SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs8278073 | snp | A/G | 0.124444 | 0.216185 | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | GRCm38.p3 | X:99465381 | CACATCTTCAAGTGG[A/G]TCATGCCAAATTGCT | 18744 |
rs8278074 | snp | A/G | 0.124444 | 0.216185 | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | GRCm38.p3 | X:99465344 | AGTGACTGCAGACTC[A/G]TCATTCAGAAANCCT | 18744 |
rs8278075 | snp | A/G | 0.124444 | 0.216185 | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | GRCm38.p3 | X:99465332 | CTCNTCATTCAGAAA[A/G]CCTCGCCATTAAGTC | 18744 |
rs8278076 | snp | A/C | 0.124444 | 0.216185 | missense | Pja1 | Mm_Celera | X:99467320 | TGGATGGCTGCCCTG[A/C]GCAGGAAGTACNGAA | 18744 |
rs8278077 | snp | A/C | 0.124444 | 0.216185 | synonymous-codon | Pja1 | Mm_Celera | X:99467308 | CTGNGCAGGAAGTAC[A/C]GAAGCCGAGAGCAAC | 18744 |
rs8278078 | snp | C/G | 0.124444 | 0.216185 | missense | Pja1 | Mm_Celera | X:99467227 | CTGGAACGTCAGCAA[C/G]CCGGAGCTGGGAGCC | 18744 |
rs8278079 | snp | C/T | 0.124444 | 0.216185 | missense | Pja1 | Mm_Celera | X:99467050 | GAGTCTACCCATGAG[C/T]TCATACAGCCTGGGA | 18744 |
rs8278080 | in-del | -/C | 0.124444 | 0.216185 | frameshift-variant | Pja1 | Mm_Celera | X:99466894 | GTGGATCCTCAGTTC[-/C]TCACCTACATGGCNC | 18744 |
rs8278081 | snp | C/T | 0.120708 | 0.213971 | synonymous-codon | Pja1 | Mm_Celera | X:99466880 | CNTCACCTACATGGC[C/T]CTNGAAGAGCGTCTG | 18744 |
rs8278082 | snp | A/G | 0.120708 | 0.213971 | synonymous-codon | Pja1 | GRCm38.p3 | X:99466877 | CACCTACATGGCNCT[A/G]GAAGAGCGTCTGGCC | 18744 |
rs8278083 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Pja1 | Mm_Celera | X:99467459 | CTTCGCTTGTTCACT[C/T]CTGGCATCCTGGTCT | 18744 |
rs8278084 | snp | A/G | 0.124444 | 0.216185 | synonymous-codon, intron-variant | Pja1 | Mm_Celera | X:99468011 | TCTCACTGGCAGTCG[A/G]TCAACAGGCCCAGCC | 18744 |
rs8278085 | snp | C/T | 0.231111 | 0.249285 | intron-variant, utr-variant-5-prime | Pja1 | Mm_Celera | X:99468421 | GACCCATGGCTCTGA[C/T]TCAGAGCTTCCAACA | 18744 |
rs8278086 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Pja1 | Mm_Celera | X:99468711 | GGGTGGGGCAAGAGG[C/T]GACTGACTACTTAGG | 18744 |
rs8278087 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Pja1 | Mm_Celera | X:99468718 | GCAAGAGGTGACTGA[C/T]TACTTAGGTAGGTAC | 18744 |
rs8278088 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Pja1 | Mm_Celera | X:99468742 | TAGGTACGCTATGGA[A/G]TTATGGGAAGAGTAA | 18744 |
rs16797830 | snp | C/T | 0.5 | 0 | utr-variant-3-prime, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99466131 | AAGCTTATTAAAGTT[C/T]TTNTTTTGCTTTGAC | 18744 |
rs16797831 | snp | C/T | 0.5 | 0 | utr-variant-3-prime, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99466128 | CTTATTAAAGTTNTT[C/T]TTTTGCTTTGACACA | 18744 |
rs16797832 | snp | A/G | 0.375 | 0.216506 | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465793 | ACAAATCACCTTTGA[A/G]AAAACANAAACTGTC | 18744 |
rs16797833 | snp | A/G | 0.375 | 0.216506 | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465786 | ACCTTTGANAAAACA[A/G]AAACTGTCAGAATGG | 18744 |
rs16797834 | snp | C/T | 0.117188 | 0.211804 | missense, intron-variant | Pja1 | Mm_Celera | X:99467724 | CCACCACCACAAATA[C/T]TCACAGGAGCCCTGC | 18744 |
rs29084737 | snp | C/T | 0.124444 | 0.216185 | missense | Pja1 | Mm_Celera | X:99467421 | TCTGCCATGGTTCGC[C/T]GCCGTCTTGGCACTT | 18744 |
rs29084738 | snp | A/C | 0.231111 | 0.249285 | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465686 | CTGCCGCACTACGCT[A/C]GCACATCCCTACTTG | 18744 |
rs31072695 | snp | C/T | 0.5 | 0 | intron-variant | Pja1 | GRCm38.p3 | X:99469989 | GTGTGTGTGTGTGTG[C/T]GCGCGCGCGAGCGCG | 18744 |
rs31270325 | snp | C/T | 0.5 | 0 | intron-variant | Pja1 | GRCm38.p3 | X:99469991 | GTGTGTGTGTGTGCG[C/T]GCGCGCGAGCGCGCA | 18744 |
rs31393302 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Pja1 | Mm_Celera | X:99470411 | GCCATGAAGGCCATT[C/T]GGCCCGAGGCCCACG | 18744 |
rs51503792 | snp | C/T | | | upstream-variant-2KB, utr-variant-5-prime | Pja1 | Mm_Celera | X:99470850 | AAGCGTCATTTCGTT[C/T]GAAACGCTGTGATTT | 18744 |
rs212819083 | in-del | -/TC | | | intron-variant | Pja1 | Mm_Celera | X:99469928 | ACTGCAAAGGAGGTT[-/TC]TCTGTGTGTGTGTGT | 18744 |
rs213310059 | snp | A/C | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472238 | TGGACCTCAGGCTCG[A/C]CTGGAACTTTCTAGG | 18744 |
rs214973404 | in-del | -/AC | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472134 | TGTCTCAAGAAGAAA[-/AC]AAAAAAGCATTTTTT | 18744 |
rs215194716 | snp | A/G | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471646 | GGAGAGTTCCAGCAT[A/G]GGCAATTTCTATTAC | 18744 |
rs215372357 | snp | C/T | | | intron-variant | Pja1 | Mm_Celera | X:99470114 | AGAGACAGGAATACG[C/T]TATCAGCTCAAAGGG | 18744 |
rs215479637 | snp | A/G | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471985 | GCGGTGGCAGAGGAG[A/G]CAGAGGCAGAAGAAC | 18744 |
rs215490435 | snp | A/C | | | intron-variant | Pja1 | Mm_Celera | X:99470001 | GTGTGTGTGCGCGCG[A/C]GCGCGCACGCGCGCC | 18744 |
rs215606498 | snp | A/T | | | utr-variant-3-prime, downstream-variant-500B | Pja1, Gm14808 | Mm_Celera | X:99466394 | AGGATGATTTTTTTT[A/T]AATGTCATTGTACAC | 18744 |
rs216319314 | in-del | -/A | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472131 | CTCTGTCTCAAGAAG[-/A]AAAAAAAAAGCATTT | 18744 |
rs217577989 | snp | A/G | | | intron-variant | Pja1 | GRCm38.p3 | X:99469543 | AGAGGTAGAGAGGGA[A/G]AGAGGAAGGGAGATG | 18744 |
rs219253985 | in-del | -/TA | | | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465871 | TGTGGGTTTTTTTTT[-/TA]AATTTCCCACGCTTT | 18744 |
rs220124376 | snp | C/T | | | upstream-variant-2KB, utr-variant-5-prime | Pja1 | Mm_Celera | X:99471067 | ATTACCTTACTATAT[C/T]ACATCCTATGTTACA | 18744 |
rs220278781 | snp | C/T | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472485 | AAATGAGGAAAGACA[C/T]GGGGAGACTGAACAA | 18744 |
rs220774732 | snp | G/T | | | intron-variant, utr-variant-5-prime | Pja1 | Mm_Celera | X:99468442 | GCTTCCAACAGAGCT[G/T]GGATGCAGGTGTAAG | 18744 |
rs220861435 | snp | C/T | | | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465597 | CAGTTACAGAGGAAG[C/T]CACCTGTGTGGGAGT | 18744 |
rs220946418 | snp | A/G | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472599 | ATTTCAAACAAGAAA[A/G]CATACAGTGTAAAAT | 18744 |
rs222451023 | in-del | -/A | | | upstream-variant-2KB, intron-variant | Pja1 | Mm_Celera | X:99470930 | AAAAACAGCTGCGAG[-/A]ACTGTAACCGCATTA | 18744 |
rs224867232 | in-del | -/AATCAATC | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471526 | AACCCTGTCTTGAAA[-/AATCAATC]AATCAATCAATCAAT | 18744 |
rs225561482 | snp | A/G | | | upstream-variant-2KB | Pja1 | GRCm38.p3 | X:99471693 | TCTAAGCGGGGGGGG[A/G]GGATATCGAACAAGG | 18744 |
rs225680264 | snp | C/T | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99473071 | CATCTTAGTATATGG[C/T]TCCTTGTATCCTTCT | 18744 |
rs226487012 | snp | A/C | | | intron-variant | Pja1 | Mm_Celera | X:99468890 | CCAGTGTTTGTCAGA[A/C]GAGAGACAGGTGACT | 18744 |
rs226715369 | in-del | -/GG | | | intron-variant | Pja1 | GRCm38.p3 | X:99469618 | AGAGAGGAAGAGAGA[-/GG]GGGGGAGAGAGAGAG | 18744 |
rs227008998 | snp | A/G | | | intron-variant | Pja1 | Mm_Celera | X:99469206 | GTGACGCTGGAACAC[A/G]GAGACCAGCAACCAA | 18744 |
rs227113714 | snp | A/G | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471274 | AGCACAGGTTCACAT[A/G]TTGTGAATTGCACCA | 18744 |
rs228372990 | snp | A/G | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471436 | AGAGGCGCAGAGGCA[A/G]AGGCAAAAAAACTTG | 18744 |
rs228806104 | snp | A/C | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472841 | TTAAAATTTTATGAA[A/C]TATTATCTTTGGAAA | 18744 |
rs230887311 | snp | A/G | | | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465921 | AACCATTTCTGTACA[A/G]CAAGCAATTATACAC | 18744 |
rs231663386 | snp | A/G | | | intron-variant | Pja1 | Mm_Celera | X:99470008 | TGCGCGCGAGCGCGC[A/G]CGCGCGCCTGTTTGC | 18744 |
rs232051573 | in-del | -/TG | | | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465640 | AGCATCGTGGCAAAC[-/TG]TTAAAAGTTTGCCCT | 18744 |
rs233468239 | snp | G/T | | | utr-variant-3-prime, downstream-variant-500B | Pja1, Gm14808 | Mm_Celera | X:99466508 | AGGGCTCCTGTAGTA[G/T]TGTGGGTTTCGGACA | 18744 |
rs234681811 | in-del | -/T | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472741 | CCTTAACATTTCCCC[-/T]TAAATAAGTAGCATT | 18744 |
rs234760811 | snp | C/T | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472361 | AGAAACCAAAAGAGG[C/T]AGAATAATCATAAAG | 18744 |
rs235233774 | snp | A/G | | | intron-variant | Pja1 | Mm_Celera | X:99470343 | CAAGAGCACTGCAAG[A/G]AGAGACAGGTAGGAG | 18744 |
rs235342390 | snp | C/G | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472099 | TTCCAGGATAGCCAG[C/G]GTTACAAAGAGGGAA | 18744 |
rs236696368 | in-del | -/T | | | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465956 | TCCTATTAAAGATGG[-/T]TTTTTTTTTGGTGTT | 18744 |
rs237479152 | snp | C/T | | | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465315 | AGAGAGGTTAAAGAC[C/T]TGACTTAATGGCGAG | 18744 |
rs237528005 | snp | G/T | | | intron-variant | Pja1 | Mm_Celera | X:99469741 | GAGCAGGAGGAGGGG[G/T]AGAGGTATTAGGGTC | 18744 |
rs238746805 | snp | A/G | | | upstream-variant-2KB, utr-variant-5-prime | Pja1 | Mm_Celera | X:99471194 | AAGGTGTTTACAGTG[A/G]AATCTGGTGCTGTTC | 18744 |
rs238866150 | snp | C/T | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472512 | ACAACAGTTAATAAG[C/T]TGGAGCTAACACATA | 18744 |
rs239197286 | snp | A/G | | | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465607 | GGAAGTCACCTGTGT[A/G]GGAGTTTTATGGATT | 18744 |
rs240245934 | in-del | -/C | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471445 | AGGCAAAGGCAAAAA[-/C]AACTTGAGTTCGAGG | 18744 |
rs240822238 | snp | A/C | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472912 | TAACTATTGAATGCT[A/C]TTGTGTCAAATATCT | 18744 |
rs241181866 | in-del | -/ACACACAC | | | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465477 | TGTACACGTACACAT[-/ACACACAC]ACACACACACACACA | 18744 |
rs241638926 | snp | A/G | | | intron-variant, utr-variant-5-prime | Pja1 | Mm_Celera | X:99468546 | CAGGGACCCTTTCAA[A/G]TTAGTTTCACTGTCT | 18744 |
rs243727106 | in-del | -/C | | | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465282 | TGGTGTGTTCATTGA[-/C]CCCCCTCACTGAATG | 18744 |
rs244105007 | snp | G/T | | | intron-variant, missense | Pja1 | Mm_Celera | X:99468395 | GGGCCGAACAGGCTT[G/T]CTAGGTCCCTGACCC | 18744 |
rs244419247 | in-del | -/AATCAATCAATCAATC | | | upstream-variant-2KB | Pja1 | GRCm38.p3 | X:99471525 | AACCCTGTCTTGAAA[-/AATCAATCAATCAATC]AATCAATCAATCAAT | 18744 |
rs244747454 | snp | A/G | | | intron-variant | Pja1 | Mm_Celera | X:99469145 | AGAGTCACTCCAGAA[A/G]GGAGCCAACAATGGA | 18744 |
rs244822725 | snp | A/G | | | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465992 | GAGCATTTCTAGTGA[A/G]AACTAGTTTTCTACA | 18744 |
rs244926165 | in-del | -/AGAGAGAGGGGGGGAG | | | intron-variant | Pja1 | GRCm38.p3 | X:99469611 | GGGAGAGAGAGAGGA[-/AGAGAGAGGGGGGGAG]AGAGAGAGGGGGAGA | 18744 |
rs244999056 | snp | C/T | | | upstream-variant-2KB, intron-variant | Pja1 | Mm_Celera | X:99470967 | GTTAAACATTTGCCA[C/T]CTTCCTTTCCGTTGT | 18744 |
rs246244907 | snp | A/G | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471727 | CAAGAAACAAGGAGA[A/G]GGTGGGCGAGAACAA | 18744 |
rs246727768 | in-del | -/AG | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471892 | ATGAGGCAGAGAGGC[-/AG]AGAGGCAGAGGCAGA | 18744 |
rs246997562 | in-del | -/CGCA | | | intron-variant | Pja1 | Mm_Celera | X:99469996 | GTGTGTGTGTGTGCG[-/CGCA]CGCGAGCGCGCACGC | 18744 |
rs248156112 | snp | A/T | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471289 | GTTGTGAATTGCACC[A/T]CATTTTTAAAATATC | 18744 |
rs248497767 | snp | A/G | | | intron-variant | Pja1 | Mm_Celera | X:99469261 | GCAAGCAGGAAAGGG[A/G]GTTAGTGTCCCCAGA | 18744 |
rs249109630 | snp | A/G | | | synonymous-codon | Pja1 | Mm_Celera | X:99466703 | CACATATTCGCTGCA[A/G]CAGATAGGACAGCAC | 18744 |
rs249508507 | snp | C/T | | | intron-variant | Pja1 | Mm_Celera | X:99469854 | GTGCTTGCCTGTTGG[C/T]GTACGCATGCGCAGA | 18744 |
rs250077654 | in-del | -/GGA | | | intron-variant | Pja1 | GRCm38.p3 | X:99469578 | GGAGCGAGAGGGGAG[-/GGA]GAGAGGGAGGGGGAG | 18744 |
rs250391256 | in-del | -/T | | | upstream-variant-2KB, intron-variant | Pja1 | Mm_Celera | X:99470999 | TTGTTGTTGTTGTTG[-/T]TTTTTAATAAAATAA | 18744 |
rs250924737 | snp | C/T | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472632 | CTATTGGAATTCATC[C/T]GTCACACAGAGCAAC | 18744 |
rs251795059 | in-del | -/G | | | intron-variant | Pja1 | Mm_Celera | X:99468781 | GGAGGATTTTGTGTT[-/G]GGGGGGGAGTCATTT | 18744 |
rs252064437 | snp | G/T | | | intron-variant | Pja1 | Mm_Celera | X:99470020 | CGCACGCGCGCCTGT[G/T]TGCGCGTGCCCGTGT | 18744 |
rs252913048 | in-del | -/TT | | | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465862 | TTGTTTCTCTGTGGG[-/TT]TTTTTTTTAAATTTC | 18744 |
rs253279973 | snp | A/G | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99471573 | ATTCGAACCAAAAAG[A/G]TCACAGACGAGCTTT | 18744 |
rs253479004 | snp | A/G | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472594 | TACTCATTTCAAACA[A/G]GAAAACATACAGTGT | 18744 |
rs253644935 | in-del | -/GTTTT | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472557 | TCAGGAGGATTCAGG[-/GTTTT]GTTTTGTTTTATAAA | 18744 |
rs254043799 | snp | A/T | | | utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465872 | GTGGGTTTTTTTTTT[A/T]AATTTCCCACGCTTT | 18744 |
rs255472228 | snp | C/G | | | upstream-variant-2KB, intron-variant | Pja1 | Mm_Celera | X:99471018 | TTAATAAAATAAAAT[C/G]CGAAGATTCTGATTA | 18744 |
rs256347435 | in-del | -/TG | | | intron-variant | Pja1 | Mm_Celera | X:99469931 | TGCAAAGGAGGTTTC[-/TG]TGTGTGTGTGTGTGT | 18744 |
rs256711245 | snp | C/T | | | upstream-variant-2KB | Pja1 | Mm_Celera | X:99472999 | ATTTATGTCTCTCTT[C/T]CCCTACTAATGGATT | 18744 |
rs257853412 | in-del | -/GGGT | | | upstream-variant-2KB | Pja1 | GRCm38.p3 | X:99471688 | GAAATCTAAGCGGGG[-/GGGT]GGGGGGGATATCGAA | 18744 |
rs258165650 | snp | C/G | | | intron-variant, downstream-variant-500B, nc-transcript-variant | Pja1, Gm14808 | Mm_Celera | X:99465533 | AGAGATCTAGACAAA[C/G]AGTAAATACAATACT | 18744 |