mmu-miR-466f-3p 18744 Pja1 caCACAUACACACACACAUac ||| | || |||||| auGUGAAAAUGGUUGUGUAca 3 20 142 162 [mm9:X:96661742-96661762:-] 0.6132 135 0 -12.53 -0.1196 MIMAT0004882 mmu-miR-466f-3p 18744 Pja1 cacacauacacacaCACAUAc |||||| uuaauaggaauaagGUGUAUa 2 8 615 635 [mm9:X:96661269-96661289:-] 0.5587 120 6 -5.53 -0.1774 MIMAT0004933 mmu-miR-878-3p 18744 Pja1 agAUGGGUCACACC--ACAGUACg |||:: ||| | ||||||| auUACUU-UUGUUGCAUGUCAUGg 2 21 366 388 [mm9:X:96661516-96661538:-] 0.6795 149 7 -14.54 -0.5541 MIMAT0004933 mmu-miR-878-3p 18744 Pja1 agAUGGGUCACACC--ACAGUACg |||:: ||| | ||||||| auUACUU-UUGUUGCAUGUCAUGg 2 21 366 388 [mm9:X:96661516-96661538:-] 0.6795 149 7 -14.54 -0.5375 MIMAT0004934 mmu-miR-872 18744 Pja1 ggacuugauuguucAUUGGAa |||||| gaacauacauuuucUAACCUg 2 8 249 269 [mm9:X:96661635-96661655:-] 0.6132 120 6 -9.83 -0.2086 MIMAT0004934 mmu-miR-872 18744 Pja1 ggacuugauuguucAUUGGAa |||||| gaacauacauuuucUAACCUg 2 8 249 269 [mm9:X:96661635-96661655:-] 0.6132 120 6 -9.83 -0.1673 MIMAT0004861 mmu-miR-877 18744 Pja1 gggacgcggUAG-AGGAGAug ||| |||||| uuaaaaaaaAUCAUCCUCUcg 3 12 170 190 [mm9:X:96661714-96661734:-] 0.6132 126 0 -11.14 -0.1494 MIMAT0004861 mmu-miR-877 18744 Pja1 gggacgcggUAG-AGGAGAug ||| |||||| uuaaaaaaaAUCAUCCUCUcg 3 12 170 190 [mm9:X:96661714-96661734:-] 0.6132 126 0 -11.14 -0.1194 MIMAT0005832 mmu-miR-669g 18744 Pja1 uaGUACAGUU------GUGUAUGUUACgu ||||| || ::::||||||| ucCAUGUGAAAAUGGUUGUGUACAAUGac 3 22 139 167 [mm9:X:96661737-96661765:-] 0.6132 132 0 -15.81 -0.1305 MIMAT0005832 mmu-miR-669g 18744 Pja1 uaGUACAGUU------GUGUAUGUUACgu ||||| || ::::||||||| ucCAUGUGAAAAUGGUUGUGUACAAUGac 3 22 139 167 [mm9:X:96661737-96661765:-] 0.6132 132 0 -15.81 -0.1039 MIMAT0005834 mmu-miR-466i 18744 Pja1 aucacACAUACAC-ACA-CACAUa ||||| || || ||||| guuccUGUAUUUGCAGUGGUGUAa 2 18 395 418 [mm9:X:96661486-96661509:-] 0.6887 124 0 -10.54 -1.1553 MIMAT0005834 mmu-miR-466i 18744 Pja1 aucacACAUACAC-ACA-CACAUa ||||| || || ||||| guuccUGUAUUUGCAGUGGUGUAa 2 18 395 418 [mm9:X:96661486-96661509:-] 0.6887 124 0 -10.54 -1.0805 MIMAT0005846 mmu-miR-467f 18744 Pja1 acAUCCACACACACACAUAUa |||| | | ||||||| aaUAGGAAUAAG-GUGUAUAa 2 20 617 636 [mm9:X:96661268-96661287:-] 0.5587 149 7 -11.52 -0.9741 MIMAT0005853 mmu-miR-669e 18744 Pja1 uaCUUGUAC--GUGUGUGUU-CUGu ||| ||| :::::|||| ||| guGAAAAUGGUUGUGUACAAUGACa 2 21 144 168 [mm9:X:96661736-96661760:-] 0.6132 123 0 -16.47 -1.2550 MIMAT0005853 mmu-miR-669e 18744 Pja1 uaCUUGUAC--GUGUGUGUU-CUGu ||| ||| :::::|||| ||| guGAAAAUGGUUGUGUACAAUGACa 2 21 144 168 [mm9:X:96661736-96661760:-] 0.6132 123 0 -16.47 -1.2263 MIMAT0007864 mmu-miR-1897-5p 18744 Pja1 gggggagaaagaggUAGGUUUc ||||||| augguaaaaaaugaAUCCAAAg 2 9 718 739 [mm9:X:96661165-96661186:-] 0.5526 140 7 -10.92 -0.8351 MIMAT0007876 mmu-miR-1907 18744 Pja1 uggaggucuaggagACGACGAg ||||||| ggaaacuuucuaaaUGCUGCUu 2 9 214 235 [mm9:X:96661669-96661690:-] 0.6132 140 7 -16.22 -0.6020 MIMAT0007876 mmu-miR-1907 18744 Pja1 uggaggucuaggagACGACGAg ||||||| ggaaacuuucuaaaUGCUGCUu 2 9 214 235 [mm9:X:96661669-96661690:-] 0.6132 140 7 -16.22 -0.5195 MIMAT0007878 mmu-miR-1894-3p 18744 Pja1 gaggGAAGUGGGA-GAGGGAACg || || :| ||||||| guaaCUCCAAAUUGAUCCCUUGc 2 19 498 520 [mm9:X:96661384-96661406:-] 0.5283 145 7 -22.66 -0.7089 MIMAT0009394 mmu-miR-1931 18744 Pja1 cgguagcguggUCGGGAACGUa | |||||||| acuccaaauugAUCCCUUGCAu 2 12 501 522 [mm9:X:96661382-96661403:-] 0.5283 147 7 -18.55 -0.7198 MIMAT0009400 mmu-miR-1936 18744 Pja1 cggucaAGUGUCGUCCAGUCAau | | | || |||||| uuacaaUGAAACCA-GUCAGUca 3 18 83 104 [mm9:X:96661800-96661821:-] 0.6106 127 0 -11.18 -0.1693 MIMAT0009400 mmu-miR-1936 18744 Pja1 cggucaAGUGUCGUCCAGUCAau | | | || |||||| uuacaaUGAAACCA-GUCAGUca 3 18 83 104 [mm9:X:96661800-96661821:-] 0.6106 127 0 -11.18 -0.1356 MIMAT0009409 mmu-miR-1944 18744 Pja1 uuagucuuGAACUGUAAGUCGUGUCUc :|| :| ||:: |||||| aguucuucUUUUGC-UUUGACACAGAa 2 20 430 455 [mm9:X:96661449-96661474:-] 0.6679 125 6 -11.43 -0.1163 MIMAT0009440 mmu-miR-1967 18744 Pja1 cguagaagagggguccUAGGAGu |||||| acauuuaaaaaaaaucAUCCUCu 2 8 166 188 [mm9:X:96661716-96661738:-] 0.6132 120 6 -11.27 -0.1181 MIMAT0009442 mmu-miR-1969 18744 Pja1 uggguacaauuucagaGGUAGAa |||||| gaacaccaaaaaaaaaCCAUCUu 2 8 593 615 [mm9:X:96661289-96661311:-] 0.5283 120 6 -11.39 -0.1670 MIMAT0009444 mmu-miR-1970 18744 Pja1 guuucggauaggggucACUGUGu |||||| aguucuucuuuugcuuUGACACa 2 8 430 452 [mm9:X:96661452-96661474:-] 0.6679 120 6 -13.99 -0.2001 MIMAT0009456 mmu-miR-1839-5p 18744 Pja1 guUCUGGACA-AGAUAG-AUGGAa ||| |||| ||| || ||||| guAGA-CUGUGUCUCUCUUACCUg 2 21 297 319 [mm9:X:96661585-96661607:-] 0.6123 133 0 -16.72 -0.7573 MIMAT0009456 mmu-miR-1839-5p 18744 Pja1 guUCUGGACA-AGAUAG-AUGGAa ||| |||| ||| || ||||| guAGA-CUGUGUCUCUCUUACCUg 2 21 297 319 [mm9:X:96661585-96661607:-] 0.6123 133 0 -16.72 -0.6677 MIMAT0009460 mmu-miR-1982.1 18744 Pja1 gacacccUCUUGUAU-CCCACUCu | |:::|| ||||||| ugaauccAAAGUGUACGGGUGAGc 2 17 729 752 [mm9:X:96661152-96661175:-] 0.5769 151 7 -16.19 -0.7289 MIMAT0009460 mmu-miR-1982.1 18744 Pja1 gacACCCUCUUGUAUCCCACUcu || ||||: |||||| aacUGUCAGAAU---GGGUGAaa 3 21 781 800 [mm9:X:96661104-96661123:-] 0.4886 128 0 -16.56 -0.1988 MIMAT0012772 mmu-miR-599 18744 Pja1 caaacuauuuGACUGUGUu :||||||| uucuuuugcuUUGACACAg 2 10 435 453 [mm9:X:96661451-96661469:-] 0.6679 141 7 -12.87 -1.2206 MIMAT0012774 mmu-miR-664 18744 Pja1 auccgacCCCUCAUUUACUUAu || | |||||||| aaacaauGGUAAAAAAUGAAUc 2 16 713 734 [mm9:X:96661170-96661191:-] 0.5526 151 7 -8.11 -0.7828 MIMAT0015640 mmu-miR-3470a 18744 Pja1 ggucggaccagAUGUUUCACu | ||||||| uaaaaaaugaaUCCAAAGUGu 2 11 722 742 [mm9:X:96661162-96661182:-] 0.5526 142 7 -10.39 -0.5113 MIMAT0000123 mmu-miR-1 18744 Pja1 uauGUAUGAAGAAAUGUAAGGu || :| | ||||||||| aguCA-GCCUGGUUACAUUCCc 2 20 21 41 [mm9:X:96661863-96661883:-] 0.6081 153 7 -13.62 -0.5489 MIMAT0000123 mmu-miR-1 18744 Pja1 uauGUAUGAAGAAAUGUAAGGu || :| | ||||||||| aguCA-GCCUGGUUACAUUCCc 2 20 21 41 [mm9:X:96661863-96661883:-] 0.6081 153 7 -13.62 -0.4694 MIMAT0000124 mmu-miR-15b 18744 Pja1 acaUUUGGUA-CUACACGACGAu ||||: | | ||||||| aggAAACUUUCUAAAUGCUGCUu 2 20 213 235 [mm9:X:96661669-96661691:-] 0.6132 150 7 -13.13 -0.5947 MIMAT0000124 mmu-miR-15b 18744 Pja1 acaUUUGGUA-CUACACGACGAu ||||: | | ||||||| aggAAACUUUCUAAAUGCUGCUu 2 20 213 235 [mm9:X:96661669-96661691:-] 0.6132 150 7 -13.13 -0.5125 MIMAT0000125 mmu-miR-23b 18744 Pja1 ccAUUAGGGACCGUUACACUa |:||: :| | |||||| ugUGAUUAUU-UCCAUGUGAa 2 20 129 148 [mm9:X:96661756-96661775:-] 0.6132 121 6 -9.45 -0.1875 MIMAT0000125 mmu-miR-23b 18744 Pja1 ccAUUAGGGACCGUUACACUa |:||: :| | |||||| ugUGAUUAUU-UCCAUGUGAa 2 20 129 148 [mm9:X:96661756-96661775:-] 0.6132 121 6 -9.45 -0.1507 MIMAT0000131 mmu-miR-99a 18744 Pja1 guguucuagccUAGAUGCCCAa :| ||||||| augaauccaaaGUGUACGGGUg 2 12 728 749 [mm9:X:96661155-96661176:-] 0.5526 143 7 -12.94 -0.3728 MIMAT0000132 mmu-miR-99b 18744 Pja1 gcguuccagccaAGAUGCCCAc | ||||||| augaauccaaagUGUACGGGUg 2 11 728 749 [mm9:X:96661155-96661176:-] 0.5526 142 7 -17.50 -0.3787 MIMAT0004528 mmu-miR-125a-3p 18744 Pja1 ccgAGGGUUCUUGGAGUGGACa |::||: : :|||||||| gugUUUCAGUGUUCUCACCUGu 2 20 539 560 [mm9:X:96661344-96661365:-] 0.5283 159 7 -23.26 -0.6807 MIMAT0000142 mmu-miR-9 18744 Pja1 agUAUGUCGA-UCUAUUGGUUUcu ||:| | ||| |||||| aaAUGCUCAUCAGAACACCAAAaa 3 22 581 604 [mm9:X:96661300-96661323:-] 0.5283 132 0 -9.71 -0.1023 MIMAT0000149 mmu-miR-137 18744 Pja1 gaUGCGCAUAAGAAUUCGUU-AUu | |:||| |:||||| || caAAGUGUACGGGUGAGCAAGUAc 2 22 735 758 [mm9:X:96661146-96661169:-] 0.5769 121 0 -11.79 -0.9339 MIMAT0000153 mmu-miR-141 18744 Pja1 gguagaaauggucuGUCACAAu ||||||| aaaguauuguguuuCAGUGUUc 2 9 531 552 [mm9:X:96661352-96661373:-] 0.5283 140 7 -9.54 -0.7395 MIMAT0000158 mmu-miR-146a 18744 Pja1 uuggguaccuUAA-GUCAAGAGu ||| ||||||: guaaaagcuuAUUAAAGUUCUUc 2 13 415 437 [mm9:X:96661467-96661489:-] 0.6679 127 0 -10.59 -0.1674 MIMAT0000158 mmu-miR-146a 18744 Pja1 uuggguaccuUAA-GUCAAGAGu ||| ||||||: guaaaagcuuAUUAAAGUUCUUc 2 13 415 437 [mm9:X:96661467-96661489:-] 0.6679 127 0 -10.59 -0.1179 MIMAT0000164 mmu-miR-154 18744 Pja1 gcuuccguugugccuAUUGGAu |||||| agaacauacauuuucUAACCUg 2 8 248 269 [mm9:X:96661635-96661656:-] 0.6132 120 6 -10.79 -0.2067 MIMAT0000164 mmu-miR-154 18744 Pja1 gcuuccguugugccuAUUGGAu |||||| agaacauacauuuucUAACCUg 2 8 248 269 [mm9:X:96661635-96661656:-] 0.6132 120 6 -10.79 -0.1657 MIMAT0000209 mmu-miR-129-5p 18744 Pja1 cguucgGGUC-UGGCGUUUUUc :||| || |||||| ugcucaUCAGAACACCAAAAAa 2 16 584 605 [mm9:X:96661299-96661320:-] 0.5283 122 6 -11.16 -0.1571 MIMAT0000215 mmu-miR-186 18744 Pja1 ucGGGUUUUC-CUCUUAA-GAAAc :| :|||| | |||| |||| ugUCGGAAAGACAAAAUUACUUUu 2 21 351 374 [mm9:X:96661530-96661553:-] 0.6455 123 0 -8.57 -0.9156 MIMAT0000215 mmu-miR-186 18744 Pja1 ucGGGUUUUC-CUCUUAA-GAAAc :| :|||| | |||| |||| ugUCGGAAAGACAAAAUUACUUUu 2 21 351 374 [mm9:X:96661530-96661553:-] 0.6455 123 0 -8.57 -0.8299 MIMAT0000225 mmu-miR-195 18744 Pja1 cggUUAUAAAGA--CACGACGAu || ||||| ||||||| aggAAACUUUCUAAAUGCUGCUu 2 19 213 235 [mm9:X:96661669-96661691:-] 0.6132 153 7 -13.00 -0.5947 MIMAT0000225 mmu-miR-195 18744 Pja1 cggUUAUAAAGA--CACGACGAu || ||||| ||||||| aggAAACUUUCUAAAUGCUGCUu 2 19 213 235 [mm9:X:96661669-96661691:-] 0.6132 153 7 -13.00 -0.5125 MIMAT0000236 mmu-miR-203 18744 Pja1 gaucAC-CAGGAU-UUGUAAAGUg || || | | :|||||| | ugguUGUGUACAAUGACAUUUAAa 2 19 151 174 [mm9:X:96661730-96661753:-] 0.6132 120 0 -8.60 -0.1100 MIMAT0000236 mmu-miR-203 18744 Pja1 gaUCACCAGGAUUUGUAAA-GUg | || ||| :||||| || aaAUUGAUCCCUUGCAUUUGCAa 2 21 506 528 [mm9:X:96661376-96661398:-] 0.5283 120 0 -8.88 -0.7170 MIMAT0000239 mmu-miR-206 18744 Pja1 ggUGU--GU-GAAGGAAUGUAAGGu ||| || | | ||||||||| uaACAGUCAGCCUGGUUACAUUCCc 2 21 17 41 [mm9:X:96661863-96661887:-] 0.6081 154 7 -15.81 -0.5489 MIMAT0000239 mmu-miR-206 18744 Pja1 ggUGU--GU-GAAGGAAUGUAAGGu ||| || | | ||||||||| uaACAGUCAGCCUGGUUACAUUCCc 2 21 17 41 [mm9:X:96661863-96661887:-] 0.6081 154 7 -15.81 -0.4694 MIMAT0004577 mmu-miR-299 18744 Pja1 uucgccaaauggcaGGGUGUau |||||| auuuaaaaaaaaaaCCCACAga 3 9 690 711 [mm9:X:96661193-96661214:-] 0.5526 120 0 -16.13 -0.1211 MIMAT0000513 mmu-miR-19b 18744 Pja1 agUCAA-AACGUACCUAAAC-GUGu |||| || : | | |||| ||| aaAGUUCUUCUUUUGCUUUGACAC- 2 22 428 451 [mm9:X:96661453-96661476:-] 0.6679 124 0 -6.39 -0.8612 MIMAT0000513 mmu-miR-19b 18744 Pja1 agUCAA-AACGUACCUAAAC-GUGu |||| || : | | |||| ||| aaAGUUCUUCUUUUGCUUUGACACa 2 22 428 452 [mm9:X:96661452-96661476:-] 0.6679 124 0 -9.14 -1.2176 MIMAT0000519 mmu-miR-200a 18744 Pja1 uguagcaauggucuGUCACAAu ||||||| aaaguauuguguuuCAGUGUUc 2 9 531 552 [mm9:X:96661352-96661373:-] 0.5283 140 7 -13.64 -0.7395 MIMAT0000526 mmu-miR-15a 18744 Pja1 gugUUUGGUA-AUACACGACGAu ||||: | || ||||||| aggAAACUUUCUAAAUGCUGCUu 2 20 213 235 [mm9:X:96661669-96661691:-] 0.6132 158 7 -13.39 -0.5947 MIMAT0000526 mmu-miR-15a 18744 Pja1 gugUUUGGUA-AUACACGACGAu ||||: | || ||||||| aggAAACUUUCUAAAUGCUGCUu 2 20 213 235 [mm9:X:96661669-96661691:-] 0.6132 158 7 -13.39 -0.5125 MIMAT0000527 mmu-miR-16 18744 Pja1 gcggUUAUAAAUGCACGACGAu | | | || ||||||| ggaaACUUUCUAAAUGCUGCUu 2 19 214 235 [mm9:X:96661669-96661690:-] 0.6132 150 7 -11.02 -0.5947 MIMAT0000527 mmu-miR-16 18744 Pja1 gcggUUAUAAAUGCACGACGAu | | | || ||||||| ggaaACUUUCUAAAUGCUGCUu 2 19 214 235 [mm9:X:96661669-96661690:-] 0.6132 150 7 -11.02 -0.5125 MIMAT0000532 mmu-miR-23a 18744 Pja1 ccuuuagggaccguUACACUa |||||| uugugauuauuuccAUGUGAa 2 8 128 148 [mm9:X:96661756-96661776:-] 0.6132 120 6 -7.51 -0.1875 MIMAT0000532 mmu-miR-23a 18744 Pja1 ccuuuagggaccguUACACUa |||||| uugugauuauuuccAUGUGAa 2 8 128 148 [mm9:X:96661756-96661776:-] 0.6132 120 6 -7.51 -0.1507 MIMAT0000546 mmu-miR-103 18744 Pja1 aguaUCGGGACAUGUUACGACGa | |::| || |||||||| aggaAACUUUCUA-AAUGCUGCu 2 20 213 234 [mm9:X:96661670-96661691:-] 0.6132 157 7 -15.64 -0.7012 MIMAT0000546 mmu-miR-103 18744 Pja1 aguaUCGGGACAUGUUACGACGa | |::| || |||||||| aggaAACUUUCUA-AAUGCUGCu 2 20 213 234 [mm9:X:96661670-96661691:-] 0.6132 157 7 -15.64 -0.6161 MIMAT0000548 mmu-miR-322 18744 Pja1 aggUUUUGUA--CUUAACGACGAc :|||| | || ||||||| aagGAAACUUUCUAAAUGCUGCUu 2 20 212 235 [mm9:X:96661669-96661692:-] 0.6132 154 7 -11.68 -0.6020 MIMAT0000548 mmu-miR-322 18744 Pja1 aggUUUUGUA--CUUAACGACGAc :|||| | || ||||||| aagGAAACUUUCUAAAUGCUGCUu 2 20 212 235 [mm9:X:96661669-96661692:-] 0.6132 154 7 -11.68 -0.5195 MIMAT0000647 mmu-miR-107 18744 Pja1 acuaUCGGGACAUGUUACGACGa | |::| || |||||||| aggaAACUUUCUA-AAUGCUGCu 2 20 213 234 [mm9:X:96661670-96661691:-] 0.6132 157 7 -15.64 -0.7012 MIMAT0000647 mmu-miR-107 18744 Pja1 acuaUCGGGACAUGUUACGACGa | |::| || |||||||| aggaAACUUUCUA-AAUGCUGCu 2 20 213 234 [mm9:X:96661670-96661691:-] 0.6132 157 7 -15.64 -0.6161 MIMAT0000651 mmu-miR-19a 18744 Pja1 agUCAA-AACGUAUCUAAAC-GUGu |||| || : | | |||| ||| aaAGUUCUUCUUUUGCUUUGACAC- 2 22 428 451 [mm9:X:96661453-96661476:-] 0.6679 124 0 -6.39 -0.8612 MIMAT0000651 mmu-miR-19a 18744 Pja1 agUCAA-AACGUAUCUAAAC-GUGu |||| || : | | |||| ||| aaAGUUCUUCUUUUGCUUUGACACa 2 22 428 452 [mm9:X:96661452-96661476:-] 0.6679 124 0 -9.14 -1.2176 MIMAT0000655 mmu-miR-100 18744 Pja1 guguucaagccUAGAUGCCCAa :| ||||||| augaauccaaaGUGUACGGGUg 2 12 728 749 [mm9:X:96661155-96661176:-] 0.5526 143 7 -12.61 -0.3728 MIMAT0000662 mmu-miR-216a 18744 Pja1 agugucaACGGUCGACUCUAAu |||:: :||||||| uucuaaaUGCUGCUUGAGAUUg 2 16 221 242 [mm9:X:96661662-96661683:-] 0.6132 155 7 -16.04 -0.7640 MIMAT0000662 mmu-miR-216a 18744 Pja1 agugucaACGGUCGACUCUAAu |||:: :||||||| uucuaaaUGCUGCUUGAGAUUg 2 16 221 242 [mm9:X:96661662-96661683:-] 0.6132 155 7 -16.04 -0.6785 MIMAT0000679 mmu-miR-217 18744 Pja1 aggucagucaaggacuACGUCAu |||||| aaaugcugcuugagauUGCAGUa 2 8 225 247 [mm9:X:96661657-96661679:-] 0.6132 120 6 -14.52 -0.1209 MIMAT0000766 mmu-miR-335-5p 18744 Pja1 uguaaAAAGCAAUAACGA-GAACu |||| | | |||| |||| gaaacUUUC-UAAAUGCUGCUUGa 2 19 215 237 [mm9:X:96661667-96661689:-] 0.6132 124 0 -10.75 -0.8813 MIMAT0000766 mmu-miR-335-5p 18744 Pja1 uguaaAAAGCAAUAACGA-GAACu |||| | | |||| |||| gaaacUUUC-UAAAUGCUGCUUGa 2 19 215 237 [mm9:X:96661667-96661689:-] 0.6132 124 0 -10.75 -0.8004 MIMAT0003172 mmu-miR-542-3p 18744 Pja1 aaagucaauagUUAGACAGUgu || |||||| ugagaaaacagAAACUGUCAga 3 12 769 790 [mm9:X:96661114-96661135:-] 0.6011 127 0 -11.08 -0.2022 MIMAT0003730 mmu-miR-592 18744 Pja1 uguAGUAGCGUAU--AACUGUGUUa || || : |: ||||||||: aguUCUUCUUUUGCUUUGACACAGa 2 21 430 454 [mm9:X:96661450-96661474:-] 0.6679 139 0 -15.95 -0.2746 MIMAT0003453 mmu-miR-497 18744 Pja1 augUUUG-GUGUCACACGACGAc |||| : | ||||||| aggAAACUUUCUAAAUGCUGCUu 2 20 213 235 [mm9:X:96661669-96661691:-] 0.6132 142 7 -12.63 -0.5947 MIMAT0003453 mmu-miR-497 18744 Pja1 augUUUG-GUGUCACACGACGAc |||| : | ||||||| aggAAACUUUCUAAAUGCUGCUu 2 20 213 235 [mm9:X:96661669-96661691:-] 0.6132 142 7 -12.63 -0.5125 MIMAT0003475 mmu-miR-146b 18744 Pja1 ucggauaccuUAA-GUCAAGAGu ||| ||||||: guaaaagcuuAUUAAAGUUCUUc 2 13 415 437 [mm9:X:96661467-96661489:-] 0.6679 127 0 -13.23 -0.1674 MIMAT0003475 mmu-miR-146b 18744 Pja1 ucggauaccuUAA-GUCAAGAGu ||| ||||||: guaaaagcuuAUUAAAGUUCUUc 2 13 415 437 [mm9:X:96661467-96661489:-] 0.6679 127 0 -13.23 -0.1179 MIMAT0004896 mmu-miR-590-3p 18744 Pja1 ugaucgaauauguaUUUUAAu |||||| uaugucggaaagacAAAAUUa 2 8 349 369 [mm9:X:96661535-96661555:-] 0.6455 120 6 -3.82 -0.1500 MIMAT0004896 mmu-miR-590-3p 18744 Pja1 ugaucgaauauguaUUUUAAu |||||| uaugucggaaagacAAAAUUa 2 8 349 369 [mm9:X:96661535-96661555:-] 0.6455 120 6 -3.82 -0.1174 MIMAT0004936 mmu-miR-873 18744 Pja1 uccuCUGAGUGUUCAAGGACg |: |:| | ||||||| ucauGGGUUA-AUGUUCCUGu 2 18 383 402 [mm9:X:96661502-96661521:-] 0.6841 147 7 -15.05 -1.0783 MIMAT0004936 mmu-miR-873 18744 Pja1 uccuCUGAGUGUUCAAGGACg |: |:| | ||||||| ucauGGGUUA-AUGUUCCUGu 2 18 383 402 [mm9:X:96661502-96661521:-] 0.6841 147 7 -15.05 -1.0556

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G038066 Pja1 Mus musculus 18744

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Pja1 mmu-miR-1931 beg:505 end:523 pic:3' CGGTAGCGTGGTCGGGAACGTA 5'& ||.| ||||||||| &5' ---ATTGAT----CCCTTGCAT 3' Pja1 mmu-miR-467f beg:617 end:636 pic:3' ACATCCACACACACACATATA 5'& |||| ||||||| &5' --TAGGAATAAG-GTGTATA- 3' Pja1 mmu-miR-1907 beg:215 end:236 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& ||.|.| |||||||. &5' ACTTTCTAAA----TGCTGCTT 3' Pja1 mmu-miR-1941-5p beg:290 end:314 pic:3' TTCGGAGACATG-GTCGTAGAGGGA 5'& .|||||| | |..||||.|| &5' ----TTCTGTAGACTGTGTCTCTCT 3' Pja1 mmu-miR-1949 beg:396 end:418 pic:3' TTGATACGACTGTAGGACCATATC 5'& ||.| .| .|| ||||.|| &5' --CTGTATTTGCAG--TGGTGTA- 3' Pja1 mmu-miR-1951 beg:558 end:580 pic:3' ATCGGTGTGGTCAGAGGTGATG 5'& ||| ||.|||.|.||||| &5' TAGAAA-ACTAGTTTTCACTA- 3' Pja1 mmu-miR-1954 beg:286 end:301 pic:3' TTGTCCCAGAGTGAGACGTCA 5'& || .||||.|| &5' --------CTTGTTCTGTAG- 3' Pja1 mmu-miR-1970 beg:434 end:453 pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& .|| |. |. ||||||| &5' -----TCTTTTGCTT-TGACACA 3' Pja1 mmu-miR-1982.1 beg:735 end:752 pic:3' GACACCCTCTTGTAT-CCCACTCT 5'& |. || ||||||| &5' ---------AGTGTACGGGTGAG- 3' Pja1 mmu-miR-1983 beg:736 end:752 pic:3' TCTTTTGTACGAGGTCCACTC 5'& .||. |.|||||| &5' -------GTGTA-CGGGTGAG 3' Pja1 mmu-miR-2146 beg:58 end:78 pic:3' GTGTACCTTGGGAAGAGGTG 5'& .||| |||.||||| |.| &5' TACA-GGAGCCCTTGTTC-- 3' Pja1 mmu-miR-3471 beg:454 end:477 pic:3' TTACGGAATGTCAACCTAGAGT 5'& |||| | || ||||||.|. &5' AATGGCAT-CATTTGGATTTT- 3' Pja1 mmu-miR-466i beg:140 end:161 pic:3' ATCACACA--TACACACACACATA 5'& |||| ||| || |||||| &5' ---TGTGAAAATG-GT-TGTGTA- 3' Pja1 mmu-miR-599 beg:436 end:454 pic:3' CAAACTATTTGACTGTGTT 5'& |||| .|||||||. &5' -TTTGCT---TTGACACAG 3' Pja1 mmu-miR-1894-3p beg:501 end:521 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& |||| |.. |||||||| &5' CTCCAA--ATTGA-TCCCTTGC 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Pja1 RAID00001837 mmu-miR-146b-5p miRNA MIMAT0003475 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID00132648 mmu-miR-16-5p miRNA MIMAT0000527 Pja1 mRNA 18744 Prediction 0.2202 Pja1 RAID00319735 mmu-miR-335-5p miRNA MIMAT0000766 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID00418966 mmu-miR-15b-5p miRNA MIMAT0000124 Pja1 mRNA 18744 Prediction 0.2202 Pja1 RAID00441211 mmu-miR-100-5p miRNA MIMAT0000655 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID00544466 mmu-miR-137-3p miRNA MIMAT0000149 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID00764970 mmu-miR-297a-5p miRNA MIMAT0000375 Pja1 mRNA 18744 NGS (Next Generation Sequencing) 0.5483 Pja1 RAID00843442 mmu-miR-7649-5p miRNA MIMAT0029800 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID00845944 mmu-let-7g-3p miRNA MIMAT0004519 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID00872793 mmu-miR-217-5p miRNA MIMAT0000679 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID00922780 mmu-miR-873a-5p miRNA MIMAT0004936 Pja1 mRNA 18744 Prediction 0.2202 Pja1 RAID01126604 mmu-miR-592-5p miRNA MIMAT0003730 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID01208976 mmu-miR-6986-3p miRNA MIMAT0027875 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID01266835 mmu-miR-103-3p miRNA MIMAT0000546 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID01413752 mmu-miR-23b-3p miRNA MIMAT0000125 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID01564983 mmu-miR-322-5p miRNA MIMAT0000548 Pja1 mRNA 18744 Prediction 0.2202 Pja1 RAID01727562 mmu-miR-1a-3p miRNA MIMAT0000123 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID01728366 mmu-miR-3068-5p miRNA MIMAT0014842 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID01770610 mmu-miR-8103 miRNA MIMAT0031407 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID01804171 mmu-miR-15a-5p miRNA MIMAT0000526 Pja1 mRNA 18744 Prediction 0.2202 Pja1 RAID01894224 mmu-miR-717 miRNA MIMAT0003510 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02007708 mmu-miR-146a-5p miRNA MIMAT0000158 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02143636 mmu-miR-299a-3p miRNA MIMAT0004577 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02168662 mmu-miR-6240 miRNA MIMAT0024861 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02190869 mmu-miR-129-5p miRNA MIMAT0000209 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02191702 mmu-miR-99a-5p miRNA MIMAT0000131 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02204480 mmu-miR-497a-5p miRNA MIMAT0003453 Pja1 mRNA 18744 Prediction 0.2202 Pja1 RAID02234944 mmu-miR-186-5p miRNA MIMAT0000215 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02239237 mmu-miR-195b miRNA MIMAT0025076 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02252127 mmu-miR-206-3p miRNA MIMAT0000239 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02307089 mmu-miR-6342 miRNA MIMAT0025085 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02333833 mmu-miR-107-3p miRNA MIMAT0000647 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02369286 mmu-miR-542-3p miRNA MIMAT0003172 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02376556 mmu-miR-1912-3p miRNA MIMAT0014958 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02378480 mmu-miR-6419 miRNA MIMAT0025175 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02434405 mmu-miR-154-5p miRNA MIMAT0000164 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02556554 mmu-miR-29b-2-5p miRNA MIMAT0017063 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02810644 mmu-miR-216a-5p miRNA MIMAT0000662 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02870796 mmu-miR-6901-3p miRNA MIMAT0027703 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID02981580 mmu-miR-203-3p miRNA MIMAT0000236 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03134098 mmu-miR-7243-3p miRNA MIMAT0029911 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03186565 mmu-miR-9-5p miRNA MIMAT0000142 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03253022 mmu-miR-23a-3p miRNA MIMAT0000532 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03302455 mmu-miR-99b-5p miRNA MIMAT0000132 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03414083 mmu-miR-590-3p miRNA MIMAT0004896 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03532695 mmu-miR-6338 miRNA MIMAT0025081 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03589357 mmu-miR-125a-3p miRNA MIMAT0004528 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03633572 mmu-miR-6353 miRNA MIMAT0025096 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03636074 mmu-miR-19a-3p miRNA MIMAT0000651 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03704751 mmu-miR-1907 miRNA MIMAT0007876 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03776528 mmu-miR-200a-3p miRNA MIMAT0000519 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03829386 mmu-miR-141-3p miRNA MIMAT0000153 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03887824 mmu-miR-330-3p miRNA MIMAT0000569 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03950590 mmu-miR-7214-5p miRNA MIMAT0028396 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID03950700 mmu-miR-19b-3p miRNA MIMAT0000513 Pja1 mRNA 18744 Prediction 0.1828 Pja1 RAID04017116 mmu-miR-195a-5p miRNA MIMAT0000225 Pja1 mRNA 18744 Prediction 0.2202 Pja1 RAID04047027 mmu-miR-7673-5p miRNA MIMAT0029852 Pja1 mRNA 18744 Prediction 0.1828